Csa6G017060.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G017060.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Farnesyl pyrophosphate synthase; contains IPR000092 (Polyprenyl synthetase)
Location	Chr6 : 2025240 .. 2028782 (-)
Sequence length	984

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAAAGCCGAGAGGAATAGAAAGAACCTCGCCTTCTCTCACTTAGTCCTACCAATTTGCAATTTCAACTGGCATATGAGAAGTTGCATTCCCAACATTTTCCATCCTTGAAATTCAATTTTCAAGCTACATCGATCCTTCATTCTTCTAGGTTTTCTTTTTCATTTCTCTATCTTCCTCTCTCTCTGTGTCTTCTTCATTTCTCTCTCTTCTATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAATCTGAGCTTCTTCAGGACCCTGCGTTTGAGTTTACGGATGCTTCTCGCCAATGGGTCGAACGGGTAACGTCTTTGATTCTTTTCCATTTCTCCTTCTGTTCTTCTGGGTTCTATGTGCTTCCTGTCTCCATTTTGTTTCTTCCTTTCCAATGCCAAACTCTAGAGGGATAATATTCTGCTTCTTCACTTTCTTCAGTTAATACGAGTAACACTTTTTTTTTTTTTTAATTCCACCAATTTACTTCTTAACTTCGCTCTTTACTTGATTACGATTAGCCAACTCATCTGAAAAGGCGAGTGCTCTCCATTACCGTGTGCCATTTTGAAATTGTTGGCCTAATTTTGTAATTGTGAGCTGTTTTATGAACTGCTAAAGGAACTAATGGAACGTGTTTCAGTCATGGTAGTCGTAGATTTGATTGTACAGTTAAGAAACCGAGAAATGAGGTCCTTAGATCTATATATTGTTTACATCGGTTAGCAATATAAGATTTACATGGTTTGAATGATGCGTTTCACTAGTCAAATTAATCGGGTCCACATTTGAGTGGGCTTAAACAAACGACACTTGATATACTATTCAGTCCAATCAGTTTCTGTCTTACTAGGCTTTTGGTCATCCATCGACATAGTTTCTAGTTAACTGTTGATTCTAGTTTATATTCCCATTTGTTTGCTGTTATCACGGTCCTTTACAGTTGATTCTAGTTTATATTCCCATTTGTTTATTGTTATCTCGGTCCTTTACAGATGCTGGACTACAATGTGCCTGGAGGTGGGAAATAATCATGCGAAAGATTCTGTTCATTGATCATATTATTGGACATGTCGGACTATTCATGGACATTTTTTATGAGGAAGTAAGCTAACTTCTAATGTGAAATCATTTTTCCTGCAGGTAAGCTTAACCGAGGGCTCTCGGTTATTGATAGCTATAGATTATTGAAAGAAGGGAAGGAGCTGACTGAAGACGAAATCTTTCTTACTAGTGTTCTTGGTTGGTGTATTGAATGGGTAAGATATAACTATATGATTCATTCTGTTGTCCTGCTTGGAGGATTGATAAACAAGATGATATCCACATCCTCATGAATTTTCTCAAATCTCTGCAGCTCCAGGCTTATTTTCTTGTTCTCGATGATATTATGGATAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTTTCTAGGAAACAATGTATAGCATTCTTCAATCTGTAACTGTTATTGCACTAACAGCTGAACAGTTCTAGGTTTTCTTGGTAGGTTGGGATGATTGCAGTAAACGATGGAGTTCTTCTTAGAAATCATATTCCTAGAATGCTCAAAAATCACTTCAAAGGGAAGCCATATTACGTTGATCTGCTCGATTTATTTAACGAGGTAGTTTCTTGGCAATGACTAACATGGGTTTATTCCAATCTTGATCTAATAACATGCTAACATTCACGTTTTTATGTTCAAATAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACCATCGAAGGAGAAAAAGATCTTTCCAAATATGCACTATCACTGTAAGTTTCAACTCTCAAAACCTTTTTCTGGTTTCTTTAATTGGGGCAATAAAGTCAAAACGGTATATGCCATACTATATGTGTGAAAGAACAAGTAAACCAGGAACATTTCAATCGTTTTCACTTTCATATATTATTTTGGGGTGCTTTCTAATGCACATATAATGTAACTTTTGTAGTCATCGGCGCATTGTACAGTACAAGACTGCCTATTATTCATTTTACCTTCCGGTGAGTAGCTTTTCCTTGCTCCACTTTAAGAAAGCAGTGTGTGTGAAGTGGTTGAAGAATTAGTAGCTTCTTTGGTGGCTTTGCATTATCCATTTTTATAAAATACATAGTGTGAAGTTTTATTCTGCAGATCATTTCTCTAATAAAATACTCAGTATTGTTTGTGATAGATTTGATTGACCGTGAGCTGTTTTTGTCATGATTGCAGGTTGCTTGTGCACTGGTTATGGCAGGTGAAGATCTTGAGAATCATATTGCAGTTAAGGACATTCTTGTTCAGATGGGTGTTTATTTTCAAGTTCAGGTATATTACCTTCACTTGAATGGTTGATTAATGATTCTGATTTTCTCTAGATTTCTTAGGGTTGAGGTCGCATTCACATTATCTGAACTACACTTAGGTTTTTTAAGAAATGTTTGTTTAAGCCGATGTTTGATTCAAAAACATTCTCTTAATCTTCTTTAACCACATCTTCAAACATAAATGCTTATCTGCTTTTAATCCGAGGATTTTAGCTTTTGTCTTCAAGAGGTGCAAGAATAAACTTCGCTCCATTTTCTCGAAGTTTTTTTTAATTCTTTTCTCAAGTAGAAAATTTTTCTTTTTGTGTGTGTTCTTTTAATCTCTTGTCATGTGACTTTGTGATAATGTGAACAGGATGATTATCTAGATTGTTTTGGCGATCCTGAAACCATAGGAAAGGTGAGTCATGCCCTGTTCTTGTTGAACTTTTCACTCCTTGCACGGTTCTGACAAATCTTTTATTCATGAAGTTCTTGAATCAACTGTTGTCAGGTGGGAACAGACATTGAAGATTTTAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAGCTATGCAACGACAATCAAAAGAAGTTATTACATGTAATTGTCACGTTTTAAATTCCTTGATTGTTTTCTCATCTGTCTTGCAAGAAGTTGCTTCATTTTTTTGTTTTACCAGGAGGCTTATGGGAAACCAGACCCAGAAAATGTGGCCAAAGTAAAGGCCATCTACAAGGATCTCGATCTTCAGGTCTGACCTTACATCATAAAAACTAAAACCTTACTCATTTTACAACAAGGAAAAATATGACGTTTTAAATTCCTTGTTTGTTTTCTATGCACATTAATCTTACCAGTTTCTTTGCAAAATTTTAGAAGAATCAGAGAAGGAAGTTAAAACACTTTTAATTTTTTATATTTAAGTACTTTTTTGCATACTTGCTGTGAATTACTCAAAAATTCAGCATCTAAATTATTGATGGAACCAAAAAACCAGGGTCGCAACTCCACAACTTCAGTCCTTTCTCTTTCAGTTACTTATTATAGTTTCCTTTGGGTAGGGTGTATTTGCAGAGTATGAGAGTCAGAGCTATGCTAAACTGAATGCCTCCATTGAAGCTCAACCCAGCAAAGCAATTCAAGCGGTTCTCAAGTCTTTCTTGGGTAAAATATACAAGCGCCAGAAGTGA

