Csa4G418580.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G418580.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	RING finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
Location	Chr4 : 15742269 .. 15745908 (-)
Sequence length	1044

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCACTCTCACTGCAACTCCTCGCTTTCTTCACCGGCGCCTTTTCCCTTCTCTCCGATCACCTCTCCCCGCTCCCATCACTCTTCGCCCAACTTCTCTTTTCATGGACGACGTTCGACCATCCAACTCTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCAAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGACGAAGATGATAATGAATACGAGCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTTTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCATAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCACAATCGTATAAGGTAACTTCTGTTTTGAGGAAAATTTTGTCGGGGTGGGGTTTTTGGTTTGAATTGGTTTCTCTTTTATGTCTAATTTTAGACTGTATTCGGTTTTCCGATGAGTTTACTTATTGGGTTCTTAGAATGATTGTTATGTGAAGATTTTCTGCTACTTTGTGGGGATTTTCATCGAATAGATTACGATCAGTTTAATTAACTATCGGATTATATGCATGTGTCATCCCATATATTATTTTTTTTTTCATTTTCTTCATGGTGTTGGGAGGGGGGAAAGAAAACTACCCAAGTCGTTGGCATAGAGTTCTTTTGGATGTTGAGCTAACTTGATGAATTGAGTTCTACTAGTTTAATTTCGAAGGGATTCTATATTTTGACAGTCGGTTGAATTGAGTATTCTTTTCCATGTCAAATCATAAATTGATACTTTTAGAATGTAGGAGGAAAGTTTTGGTGTCTAATGCAACATTGTTACTGAATTCAGCCATTACTAATGAGGGTGAACTTAGTGACAAGTTTGATAGTTTTGTTATGGTTCTTGTAGAAAAAAAGACATGTTTATTTGAACTTTTTGCTTTTAAAGTGGTTACTATGTGCAGTATACTTAATTTATATTTGGAATGATGTTTTTTCGTCTCATGTAAAGAATGTAGCACGTATTATATATGGTAATGAATTTGATTATGTATGCTAAGAAACTATGTATCACCTAGGTACTTTGGGGTTTCCCCTTGGTAAAGGACTTGCTTAGGTATCTTTATTTCATTTATGGTAATAAATCTTGTTTCTCCATTTAAAAATTTATTGGATTAGGTTTTTGGTTTCCATGTCTCTGAAGGATTTTACACTTATTAGCAGGAATTTATTTCCAGTCAAGATATTTGCACGTTTACTTATTTTTCTTCTTGTGACAATACATGTAGATGTTTCATCAATCTTTGTATTTTCAGTCTTGTTCAACTCTCTTTTTACCCCCTCTGTTTTTTCCCTAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATCTGGTGGGTATTTGGATTCTATTGGATTGTCATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTTAATACTCTCTCTTAGGGTCTTGAAACCCTTTTCTTTCTCTACCTAACCATGCCTGTGGTTTATCAGCAAATTAGTAGAATAATGATGTAATATGGAATATACCAGTTTGCTTGAAATGTATTCGCTCTCCATCACTAGCTATCGCAGCTTCTAAAATTCCATTAGATTTACTAGTTTCTCAAATTACTTTGTGAGAATAAATAATGCATCTTCATTTTGTGATCTCGATTCCGATATAACTTCCCGTAAATGTGTGAGTCTAAAATATGTTATTTTGTGATAAATGCGCTTTCCTTTTCACTAACTCCTGTTCATCACTGAAAGAAGCACTCAGGTCGTGTTTTCATATTATTTTCTAGTTACTTTGAGTTTCTGCTTCTGGACCTGTGGTTATATTTCCCTTGAGTTCTACATTGTTTCTTGGTGATACCTTTTTTGTTGTTGTTGTTGTTGTCGTTGTCGTTATCATTTCAATATCATTGTCATATTTGTATGAAAACTTCTCGTTTGTCTTGATGGAAGTCAAATATGAGGCTTCACTGATGGACTCATGATATCAAATGCAGGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGTGAGCAACAATCTTATTTGTACTTTCATTCTCTTTTCATACCACCATGGATAAATGAAAATTTTTCTATCTCAGTTTGTTTCTAAATTCTAAAGAATTTCTACCACAAGAGTATTTATGAAACATTTATGAAAAGTTCAAGGGTAATATTACAACTTTTGAAAGTATAAGAATTTTTTAAAAATAAATGCCAAAGTTCAAGGATATTTGTTATAATTTAACCAATAATTTATCTGCACAGTTTCTACTTTTACCCCGTATCATCATACTCATAAAATAGACATCTTGTATTGTTACTTCGACAAAATTTTCCTATTTTTACATGTATACCATCAACAAAGGTATCCTGGTTACCTTTACAAGATATTTCTCCATGGAGTTTTCTTCTTTTAAAATGCTTTATCTGACACAAACTGAATCATGATTCCTTGTTTTAGAAGAATCTTTTTTTATCCTTCATAGTGCCTTTTATCATAGCATTGTAGGACTCTTTGCTATTTGATTAACTCTATGGTATTATATTTGCAGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCTCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGATTCAACTTTTGATCAAGTCGGAGCATTCTTGAGGCTGGGACAAGATCTTTGACAACATAACCACACACAGGTCACGTATATCATCTCTTAACATATGTTGATTTGAGATTGAGACGGGTAGGGCAATGGGAGGGTAAAGCCTTGTTGAAAGGGAGGCCTTGCCTTTTCTTCTTTTTTTCTCTCTCTTTGAAAAGAGGAAATAATTTCCTTAATGGCCAAATTGTAGATAGCTTCTTTCTTTCGTTTTGAGATTACTTAGGAGGCCAGATTAGTGGGGAATACTGTGAATAGAATTTGATGCACAGCTTACTAACTTATATATGCTACTAAGAAGACTACTTAGTTGATAGTAACAATTTCAGTAAATAAAGGCAAAGAAGCCATTTGCTTGCTCAATATTAAGCCC

