Csa5G650440.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa5G650440.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionF-box/LRR-repeat protein; contains IPR001810 (F-box domain, cyclin-like)
LocationChr5 : 27738769 .. 27739644 (+)
Sequence length816
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGACAACAGAATTAGCCTTCTTCCAGACACTCTTCTTCATCACATTCTATCCACCTTGAACACAAAATTCGTTGTCCAAACTTGTCTTCTCTCTAAACGATGGAAAACCCTTTGGACTCTAATCCCCACTCTCAACTTTGATTACAACTCTTTCTCCTCCTCCTCATTATTCAAATATGACGACGAGGAATCCAAACGAAGATCCTTCAAGTTCTTCATCTTTCGAGTTTTATCAATACACTGCGCCACTAACATTCATAAGCTCACCTACACTTCCTCTCCAAACGGAGATGAATGTGTTTTAGTTGAACTGCTGATATGCTATGCTGGATCCCACAAAGTCCAACAACTTTGCATAAATACTTACAATATTTGTATTTATGAGTGGGATTACTGTTTTCCCATGTGTTCATCACTCATTGAATTGAAGATGGTATGTGGGTTTGTGGATGATTGGGGAGTCTTGGCCTGACCATCCTTGAAAATATTAGAGATCCAATGTGATTGGTCTGCACGAGATGAGAGAGCAAATTACAATGGAATTACAATGTTTTCTGGATGTCCAAATTTGGAATCTTTGGTTTTGGTTGACTATCTTTTTGAGACTGCTACTATTTCTGCTCCTAGACTTGAGATCTTTAAACTATGTGCTTCTCATGACATGGAATTAACTTTTCCCCAGGTTGAATTGCTTACACCCACTCTCAAAACTGTCAATTTTGTCAATATGTTGCCTATTCTCCAGTCTGATTCAGAATTTTCGTGCATACACAAAGTAGATATACAACTTGAAGATTCTGTTTTTACAACCGATGGCTCACAAACACAAGAGTTAAAATCAAAATTCATAGATTTACTGACTGTTGCATAA

mRNA sequence

ATGAATGACAACAGAATTAGCCTTCTTCCAGACACTCTTCTTCATCACATTCTATCCACCTTGAACACAAAATTCGTTGTCCAAACTTGTCTTCTCTCTAAACGATGGAAAACCCTTTGGACTCTAATCCCCACTCTCAACTTTGATTACAACTCTTTCTCCTCCTCCTCATTATTCAAATATGACGACGAGGAATCCAAACGAAGATCCTTCAAGTTCTTCATCTTTCGAGTTTTATCAATACACTGCGCCACTAACATTCATAAGCTCACCTACACTTCCTCTCCAAACGGAGATGAATGTGTTTTAGTTGAACTGCTGATATGCTATGCTGGATCCCACAAAGTCCAACAACTTTGCATAAATACTTACAATATTTGTATTTATGAGTGGGATTACTGTTTTCCCATGTGTTCATCACTCATTGAATTGAAGATGATCCAATGTGATTGGTCTGCACGAGATGAGAGAGCAAATTACAATGGAATTACAATGTTTTCTGGATGTCCAAATTTGGAATCTTTGGTTTTGGTTGACTATCTTTTTGAGACTGCTACTATTTCTGCTCCTAGACTTGAGATCTTTAAACTATGTGCTTCTCATGACATGGAATTAACTTTTCCCCAGGTTGAATTGCTTACACCCACTCTCAAAACTGTCAATTTTGTCAATATGTTGCCTATTCTCCAGTCTGATTCAGAATTTTCGTGCATACACAAAGTAGATATACAACTTGAAGATTCTGTTTTTACAACCGATGGCTCACAAACACAAGAGTTAAAATCAAAATTCATAGATTTACTGACTGTTGCATAA

Coding sequence (CDS)

ATGAATGACAACAGAATTAGCCTTCTTCCAGACACTCTTCTTCATCACATTCTATCCACCTTGAACACAAAATTCGTTGTCCAAACTTGTCTTCTCTCTAAACGATGGAAAACCCTTTGGACTCTAATCCCCACTCTCAACTTTGATTACAACTCTTTCTCCTCCTCCTCATTATTCAAATATGACGACGAGGAATCCAAACGAAGATCCTTCAAGTTCTTCATCTTTCGAGTTTTATCAATACACTGCGCCACTAACATTCATAAGCTCACCTACACTTCCTCTCCAAACGGAGATGAATGTGTTTTAGTTGAACTGCTGATATGCTATGCTGGATCCCACAAAGTCCAACAACTTTGCATAAATACTTACAATATTTGTATTTATGAGTGGGATTACTGTTTTCCCATGTGTTCATCACTCATTGAATTGAAGATGATCCAATGTGATTGGTCTGCACGAGATGAGAGAGCAAATTACAATGGAATTACAATGTTTTCTGGATGTCCAAATTTGGAATCTTTGGTTTTGGTTGACTATCTTTTTGAGACTGCTACTATTTCTGCTCCTAGACTTGAGATCTTTAAACTATGTGCTTCTCATGACATGGAATTAACTTTTCCCCAGGTTGAATTGCTTACACCCACTCTCAAAACTGTCAATTTTGTCAATATGTTGCCTATTCTCCAGTCTGATTCAGAATTTTCGTGCATACACAAAGTAGATATACAACTTGAAGATTCTGTTTTTACAACCGATGGCTCACAAACACAAGAGTTAAAATCAAAATTCATAGATTTACTGACTGTTGCATAA

