Csa6G038510.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCATCACTCTCCCAACAAACGCCTCCGAGTCGACTCCCTCGACTCCGAATCCGACTCTCCCGAAGTCAAACGTCTCCGTGACGACCTCCTCGGCCTTCTCGATGACTCCGACCCCGACCCCACTGTCCAAGATCTCGATTCCCTTATCCAGAGTTTCGCCGACGAGATCTCCCCCGTCTCCTCTCCCCCGCCCCCTCCGGCCGCCCCCTCCGAGCTCGGTTACCTACTCCTGGCCTCCGATGACGAACTCGGTCTCCCACCCTCCCACGCCTCCACCAGCCACGGCGGCCAAACGGAGGTGGTTGAACTCGCGCGGGAGTCCTCGGACTCGTCTGGGATTGGACAGATTTGGGGATTTGAAGATGCGGTACCGAGTTATGAGACGCTGGAGTTGGTGGGGGATGGAGAGAGATTTTATAACGAAATGGAATATGTGGCGTTTGATGGACTGTTTGAACATTCCGATGTGTACTCTGTTTTTTCGTGA ATGGATCATCACTCTCCCAACAAACGCCTCCGAGTCGACTCCCTCGACTCCGAATCCGACTCTCCCGAAGTCAAACGTCTCCGTGACGACCTCCTCGGCCTTCTCGATGACTCCGACCCCGACCCCACTGTCCAAGATCTCGATTCCCTTATCCAGAGTTTCGCCGACGAGATCTCCCCCGTCTCCTCTCCCCCGCCCCCTCCGGCCGCCCCCTCCGAGCTCGGTTACCTACTCCTGGCCTCCGATGACGAACTCGGTCTCCCACCCTCCCACGCCTCCACCAGCCACGGCGGCCAAACGGAGGTGGTTGAACTCGCGCGGGAGTCCTCGGACTCGTCTGGGATTGGACAGATTTGGGGATTTGAAGATGCGGTACCGAGTTATGAGACGCTGGAGTTGGTGGGGGATGGAGAGAGATTTTATAACGAAATGGAATATGTGGCGTTTGATGGACTGTTTGAACATTCCGATGTGTACTCTGTTTTTTCGTGA ATGGATCATCACTCTCCCAACAAACGCCTCCGAGTCGACTCCCTCGACTCCGAATCCGACTCTCCCGAAGTCAAACGTCTCCGTGACGACCTCCTCGGCCTTCTCGATGACTCCGACCCCGACCCCACTGTCCAAGATCTCGATTCCCTTATCCAGAGTTTCGCCGACGAGATCTCCCCCGTCTCCTCTCCCCCGCCCCCTCCGGCCGCCCCCTCCGAGCTCGGTTACCTACTCCTGGCCTCCGATGACGAACTCGGTCTCCCACCCTCCCACGCCTCCACCAGCCACGGCGGCCAAACGGAGGTGGTTGAACTCGCGCGGGAGTCCTCGGACTCGTCTGGGATTGGACAGATTTGGGGATTTGAAGATGCGGTACCGAGTTATGAGACGCTGGAGTTGGTGGGGGATGGAGAGAGATTTTATAACGAAATGGAATATGTGGCGTTTGATGGACTGTTTGAACATTCCGATGTGTACTCTGTTTTTTCGTGA MDHHSPNKRLRVDSLDSESDSPEVKRLRDDLLGLLDDSDPDPTVQDLDSLIQSFADEISPVSSPPPPPAAPSELGYLLLASDDELGLPPSHASTSHGGQTEVVELARESSDSSGIGQIWGFEDAVPSYETLELVGDGERFYNEMEYVAFDGLFEHSDVYSVFS*
BLAST of Csa6G038510.1 vs. TrEMBL
Match: A0A0A0K873_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G038510 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 9.0e-88 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Csa6G038510.1 vs. TrEMBL
Match: A0A0A0KR57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608610 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 2.2e-33 Identity = 85/167 (50.90%), Postives = 109/167 (65.27%), Query Frame = 1
BLAST of Csa6G038510.1 vs. TrEMBL
Match: M5XHY5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010994mg PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 4.8e-33 Identity = 91/183 (49.73%), Postives = 114/183 (62.30%), Query Frame = 1
BLAST of Csa6G038510.1 vs. TrEMBL
Match: W9RXI0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014675 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 6.3e-33 Identity = 91/181 (50.28%), Postives = 112/181 (61.88%), Query Frame = 1
BLAST of Csa6G038510.1 vs. TrEMBL
Match: A0A151TPY1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_008287 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.4e-32 Identity = 84/153 (54.90%), Postives = 106/153 (69.28%), Query Frame = 1
BLAST of Csa6G038510.1 vs. TAIR10
Match: AT1G13360.1 (AT1G13360.1 unknown protein) HSP 1 Score: 133.3 bits (334), Expect = 1.4e-31 Identity = 83/165 (50.30%), Postives = 103/165 (62.42%), Query Frame = 1
BLAST of Csa6G038510.1 vs. TAIR10
Match: AT3G25870.1 (AT3G25870.1 unknown protein) HSP 1 Score: 105.5 bits (262), Expect = 3.1e-23 Identity = 71/158 (44.94%), Postives = 88/158 (55.70%), Query Frame = 1
BLAST of Csa6G038510.1 vs. NCBI nr
Match: gi|449465910|ref|XP_004150670.1| (PREDICTED: uncharacterized protein LOC101204892 [Cucumis sativus]) HSP 1 Score: 330.9 bits (847), Expect = 1.3e-87 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Csa6G038510.1 vs. NCBI nr
Match: gi|659089713|ref|XP_008445657.1| (PREDICTED: uncharacterized protein LOC103488614 [Cucumis melo]) HSP 1 Score: 311.6 bits (797), Expect = 8.1e-82 Identity = 153/163 (93.87%), Postives = 159/163 (97.55%), Query Frame = 1
BLAST of Csa6G038510.1 vs. NCBI nr
Match: gi|1009155212|ref|XP_015895591.1| (PREDICTED: uncharacterized protein LOC107429425 [Ziziphus jujuba]) HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35 Identity = 91/174 (52.30%), Postives = 114/174 (65.52%), Query Frame = 1
BLAST of Csa6G038510.1 vs. NCBI nr
Match: gi|659091520|ref|XP_008446589.1| (PREDICTED: uncharacterized protein LOC103489276 [Cucumis melo]) HSP 1 Score: 152.9 bits (385), Expect = 4.8e-34 Identity = 86/167 (51.50%), Postives = 110/167 (65.87%), Query Frame = 1
BLAST of Csa6G038510.1 vs. NCBI nr
Match: gi|645276296|ref|XP_008243220.1| (PREDICTED: uncharacterized protein LOC103341472 [Prunus mume]) HSP 1 Score: 152.1 bits (383), Expect = 8.2e-34 Identity = 92/182 (50.55%), Postives = 113/182 (62.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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