Csa4G622770.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAAGGCCAGGCTATAGCATTCTATGTCACAATCAGTTGCATCGCTTTTGTCGTGTCGAAGATCTTCATAGCATTGCTCCTTTACAAGCGCTGGAAAAGAAGACACATAATATATGAAGATGGGATATCAGGTATGAACATTTCCAAATCTGATAAGCAGAACTTGACAAGGAGAATGCATAGAGTTAGTTGAATTAAAGATGGTGCGACTTGCGAGAGTAACAAGTTGTTAGGATACTAACAATAATTTAGACCGAAAGGACTGTATAAATGGCTTAAACAGAGGCGGTACTCTGGTTTACTTTATTTATATATAAAGCCAAATGATCCAGATTCACAAGATGAAAAGAAATAACAAGAAACAACAAGGAAAAATGCAGAAAAGATCATACCAGCCTCTTGGTTTTAAGAGACCCTGGTGGCTGCTGTAGCCCTACCTCCTAAAAGATAAAAATACCCTAGCTACTCCAACCTAATAATCCTATTTATAGACTCACATATTCCTCAGCCCAGGGGGCCCTACCACTCAGAACGTCCTTCCAATCATTTCTCCATAATAATTCCCTGTGCAGTTACTTTTCTACCCTTCCTCCTATAAGTATGGATAATTGGGGGTCTTACAATACCCCTCGGTTCCAAGTTCACCTTGTCCTCAAGGTGGAAGGTGGGAAACTGTTGATTCATTTGGTACACTGCTTCCCAGGTAGCCTCGTTCTCCGGTAGTTCTTTCCATTTCACCAACCACTCGTTGGCCCCCAAGTCCTTATTCCATCGAATGCCCAGTACGGTTTCTGGTTGTAGCTGTAGTTCAAACTCTTCCGTTAGTACTGGTTGTTGGATTTGTACTACATGTGTTTTTCCCAATTTCAGTTTCAGTTGGGAAATATGGAAGACGTCATGAATGGAAGCTTCGGGCGGTAACTGCAGCCTATACGCCACTTCTCCAATTTCTTCAATTATGCGGTAAGGTCCATAGAATTTAGGGGCCAACTTCTCCGATCTCTTTCGTGCTAGAGAATGTTGCCTATAGGGTCGAAGCTTGAGATATACCTCATCTCCCACCTTGAACTTAAGTTCCCTCCTCTTAGAGTCTGCCATTTTCTTCATTCGGTTCTGCGCCACGTTCAGGTTCTCCTTTAGAGCAATCAGTGCTAAATCCCTCTCTTTCAGCATTAGTTCCACCTCATTGTGAGGAGTCTTGTGATTGCCGTATGATAGCAGCGGAGGAGGTGATCGTCCATATACAATCTGGAAGGGATTTGATCTTGAGGAGGCATGGAAAGTTGTATTATACCATAGTTCTGCCCAGGGAATGAACTTATTCCACTTTGTCGGCTGCTCATTACAAAAACACCTCAGATAAGTTTCTACACAACGGTTTACTCTTTCAGTTTGTCCGTCCGTTTGAGGGTGGAATGCCGTACTTCTTTTTAGAAGGGTTCCCATGCTAGCAAATATTTCTTTCCAAAAGTTGCTTATGAAAATTTTATCCCTCGGTTCTTCGAATAAATCCGTGTACTGCTGGAGTAAGACTTGAATCATTGGAGATTCTTCCTCATCCCCCTTCACTCTCTGTACTTCATCCAATTCCCCATCTTCCTCTGCCTCATAGTTCTGCATTTCGAGTAAGAAGCCTTGGTCGTCCTCTTCCCATGTTTTTTCAATAGTTTTCAGAGAGCACTCTGCCCTAATAAGTGAAGGATCTCCTTTTAAGATAAACTGTTTTTTTCCCATCCGAAATGTCATGGTCAGGGATGGCCAGTGTATCTTCATGGTTCCCGTTGTGTTTAACCATTGCATCCCTAGAATCACATCTACACTCCCCAGTTCAATTGCTAAAAAATCAGCCACGATTGTGATCTCTTTAAGTTTTAGTTCTAACCTGTTACACACGCCTCTTCCTTGGCATCTTGTACCATCTCCGATAGTGACTCCAAACGGAGTATGATTCTCTAACTCCAGTCCCACTTCCTCCACAATGTTTAATACGAATGTATATGATCAGGTGGGAAGATGGTCATGTTCAAGTCTCCAGCAACAAAGTCCTTAAAATCAGATGCATTCCTGAAGAAAACACTAAAACTAAACAACAAGGACATCATTGGCTCTGGAGGGCATGGGATTGTTTACAAACTTGCACTAAGTGATTCTATGAGATTTGCTGTGAAAAGACTGAACAGAGGAAGTGCAGAAAGAGATCAAGGATTTGAGAGAGAATTGGAGGCTATGGGCGATATAAAACATCGGAATGTTGTGACGCTTTATGGATACTACACTGCTCCTCACTATAATCTTCTTGTATATGAGCTAATGCCTAATGGAAGTTTGTATGCATATCTACATGGTATATGTATATATATCAAAACCTTCAGTTTTTCTAAACTTCTTAATGATGATATATACATTATTCTGTCCTAAATTTGATGGTACTCAGGAAAATCAAATGAGAAGGTTTTGGATTGGTCATCACGCTACAAAATAGCGGTAGGTGCAGCGAGAGGAATATCATACCTTCATCACGACTGTATCCCACACATCATACATAGAGATATCAAGTCAAGCAACATATTGTTGGATGAAAACATGGACGCTCAAGTGTCTGACTTTGGATTGGCGACGCTGATGGAACCTGACAAGACTCATGTATCAACAATTGTGGCAGGCACATTTGGGTACTTGGCTCCAGGTAGAATTTAACAAGCTATTCTACTTCACCGCTCCCTTGACATGGAAAATACTAACTTCATTTTGGCAGAATACTTTGATACGGGTCGAGCAACGGTGAAAGGAGATGTCTACAGCTTTGGTGTAGTACTTCTCGAGCTCTTAACAGGGAAAAAACCGACTGATGAGGCGTTTATGGAAGAGGGAACTAAACTTGTGACATGGGTAAGCGAATCATGAACCATTTTCAGTAGCCTAAGAAAGTCATAGAGCTTCTAGGTTGGTTGATCATGAATATTGATTCTACAAATGAATAGTTTTTAATTGATGCGTTCGAGTAAACCGTTCCGTTTAAGCCATTCATTTCACCAACAGCCAAGATGTTGCAGTGACATTTTTCATGAGGCAATGGATTGAGTACTCAAGTGCTATAAATTGGAAACATCATTCACATAAAGAGTATATACTTGAACAACAAGCTATTCCTTATCTAATTTTCATGGTGTCATGTAAATGACAGGTGAAAACAGTTGTTCAGGAGAAAAGGGAAGAATATGTACTTGACCGTCGTTTGGGCTGTTGTCCGGTTGATGAGGTTAATGTCGTATTTAGCATTGCATTGAAGTGTCTTGAACCGGAACCCGCTCAGCGTCCAACAATGGCAGAGGTTGTTAAAGTGCTTGAGCAGATAAGGTCAAATAGCAATGTAACGGATTCTTGA ATGGATAAAGGCCAGGCTATAGCATTCTATGTCACAATCAGTTGCATCGCTTTTGTCGTGTCGAAGATCTTCATAGCATTGCTCCTTTACAAGCGCTGGAAAAGAAGACACATAATATATGAAGATGGGATATCAGGAAAATCAAATGAGAAGGTTTTGGATTGGTCATCACGCTACAAAATAGCGGTAGGTGCAGCGAGAGGAATATCATACCTTCATCACGACTGTATCCCACACATCATACATAGAGATATCAAGTCAAGCAACATATTGTTGGATGAAAACATGGACGCTCAAGTGTCTGACTTTGGATTGGCGACGCTGATGGAACCTGACAAGACTCATGTATCAACAATTGTGGCAGGCACATTTGGGTACTTGGCTCCAGAATACTTTGATACGGGTCGAGCAACGGTGAAAGGAGATGTCTACAGCTTTGGTGTAGTACTTCTCGAGCTCTTAACAGGGAAAAAACCGACTGATGAGGCGTTTATGGAAGAGGGAACTAAACTTGTGACATGGGTGAAAACAGTTGTTCAGGAGAAAAGGGAAGAATATGTACTTGACCGTCGTTTGGGCTGTTGTCCGGTTGATGAGGTTAATGTCGTATTTAGCATTGCATTGAAGTGTCTTGAACCGGAACCCGCTCAGCGTCCAACAATGGCAGAGGTTGTTAAAGTGCTTGAGCAGATAAGGTCAAATAGCAATGTAACGGATTCTTGA ATGGATAAAGGCCAGGCTATAGCATTCTATGTCACAATCAGTTGCATCGCTTTTGTCGTGTCGAAGATCTTCATAGCATTGCTCCTTTACAAGCGCTGGAAAAGAAGACACATAATATATGAAGATGGGATATCAGGAAAATCAAATGAGAAGGTTTTGGATTGGTCATCACGCTACAAAATAGCGGTAGGTGCAGCGAGAGGAATATCATACCTTCATCACGACTGTATCCCACACATCATACATAGAGATATCAAGTCAAGCAACATATTGTTGGATGAAAACATGGACGCTCAAGTGTCTGACTTTGGATTGGCGACGCTGATGGAACCTGACAAGACTCATGTATCAACAATTGTGGCAGGCACATTTGGGTACTTGGCTCCAGAATACTTTGATACGGGTCGAGCAACGGTGAAAGGAGATGTCTACAGCTTTGGTGTAGTACTTCTCGAGCTCTTAACAGGGAAAAAACCGACTGATGAGGCGTTTATGGAAGAGGGAACTAAACTTGTGACATGGGTGAAAACAGTTGTTCAGGAGAAAAGGGAAGAATATGTACTTGACCGTCGTTTGGGCTGTTGTCCGGTTGATGAGGTTAATGTCGTATTTAGCATTGCATTGAAGTGTCTTGAACCGGAACCCGCTCAGCGTCCAACAATGGCAGAGGTTGTTAAAGTGCTTGAGCAGATAAGGTCAAATAGCAATGTAACGGATTCTTGA MDKGQAIAFYVTISCIAFVVSKIFIALLLYKRWKRRHIIYEDGISGKSNEKVLDWSSRYKIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDENMDAQVSDFGLATLMEPDKTHVSTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPTDEAFMEEGTKLVTWVKTVVQEKREEYVLDRRLGCCPVDEVNVVFSIALKCLEPEPAQRPTMAEVVKVLEQIRSNSNVTDS*
BLAST of Csa4G622770.1 vs. Swiss-Prot
Match: Y1853_ARATH (Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana GN=At1g78530 PE=2 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 5.5e-79 Identity = 146/185 (78.92%), Postives = 161/185 (87.03%), Query Frame = 1