mRNA sequence

ATGGACGACGTTCGACCATCCAACTCTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCAAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGACGAAGATGATAATGAATACGAGCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTTTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCATAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCACAATCGTATAAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATCTGGTGGGTATTTGGATTCTATTGGATTGTCATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCTCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGA

Coding sequence (CDS)

ATGGACGACGTTCGACCATCCAACTCTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCAAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGACGAAGATGATAATGAATACGAGCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTTTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCATAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCACAATCGTATAAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATCTGGTGGGTATTTGGATTCTATTGGATTGTCATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCTCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGA

Protein sequence

MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV*

Homology

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BLAST of Csa4G418580.1 vs. Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.9e-66
Identity = 126/283 (44.52%), Postives = 169/283 (59.72%), Query Frame = 1


Query: 70  SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++ LD+ WNL FV + V VL+LS +EKP  PLR W+ GY +QC  H+  V V Y 
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYR 163

Query: 130 RRSSRYR------LGFENRGAQDELRLSHNRIR-----VMKRLEALNTMVAYIWWVFGFY 189
           RR  R         G  N  +Q  + L+    R       K LE+ NTM ++IWW+ GFY
Sbjct: 164 RRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFY 223

Query: 190 WIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMN 249
           W+  GGQ L   SP+LYWL ++FL FDVFF++FC  +A V   AVCC +P  +A  Y + 
Sbjct: 224 WVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVA 283

Query: 250 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 309
             EGAS+++I  +PK+RF +   +E      +   G+  E G +    E +L+ ED+ CC
Sbjct: 284 DQEGASKNDIDQMPKFRFTKTGNVEKLSGKAR---GIMTECGTDS-PIERSLSPEDAECC 343

Query: 310 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 341
           ICL +Y  GV+L  LPCNHHFH  CI KWL IN+ CPLCKF+I
Sbjct: 344 ICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382

[Close]

BLAST of Csa4G418580.1 vs. Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-65
Identity = 130/310 (41.94%), Postives = 175/310 (56.45%), Query Frame = 1


Query: 70  SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++VLD+ WNL FV ++  +LV+S +E P  PLR WL GYA+QC+ H+  V V Y 
Sbjct: 95  AYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYR 154

Query: 130 RRSSR---------------------------YRLGFENRGAQDELRLSH---NRIRVMK 189
           RR+ R                             LG        +L L H       V K
Sbjct: 155 RRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAK 214

Query: 190 RLEALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG 249
            LE+ NTM ++IWW+ GFYW+  GGQ L + SPR+YWL++VFL FDVFF++FC  +A V 
Sbjct: 215 HLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVI 274

Query: 250 FFAVCCIIP-FLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEV--GMTL 309
             AVCC +P  +A  Y +   EGAS+++I  L K++F +        ND+ Q    G+  
Sbjct: 275 GIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMT 334

Query: 310 EPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLC 347
           E G +    EHTL  ED+ CCICL+ Y  G +L  LPC HHFH  C+ KWL INATCPLC
Sbjct: 335 ECGTDS-PIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLC 394

[Close]

BLAST of Csa4G418580.1 vs. Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 249.2 bits (635), Expect = 6.6e-65
Identity = 139/358 (38.83%), Postives = 196/358 (54.75%), Query Frame = 1


Query: 16  RTMSSRFALPLIQDAAN--LIMEHRGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIK 75
           R    R A  L++ A++  ++M    ++  + A  ++++ + D  Y             K
Sbjct: 25  RRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYS------------K 84