Protein sequence

MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLCINTYNICIYEWDYCFPMCSSLIELKMIQCDWSARDERANYNGITMFSGCPNLESLVLVDYLFETATISAPRLEIFKLCASHDMELTFPQVELLTPTLKTVNFVNMLPILQSDSEFSCIHKVDIQLEDSVFTTDGSQTQELKSKFIDLLTVA*
Homology
[Close]
BLAST of Csa5G650440.1 vs. Swiss-Prot
Match: FDL14_ARATH (F-box/FBD/LRR-repeat protein At2g04230 OS=Arabidopsis thaliana GN=At2g04230 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14
Identity = 69/221 (31.22%), Postives = 110/221 (49.77%), Query Frame = 1 

Query: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60
           MN++RIS LPD LL  ILS+L T+  + T +LSKRW++LWT++P L FD N F+      
Sbjct: 10  MNEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSN-FNP----V 69

Query: 61  YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC 120
           +DD+      F   +++ LS+H A  +  L + S     +C+ V + I  A +  V++L 
Sbjct: 70  FDDDNIDPTMFSENVYKTLSLHKAPVLESL-HLSFEGRTDCLHVGIWIATAFARGVRKLV 129

Query: 121 IN----------------TYN--------ICIYEWDYCFPMC-SSLIELKMIQCDWSARD 180
           ++                +YN         C  + D+   +C  SL +L + Q  +  +D
Sbjct: 130 LDSFYQEDQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYLDQVHF--KD 189

Query: 181 ERANYNGITMFSGCPNLESLVLVDYL---FETATISAPRLE 194
           E +  N   +  GCP+L+ LV+  Y      T TI++P L+
Sbjct: 190 EESVCN---LLCGCPSLQDLVVHRYSNADVATFTIASPSLQ 219

[Close]
BLAST of Csa5G650440.1 vs. Swiss-Prot
Match: FDL48_ARATH (Putative F-box/FBD/LRR-repeat protein At4g13965 OS=Arabidopsis thaliana GN=At4g13965 PE=4 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-11
Identity = 63/219 (28.77%), Postives = 99/219 (45.21%), Query Frame = 1 

Query: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60
           +N +RIS LP+ L+  ILS L T+  V T +LSK+W+ LW ++P LNFD  S      FK
Sbjct: 11  VNADRISQLPEALIIQILSLLPTEVAVTTSVLSKQWQFLWKMLPKLNFD--SLDQRHEFK 70

Query: 61  YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPN----GDECVLVELLI-CYAGSHK 120
              +  KR         + S+H   ++H     ++         C L +L++    G   
Sbjct: 71  TFSKNVKRALLSHKAPVLHSLHLIVHLHLCNSMNTAKLIGIAFACNLRKLVLEVDGGRFS 130

Query: 121 VQQLCINTYNICIYEWDYCFPMCSSLIELKMIQCDWSAR-------DERANYNGITMFSG 180
           + +   N   +   E  Y     S L+++    C  S R       D + N + + + SG
Sbjct: 131 IPESLYNCETLDTLELKY-----SILMDVPSSICLKSLRTLHLHYVDFKDNESALNLLSG 190

Query: 181 CPNLESLVLVDYLF---ETATISAPRLEIFKLCASHDME 205
           CPNLE+LV+  Y F   +T TI+   L+   +  S  ++
Sbjct: 191 CPNLENLVVHRYPFSSVKTYTIAVSSLKRLTIYTSSTVD 222

[Close]
BLAST of Csa5G650440.1 vs. Swiss-Prot
Match: FDL3_ARATH (F-box/FBD/LRR-repeat protein At1g16930 OS=Arabidopsis thaliana GN=At1g16930 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11
Identity = 69/249 (27.71%), Postives = 102/249 (40.96%), Query Frame = 1 

Query: 2   NDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK- 61
           N +RIS LPD+LL  ILS L+TK  V T +LSKRW+ LW  +P L+ D N+F    +F  
Sbjct: 13  NSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDVFVS 72

Query: 62  --------------------YDDEESKRRSFKFFIFRVLSIH-CATNIHKLTYTSSPNGD 121
                               Y+  E     FK +I  V+    C  N+H        + D
Sbjct: 73  FVNRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVH----NEVDDDD 132

Query: 122 ECVLVELLICYAGSHKVQQLCINTYNICIYEWDYCFPMCSSLIELKMIQCDWSARDERAN 181
           E V + L +           C    N+ +Y      P   SL  +K++  D    D  + 
Sbjct: 133 ELVKMPLSL---------YSCERLVNLQLYRVALDHPESVSLPCVKIMHLDMVKYDADST 192