HSP 2 Score: 61.2 bits (147), Expect = 1.8e-08 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 1
BLAST of Csa4G622770.1 vs. Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 7.8e-57 Identity = 102/177 (57.63%), Postives = 137/177 (77.40%), Query Frame = 1
BLAST of Csa4G622770.1 vs. Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 6.2e-54 Identity = 99/177 (55.93%), Postives = 133/177 (75.14%), Query Frame = 1
BLAST of Csa4G622770.1 vs. Swiss-Prot
Match: EMS1_ARATH (Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana GN=EMS1 PE=1 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.5e-47 Identity = 98/183 (53.55%), Postives = 128/183 (69.95%), Query Frame = 1
BLAST of Csa4G622770.1 vs. Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.6e-47 Identity = 96/214 (44.86%), Postives = 140/214 (65.42%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TrEMBL
Match: A0A0A0KZZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622770 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 4.6e-133 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TrEMBL
Match: M5WHE3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007835mg PE=3 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 1.2e-88 Identity = 159/198 (80.30%), Postives = 181/198 (91.41%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TrEMBL
Match: M5WHE3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007835mg PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.7e-08 Identity = 27/46 (58.70%), Postives = 39/46 (84.78%), Query Frame = 1
HSP 2 Score: 329.7 bits (844), Expect = 2.9e-87 Identity = 160/197 (81.22%), Postives = 178/197 (90.36%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TrEMBL
Match: A0A061F9N5_THECC (Kinase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_032232 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.3e-06 Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 1
HSP 2 Score: 329.7 bits (844), Expect = 2.9e-87 Identity = 160/197 (81.22%), Postives = 178/197 (90.36%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TrEMBL
Match: A0A061FGM4_THECC (Kinase superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_032232 PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.7e-07 Identity = 26/40 (65.00%), Postives = 34/40 (85.00%), Query Frame = 1
HSP 2 Score: 320.9 bits (821), Expect = 1.4e-84 Identity = 156/197 (79.19%), Postives = 176/197 (89.34%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TAIR10
Match: AT1G78530.1 (AT1G78530.1 Protein kinase superfamily protein) HSP 1 Score: 295.4 bits (755), Expect = 3.1e-80 Identity = 146/185 (78.92%), Postives = 161/185 (87.03%), Query Frame = 1
