Csa6G088100.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G088100.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Gb\|AAD10670.1
Location	Chr6 : 6028419 .. 6029146 (+)
Sequence length	501

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCTCCCTCCCTCTCCTTTATCAATTACTAAACTAATTTATCAGCCTGGCTTCTGGGGGTTTATTTGTGAAATTACTAAAACATAGGGATTGGGCGTGGAAATTTTTGGAAGGGGTTTTTATTTTTATATTTTGCTATTATTTTTATTATTTGCTGACGTGGCATGCATTGTGGGGGAGTAGTAGTAGTAGGTTTAGGTTAAGAAGAGAGAAGAAGATTTGAAGGATGATGAATAGTAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATGACGTCACCTAGGCCCAACAACAAGAGGAAAGAAAGAGAGGGCCTTGATTATGATGATGATGATGATGAGGCCCACCAACTGCCATTGACGGCTAAAGTACCCAAGCCGACGCCGACGCCGCATTCCAAGCAGCTCCTTGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGAACGCTCTTCGGTCAGACTTGGGATAATCCAGATCCGGCTGCTAATGCTAACGCTAACGCTATGGCTTCTTCCTCTTCTTCCTTTTCTTCCTTTTCTTCTTCTCCTCCACTCACTACAGAGCCTCAAGAGAAGCGCCAAGCCGAAGCCCAATTACACCACCCAAAGAAGAATTACCAATCCTACGTGGAGGTGGCTAATTTGTTGAAACACAATGGGCCCCACCTTGAAGGTATTGTAAATCCCACCCAGCTAGCTCGCTTCCTTAACCTATGA

mRNA sequence

ATGATGAATAGTAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATGACGTCACCTAGGCCCAACAACAAGAGGAAAGAAAGAGAGGGCCTTGATTATGATGATGATGATGATGAGGCCCACCAACTGCCATTGACGGCTAAAGTACCCAAGCCGACGCCGACGCCGCATTCCAAGCAGCTCCTTGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGAACGCTCTTCGGTCAGACTTGGGATAATCCAGATCCGGCTGCTAATGCTAACGCTAACGCTATGGCTTCTTCCTCTTCTTCCTTTTCTTCCTTTTCTTCTTCTCCTCCACTCACTACAGAGCCTCAAGAGAAGCGCCAAGCCGAAGCCCAATTACACCACCCAAAGAAGAATTACCAATCCTACGTGGAGGTGGCTAATTTGTTGAAACACAATGGGCCCCACCTTGAAGGTATTGTAAATCCCACCCAGCTAGCTCGCTTCCTTAACCTATGA

Coding sequence (CDS)

ATGATGAATAGTAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATGACGTCACCTAGGCCCAACAACAAGAGGAAAGAAAGAGAGGGCCTTGATTATGATGATGATGATGATGAGGCCCACCAACTGCCATTGACGGCTAAAGTACCCAAGCCGACGCCGACGCCGCATTCCAAGCAGCTCCTTGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGAACGCTCTTCGGTCAGACTTGGGATAATCCAGATCCGGCTGCTAATGCTAACGCTAACGCTATGGCTTCTTCCTCTTCTTCCTTTTCTTCCTTTTCTTCTTCTCCTCCACTCACTACAGAGCCTCAAGAGAAGCGCCAAGCCGAAGCCCAATTACACCACCCAAAGAAGAATTACCAATCCTACGTGGAGGTGGCTAATTTGTTGAAACACAATGGGCCCCACCTTGAAGGTATTGTAAATCCCACCCAGCTAGCTCGCTTCCTTAACCTATGA

Protein sequence

MMNSNTTKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHSKQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEKRQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL*

Homology

[Close]

BLAST of Csa6G088100.1 vs. TrEMBL
Match: A0A0A0KDC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088100 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-91
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


Query: 1   MMNSNTTKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHS 60
           MMNSNTTKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHS
Sbjct: 1   MMNSNTTKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHS 60