mRNA sequence

ATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAATCTGAGCTTCTTCAGGACCCTGCGTTTGAGTTTACGGATGCTTCTCGCCAATGGGTCGAACGGATGCTGGACTACAATGTGCCTGGAGGTAAGCTTAACCGAGGGCTCTCGGTTATTGATAGCTATAGATTATTGAAAGAAGGGAAGGAGCTGACTGAAGACGAAATCTTTCTTACTAGTGTTCTTGGTTGGTGTATTGAATGGCTCCAGGCTTATTTTCTTGTTCTCGATGATATTATGGATAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTGGGATGATTGCAGTAAACGATGGAGTTCTTCTTAGAAATCATATTCCTAGAATGCTCAAAAATCACTTCAAAGGGAAGCCATATTACGTTGATCTGCTCGATTTATTTAACGAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACCATCGAAGGAGAAAAAGATCTTTCCAAATATGCACTATCACTTCATCGGCGCATTGTACAGTACAAGACTGCCTATTATTCATTTTACCTTCCGGTTGCTTGTGCACTGGTTATGGCAGGTGAAGATCTTGAGAATCATATTGCAGTTAAGGACATTCTTGTTCAGATGGGTGTTTATTTTCAAGTTCAGGTGGGAACAGACATTGAAGATTTTAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAGCTATGCAACGACAATCAAAAGAAGTTATTACATGAGGCTTATGGGAAACCAGACCCAGAAAATGTGGCCAAAGTAAAGGCCATCTACAAGGATCTCGATCTTCAGGGTGTATTTGCAGAGTATGAGAGTCAGAGCTATGCTAAACTGAATGCCTCCATTGAAGCTCAACCCAGCAAAGCAATTCAAGCGGTTCTCAAGTCTTTCTTGGGTAAAATATACAAGCGCCAGAAGTGA

Coding sequence (CDS)

ATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAATCTGAGCTTCTTCAGGACCCTGCGTTTGAGTTTACGGATGCTTCTCGCCAATGGGTCGAACGGATGCTGGACTACAATGTGCCTGGAGGTAAGCTTAACCGAGGGCTCTCGGTTATTGATAGCTATAGATTATTGAAAGAAGGGAAGGAGCTGACTGAAGACGAAATCTTTCTTACTAGTGTTCTTGGTTGGTGTATTGAATGGCTCCAGGCTTATTTTCTTGTTCTCGATGATATTATGGATAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTGGGATGATTGCAGTAAACGATGGAGTTCTTCTTAGAAATCATATTCCTAGAATGCTCAAAAATCACTTCAAAGGGAAGCCATATTACGTTGATCTGCTCGATTTATTTAACGAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACCATCGAAGGAGAAAAAGATCTTTCCAAATATGCACTATCACTTCATCGGCGCATTGTACAGTACAAGACTGCCTATTATTCATTTTACCTTCCGGTTGCTTGTGCACTGGTTATGGCAGGTGAAGATCTTGAGAATCATATTGCAGTTAAGGACATTCTTGTTCAGATGGGTGTTTATTTTCAAGTTCAGGTGGGAACAGACATTGAAGATTTTAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAGCTATGCAACGACAATCAAAAGAAGTTATTACATGAGGCTTATGGGAAACCAGACCCAGAAAATGTGGCCAAAGTAAAGGCCATCTACAAGGATCTCGATCTTCAGGGTGTATTTGCAGAGTATGAGAGTCAGAGCTATGCTAAACTGAATGCCTCCATTGAAGCTCAACCCAGCAAAGCAATTCAAGCGGTTCTCAAGTCTTTCTTGGGTAAAATATACAAGCGCCAGAAGTGA

Protein sequence

MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRLLKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK*

Homology

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BLAST of Csa6G017060.1 vs. Swiss-Prot
Match: FPPS1_LUPAL (Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 9.6e-159
Identity = 277/342 (80.99%), Postives = 298/342 (87.13%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADL+STFL VYSVLKSELL DPAFEF+  SRQW++RMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLRSTFLNVYSVLKSELLHDPAFEFSPDSRQWLDRMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LK+G EL +DEIFL S LGWCIEWLQAYFLVLDDIMDNS TRRGQPCWFRVPKVGMIA N
Sbjct: 61  LKDGHELNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAAN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGVLLRNHIPR+LK HF+GKPYY DLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY L
Sbjct: 121 DGVLLRNHIPRILKKHFRGKPYYADLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
           SLHRRIVQYKTAYYSFYLPVACAL+M GE+L+NHI VK+ILV MG YFQVQ         
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHIDVKNILVDMGTYFQVQDDYLDCFGA 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 +GTDIEDFKCSWLVVKALEL ND QKK+L++ YGKPDP NVAKVKA+Y +L+LQ
Sbjct: 241 PETIGKIGTDIEDFKCSWLVVKALELSNDEQKKVLYDNYGKPDPANVAKVKALYDELNLQ 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           GVF EYES+SY KL  SIEA PSKA+QA+LKSFLGKIYKRQK
Sbjct: 301 GVFTEYESKSYEKLVTSIEAHPSKAVQALLKSFLGKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. Swiss-Prot
Match: FPPS2_LUPAL (Farnesyl pyrophosphate synthase 2 OS=Lupinus albus GN=FPS2 PE=2 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 2.7e-153
Identity = 266/342 (77.78%), Postives = 293/342 (85.67%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MAD KS+FL VYS+LKSELLQDPAFEF+  SRQWVERMLDYNVPGGKLNRGLSVIDSY+L
Sbjct: 1   MADPKSSFLNVYSILKSELLQDPAFEFSTDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LK+G+EL ++EIFL S LGWCIEWLQAYFLVLDDIMDNS TRRG PCWFRVPKVGMIA N
Sbjct: 61  LKDGQELNDEEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGHPCWFRVPKVGMIAPN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGV+LRNHIPR+LK HF+GKPYYVDLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY L
Sbjct: 121 DGVVLRNHIPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
           SLHRRIVQYKTAYYSFYLPVACAL+M GE+L+NH  VK+ILV+MG YFQVQ         
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHTDVKNILVEMGTYFQVQDDYLDCFGA 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 +GTDIEDFKCSWLVVKALEL N+ QKK+L+E YGKPDP NVAKVK +Y +L+L+
Sbjct: 241 PETIGKIGTDIEDFKCSWLVVKALELSNEEQKKVLYENYGKPDPANVAKVKTLYNELNLE 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           G +A+YES+SY KL   IE  PSKA+Q VLKSF  KIYKRQK
Sbjct: 301 GAYADYESKSYEKLVTCIEGHPSKAVQGVLKSFWAKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. Swiss-Prot
Match: FPPS1_ARATH (Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana GN=FPS1 PE=2 SV=2)