Query: 182 YNGITMFSGCPNLESLVLV---DYLFETATISAPRLEIFKLCASHDMELTFPQVELLTPT 226
                + SGCP LE L +V   +   E   + +  L+ FK+    D E    Q  ++T  
Sbjct: 193 LE--ILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKI----DSERYESQNHVVTID 242

[Close]
BLAST of Csa5G650440.1 vs. Swiss-Prot
Match: FDL44_ARATH (F-box/FBD/LRR-repeat protein At3g26920 OS=Arabidopsis thaliana GN=At3g26920 PE=2 SV=3)

HSP 1 Score: 68.9 bits (167), Expect = 9.5e-11
Identity = 66/243 (27.16%), Postives = 109/243 (44.86%), Query Frame = 1 

Query: 2   NDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKY 61
           N++RIS LP+ LL  ILS L TK VV   +L+KRW+ LW ++P+L F Y   +    F Y
Sbjct: 15  NEDRISQLPEALLLQILSLLPTKEVVAVSVLAKRWRFLWKMVPSLEFFYYFTNDLERFSY 74

Query: 62  DDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVL-VELLICYAGSHKVQQLC 121
           +            + + L  H A  +  L    +   D  ++  E+LI  A   ++++L 
Sbjct: 75  N------------VSKCLFSHQAPFLQSLHLNMNFGCDPRIMDFEILIGIAFGRQLRKLV 134

Query: 122 INTYNICIYEW---------------------DYCFPMC-SSLIELKMIQCDWSARDERA 181
           +  Y+   +++                     D  FP+C  SL  L + + ++   DE  
Sbjct: 135 LKVYSGDWFKFPTSLYNSETLETLELYHCILIDVPFPVCLKSLRTLNLHEVEF-VNDESV 194

Query: 182 NYNGITMFSGCPNLESLVL---VDYLFETATISAPRLEIFKLCASHDMELTFPQVELLTP 219
               + + +GC +LE+LV+    D   +T TI+ P L+   +   +  E  F    + TP
Sbjct: 195 ----VNLLAGCISLENLVIHQTTDLNVKTFTIAVPSLQRLTVIVEYYEE--FSVFVVNTP 238

[Close]
BLAST of Csa5G650440.1 vs. Swiss-Prot
Match: FBD41_ARATH (FBD-associated F-box protein At5g18780 OS=Arabidopsis thaliana GN=At5g18780 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-10
Identity = 50/145 (34.48%), Postives = 68/145 (46.90%), Query Frame = 1 

Query: 3   DNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYD 62
           ++RIS+LP+ LL HILS L TK  V+T +LS RW+ LW  +P L+ D + FS       D
Sbjct: 10  EDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFS-------D 69

Query: 63  DEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLCI- 122
           D  S     KF  FR  S      ++        +  +  L+ L  C     K+Q   I 
Sbjct: 70  DNPSASFVDKFLNFRGESYLRGFKLNTDHDVYDISTLDACLMRLDKC-----KIQHFEIE 129

Query: 123 NTYNICIYEWDYCFPMCSSLIELKM 147
           N +  CI       PMC +L+ LK+
Sbjct: 130 NCFGFCILLMPLIIPMCHTLVSLKL 142

[Close]
BLAST of Csa5G650440.1 vs. TrEMBL
Match: A0A0A0KUU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650440 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 2.2e-155
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

Query: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60
           MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK
Sbjct: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60

Query: 61  YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC 120
           YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC
Sbjct: 61  YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC 120

Query: 121 INTYNICIYEWDYCFPMCSSLIELKMIQCDWSARDERANYNGITMFSGCPNLESLVLVDY 180
           INTYNICIYEWDYCFPMCSSLIELKMIQCDWSARDERANYNGITMFSGCPNLESLVLVDY
Sbjct: 121 INTYNICIYEWDYCFPMCSSLIELKMIQCDWSARDERANYNGITMFSGCPNLESLVLVDY 180

Query: 181 LFETATISAPRLEIFKLCASHDMELTFPQVELLTPTLKTVNFVNMLPILQSDSEFSCIHK 240
           LFETATISAPRLEIFKLCASHDMELTFPQVELLTPTLKTVNFVNMLPILQSDSEFSCIHK
Sbjct: 181 LFETATISAPRLEIFKLCASHDMELTFPQVELLTPTLKTVNFVNMLPILQSDSEFSCIHK 240

Query: 241 VDIQLEDSVFTTDGSQTQELKSKFIDLLTVA 272
           VDIQLEDSVFTTDGSQTQELKSKFIDLLTVA
Sbjct: 241 VDIQLEDSVFTTDGSQTQELKSKFIDLLTVA 271

[Close]
BLAST of Csa5G650440.1 vs. TrEMBL
Match: A0A0A0KSW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650430 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.1e-69
Identity = 161/294 (54.76%), Postives = 201/294 (68.37%), Query Frame = 1 

Query: 3   DNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYD 62
           ++RISLLPD LLH ILS LNTK VVQTC+LSKRWKTLWT IPTLNFDYNS  S S+FK +
Sbjct: 11  EDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTE 70

Query: 63  DEE-SKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNG-DECVLVELLICYAGSHKVQQLC 122
           +++ SK+ SFK FI RVLS     +I KL YTSS N  D  +L + LI YA SH VQQL 
Sbjct: 71  EDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQLF 130