Query: 61  KQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEK 120
           KQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEK
Sbjct: 61  KQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEK 120

Query: 121 RQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
           RQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL
Sbjct: 121 RQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 166

[Close]

BLAST of Csa6G088100.1 vs. TrEMBL
Match: A0A0D2N9W4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G255300 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.0e-27
Identity = 82/162 (50.62%), Postives = 94/162 (58.02%), Query Frame = 1


Query: 7   TKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPH--SKQLL 66
           TKTMRLPPRR+  S  PNNKRKER+G D          LP ++K P PT  P   S  LL
Sbjct: 3   TKTMRLPPRRVPDS-MPNNKRKERDGFDLKPQTS----LPPSSKPPMPTAPPPLLSNHLL 62

Query: 67  AGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEKRQAE 126
           AGYLAHEFLT GTLFGQ WD   P  +      A SS              EP ++  A 
Sbjct: 63  AGYLAHEFLTNGTLFGQPWDPTRPQQSP-----AESSKGIRE-------KAEPNDRSAAG 122

Query: 127 AQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
                PKK +Q YVEVA+LLK +G HL GIVNPTQL+RFL +
Sbjct: 123 DAEPKPKK-HQRYVEVASLLKTDGAHLPGIVNPTQLSRFLEM 146

[Close]

BLAST of Csa6G088100.1 vs. TrEMBL
Match: A0A067JRB3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17654 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-24
Identity = 81/169 (47.93%), Postives = 97/169 (57.40%), Query Frame = 1


Query: 7   TKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPT----------- 66
           TKTMRLPPRR +TS    NKRKEREG D           P T K+PKPT           
Sbjct: 3   TKTMRLPPRRFLTS----NKRKEREGFDSLKPSPPPPPAPPT-KLPKPTINRLDSGILPE 62

Query: 67  PTPHSKQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTT 126
           P P S QLLAGYLAHE+LTKGTLFGQ W      A + A A+  S+     F  S  +  
Sbjct: 63  PAP-SNQLLAGYLAHEYLTKGTLFGQPW------APSRAEAVPVSAG----FVESKKIKA 122

Query: 127 EPQEKRQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFL 165
             + K   EA+ +  K+ Y+ YV+V+ LLK  G HL G+VNP+QLARFL
Sbjct: 123 SQKAK---EAEPNSNKETYERYVDVSCLLKAGGAHLPGVVNPSQLARFL 152

[Close]

BLAST of Csa6G088100.1 vs. TrEMBL
Match: A0A0D2R8Y0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G221900 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-23
Identity = 79/171 (46.20%), Postives = 93/171 (54.39%), Query Frame = 1


Query: 7   TKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPH------- 66
           TKTMRLPPRR+     PNNKRKER     DD D +    P   K+PKP  +         
Sbjct: 3   TKTMRLPPRRVSM---PNNKRKER-----DDFDIKRLNPPPLTKLPKPAVSLAGSEKAAS 62

Query: 67  ----SKQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTT 126
               S QLLAGYLAHEFLT GTLFGQTWD   P   +     A S       S+      
Sbjct: 63  QPGLSNQLLAGYLAHEFLTHGTLFGQTWDLARPQQTS-----AESRKRIGEDSA------ 122

Query: 127 EPQEKRQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
            P ++  AE +    K+  Q YVEVA+LLK +G H+ GI NPTQLARFL +
Sbjct: 123 -PNQRSDAEPKPREEKR--QRYVEVASLLKTDGAHIPGIANPTQLARFLQM 151

[Close]

BLAST of Csa6G088100.1 vs. TrEMBL
Match: I1LYN1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G125500 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-23
Identity = 75/168 (44.64%), Postives = 93/168 (55.36%), Query Frame = 1


Query: 7   TKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPT-PTPH------ 66
           TKTMRLPPRR++T   P+NKRKER   D   D  ++   P   K+PKP  P P       
Sbjct: 3   TKTMRLPPRRVLTPSGPSNKRKER---DEPFDRPKSIPAPPINKLPKPDKPIPWPISEPK 62