HSP 1 Score: 534.3 bits (1375), Expect = 9.6e-151
Identity = 258/340 (75.88%), Postives = 293/340 (86.18%), Query Frame = 1


Query: 3   DLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRLLK 62
           DLKSTFL VYSVLKS+LL DP+FEFT+ SR WV+RMLDYNV GGKLNRGLSV+DS++LLK
Sbjct: 45  DLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLK 104

Query: 63  EGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVNDG 122
           +G +LTE E+FL+  LGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVP+VGM+A+NDG
Sbjct: 105 QGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDG 164

Query: 123 VLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYALSL 182
           +LLRNHI R+LK HF+ KPYYVDL+DLFNEVE QTA GQMIDLITT EGEKDL+KY+LS+
Sbjct: 165 ILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLAKYSLSI 224

Query: 183 HRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ----------- 242
           HRRIVQYKTAYYSFYLPVACAL+MAGE+LENHI VK++LV MG+YFQVQ           
Sbjct: 225 HRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPE 284

Query: 243 ----VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGV 302
               +GTDIEDFKCSWLVVKALE C++ Q K+L+E YGKPDP NVAKVK +YK+LDL+GV
Sbjct: 285 TLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEGV 344

Query: 303 FAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           F EYES+SY KL  +IE   SKAIQAVLKSFL KIYKRQK
Sbjct: 345 FMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK 384

[Close]

BLAST of Csa6G017060.1 vs. Swiss-Prot
Match: FPPS2_ARATH (Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana GN=FPS2 PE=2 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 1.8e-149
Identity = 259/342 (75.73%), Postives = 289/342 (84.50%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKSTFL VYSVLKS+LLQDP+FEFT  SRQW+ERMLDYNV GGKLNRGLSV+DSY+L
Sbjct: 1   MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LK+G++LTE E FL+  LGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFR PKVGMIA+N
Sbjct: 61  LKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAIN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DG+LLRNHI R+LK HF+  PYYVDL+DLFNEVEFQTA GQMIDLITT +GEKDLSKY+L
Sbjct: 121 DGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYSL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
            +HRRIV+YKTAYYSFYLPVACAL+MAGE+LENH  VK +LV MG+YFQVQ         
Sbjct: 181 QIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFAD 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 +GTDIEDFKCSWLVVKALE C++ Q K+L+E YGK +P NVAKVKA+YK+LDL+
Sbjct: 241 PETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLE 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           G F EYE +SY KL   IEA  SKAIQAVLKSFL KIYKRQK
Sbjct: 301 GAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKRQK 342

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BLAST of Csa6G017060.1 vs. Swiss-Prot
Match: FPPS_ARTAN (Farnesyl pyrophosphate synthase OS=Artemisia annua GN=FPS1 PE=2 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 6.9e-149
Identity = 259/340 (76.18%), Postives = 288/340 (84.71%), Query Frame = 1


Query: 3   DLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRLLK 62
           DLKS FLKVY  LKSEL+ DPAFEF D SRQW+E+MLDYNVPGGKLNRGLSV+DSY+LLK
Sbjct: 5   DLKSKFLKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLLK 64

Query: 63  EGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVNDG 122
            G EL++DEIFL+S LGWCIEWLQAYFLVLDDIMD S TRRGQPCWFR+PKVGMIA NDG
Sbjct: 65  GG-ELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAANDG 124

Query: 123 VLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYALSL 182
           +LLRNH+PR+LK HF+GKPYYVDL+DLFNEVEFQTASGQMIDLITT+ GEKDLSKY+LS+
Sbjct: 125 ILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSI 184

Query: 183 HRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ----------- 242
           HRRIVQYKTAYYSFYLPVACAL+M GEDL+ H+ VK++LV+MG YFQVQ           
Sbjct: 185 HRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFGAPE 244

Query: 243 ----VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGV 302
               +GTDIEDFKCSWLVVKALEL N+ QKK LHE YGK DP +VAKVK +Y  L+LQ V
Sbjct: 245 VIGKIGTDIEDFKCSWLVVKALELPNEEQKKTLHENYGKKDPASVAKVKEVYHTLNLQAV 304

Query: 303 FAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           F +YE+ SY KL  SIE  PSKA+QAVLKSFLGKIYKRQK
Sbjct: 305 FEDYEATSYKKLITSIENHPSKAVQAVLKSFLGKIYKRQK 343

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BLAST of Csa6G017060.1 vs. TrEMBL
Match: A0A0A0K801_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G017060 PE=3 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 1.1e-185
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN
Sbjct: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL
Sbjct: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQVGTDIEDFK 240
           SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQVGTDIEDFK
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQVGTDIEDFK 240