Query: 123 INTYNIC-IYEWDYCFPM--CSSLIELKM--------------------IQCDWSAR-DE 182
           +NT+N+   + WD+C  +  CSSL+ LK+                    I+  W  R D+
Sbjct: 131 LNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERPDK 190

Query: 183 RANYNGITMFSGCPNLESLVLVDYLFETATISAPRLEIFKLCASHDMELTFPQVELLTPT 242
           RAN+  ITMF GCPNLESLV   +LF+TATISAP+L+  KLCAS D + TF +V+LLTPT
Sbjct: 191 RANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLTPT 250

Query: 243 LKTVNFVNMLPILQSDSEFSCIHKVDIQLEDSVFTTDGSQTQELKSKFIDLLTV 271
           L+ ++FVN+LP ++SD EFS I KVDIQL  S F  D   ++  KSKF +LL+V
Sbjct: 251 LENISFVNVLPTVKSDYEFSRIDKVDIQLV-SRFERDDRNSR--KSKFRELLSV 301

[Close]
BLAST of Csa5G650440.1 vs. TrEMBL
Match: A0A0A0KSW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650430 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.2e-29
Identity = 74/113 (65.49%), Postives = 83/113 (73.45%), Query Frame = 1 

Query: 9   LPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSL-FKYDDEESK 68
           LP  LLH ILSTL+ K +VQTC+LSKRWKTLWT IPTLNF YNS+S  +     +D E+K
Sbjct: 378 LPGFLLHDILSTLDAKIIVQTCVLSKRWKTLWTHIPTLNFHYNSYSLLAWEVDIEDLETK 437

Query: 69  RR---SFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQ 118
           +R   SFK FI  VLS HC  NI KLTYTSS + DE VLVELLICYAG H VQ
Sbjct: 438 QRSFKSFKSFIILVLSKHCCKNIQKLTYTSSGDKDELVLVELLICYAGCHNVQ 490


HSP 2 Score: 130.6 bits (327), Expect = 3.0e-27
Identity = 93/252 (36.90%), Postives = 125/252 (49.60%), Query Frame = 1 

Query: 3   DNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYD 62
           ++RIS LPD LL  I+S LNTK  VQTC+LSKRWK LW  +P L+FD+++F        +
Sbjct: 20  EDRISKLPDDLLLKIMSLLNTKQAVQTCVLSKRWKPLWQSLPNLDFDFDTFPFQQEIDDE 79

Query: 63  DEES---KRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQL 122
           D+E    K  SF  FI +VL   C T++ K+   S      C LV+ L+CYA  H VQQL
Sbjct: 80  DKEEVEMKMCSFSNFISQVLLRRCPTDLVKVCVQSHIYDPHCFLVDGLLCYAVKHNVQQL 139

Query: 123 CINTYNICIYEWDYCFPMCSSLIELKMIQCDWS------------------ARDERANYN 182
             ++ + C Y +   F  C SL  L++   DW                   +    A  N
Sbjct: 140 TFHSRSDCQYLFPESFWTCQSLTSLELKGSDWMPMKLPTLLACLALKSLHLSHFSTAGPN 199

Query: 183 -GITMFSGCPNLESLVLVDYL---FETATISAPRLEIFKLCASHDMELTFPQVELLTPTL 230
              T FSGCPNLE+L L D L    E   I A +L    L  +    L   +VE+  P L
Sbjct: 200 FEPTAFSGCPNLETLQLFDILAVGSEGLCIDALKLTSLVLSFA---SLCHGKVEIYAPRL 259

[Close]
BLAST of Csa5G650440.1 vs. TrEMBL
Match: A0A061FT05_THECC (F-box/RNI-like superfamily protein OS=Theobroma cacao GN=TCM_045488 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.0e-27
Identity = 95/288 (32.99%), Postives = 136/288 (47.22%), Query Frame = 1 

Query: 3   DNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYD 62
           ++RIS LPD LL  I+S LNTK  VQTC+LSKRWK LW  +P L+FD+++F        +
Sbjct: 20  EDRISKLPDDLLLKIMSLLNTKQAVQTCVLSKRWKPLWQSLPNLDFDFDTFPFQQEIDDE 79

Query: 63  DEES---KRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQL 122
           D+E    K  SF  FI +VL   C T++ K+   S      C LV+ LICYA  H VQQL
Sbjct: 80  DKEEVEMKMCSFSNFISQVLFRRCPTDLVKVCVQSHIYDPHCFLVDGLICYAVKHNVQQL 139

Query: 123 CINTYNICIYEWDYCFPMCSSLIELKMIQCDWSARD--------------------ERAN 182
             ++ + C Y     F  C SL  L++   DW                           N
Sbjct: 140 TFHSRSDCQYILPESFWTCQSLTSLELKGSDWMPMKLPTLLACPALKSLHLSHFFAAGPN 199

Query: 183 YNGITMFSGCPNLESLVLVDYL-FETATISAPRLEIFKLCASHDMELTFPQVELLTPTLK 242
           +   T FSGCPNLE++ L D L   +  +    L++  L  S    L   +VE+  P L 
Sbjct: 200 FEP-TAFSGCPNLETMQLFDILAVGSEGLCIDALKLTSLVFSF-ASLRHSKVEIYAPQLT 259

