Csa5G161350.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G161350.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	14 kDa proline-rich protein DC2.15, putative; contains IPR016140 (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain)
Location	Chr5 : 6024675 .. 6025007 (+)
Sequence length	333

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAAGCTACCGTCTCTCTAGCATTTCTCCTTGCTCTCAATCTTGTTTTCTCCTCCTTCGTTTACGCTGAGGCTGACAAGAAGTGCCCAATAAACGCTCTTCAGCTCGGTGTTTGTGCAAAATTGCTCGGGGGTGTTGTCGATGTCGAGATCGGCAAGACTTCTTGCTGCCCTTTGATCAGTGGCCTAGTTGATCTTGATGCTGCTGTGTGCCTTTGCACTGCTGTTAAAGCCAAAGTGTTGGGACTGAATCTCAACATTCCCGTCGACCTCTCCTTGATTCTCAATGGCTGCAATAAGAAACTTGTTGAGGGCTTCACATGCTAA

mRNA sequence

ATGGCTTCCAAAGCTACCGTCTCTCTAGCATTTCTCCTTGCTCTCAATCTTGTTTTCTCCTCCTTCGTTTACGCTGAGGCTGACAAGAAGTGCCCAATAAACGCTCTTCAGCTCGGTGTTTGTGCAAAATTGCTCGGGGGTGTTGTCGATGTCGAGATCGGCAAGACTTCTTGCTGCCCTTTGATCAGTGGCCTAGTTGATCTTGATGCTGCTGTGTGCCTTTGCACTGCTGTTAAAGCCAAAGTGTTGGGACTGAATCTCAACATTCCCGTCGACCTCTCCTTGATTCTCAATGGCTGCAATAAGAAACTTGTTGAGGGCTTCACATGCTAA

Coding sequence (CDS)

ATGGCTTCCAAAGCTACCGTCTCTCTAGCATTTCTCCTTGCTCTCAATCTTGTTTTCTCCTCCTTCGTTTACGCTGAGGCTGACAAGAAGTGCCCAATAAACGCTCTTCAGCTCGGTGTTTGTGCAAAATTGCTCGGGGGTGTTGTCGATGTCGAGATCGGCAAGACTTCTTGCTGCCCTTTGATCAGTGGCCTAGTTGATCTTGATGCTGCTGTGTGCCTTTGCACTGCTGTTAAAGCCAAAGTGTTGGGACTGAATCTCAACATTCCCGTCGACCTCTCCTTGATTCTCAATGGCTGCAATAAGAAACTTGTTGAGGGCTTCACATGCTAA

Protein sequence

MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCPLISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC*

Homology

[Close]

BLAST of Csa5G161350.1 vs. Swiss-Prot
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.2e-24
Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 31  CPINALQLGVCAKLLGGVVDVEIGKTS---CCPLISGLVDLDAAVCLCTAVKAKVLGLNL 90
           CPI+AL+LGVCA +L G+++V++G+ S   CC LI GLVDLDAAVCLCTA++A VLG+NL
Sbjct: 99  CPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINL 158

Query: 91  NIPVDLSLILNGCNKKLVEGFTC 111
           N+P+ LS++LN CN++L   F C
Sbjct: 159 NVPISLSVLLNVCNRRLPSNFQC 181

[Close]

BLAST of Csa5G161350.1 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.9e-24
Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 31  CPINALQLGVCAKLLGGVVDVEIGKTS---CCPLISGLVDLDAAVCLCTAVKAKVLGLNL 90
           CPI+AL+LGVCA +L  ++++++G+ S   CC LI GLVDLDAA+CLCTA++A VLG+NL
Sbjct: 85  CPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 144

Query: 91  NIPVDLSLILNGCNKKLVEGFTC 111
           N+P+ LS++LN CN+K+  GF C
Sbjct: 145 NVPISLSVLLNVCNRKVPSGFQC 167

[Close]

BLAST of Csa5G161350.1 vs. Swiss-Prot
Match: ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.9e-24
Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 31  CPINALQLGVCAKLLGGVVDVEIGKTS---CCPLISGLVDLDAAVCLCTAVKAKVLGLNL 90
           CPI+AL+LGVCA +L G+++V++G+ S   CC LI GLVDLDAA+CLCTA++A VLG+NL
Sbjct: 94  CPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 153

Query: 91  NIPVDLSLILNGCNKKLVEGFTC 111
           N+P+ LS++LN CN++L   F C
Sbjct: 154 NVPISLSVLLNVCNRRLPSDFQC 176

[Close]

BLAST of Csa5G161350.1 vs. Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.9e-24
Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 31  CPINALQLGVCAKLLGGVVDVEIGKTS---CCPLISGLVDLDAAVCLCTAVKAKVLGLNL 90
           CPI+AL+LGVCA +L  ++++++G+ S   CC LI GLVD+DAA+CLCTA++A VLG+NL
Sbjct: 78  CPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRANVLGINL 137