Query: 241 CSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGVFAEYESQSYAKLN 300
           CSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGVFAEYESQSYAKLN
Sbjct: 241 CSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGVFAEYESQSYAKLN 300

Query: 301 ASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           ASIEAQPSKAIQAVLKSFLGKIYKRQK
Sbjct: 301 ASIEAQPSKAIQAVLKSFLGKIYKRQK 327

[Close]

BLAST of Csa6G017060.1 vs. TrEMBL
Match: K7NBV9_SIRGR (Farnesyl diphosphate synthase OS=Siraitia grosvenorii PE=2 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 2.0e-171
Identity = 304/342 (88.89%), Postives = 315/342 (92.11%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKSTFLKVYSVLK E LQDPAFEFTDASRQW+ERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLKSTFLKVYSVLKEEPLQDPAFEFTDASRQWIERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LKEGKELTEDEIFL SVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN
Sbjct: 61  LKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGVLLRNHIPR+LKNHFKGK YYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL
Sbjct: 121 DGVLLRNHIPRILKNHFKGKSYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
           S+HRRIVQYKTAYYSFYLPVACALV++GEDL+ H  VKDILVQMGVYFQVQ         
Sbjct: 181 SIHRRIVQYKTAYYSFYLPVACALVISGEDLDKHTVVKDILVQMGVYFQVQDDYLDCFGD 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 VGTDIEDFKCSWLVVKALELCN+ Q KLLHEAYGKPDPENVAKVKA+YK+LD Q
Sbjct: 241 PETIGKVGTDIEDFKCSWLVVKALELCNEEQNKLLHEAYGKPDPENVAKVKALYKELDFQ 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           GVFA+YESQSYAKLNASIEA PSK+IQAV KSFLGKIYKRQK
Sbjct: 301 GVFAKYESQSYAKLNASIEAHPSKSIQAVFKSFLGKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. TrEMBL
Match: A0A076JDS1_GYNPE (Farnesyl diphosphate synthase OS=Gynostemma pentaphyllum PE=2 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 1.6e-165
Identity = 296/342 (86.55%), Postives = 308/342 (90.06%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKS FL VY VLKSELLQDPAFEF+D SRQWVERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLKSIFLDVYYVLKSELLQDPAFEFSDDSRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LKEGKELTE+EIFL SVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVG+IA N
Sbjct: 61  LKEGKELTENEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGLIAAN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DG+LLRNHIPR+LKNHF+ KPYYVDLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY L
Sbjct: 121 DGILLRNHIPRILKNHFREKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
           SLHRRIVQYKTAYYSFYLPVACALVMAGE+LE H  VKD LVQMGVYFQVQ         
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGENLEKHTVVKDNLVQMGVYFQVQDDYLDCFGD 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 VGTDIEDFKCSWLVVKALELCN+ QKK LHE YGK DP NVAKVKA+YK+LDLQ
Sbjct: 241 PETIGKVGTDIEDFKCSWLVVKALELCNEEQKKFLHENYGKEDPANVAKVKALYKELDLQ 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
            VFAEYESQSYAKLNASIEA PSK+IQAVLKSFLGKIYKRQK
Sbjct: 301 SVFAEYESQSYAKLNASIEAHPSKSIQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. TrEMBL
Match: A0A0D2S3N8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G184900 PE=3 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 1.9e-158
Identity = 278/342 (81.29%), Postives = 306/342 (89.47%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKS FL VYS LKSELLQDP+FEFTD SRQWVERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLKSAFLNVYSQLKSELLQDPSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LK+GK+LT+DEIFLTS LGWCIEWLQAYFLVLDDIMD+S TRRGQPCWFR+PKVGMIAVN
Sbjct: 61  LKDGKKLTQDEIFLTSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGV+LRNHI R+LKNHF+GKPYYVDLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY+L
Sbjct: 121 DGVILRNHITRILKNHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYSL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
             HRRIVQYKTAYYSFYLPVACALVMAGE+L+NHI VK+ILV MG+YFQVQ         
Sbjct: 181 QQHRRIVQYKTAYYSFYLPVACALVMAGENLDNHIDVKNILVDMGIYFQVQDDYLDCFGN 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 +GTDIEDFKCSWLVVKALE+CN+ QKK+L+E YGKPDP NVAKVKA+Y +L+L+
Sbjct: 241 PETIGKIGTDIEDFKCSWLVVKALEICNEEQKKVLYENYGKPDPANVAKVKALYNELNLK 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           GVF +YES+SY +L  SIEA PSK +QAVLKSFLGKIYKRQK
Sbjct: 301 GVFEDYESKSYERLVTSIEAHPSKPVQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. TrEMBL
Match: A0A0B0PT58_GOSAR (Farnesyl pyrophosphate synthase 1 OS=Gossypium arboreum GN=F383_14779 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 9.7e-158
Identity = 276/342 (80.70%), Postives = 305/342 (89.18%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADL+S FL VYS LKSELLQDP+FEFTD SRQWVERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLRSAFLNVYSQLKSELLQDPSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LK+GKELT+DEIFLTS LGWCIEWLQAYFLVLDDIMD+S TRRGQPCWFR+PKVGMIAVN
Sbjct: 61  LKDGKELTQDEIFLTSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGV+LRNHI R+LKNHF+GKPYYVDLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY+L
Sbjct: 121 DGVILRNHITRILKNHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYSL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
             HRRIVQYKTAYYSFYLPVACALVM GE+L+NHI VK+ILV MG+YFQVQ         
Sbjct: 181 QQHRRIVQYKTAYYSFYLPVACALVMCGENLDNHIDVKNILVDMGIYFQVQDDYLDCFGN 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 +GTDIEDFKCSWLVVKALE+CN+ QKK+L++ YGKPDP NVAKVKA+Y +L+L+
Sbjct: 241 PETIGKIGTDIEDFKCSWLVVKALEICNEEQKKVLYDNYGKPDPANVAKVKALYNELNLK 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           GVF +YES+SY +L  SIEA PSK +QAVLKSFLGKIYKRQK
Sbjct: 301 GVFEDYESKSYERLVTSIEAHPSKPVQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. TAIR10
Match: AT5G47770.1 (AT5G47770.1 farnesyl diphosphate synthase 1)