Query: 243 TVNFVNMLPILQSDSEFSCIHKVDIQLEDSVFTTDGSQTQELKSKFID 267
           T  +  + PI+      + +  V   ++   F  +  ++  L  K I+
Sbjct: 260 TFKYSGIPPIVCLTDHLASVDDVYFDMKTPGFKRNEEESVLLLIKTIN 305

[Close]
BLAST of Csa5G650440.1 vs. TrEMBL
Match: A0A061FZ54_THECC (F-box/RNI-like superfamily protein OS=Theobroma cacao GN=TCM_045483 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 92/252 (36.51%), Postives = 122/252 (48.41%), Query Frame = 1 

Query: 3   DNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYD 62
           ++RIS LPD LL  I+S LNTK  VQTC+LSKRWK LW  +P L FD+++F        +
Sbjct: 29  EDRISKLPDGLLLKIMSFLNTKQAVQTCVLSKRWKPLWQSLPNLVFDFDTFPFQQEIDDE 88

Query: 63  DEES---KRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQL 122
           D+E    K  SF  FI +VL   C T++ K+   S      C LV+ L+CYA  H VQQL
Sbjct: 89  DQEEVEMKMCSFSNFIRQVLFRRCPTDLVKVCVQSHIYDPHCFLVDGLLCYAVKHNVQQL 148

Query: 123 CINTYNICIYEWDYCFPMCSSLIELKMIQCDWS------------------ARDERANYN 182
             ++ + C Y +   F  C SL  L++   DW                   +    A  N
Sbjct: 149 TFHSRSDCQYLFPESFWTCQSLTSLELKGSDWMPMKLPTLLACPALKSLHLSHFSTAGPN 208

Query: 183 -GITMFSGCPNLESLVLVDYL---FETATISAPRLEIFKLCASHDMELTFPQVELLTPTL 230
              T FSGC NLE+L L D L    E   I A +L    L  +    L   +VE+  P L
Sbjct: 209 FEPTAFSGCLNLETLQLFDILAVGSEGLCIDALKLTSLVLSFAF---LGDGKVEIYAPRL 268

[Close]
BLAST of Csa5G650440.1 vs. TAIR10
Match: AT2G04230.1 (AT2G04230.1 FBD, F-box and Leucine Rich Repeat domains containing protein)

HSP 1 Score: 81.6 bits (200), Expect = 8.0e-16
Identity = 69/221 (31.22%), Postives = 110/221 (49.77%), Query Frame = 1 

Query: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60
           MN++RIS LPD LL  ILS+L T+  + T +LSKRW++LWT++P L FD N F+      
Sbjct: 10  MNEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSN-FNP----V 69

Query: 61  YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC 120
           +DD+      F   +++ LS+H A  +  L + S     +C+ V + I  A +  V++L 
Sbjct: 70  FDDDNIDPTMFSENVYKTLSLHKAPVLESL-HLSFEGRTDCLHVGIWIATAFARGVRKLV 129

Query: 121 IN----------------TYN--------ICIYEWDYCFPMC-SSLIELKMIQCDWSARD 180
           ++                +YN         C  + D+   +C  SL +L + Q  +  +D
Sbjct: 130 LDSFYQEDQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYLDQVHF--KD 189

Query: 181 ERANYNGITMFSGCPNLESLVLVDYL---FETATISAPRLE 194
           E +  N   +  GCP+L+ LV+  Y      T TI++P L+
Sbjct: 190 EESVCN---LLCGCPSLQDLVVHRYSNADVATFTIASPSLQ 219

[Close]
BLAST of Csa5G650440.1 vs. TAIR10
Match: AT1G16930.1 (AT1G16930.1 F-box/RNI-like/FBD-like domains-containing protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12
Identity = 69/249 (27.71%), Postives = 102/249 (40.96%), Query Frame = 1 

Query: 2   NDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK- 61
           N +RIS LPD+LL  ILS L+TK  V T +LSKRW+ LW  +P L+ D N+F    +F  
Sbjct: 13  NSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDVFVS 72

Query: 62  --------------------YDDEESKRRSFKFFIFRVLSIH-CATNIHKLTYTSSPNGD 121
                               Y+  E     FK +I  V+    C  N+H        + D
Sbjct: 73  FVNRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVH----NEVDDDD 132

Query: 122 ECVLVELLICYAGSHKVQQLCINTYNICIYEWDYCFPMCSSLIELKMIQCDWSARDERAN 181
           E V + L +           C    N+ +Y      P   SL  +K++  D    D  + 
Sbjct: 133 ELVKMPLSL---------YSCERLVNLQLYRVALDHPESVSLPCVKIMHLDMVKYDADST 192

Query: 182 YNGITMFSGCPNLESLVLV---DYLFETATISAPRLEIFKLCASHDMELTFPQVELLTPT 226
                + SGCP LE L +V   +   E   + +  L+ FK+    D E    Q  ++T  
Sbjct: 193 LE--ILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKI----DSERYESQNHVVTID 242