Query: 67  -SKQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQ 126
            S QLLAGYLAHEFLTKGTL GQ W  P   ++A+           ++ +++      P 
Sbjct: 63  PSNQLLAGYLAHEFLTKGTLLGQPWAPPKGKSSASTEDGGEEGEPTTTAATA---AATPC 122

Query: 127 EKRQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
            K  AE +        + Y EVA LLK  G H  G+VNPTQLARFL+L
Sbjct: 123 RKTTAEER--------ERYAEVAGLLKGGGTHFPGVVNPTQLARFLHL 156

[Close]

BLAST of Csa6G088100.1 vs. TAIR10
Match: AT1G04000.1 (AT1G04000.1 unknown protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 73/181 (40.33%), Postives = 88/181 (48.62%), Query Frame = 1


Query: 7   TKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTP-------TPH 66
           TKTMRLPPRR++T+    +KRKER+       D+     P  AK P P P        P 
Sbjct: 3   TKTMRLPPRRVLTA----DKRKERDAFISSVTDNP----PEIAKFPSPPPKLVPPPVNPI 62

Query: 67  SKQ--------------LLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFS 126
           SK+              +LAGYL+HE+LT+GTLFG+ W+         A A A SS    
Sbjct: 63  SKKSSTAAAEPIGSNQLMLAGYLSHEYLTQGTLFGEQWNQ--------ARAQAESSKIKP 122

Query: 127 SFSSSPPLTTEPQEKRQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLN 167
           S +  P    EP+ KR               Y EVANLL+ +G  L GIVNP QLARFL 
Sbjct: 123 SHTVEPAEECEPKRKR---------------YREVANLLRSDGAQLPGIVNPAQLARFLK 152

[Close]

BLAST of Csa6G088100.1 vs. TAIR10
Match: AT5G44060.1 (AT5G44060.1 unknown protein)

HSP 1 Score: 95.5 bits (236), Expect = 3.3e-20
Identity = 68/168 (40.48%), Postives = 87/168 (51.79%), Query Frame = 1


Query: 7   TKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPH------- 66
           TKTMRLPPRR+ TS     K+ E   ++      ++  +  T  +P+PT T         
Sbjct: 3   TKTMRLPPRRV-TSGAVAGKQTESAVINPPPPPTKSI-VKKTPIIPRPTTTATVALAEPV 62

Query: 67  -SKQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQ 126
            S QLLAGYLAHEFL  GTLFG+ W NP       A A   ++ S     + P    EP 
Sbjct: 63  CSNQLLAGYLAHEFLNNGTLFGELW-NP-----TKAQAGPLTTQSIDPRKNKPSHDIEPS 122

Query: 127 EKRQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
           + ++            + YVEVAN+L+ +G HL GIVNP+QLARFL L
Sbjct: 123 DHKR------------RRYVEVANILRVDGTHLPGIVNPSQLARFLKL 150

[Close]

BLAST of Csa6G088100.1 vs. TAIR10
Match: AT3G23440.1 (AT3G23440.1 embryo sac development arrest 6)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 1


Query: 63  LLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTT-EPQEKR 122
           LLAGY+AHE+LT GT+ G+                      +S ++   PL +  P + R
Sbjct: 31  LLAGYMAHEYLTCGTMLGR--------------------KLYSGWAEVGPLVSPSPLQSR 90

Query: 123 QAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
           +        KK  QSY EVA++ K +G H+ G+VNPTQLA+++ +
Sbjct: 91  EV-------KKARQSYSEVASVFKTDGNHVPGVVNPTQLAKWIQM 108

[Close]

BLAST of Csa6G088100.1 vs. NCBI nr
Match: gi|778711659|ref|XP_011656778.1| (PREDICTED: uncharacterized protein LOC105435768 [Cucumis sativus])

HSP 1 Score: 343.6 bits (880), Expect = 2.0e-91
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


