Csa6G152950.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAAGAACGAAAGAACGAAAGAGAAGAGCGAAGGCAAGAAAGGAAATTGTCTGGAACTTTCTTCCAGACCCAAAAGGAATCTCCAAAACAACTCACAACCGCCCTTCTCCCTCTTGTCGCTTCTTCTCATTTTCTTCCTTTATAATTCTCTACCAGATTCCTTCTTTCTTTCTTCCTTCATACCTATATCGCTTCTTCAATTTCTATATTCACTTTCCTCCCTCCATTCAATCATCGCAACACAGGTAATTTCATGATTACTCTCTTTCACTCTTTTTTTTTTTTTTTCTTCTTCTTCTTCTTCTTTTTTCCATGTCTTCTCCTTCGTGTTTCTGATCTGTTTGTTTTTAGATTTTGTTATTTTAGGTATTGTTGTTTTAATTATCAATCCATGGCTGAAGAACATAGATGCCAAGCGCCCAAGCTTTGTGCGAACAATTGCGGGTTCTTTGGCAGTCCCGCCACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTAGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGGAAGCGAAGGAACAACGCGTGGAGGAGGAAGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAACAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGGGAGAAACTGCAGAAGATTTGAGGGAAGGAAATTAAAGGGGGTAAAATTGTCTTATTTTTCTTCATCTTGGTTTGGTATATGTCTCTTTCGTGTGGTAAGGGCCAGCGCGTGGCGCGGGACCTGGTGGAGCATTTCGAAAAATATTGGTGGGTTGGTTG ATGGCTGAAGAACATAGATGCCAAGCGCCCAAGCTTTGTGCGAACAATTGCGGGTTCTTTGGCAGTCCCGCCACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTAGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGGAAGCGAAGGAACAACGCGTGGAGGAGGAAGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAACAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGGGAGAAACTGCAGAAGATTTGA ATGGCTGAAGAACATAGATGCCAAGCGCCCAAGCTTTGTGCGAACAATTGCGGGTTCTTTGGCAGTCCCGCCACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTAGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGGAAGCGAAGGAACAACGCGTGGAGGAGGAAGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAACAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGGGAGAAACTGCAGAAGATTTGA MAEEHRCQAPKLCANNCGFFGSPATRDFCSKCYRDLQLKEQQSSTAKLALNQTLAASLLLNPEPEAKEQRVEEEEEVRTEVVRTAAAEERQQQQPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVVKGEKLQKI*
BLAST of Csa6G152950.1 vs. Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 3.5e-50 Identity = 98/166 (59.04%), Postives = 120/166 (72.29%), Query Frame = 1
BLAST of Csa6G152950.1 vs. Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2) HSP 1 Score: 182.2 bits (461), Expect = 4.5e-45 Identity = 90/173 (52.02%), Postives = 111/173 (64.16%), Query Frame = 1
BLAST of Csa6G152950.1 vs. Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 7.9e-42 Identity = 84/163 (51.53%), Postives = 106/163 (65.03%), Query Frame = 1
BLAST of Csa6G152950.1 vs. Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 8.4e-36 Identity = 76/157 (48.41%), Postives = 94/157 (59.87%), Query Frame = 1
BLAST of Csa6G152950.1 vs. Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 3.2e-35 Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TrEMBL
Match: A0A0A0KB65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G152950 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 7.3e-87 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TrEMBL
Match: V7BZK7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G125000g PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 3.3e-55 Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TrEMBL
Match: A0A0L9UNE6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g169200 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 4.8e-54 Identity = 104/157 (66.24%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TrEMBL
Match: I1LTU6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G183800 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 4.8e-54 Identity = 105/160 (65.62%), Postives = 122/160 (76.25%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TrEMBL
Match: A0A0S3SGS2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G072700 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 4.8e-54 Identity = 104/157 (66.24%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TAIR10
Match: AT2G27580.1 (AT2G27580.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 199.1 bits (505), Expect = 2.0e-51 Identity = 98/166 (59.04%), Postives = 120/166 (72.29%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TAIR10
Match: AT3G52800.1 (AT3G52800.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 182.2 bits (461), Expect = 2.5e-46 Identity = 90/173 (52.02%), Postives = 111/173 (64.16%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TAIR10
Match: AT2G36320.1 (AT2G36320.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 171.4 bits (433), Expect = 4.4e-43 Identity = 84/163 (51.53%), Postives = 106/163 (65.03%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TAIR10
Match: AT4G12040.1 (AT4G12040.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 149.4 bits (376), Expect = 1.8e-36 Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 1
BLAST of Csa6G152950.1 vs. TAIR10
Match: AT1G12440.1 (AT1G12440.1 A20/AN1-like zinc finger family protein) HSP 1 Score: 147.9 bits (372), Expect = 5.3e-36 Identity = 67/161 (41.61%), Postives = 100/161 (62.11%), Query Frame = 1
BLAST of Csa6G152950.1 vs. NCBI nr
Match: gi|449463078|ref|XP_004149261.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis sativus]) HSP 1 Score: 327.8 bits (839), Expect = 1.1e-86 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of Csa6G152950.1 vs. NCBI nr
Match: gi|659117390|ref|XP_008458577.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis melo]) HSP 1 Score: 292.0 bits (746), Expect = 6.4e-76 Identity = 148/167 (88.62%), Postives = 151/167 (90.42%), Query Frame = 1
BLAST of Csa6G152950.1 vs. NCBI nr
Match: gi|593699234|ref|XP_007150082.1| (hypothetical protein PHAVU_005G125000g [Phaseolus vulgaris]) HSP 1 Score: 222.6 bits (566), Expect = 4.8e-55 Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 1
BLAST of Csa6G152950.1 vs. NCBI nr
Match: gi|950957142|ref|XP_014496999.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Vigna radiata var. radiata]) HSP 1 Score: 221.9 bits (564), Expect = 8.1e-55 Identity = 105/157 (66.88%), Postives = 119/157 (75.80%), Query Frame = 1
BLAST of Csa6G152950.1 vs. NCBI nr
Match: gi|920700862|gb|KOM44087.1| (hypothetical protein LR48_Vigan05g169200 [Vigna angularis]) HSP 1 Score: 218.8 bits (556), Expect = 6.9e-54 Identity = 104/157 (66.24%), Postives = 118/157 (75.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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