[Close]
BLAST of Csa5G650440.1 vs. TAIR10
Match: AT5G18780.1 (AT5G18780.1 F-box/RNI-like superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 9.1e-12
Identity = 50/145 (34.48%), Postives = 68/145 (46.90%), Query Frame = 1 

Query: 3   DNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYD 62
           ++RIS+LP+ LL HILS L TK  V+T +LS RW+ LW  +P L+ D + FS       D
Sbjct: 10  EDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFS-------D 69

Query: 63  DEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLCI- 122
           D  S     KF  FR  S      ++        +  +  L+ L  C     K+Q   I 
Sbjct: 70  DNPSASFVDKFLNFRGESYLRGFKLNTDHDVYDISTLDACLMRLDKC-----KIQHFEIE 129

Query: 123 NTYNICIYEWDYCFPMCSSLIELKM 147
           N +  CI       PMC +L+ LK+
Sbjct: 130 NCFGFCILLMPLIIPMCHTLVSLKL 142

[Close]
BLAST of Csa5G650440.1 vs. TAIR10
Match: AT4G13960.1 (AT4G13960.1 F-box/RNI-like superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.9e-11
Identity = 46/150 (30.67%), Postives = 69/150 (46.00%), Query Frame = 1 

Query: 4   NRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYDD 63
           + +S LPD +L+HILS L TK    T +LSKRW+ L+T +P L+ D + F      K +D
Sbjct: 2   DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGK-ED 61

Query: 64  EESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLCINT 123
               ++SF  F+ RVL++   + I KL+       D             SH+V     N 
Sbjct: 62  RYEIQKSFMKFVDRVLALQGNSPIKKLSLKLRTGFD-------------SHRVDGWISNA 121

Query: 124 YNICIYEWDYCFPMCSSLIELKMIQCDWSA 154
               + E D    +    ++L  ++ DW A
Sbjct: 122 LARGVTELDLLIILNLVTLKLNSVRVDWLA 137

[Close]
BLAST of Csa5G650440.1 vs. TAIR10
Match: AT3G52680.1 (AT3G52680.1 F-box/RNI-like/FBD-like domains-containing protein)

HSP 1 Score: 65.1 bits (157), Expect = 7.7e-11
Identity = 66/232 (28.45%), Postives = 101/232 (43.53%), Query Frame = 1 

Query: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60
           M  +RIS LPD LL  ILS+L T  VV T +LSK+W++LW L+P L FD           
Sbjct: 18  MGKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFD----------- 77

Query: 61  YDDEESKRRSFKFFIFRVLSIHCATNIH--KLTYTSSPNGDECVLVELLICYAGSHKVQQ 120
            DD ES+  +F   + +    H A  +   +L + +    D    + L +  A S  +++
Sbjct: 78  SDDYESEHYTFSEIVCKSFLSHKAPVLESFRLKFVNFNPVD----IGLWVGIAFSRHLRE 137

Query: 121 LCINTYNICIYEW-DYCFP----MCSSLIELKMIQCDW--------------------SA 180
           L ++ Y   + +   + FP     C++L  LK++ C                        
Sbjct: 138 LVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRY 197

Query: 181 RDERANYNGITMFSGCPNLESLVLV---DYLFETATISAPRLEIFKLCASHD 203
           +DE +  N   + SGCP LE L L    D   +  TI  P L+   +  ++D
Sbjct: 198 KDESSVRN---LLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNND 231

[Close]
BLAST of Csa5G650440.1 vs. NCBI nr
Match: gi|700197502|gb|KGN52679.1| (hypothetical protein Csa_5G650440 [Cucumis sativus])

HSP 1 Score: 556.2 bits (1432), Expect = 3.1e-155
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

Query: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60
           MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK
Sbjct: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60

Query: 61  YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC 120
           YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC
Sbjct: 61  YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC 120

Query: 121 INTYNICIYEWDYCFPMCSSLIELKMIQCDWSARDERANYNGITMFSGCPNLESLVLVDY 180
           INTYNICIYEWDYCFPMCSSLIELKMIQCDWSARDERANYNGITMFSGCPNLESLVLVDY
Sbjct: 121 INTYNICIYEWDYCFPMCSSLIELKMIQCDWSARDERANYNGITMFSGCPNLESLVLVDY 180

Query: 181 LFETATISAPRLEIFKLCASHDMELTFPQVELLTPTLKTVNFVNMLPILQSDSEFSCIHK 240
           LFETATISAPRLEIFKLCASHDMELTFPQVELLTPTLKTVNFVNMLPILQSDSEFSCIHK
Sbjct: 181 LFETATISAPRLEIFKLCASHDMELTFPQVELLTPTLKTVNFVNMLPILQSDSEFSCIHK 240

Query: 241 VDIQLEDSVFTTDGSQTQELKSKFIDLLTVA 272
           VDIQLEDSVFTTDGSQTQELKSKFIDLLTVA
Sbjct: 241 VDIQLEDSVFTTDGSQTQELKSKFIDLLTVA 271

[Close]
BLAST of Csa5G650440.1 vs. NCBI nr
Match: gi|659119366|ref|XP_008459617.1| (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo])