Query: 1   MMNSNTTKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHS 60
           MMNSNTTKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHS
Sbjct: 1   MMNSNTTKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHS 60

Query: 61  KQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEK 120
           KQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEK
Sbjct: 61  KQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEK 120

Query: 121 RQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
           RQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL
Sbjct: 121 RQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 166

[Close]

BLAST of Csa6G088100.1 vs. NCBI nr
Match: gi|659119983|ref|XP_008459949.1| (PREDICTED: uncharacterized protein LOC103498915 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-60
Identity = 135/175 (77.14%), Postives = 143/175 (81.71%), Query Frame = 1


Query: 1   MMNSNTTKTMRLPPRRLMTSPRP-----NNKRKEREGLDYD---DDDDEAHQLPLTAKVP 60
           MMNSNTTKTMRLPPRRLMTSPRP     NNKRKEREGLD D   DDD+ AHQL  TAKVP
Sbjct: 1   MMNSNTTKTMRLPPRRLMTSPRPNNNNNNNKRKEREGLDDDDHHDDDEAAHQLSFTAKVP 60

Query: 61  KPTPTPHSKQLLAGYLAHEFLTKGTLFGQTWD-NPDPAANANANAMASSSSSFSSFSSSP 120
            P   PHSKQLLAGYLAHEFLTKGTLFGQTWD NPDPAA ANA AM SSSS +  +S + 
Sbjct: 61  TP---PHSKQLLAGYLAHEFLTKGTLFGQTWDNNPDPAA-ANAIAMPSSSSCYYYYSLT- 120

Query: 121 PLTTEPQEKRQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
             TTE QEKRQA+A+LHH  KNYQSYVEVANLLKH+G HL+GIVNPTQLAR LNL
Sbjct: 121 --TTEAQEKRQAQAELHH-HKNYQSYVEVANLLKHSGSHLQGIVNPTQLARLLNL 167

[Close]

BLAST of Csa6G088100.1 vs. NCBI nr
Match: gi|823128491|ref|XP_012443021.1| (PREDICTED: uncharacterized protein LOC105767949 [Gossypium raimondii])

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26
Identity = 82/162 (50.62%), Postives = 94/162 (58.02%), Query Frame = 1


Query: 7   TKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPH--SKQLL 66
           TKTMRLPPRR+  S  PNNKRKER+G D          LP ++K P PT  P   S  LL
Sbjct: 3   TKTMRLPPRRVPDS-MPNNKRKERDGFDLKPQTS----LPPSSKPPMPTAPPPLLSNHLL 62

Query: 67  AGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTTEPQEKRQAE 126
           AGYLAHEFLT GTLFGQ WD   P  +      A SS              EP ++  A 
Sbjct: 63  AGYLAHEFLTNGTLFGQPWDPTRPQQSP-----AESSKGIRE-------KAEPNDRSAAG 122

Query: 127 AQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
                PKK +Q YVEVA+LLK +G HL GIVNPTQL+RFL +
Sbjct: 123 DAEPKPKK-HQRYVEVASLLKTDGAHLPGIVNPTQLSRFLEM 146

[Close]

BLAST of Csa6G088100.1 vs. NCBI nr
Match: gi|802717202|ref|XP_012085268.1| (PREDICTED: uncharacterized protein LOC105644503 [Jatropha curcas])

HSP 1 Score: 119.8 bits (299), Expect = 4.6e-24
Identity = 81/169 (47.93%), Postives = 97/169 (57.40%), Query Frame = 1


Query: 7   TKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPT----------- 66
           TKTMRLPPRR +TS    NKRKEREG D           P T K+PKPT           
Sbjct: 3   TKTMRLPPRRFLTS----NKRKEREGFDSLKPSPPPPPAPPT-KLPKPTINRLDSGILPE 62

Query: 67  PTPHSKQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTT 126
           P P S QLLAGYLAHE+LTKGTLFGQ W      A + A A+  S+     F  S  +  
Sbjct: 63  PAP-SNQLLAGYLAHEYLTKGTLFGQPW------APSRAEAVPVSAG----FVESKKIKA 122