HSP 2 Score: 61.2 bits (147), Expect = 9.9e-10 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TAIR10
Match: AT1G31420.1 (AT1G31420.1 Leucine-rich repeat protein kinase family protein) HSP 1 Score: 221.9 bits (564), Expect = 4.4e-58 Identity = 102/177 (57.63%), Postives = 137/177 (77.40%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TAIR10
Match: AT2G35620.1 (AT2G35620.1 Leucine-rich repeat protein kinase family protein) HSP 1 Score: 212.2 bits (539), Expect = 3.5e-55 Identity = 99/177 (55.93%), Postives = 133/177 (75.14%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TAIR10
Match: AT5G62710.1 (AT5G62710.1 Leucine-rich repeat protein kinase family protein) HSP 1 Score: 212.2 bits (539), Expect = 3.5e-55 Identity = 102/181 (56.35%), Postives = 135/181 (74.59%), Query Frame = 1
BLAST of Csa4G622770.1 vs. TAIR10
Match: AT5G07280.1 (AT5G07280.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 191.0 bits (484), Expect = 8.3e-49 Identity = 98/183 (53.55%), Postives = 128/183 (69.95%), Query Frame = 1
BLAST of Csa4G622770.1 vs. NCBI nr
Match: gi|700199860|gb|KGN55018.1| (hypothetical protein Csa_4G622770 [Cucumis sativus]) HSP 1 Score: 481.9 bits (1239), Expect = 6.6e-133 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1
BLAST of Csa4G622770.1 vs. NCBI nr
Match: gi|778695583|ref|XP_011654019.1| (PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 [Cucumis sativus]) HSP 1 Score: 393.7 bits (1010), Expect = 2.4e-106 Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 1
BLAST of Csa4G622770.1 vs. NCBI nr
Match: gi|778695583|ref|XP_011654019.1| (PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 [Cucumis sativus]) HSP 1 Score: 95.5 bits (236), Expect = 1.3e-16 Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 1
HSP 2 Score: 376.7 bits (966), Expect = 3.0e-101 Identity = 187/197 (94.92%), Postives = 191/197 (96.95%), Query Frame = 1
BLAST of Csa4G622770.1 vs. NCBI nr
Match: gi|659103023|ref|XP_008452434.1| (PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 [Cucumis melo]) HSP 1 Score: 94.0 bits (232), Expect = 3.9e-16 Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1
HSP 2 Score: 335.5 bits (859), Expect = 7.7e-89 Identity = 163/195 (83.59%), Postives = 181/195 (92.82%), Query Frame = 1
BLAST of Csa4G622770.1 vs. NCBI nr
Match: gi|470116012|ref|XP_004294182.1| (PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 [Fragaria vesca subsp. vesca]) HSP 1 Score: 67.0 bits (162), Expect = 5.1e-08 Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 1
HSP 2 Score: 334.3 bits (856), Expect = 1.7e-88 Identity = 159/198 (80.30%), Postives = 181/198 (91.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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