HSP 1 Score: 493.8 bits (1270), Expect = 1.9e-136
Identity = 246/290 (84.83%), Postives = 258/290 (88.97%), Query Frame = 1 

Query: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60
           M D+RISLLPD+LLHHILST NTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSS F 
Sbjct: 14  MEDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSFN 73

Query: 61  YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC 120
           YDDEESKRRSFKFFIFRVLS HCAT+I KLTYTSSPNGDE VLVELLICYAGSH VQQLC
Sbjct: 74  YDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAGSHNVQQLC 133

Query: 121 INTYNICIYEWDYCFPMCSSLIELKM--------------------IQCDWSARDERANY 180
           +NTYNI IYEWDYCFP+CSSLIELKM                    IQCDWSARDERANY
Sbjct: 134 VNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSARDERANY 193

Query: 181 NGITMFSGCPNLESLVLVDYLFETATISAPRLEIFKLCASHDMELTFPQVELLTPTLKTV 240
           +GITMFSGCPNLESLVLVDYLFE+ATISAPRLE FKLCASHDMELTFPQVELLTPTLK V
Sbjct: 194 DGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQVELLTPTLKAV 253

Query: 241 NFVNMLPILQSDSEFSCIHKVDIQLEDSVFTTDGSQTQELKSKFIDLLTV 271
           NFVN+LP+L+SDSEFSCI KVDIQL+DSVFTTDGSQTQELKSKFIDLL+V
Sbjct: 254 NFVNVLPVLESDSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSV 303

[Close]
BLAST of Csa5G650440.1 vs. NCBI nr
Match: gi|659119368|ref|XP_008459618.1| (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo])

HSP 1 Score: 427.2 bits (1097), Expect = 2.2e-116
Identity = 221/290 (76.21%), Postives = 230/290 (79.31%), Query Frame = 1 

Query: 1   MNDNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFK 60
           M D+RISLLPD+LLHHILST NTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSS F 
Sbjct: 14  MEDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSFN 73

Query: 61  YDDEESKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNGDECVLVELLICYAGSHKVQQLC 120
           YDDEESKRRSFKFFIFRVLS HCAT+I KLTYTSSPNGDE VLVELLICYAGSH VQQLC
Sbjct: 74  YDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAGSHNVQQLC 133

Query: 121 INTYNICIYEWDYCFPMCSSLIELKM--------------------IQCDWSARDERANY 180
           +NTYNI IYEWDYCFP+CSSLIELKM                    IQCDWSARDERANY
Sbjct: 134 VNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSARDERANY 193

Query: 181 NGITMFSGCPNLESLVLVDYLFETATISAPRLEIFKLCASHDMELTFPQVELLTPTLKTV 240
           +GITMFSGCPNLESLVLVDYLFE+ATISAPRLE FKLCASHDMELTFPQ           
Sbjct: 194 DGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQ----------- 253

Query: 241 NFVNMLPILQSDSEFSCIHKVDIQLEDSVFTTDGSQTQELKSKFIDLLTV 271
                              KVDIQL+DSVFTTDGSQTQELKSKFIDLL+V
Sbjct: 254 -------------------KVDIQLKDSVFTTDGSQTQELKSKFIDLLSV 273

[Close]
BLAST of Csa5G650440.1 vs. NCBI nr
Match: gi|449447767|ref|XP_004141639.1| (PREDICTED: F-box/LRR-repeat protein At3g26922-like [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 5.9e-69
Identity = 161/294 (54.76%), Postives = 201/294 (68.37%), Query Frame = 1 

Query: 3   DNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYD 62
           ++RISLLPD LLH ILS LNTK VVQTC+LSKRWKTLWT IPTLNFDYNS  S S+FK +
Sbjct: 11  EDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTE 70

Query: 63  DEE-SKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNG-DECVLVELLICYAGSHKVQQLC 122
           +++ SK+ SFK FI RVLS     +I KL YTSS N  D  +L + LI YA SH VQQL 
Sbjct: 71  EDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQLF 130

Query: 123 INTYNIC-IYEWDYCFPM--CSSLIELKM--------------------IQCDWSAR-DE 182
           +NT+N+   + WD+C  +  CSSL+ LK+                    I+  W  R D+
Sbjct: 131 LNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERPDK 190

Query: 183 RANYNGITMFSGCPNLESLVLVDYLFETATISAPRLEIFKLCASHDMELTFPQVELLTPT 242
           RAN+  ITMF GCPNLESLV   +LF+TATISAP+L+  KLCAS D + TF +V+LLTPT
Sbjct: 191 RANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLTPT 250

Query: 243 LKTVNFVNMLPILQSDSEFSCIHKVDIQLEDSVFTTDGSQTQELKSKFIDLLTV 271
           L+ ++FVN+LP ++SD EFS I KVDIQL  S F  D   ++  KSKF +LL+V
Sbjct: 251 LENISFVNVLPTVKSDYEFSRIDKVDIQLV-SRFERDDRNSR--KSKFRELLSV 301

[Close]
BLAST of Csa5G650440.1 vs. NCBI nr
Match: gi|700197501|gb|KGN52678.1| (hypothetical protein Csa_5G650430 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 5.9e-69
Identity = 161/294 (54.76%), Postives = 201/294 (68.37%), Query Frame = 1 