Query: 127 EPQEKRQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFL 165
             + K   EA+ +  K+ Y+ YV+V+ LLK  G HL G+VNP+QLARFL
Sbjct: 123 SQKAK---EAEPNSNKETYERYVDVSCLLKAGGAHLPGVVNPSQLARFL 152

[Close]

BLAST of Csa6G088100.1 vs. NCBI nr
Match: gi|823152904|ref|XP_012476288.1| (PREDICTED: uncharacterized protein LOC105792318 [Gossypium raimondii])

HSP 1 Score: 116.7 bits (291), Expect = 3.9e-23
Identity = 79/171 (46.20%), Postives = 93/171 (54.39%), Query Frame = 1


Query: 7   TKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPH------- 66
           TKTMRLPPRR+     PNNKRKER     DD D +    P   K+PKP  +         
Sbjct: 3   TKTMRLPPRRVSM---PNNKRKER-----DDFDIKRLNPPPLTKLPKPAVSLAGSEKAAS 62

Query: 67  ----SKQLLAGYLAHEFLTKGTLFGQTWDNPDPAANANANAMASSSSSFSSFSSSPPLTT 126
               S QLLAGYLAHEFLT GTLFGQTWD   P   +     A S       S+      
Sbjct: 63  QPGLSNQLLAGYLAHEFLTHGTLFGQTWDLARPQQTS-----AESRKRIGEDSA------ 122

Query: 127 EPQEKRQAEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 167
            P ++  AE +    K+  Q YVEVA+LLK +G H+ GI NPTQLARFL +
Sbjct: 123 -PNQRSDAEPKPREEKR--QRYVEVASLLKTDGAHIPGIANPTQLARFLQM 151

The following BLAST results are available for this feature:

BLAST of Csa6G088100.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDC0_CUCSA	1.4e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088100 PE=4 SV=1	[more]
A0A0D2N9W4_GOSRA	9.0e-27	50.62	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G255300 PE=4 SV=1	[more]
A0A067JRB3_JATCU	3.2e-24	47.93	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17654 PE=4 SV=1	[more]
A0A0D2R8Y0_GOSRA	2.7e-23	46.20	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G221900 PE=4 SV=1	[more]
I1LYN1_SOYBN	3.5e-23	44.64	Uncharacterized protein OS=Glycine max GN=GLYMA_13G125500 PE=4 SV=1	[more]

BLAST of Csa6G088100.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04000.1	1.3e-21	40.33	unknown protein	[more]
AT5G44060.1	3.3e-20	40.48	unknown protein	[more]
AT3G23440.1	2.0e-09	35.24	embryo sac development arrest 6	[more]

BLAST of Csa6G088100.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778711659\|ref\|XP_011656778.1\|	2.0e-91	100.00	PREDICTED: uncharacterized protein LOC105435768 [Cucumis sativus]	[more]
gi\|659119983\|ref\|XP_008459949.1\|	2.3e-60	77.14	PREDICTED: uncharacterized protein LOC103498915 [Cucumis melo]	[more]
gi\|823128491\|ref\|XP_012443021.1\|	1.3e-26	50.62	PREDICTED: uncharacterized protein LOC105767949 [Gossypium raimondii]	[more]
gi\|802717202\|ref\|XP_012085268.1\|	4.6e-24	47.93	PREDICTED: uncharacterized protein LOC105644503 [Jatropha curcas]	[more]
gi\|823152904\|ref\|XP_012476288.1\|	3.9e-23	46.20	PREDICTED: uncharacterized protein LOC105792318 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G088100	Csa6G088100	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G088100.1	Csa6G088100.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G088100.1.utr5p1	Csa6G088100.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G088100.1.cds1	Csa6G088100.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34657	FAMILY NOT NAMED	coord: 6..166 score: 7.4
None	No IPR available	PANTHER	PTHR34657:SF2	F21M11.6 PROTEIN-RELATED	coord: 6..166 score: 7.4