Query: 91  NIPVDLSLILNGCNKKLVEGFTC 111
           N+P+ LS++LN CN+KL  GF C
Sbjct: 138 NVPISLSVLLNVCNRKLPSGFQC 160

[Close]

BLAST of Csa5G161350.1 vs. Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-21
Identity = 59/136 (43.38%), Postives = 76/136 (55.88%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFV---------YAEADK--------------KCPINALQ 60
           M SK + S+A    LN++F + V         Y    K              KCP +AL+
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALK 60

Query: 61  LGVCAKLLGGVVDVEIGKTS---CCPLISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLS 111
           LGVCA +L  V +V IG      CC L+ GLV+L+AAVCLCTA+KA +LG NLN+P+ LS
Sbjct: 61  LGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALS 120

[Close]

BLAST of Csa5G161350.1 vs. TrEMBL
Match: A0A0A0KKL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161340 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-54
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCP 60
           MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCP
Sbjct: 1   MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCP 60

Query: 61  LISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC 111
           LISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC
Sbjct: 61  LISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC 110

[Close]

BLAST of Csa5G161350.1 vs. TrEMBL
Match: A0A0A0KR85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161850 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1


Query: 30  KCPINALQLGVCAKLLGGVVDVEIGKTSCCPLISGLVDLDAAVCLCTAVKAKVLGLNLNI 89
           KCPINALQLGVCAKLLGGVVDVEIGKTSCCPLISGLVDLDAAVCLCTAVKAKVLGLNLNI
Sbjct: 94  KCPINALQLGVCAKLLGGVVDVEIGKTSCCPLISGLVDLDAAVCLCTAVKAKVLGLNLNI 153

Query: 90  PVDLSLILNGCNKKLVEGFTC 111
           PVDLSLILNGCNKKLVEGFTC
Sbjct: 154 PVDLSLILNGCNKKLVEGFTC 174

[Close]

BLAST of Csa5G161350.1 vs. TrEMBL
Match: A0A0A0KR80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161310 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.1e-34
Identity = 80/126 (63.49%), Postives = 90/126 (71.43%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFVYAEAD----------------KKCPINALQLGVCAKL 60
           MASKAT +LAFLLALNL F S V+A  D                KKC  N L+LGVCAKL
Sbjct: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60

Query: 61  LGGVVDVEIGKTSCCPLISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKL 111
           LG +VDV +GK+SCCPLI GL DLDAAVCLC+A+KA VLG NLNIP+ LSLILN CNKK+
Sbjct: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV 120

[Close]

BLAST of Csa5G161350.1 vs. TrEMBL
Match: A0A0A0KP86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161860 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.4e-28
Identity = 74/136 (54.41%), Postives = 88/136 (64.71%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFV------YAEADKK-----------------CPINALQ 60
           MASKAT SLAFLL+LNL+F +FV      Y  A  K                 CP +AL+
Sbjct: 1   MASKATASLAFLLSLNLLFFTFVSACDNCYVPAPPKPKPCPPTKPNPPSNYGKCPKDALK 60

Query: 61  LGVCAKLLGGVVDVEIGK---TSCCPLISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLS 111
           +GVCAKLLGG+VD+ IGK   T CC L+ GL DL+AAVCLCTA+KA VLG  + IP+ LS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGKTIKIPLHLS 120

[Close]

BLAST of Csa5G161350.1 vs. TrEMBL
Match: A0A0A0KKU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161870 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.2e-28
Identity = 72/130 (55.38%), Postives = 88/130 (67.69%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFV----------------YAEADK-KCPINALQLGVCAK 60
           MASKAT SLAFLL+LNL+F + V                Y  +D  KCP +AL++GVCAK
Sbjct: 1   MASKATASLAFLLSLNLLFFTLVSSCDNCYVPAPPKPEPYPPSDYGKCPKDALKIGVCAK 60

Query: 61  LLGGVVDVEIGK---TSCCPLISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGC 111
           LLGG+VD+ IGK   T CC L+ GL DL+AAVCLCTA+KA VLG  + IP+ LSL++N C
Sbjct: 61  LLGGLVDLTIGKPPVTPCCTLVEGLADLEAAVCLCTAIKASVLGKMIKIPLHLSLLINVC 120

[Close]

BLAST of Csa5G161350.1 vs. TAIR10
Match: AT2G45180.1 (AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 3.5e-26
Identity = 65/134 (48.51%), Postives = 84/134 (62.69%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFVYA--------------EADKK-------CPINALQLG 60
           MASKA    A L+ LNL+F +FV +              ++ KK       CP + L+LG
Sbjct: 1   MASKALAVTALLITLNLLFFTFVTSTKCPPTTPKPPKTPKSPKKAPAVKPTCPTDTLKLG 60