Query: 3   DNRISLLPDTLLHHILSTLNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSLFKYD 62
           ++RISLLPD LLH ILS LNTK VVQTC+LSKRWKTLWT IPTLNFDYNS  S S+FK +
Sbjct: 11  EDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTE 70

Query: 63  DEE-SKRRSFKFFIFRVLSIHCATNIHKLTYTSSPNG-DECVLVELLICYAGSHKVQQLC 122
           +++ SK+ SFK FI RVLS     +I KL YTSS N  D  +L + LI YA SH VQQL 
Sbjct: 71  EDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQLF 130

Query: 123 INTYNIC-IYEWDYCFPM--CSSLIELKM--------------------IQCDWSAR-DE 182
           +NT+N+   + WD+C  +  CSSL+ LK+                    I+  W  R D+
Sbjct: 131 LNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERPDK 190

Query: 183 RANYNGITMFSGCPNLESLVLVDYLFETATISAPRLEIFKLCASHDMELTFPQVELLTPT 242
           RAN+  ITMF GCPNLESLV   +LF+TATISAP+L+  KLCAS D + TF +V+LLTPT
Sbjct: 191 RANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLTPT 250

Query: 243 LKTVNFVNMLPILQSDSEFSCIHKVDIQLEDSVFTTDGSQTQELKSKFIDLLTV 271
           L+ ++FVN+LP ++SD EFS I KVDIQL  S F  D   ++  KSKF +LL+V
Sbjct: 251 LENISFVNVLPTVKSDYEFSRIDKVDIQLV-SRFERDDRNSR--KSKFRELLSV 301

The following BLAST results are available for this feature:
BLAST of Csa5G650440.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FDL14_ARATH1.4e-1431.22F-box/FBD/LRR-repeat protein At2g04230 OS=Arabidopsis thaliana GN=At2g04230 PE=2... [more]
FDL48_ARATH1.1e-1128.77Putative F-box/FBD/LRR-repeat protein At4g13965 OS=Arabidopsis thaliana GN=At4g1... [more]
FDL3_ARATH1.9e-1127.71F-box/FBD/LRR-repeat protein At1g16930 OS=Arabidopsis thaliana GN=At1g16930 PE=2... [more]
FDL44_ARATH9.5e-1127.16F-box/FBD/LRR-repeat protein At3g26920 OS=Arabidopsis thaliana GN=At3g26920 PE=2... [more]
FBD41_ARATH1.6e-1034.48FBD-associated F-box protein At5g18780 OS=Arabidopsis thaliana GN=At5g18780 PE=2... [more]
BLAST of Csa5G650440.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUU7_CUCSA2.2e-155100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650440 PE=4 SV=1[more]
A0A0A0KSW6_CUCSA4.1e-6954.76Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650430 PE=4 SV=1[more]
A0A0A0KSW6_CUCSA3.2e-2965.49Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650430 PE=4 SV=1[more]
A0A061FT05_THECC5.0e-2732.99F-box/RNI-like superfamily protein OS=Theobroma cacao GN=TCM_045488 PE=4 SV=1[more]
A0A061FZ54_THECC1.1e-2436.51F-box/RNI-like superfamily protein OS=Theobroma cacao GN=TCM_045483 PE=4 SV=1[more]
BLAST of Csa5G650440.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G04230.18.0e-1631.22 FBD, F-box and Leucine Rich Repeat domains containing protein[more]
AT1G16930.11.1e-1227.71 F-box/RNI-like/FBD-like domains-containing protein[more]
AT5G18780.19.1e-1234.48 F-box/RNI-like superfamily protein[more]
AT4G13960.15.9e-1130.67 F-box/RNI-like superfamily protein[more]
AT3G52680.17.7e-1128.45 F-box/RNI-like/FBD-like domains-containing protein[more]
BLAST of Csa5G650440.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700197502|gb|KGN52679.1|3.1e-155100.00hypothetical protein Csa_5G650440 [Cucumis sativus][more]
gi|659119366|ref|XP_008459617.1|1.9e-13684.83PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo][more]
gi|659119368|ref|XP_008459618.1|2.2e-11676.21PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo][more]
gi|449447767|ref|XP_004141639.1|5.9e-6954.76PREDICTED: F-box/LRR-repeat protein At3g26922-like [Cucumis sativus][more]
gi|700197501|gb|KGN52678.1|5.9e-6954.76hypothetical protein Csa_5G650430 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa5G650440Csa5G650440gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa5G650440.1Csa5G650440.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa5G650440.1.cds1Csa5G650440.1.cds1CDS
Csa5G650440.1.cds2Csa5G650440.1.cds2CDS


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 6..41
score: 1.
IPR001810F-box domainSMARTSM00256fbox_2coord: 9..50
score: 0.
IPR001810F-box domainPROFILEPS50181FBOXcoord: 3..53
score: 9
IPR001810F-box domainunknownSSF81383F-box domaincoord: 4..56
score: 9.8
NoneNo IPR availablePANTHERPTHR32212FAMILY NOT NAMEDcoord: 5..228
score: 3.0