Csa5G351590.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa5G351590.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 13474390 .. 13474593 (+)
Sequence length204
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCACTACAAGAATTCGAGAGTCTCCCGATGCTGGCAAGCGTTGCTATATATGCCTAAAGGCGTTAGGAAAGGATTTCCCGACTTACATGGTGTCATCGGGAAGGAAGTCGACAATAGTGCATCGGGGGAGGCATTCTCAAAGTGCAAATGGGAAGGCATCGAGCATGCTTTACTCTCGGGCCATCAATAACGACAGATAG

mRNA sequence

ATGGTCACTACAAGAATTCGAGAGTCTCCCGATGCTGGCAAGCGTTGCTATATATGCCTAAAGGCGTTAGGAAAGGATTTCCCGACTTACATGGTGTCATCGGGAAGGAAGTCGACAATAGTGCATCGGGGGAGGCATTCTCAAAGTGCAAATGGGAAGGCATCGAGCATGCTTTACTCTCGGGCCATCAATAACGACAGATAG

Coding sequence (CDS)

ATGGTCACTACAAGAATTCGAGAGTCTCCCGATGCTGGCAAGCGTTGCTATATATGCCTAAAGGCGTTAGGAAAGGATTTCCCGACTTACATGGTGTCATCGGGAAGGAAGTCGACAATAGTGCATCGGGGGAGGCATTCTCAAAGTGCAAATGGGAAGGCATCGAGCATGCTTTACTCTCGGGCCATCAATAACGACAGATAG

Protein sequence

MVTTRIRESPDAGKRCYICLKALGKDFPTYMVSSGRKSTIVHRGRHSQSANGKASSMLYSRAINNDR*
Homology
[Close]
BLAST of Csa5G351590.1 vs. TrEMBL
Match: A0A0A0KRC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G351590 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.5e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MVTTRIRESPDAGKRCYICLKALGKDFPTYMVSSGRKSTIVHRGRHSQSANGKASSMLYS 60
          MVTTRIRESPDAGKRCYICLKALGKDFPTYMVSSGRKSTIVHRGRHSQSANGKASSMLYS
Sbjct: 1  MVTTRIRESPDAGKRCYICLKALGKDFPTYMVSSGRKSTIVHRGRHSQSANGKASSMLYS 60

Query: 61 RAINNDR 68
          RAINNDR
Sbjct: 61 RAINNDR 67

[Close]
BLAST of Csa5G351590.1 vs. NCBI nr
Match: gi|700195760|gb|KGN50937.1| (hypothetical protein Csa_5G351590 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 5.1e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1  MVTTRIRESPDAGKRCYICLKALGKDFPTYMVSSGRKSTIVHRGRHSQSANGKASSMLYS 60
          MVTTRIRESPDAGKRCYICLKALGKDFPTYMVSSGRKSTIVHRGRHSQSANGKASSMLYS
Sbjct: 1  MVTTRIRESPDAGKRCYICLKALGKDFPTYMVSSGRKSTIVHRGRHSQSANGKASSMLYS 60

Query: 61 RAINNDR 68
          RAINNDR
Sbjct: 61 RAINNDR 67

The following BLAST results are available for this feature:
BLAST of Csa5G351590.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRC6_CUCSA3.5e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G351590 PE=4 SV=1[more]
BLAST of Csa5G351590.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195760|gb|KGN50937.1|5.1e-30100.00hypothetical protein Csa_5G351590 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa5G351590Csa5G351590gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa5G351590.1Csa5G351590.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa5G351590.1.cds1Csa5G351590.1.cds1CDS