Query: 61  VCAKLLGGVVDVEIG---KTSCCPLISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLI 111
           VCA LLG +V+V +G   KT CC L+ GL +L+AAVCLCTA+KA VLG+NLN+P+DL+L+
Sbjct: 61  VCADLLG-LVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLGINLNVPIDLTLL 120

[Close]

BLAST of Csa5G161350.1 vs. TAIR10
Match: AT4G12490.1 (AT4G12490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 111.7 bits (278), Expect = 2.9e-25
Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 31  CPINALQLGVCAKLLGGVVDVEIGKTS---CCPLISGLVDLDAAVCLCTAVKAKVLGLNL 90
           CPI+AL+LGVCA +L G+++V++G+ S   CC LI GLVDLDAAVCLCTA++A VLG+NL
Sbjct: 99  CPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINL 158

Query: 91  NIPVDLSLILNGCNKKLVEGFTC 111
           N+P+ LS++LN CN++L   F C
Sbjct: 159 NVPISLSVLLNVCNRRLPSNFQC 181

[Close]

BLAST of Csa5G161350.1 vs. TAIR10
Match: AT4G12480.1 (AT4G12480.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 110.9 bits (276), Expect = 5.0e-25
Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 31  CPINALQLGVCAKLLGGVVDVEIGKTS---CCPLISGLVDLDAAVCLCTAVKAKVLGLNL 90
           CPI+AL+LGVCA +L  ++++++G+ S   CC LI GLVDLDAA+CLCTA++A VLG+NL
Sbjct: 85  CPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 144

Query: 91  NIPVDLSLILNGCNKKLVEGFTC 111
           N+P+ LS++LN CN+K+  GF C
Sbjct: 145 NVPISLSVLLNVCNRKVPSGFQC 167

[Close]

BLAST of Csa5G161350.1 vs. TAIR10
Match: AT4G12500.1 (AT4G12500.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 110.9 bits (276), Expect = 5.0e-25
Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 31  CPINALQLGVCAKLLGGVVDVEIGKTS---CCPLISGLVDLDAAVCLCTAVKAKVLGLNL 90
           CPI+AL+LGVCA +L G+++V++G+ S   CC LI GLVDLDAA+CLCTA++A VLG+NL
Sbjct: 94  CPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 153

Query: 91  NIPVDLSLILNGCNKKLVEGFTC 111
           N+P+ LS++LN CN++L   F C
Sbjct: 154 NVPISLSVLLNVCNRRLPSDFQC 176

[Close]

BLAST of Csa5G161350.1 vs. TAIR10
Match: AT4G12470.1 (AT4G12470.1 azelaic acid induced 1)

HSP 1 Score: 110.9 bits (276), Expect = 5.0e-25
Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 31  CPINALQLGVCAKLLGGVVDVEIGKTS---CCPLISGLVDLDAAVCLCTAVKAKVLGLNL 90
           CPI+AL+LGVCA +L  ++++++G+ S   CC LI GLVD+DAA+CLCTA++A VLG+NL
Sbjct: 78  CPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRANVLGINL 137

Query: 91  NIPVDLSLILNGCNKKLVEGFTC 111
           N+P+ LS++LN CN+KL  GF C
Sbjct: 138 NVPISLSVLLNVCNRKLPSGFQC 160

[Close]

BLAST of Csa5G161350.1 vs. NCBI nr
Match: gi|449469412|ref|XP_004152414.1| (PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 4.8e-54
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCP 60
           MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCP
Sbjct: 1   MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCP 60

Query: 61  LISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC 111
           LISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC
Sbjct: 61  LISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC 110

[Close]

BLAST of Csa5G161350.1 vs. NCBI nr
Match: gi|659073527|ref|XP_008437108.1| (PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 5.7e-47
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCP 60
           MASKATVSLAFLLALNLVFSSFVYAE DKKCPI+ L+LGVCAKLLGGVV VEIGKTSCCP
Sbjct: 1   MASKATVSLAFLLALNLVFSSFVYAEDDKKCPIDTLKLGVCAKLLGGVVGVEIGKTSCCP 60

Query: 61  LISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC 111
           LI G+ DLDAAVCLCTA+KA VLG+ LNIPVDLSLILNGCNKK+VEGF C
Sbjct: 61  LIQGIADLDAAVCLCTALKANVLGVRLNIPVDLSLILNGCNKKIVEGFKC 110

[Close]