HSP 1 Score: 534.3 bits (1375), Expect = 5.4e-152
Identity = 258/340 (75.88%), Postives = 293/340 (86.18%), Query Frame = 1


Query: 3   DLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRLLK 62
           DLKSTFL VYSVLKS+LL DP+FEFT+ SR WV+RMLDYNV GGKLNRGLSV+DS++LLK
Sbjct: 45  DLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLK 104

Query: 63  EGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVNDG 122
           +G +LTE E+FL+  LGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVP+VGM+A+NDG
Sbjct: 105 QGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDG 164

Query: 123 VLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYALSL 182
           +LLRNHI R+LK HF+ KPYYVDL+DLFNEVE QTA GQMIDLITT EGEKDL+KY+LS+
Sbjct: 165 ILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLAKYSLSI 224

Query: 183 HRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ----------- 242
           HRRIVQYKTAYYSFYLPVACAL+MAGE+LENHI VK++LV MG+YFQVQ           
Sbjct: 225 HRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPE 284

Query: 243 ----VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGV 302
               +GTDIEDFKCSWLVVKALE C++ Q K+L+E YGKPDP NVAKVK +YK+LDL+GV
Sbjct: 285 TLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEGV 344

Query: 303 FAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           F EYES+SY KL  +IE   SKAIQAVLKSFL KIYKRQK
Sbjct: 345 FMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK 384

[Close]

BLAST of Csa6G017060.1 vs. TAIR10
Match: AT4G17190.1 (AT4G17190.1 farnesyl diphosphate synthase 2)

HSP 1 Score: 530.0 bits (1364), Expect = 1.0e-150
Identity = 259/342 (75.73%), Postives = 289/342 (84.50%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKSTFL VYSVLKS+LLQDP+FEFT  SRQW+ERMLDYNV GGKLNRGLSV+DSY+L
Sbjct: 1   MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LK+G++LTE E FL+  LGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFR PKVGMIA+N
Sbjct: 61  LKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAIN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DG+LLRNHI R+LK HF+  PYYVDL+DLFNEVEFQTA GQMIDLITT +GEKDLSKY+L
Sbjct: 121 DGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYSL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
            +HRRIV+YKTAYYSFYLPVACAL+MAGE+LENH  VK +LV MG+YFQVQ         
Sbjct: 181 QIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFAD 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 +GTDIEDFKCSWLVVKALE C++ Q K+L+E YGK +P NVAKVKA+YK+LDL+
Sbjct: 241 PETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLE 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           G F EYE +SY KL   IEA  SKAIQAVLKSFL KIYKRQK
Sbjct: 301 GAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. NCBI nr
Match: gi|700190686|gb|KGN45890.1| (hypothetical protein Csa_6G017060 [Cucumis sativus])

HSP 1 Score: 657.1 bits (1694), Expect = 1.6e-185
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN
Sbjct: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL
Sbjct: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQVGTDIEDFK 240
           SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQVGTDIEDFK
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQVGTDIEDFK 240

Query: 241 CSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGVFAEYESQSYAKLN 300
           CSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGVFAEYESQSYAKLN
Sbjct: 241 CSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGVFAEYESQSYAKLN 300

Query: 301 ASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           ASIEAQPSKAIQAVLKSFLGKIYKRQK
Sbjct: 301 ASIEAQPSKAIQAVLKSFLGKIYKRQK 327

[Close]

BLAST of Csa6G017060.1 vs. NCBI nr
Match: gi|449441191|ref|XP_004138366.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis sativus])

HSP 1 Score: 647.1 bits (1668), Expect = 1.6e-182
Identity = 327/342 (95.61%), Postives = 327/342 (95.61%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN
Sbjct: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL
Sbjct: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
           SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ         
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQDDYLDCFGD 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ
Sbjct: 241 PETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK
Sbjct: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. NCBI nr
Match: gi|659126192|ref|XP_008463060.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo])

HSP 1 Score: 637.5 bits (1643), Expect = 1.3e-179
Identity = 322/342 (94.15%), Postives = 324/342 (94.74%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LKEGKELTEDEIFL SVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN
Sbjct: 61  LKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL
Sbjct: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
           SLHRRIVQYKTAYYSFYLPVACALVMAGEDLE H AVKDILVQMGVYFQVQ         
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLEKHTAVKDILVQMGVYFQVQDDYLDCFGD 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 VGTDIEDFKCSWLVVKALELCN++QKKLLHEAYGKPDPENVAKVKAIYKDLDLQ
Sbjct: 241 PETIGKVGTDIEDFKCSWLVVKALELCNEDQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK
Sbjct: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. NCBI nr
Match: gi|343466171|gb|AEM42979.1| (farnesyl diphosphate synthase [Siraitia grosvenorii])

HSP 1 Score: 609.8 bits (1571), Expect = 2.9e-171
Identity = 304/342 (88.89%), Postives = 315/342 (92.11%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKSTFLKVYSVLK E LQDPAFEFTDASRQW+ERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLKSTFLKVYSVLKEEPLQDPAFEFTDASRQWIERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LKEGKELTEDEIFL SVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN
Sbjct: 61  LKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DGVLLRNHIPR+LKNHFKGK YYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL
Sbjct: 121 DGVLLRNHIPRILKNHFKGKSYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
           S+HRRIVQYKTAYYSFYLPVACALV++GEDL+ H  VKDILVQMGVYFQVQ         
Sbjct: 181 SIHRRIVQYKTAYYSFYLPVACALVISGEDLDKHTVVKDILVQMGVYFQVQDDYLDCFGD 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 VGTDIEDFKCSWLVVKALELCN+ Q KLLHEAYGKPDPENVAKVKA+YK+LD Q
Sbjct: 241 PETIGKVGTDIEDFKCSWLVVKALELCNEEQNKLLHEAYGKPDPENVAKVKALYKELDFQ 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
           GVFA+YESQSYAKLNASIEA PSK+IQAV KSFLGKIYKRQK
Sbjct: 301 GVFAKYESQSYAKLNASIEAHPSKSIQAVFKSFLGKIYKRQK 342

[Close]

BLAST of Csa6G017060.1 vs. NCBI nr
Match: gi|671183990|gb|AII72208.1| (farnesyl diphosphate synthase [Gynostemma pentaphyllum])

HSP 1 Score: 590.1 bits (1520), Expect = 2.4e-165
Identity = 296/342 (86.55%), Postives = 308/342 (90.06%), Query Frame = 1


Query: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60
           MADLKS FL VY VLKSELLQDPAFEF+D SRQWVERMLDYNVPGGKLNRGLSVIDSYRL
Sbjct: 1   MADLKSIFLDVYYVLKSELLQDPAFEFSDDSRQWVERMLDYNVPGGKLNRGLSVIDSYRL 60

Query: 61  LKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVN 120
           LKEGKELTE+EIFL SVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVG+IA N
Sbjct: 61  LKEGKELTENEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGLIAAN 120

Query: 121 DGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYAL 180
           DG+LLRNHIPR+LKNHF+ KPYYVDLLDLFNEVEFQTASGQMIDLITT+EGEKDLSKY L
Sbjct: 121 DGILLRNHIPRILKNHFREKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL 180

Query: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQ--------- 240
           SLHRRIVQYKTAYYSFYLPVACALVMAGE+LE H  VKD LVQMGVYFQVQ         
Sbjct: 181 SLHRRIVQYKTAYYSFYLPVACALVMAGENLEKHTVVKDNLVQMGVYFQVQDDYLDCFGD 240

Query: 241 ------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQ 300
                 VGTDIEDFKCSWLVVKALELCN+ QKK LHE YGK DP NVAKVKA+YK+LDLQ
Sbjct: 241 PETIGKVGTDIEDFKCSWLVVKALELCNEEQKKFLHENYGKEDPANVAKVKALYKELDLQ 300

Query: 301 GVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 328
            VFAEYESQSYAKLNASIEA PSK+IQAVLKSFLGKIYKRQK
Sbjct: 301 SVFAEYESQSYAKLNASIEAHPSKSIQAVLKSFLGKIYKRQK 342

The following BLAST results are available for this feature:

BLAST of Csa6G017060.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FPPS1_LUPAL	9.6e-159	80.99	Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1	[more]
FPPS2_LUPAL	2.7e-153	77.78	Farnesyl pyrophosphate synthase 2 OS=Lupinus albus GN=FPS2 PE=2 SV=1	[more]
FPPS1_ARATH	9.6e-151	75.88	Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana GN=FPS1...	[more]
FPPS2_ARATH	1.8e-149	75.73	Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana GN=FPS2 PE=2 SV=1	[more]
FPPS_ARTAN	6.9e-149	76.18	Farnesyl pyrophosphate synthase OS=Artemisia annua GN=FPS1 PE=2 SV=1	[more]

BLAST of Csa6G017060.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K801_CUCSA	1.1e-185	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G017060 PE=3 SV=1	[more]
K7NBV9_SIRGR	2.0e-171	88.89	Farnesyl diphosphate synthase OS=Siraitia grosvenorii PE=2 SV=1	[more]
A0A076JDS1_GYNPE	1.6e-165	86.55	Farnesyl diphosphate synthase OS=Gynostemma pentaphyllum PE=2 SV=1	[more]
A0A0D2S3N8_GOSRA	1.9e-158	81.29	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G184900 PE=3 SV=1	[more]
A0A0B0PT58_GOSAR	9.7e-158	80.70	Farnesyl pyrophosphate synthase 1 OS=Gossypium arboreum GN=F383_14779 PE=3 SV=1	[more]

BLAST of Csa6G017060.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47770.1	5.4e-152	75.88	farnesyl diphosphate synthase 1	[more]
AT4G17190.1	1.0e-150	75.73	farnesyl diphosphate synthase 2	[more]

BLAST of Csa6G017060.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700190686\|gb\|KGN45890.1\|	1.6e-185	100.00	hypothetical protein Csa_6G017060 [Cucumis sativus]	[more]
gi\|449441191\|ref\|XP_004138366.1\|	1.6e-182	95.61	PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis sativus]	[more]
gi\|659126192\|ref\|XP_008463060.1\|	1.3e-179	94.15	PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo]	[more]
gi\|343466171\|gb\|AEM42979.1\|	2.9e-171	88.89	farnesyl diphosphate synthase [Siraitia grosvenorii]	[more]
gi\|671183990\|gb\|AII72208.1\|	2.4e-165	86.55	farnesyl diphosphate synthase [Gynostemma pentaphyllum]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000092	Polyprenyl_synt
IPR008949	Isoprenoid_synthase_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0008299	isoprenoid biosynthetic process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0006695	cholesterol biosynthetic process
biological_process	GO:0045337	farnesyl diphosphate biosynthetic process
biological_process	GO:0033384	geranyl diphosphate biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004161	dimethylallyltranstransferase activity
molecular_function	GO:0004337	geranyltranstransferase activity
molecular_function	GO:0046872	metal ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G017060	Csa6G017060	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G017060.1	Csa6G017060.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G017060.1.cds11	Csa6G017060.1.cds11	CDS
Csa6G017060.1.cds10	Csa6G017060.1.cds10	CDS
Csa6G017060.1.cds9	Csa6G017060.1.cds9	CDS
Csa6G017060.1.cds8	Csa6G017060.1.cds8	CDS
Csa6G017060.1.cds7	Csa6G017060.1.cds7	CDS
Csa6G017060.1.cds6	Csa6G017060.1.cds6	CDS
Csa6G017060.1.cds5	Csa6G017060.1.cds5	CDS
Csa6G017060.1.cds4	Csa6G017060.1.cds4	CDS
Csa6G017060.1.cds3	Csa6G017060.1.cds3	CDS
Csa6G017060.1.cds2	Csa6G017060.1.cds2	CDS
Csa6G017060.1.cds1	Csa6G017060.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G017060.1.utr5p1	Csa6G017060.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 33..281 score: 1.6
IPR000092	Polyprenyl synthetase	PROSITE	PS00723	POLYPRENYL_SYNTHASE_1	coord: 90..104 scor
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 5..327 score: 1.1
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 7..326 score: 1.38
None	No IPR available	PANTHER	PTHR11525	FARNESYL-PYROPHOSPHATE SYNTHETASE	coord: 3..327 score: 1.0E
None	No IPR available	PANTHER	PTHR11525:SF5	SUBFAMILY NOT NAMED	coord: 3..327 score: 1.0E