BLAST of Csa5G161350.1 vs. NCBI nr
Match: gi|659073523|ref|XP_008437106.1| (PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 2.2e-46
Identity = 94/110 (85.45%), Postives = 101/110 (91.82%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCP 60
           MASKATVSLAFLLALNL+FSSFVYAE DKKCP + L+LGVCAKLLGGVVDVEIGKTSCCP
Sbjct: 1   MASKATVSLAFLLALNLIFSSFVYAEDDKKCPTDTLKLGVCAKLLGGVVDVEIGKTSCCP 60

Query: 61  LISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC 111
           LI GL DLDAAVCLCTA+KA VLG+ LNIPVDLSLILNGCNKK+ +GF C
Sbjct: 61  LIQGLADLDAAVCLCTALKANVLGVRLNIPVDLSLILNGCNKKIAKGFKC 110

[Close]

BLAST of Csa5G161350.1 vs. NCBI nr
Match: gi|659073529|ref|XP_008437109.1| (PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis melo])

HSP 1 Score: 192.2 bits (487), Expect = 4.8e-46
Identity = 94/110 (85.45%), Postives = 101/110 (91.82%), Query Frame = 1


Query: 1   MASKATVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCP 60
           MASKATVSLAFLLALNLVFSSFVYAE D KCPI+ L+LGVCAKLLGGVV VEIGKTSCCP
Sbjct: 1   MASKATVSLAFLLALNLVFSSFVYAEDDNKCPIDTLKLGVCAKLLGGVVGVEIGKTSCCP 60

Query: 61  LISGLVDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC 111
           LI G+ DLDAAVCLCTA+KA VLG+ LNIPVDLSLILNGCNKK+V+GF C
Sbjct: 61  LIQGIADLDAAVCLCTALKANVLGVRLNIPVDLSLILNGCNKKIVDGFKC 110

[Close]

BLAST of Csa5G161350.1 vs. NCBI nr
Match: gi|778708273|ref|XP_011656156.1| (PREDICTED: putative lipid-binding protein AIR1 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-45
Identity = 96/105 (91.43%), Postives = 98/105 (93.33%), Query Frame = 1


Query: 6   TVSLAFLLALNLVFSSFVYAEADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCPLISGL 65
           T S A   +L +VFSSFVYA ADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCPLISGL
Sbjct: 77  TDSTAHGFSLIIVFSSFVYAAADKKCPINALQLGVCAKLLGGVVDVEIGKTSCCPLISGL 136

Query: 66  VDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC 111
           VDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC
Sbjct: 137 VDLDAAVCLCTAVKAKVLGLNLNIPVDLSLILNGCNKKLVEGFTC 181

The following BLAST results are available for this feature:

BLAST of Csa5G161350.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERLL2_ARATH	5.2e-24	60.24	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 ...	[more]
ERLI1_ARATH	8.9e-24	57.83	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1	[more]
ERLL3_ARATH	8.9e-24	59.04	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 ...	[more]
ERLL1_ARATH	8.9e-24	57.83	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1	[more]
14KD_DAUCA	2.4e-21	43.38	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	[more]

BLAST of Csa5G161350.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKL5_CUCSA	3.4e-54	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161340 PE=4 SV=1	[more]
A0A0A0KR85_CUCSA	1.2e-38	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161850 PE=4 SV=1	[more]
A0A0A0KR80_CUCSA	5.1e-34	63.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161310 PE=4 SV=1	[more]
A0A0A0KP86_CUCSA	5.4e-28	54.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161860 PE=4 SV=1	[more]
A0A0A0KKU4_CUCSA	9.2e-28	55.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161870 PE=4 SV=1	[more]

BLAST of Csa5G161350.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45180.1	3.5e-26	48.51	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12490.1	2.9e-25	60.24	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12480.1	5.0e-25	57.83	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12500.1	5.0e-25	59.04	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12470.1	5.0e-25	57.83	azelaic acid induced 1	[more]

BLAST of Csa5G161350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469412\|ref\|XP_004152414.1\|	4.8e-54	100.00	PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis sativus]	[more]
gi\|659073527\|ref\|XP_008437108.1\|	5.7e-47	87.27	PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo]	[more]
gi\|659073523\|ref\|XP_008437106.1\|	2.2e-46	85.45	PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo]	[more]
gi\|659073529\|ref\|XP_008437109.1\|	4.8e-46	85.45	PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis melo]	[more]
gi\|778708273\|ref\|XP_011656156.1\|	1.4e-45	91.43	PREDICTED: putative lipid-binding protein AIR1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store
IPR027923	Hydrophob_seed

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa5G161350	Csa5G161350	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa5G161350.1	Csa5G161350.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa5G161350.1.cds1	Csa5G161350.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 31..110 score: 6.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..110 score: 9.23
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 30..110 score: 2.6
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 29..110 score: 2.0
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 1..110 score: 1.6