Query: 76  PILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSS 135
           P++VLD  WNL FV ++  VLVLS++E P  PLR W+ GY +QC+ H+  V V Y RR+S
Sbjct: 85  PVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNS 144

Query: 136 RYRLGFENRGA------------QDELRLSHNRIR--------------VMKRLEALNTM 195
           R R     R +            ++ L LS N                   K LE+ NTM
Sbjct: 145 RRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTM 204

Query: 196 VAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCII 255
           +++IWWV GFYW+  GGQ L +GSP+LYWL +VFL FDVFF++FC  +A V   AVCC +
Sbjct: 205 ISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCL 264

Query: 256 P-FLAYGYTMNFLEGASEDEIRALPKYRFHQ--DNPLESFDNDKKQ--EVGMTLEPGYNG 315
           P  +A  Y +   EGAS+++I  L K++F +  D    + D ++ Q    G+  E G + 
Sbjct: 265 PCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDS 324

Query: 316 HTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 341
              EH L  ED+ CCICL+ Y    +L  LPC HHFH  C+ KWL INATCPLCK++I
Sbjct: 325 -PVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369

[Close]

BLAST of Csa4G418580.1 vs. Swiss-Prot
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.3e-62
Identity = 122/295 (41.36%), Postives = 175/295 (59.32%), Query Frame = 1


Query: 71  FIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++  D+ WN   V  S ++LV + EE+P  P+R W+  Y +QCLFHV  V+  Y R
Sbjct: 73  YSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR 132

Query: 131 RSSR-------------YRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGF 190
           R+S              Y + ++     D+   +++ +   KR E++NT++++IWW+ GF
Sbjct: 133 RNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFV---KRCESINTVISFIWWIIGF 192

Query: 191 YWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTM 250
           YW+V GG  LL  +P LYWL+V+FLA DVFF +FC  +A +   A+CC +P  +A  Y +
Sbjct: 193 YWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAV 252

Query: 251 NFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPG------YNG--HTTEHT 310
              EG SE E+  LP Y+F      ++F +++K   G    PG       NG    TE T
Sbjct: 253 AGTEGVSEAELGVLPLYKF------KAFHSNEKNITG----PGKMVPIPINGLCLATERT 312

Query: 311 LNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQG 344
           L AED+ CCICL+ Y  G +L  LPCNHHFH+ CIVKWL++ ATCPLCK++I +G
Sbjct: 313 LLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKG 354

[Close]

BLAST of Csa4G418580.1 vs. Swiss-Prot
Match: RF12B_XENLA (E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.9e-10
Identity = 36/110 (32.73%), Postives = 56/110 (50.91%), Query Frame = 1


Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           G + +E  +LP     Q   L   D+D+ +  G+T E   N  T  +  N     C +C+
Sbjct: 650 GVTLEESGSLPFLSLAQFFLLNEDDDDQPR--GLTKEQIDNLSTRNYGENDALKTCSVCI 709

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI---GQGDSLV 348
            +Y  G +L  LPC+H +H  CI +WL  N+TCP+C+ ++   G  +S+V
Sbjct: 710 TEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVAGNRESIV 757

[Close]

BLAST of Csa4G418580.1 vs. TrEMBL
Match: A0A0A0KYD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G418580 PE=4 SV=1)

HSP 1 Score: 727.2 bits (1876), Expect = 9.1e-207
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLE 240
           VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLE
Sbjct: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL
Sbjct: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV
Sbjct: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 347

[Close]

BLAST of Csa4G418580.1 vs. TrEMBL
Match: A0A0A0LEQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816170 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.4e-92
Identity = 178/346 (51.45%), Postives = 229/346 (66.18%), Query Frame = 1


Query: 4   VRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRG-VIFGDCADPRVDDDEDDNEYERR 63
           +RP+ +  L    T+S+ F +PL +    LI   R   +  DCA+    D  D +++ RR
Sbjct: 7   LRPTLNHSLLRYPTVSTTFTIPLTRYTTRLISSDRHRPLLADCAE----DHSDSDDFSRR 66

Query: 64  VLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVF 123
              R   S+  PILVLD+ WNL FV +SV+VL  +  E+P+ PLR W+SGY +QCL HV 
Sbjct: 67  SFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVG 126

Query: 124 FVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVM 183
           FVF  Y R  + +  GFE+R A            +MKRLE++NTM + +WWVFGFYWIVM
Sbjct: 127 FVFFEYQRSMAHH--GFEDRTAHRS---------IMKRLESMNTMTSSVWWVFGFYWIVM 186

Query: 184 GGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLEGA 243
           GGQALL+ SPRLYWL VVFLAFD+FFI+FC GMA V FF++CC IP +A+ Y M   EGA
Sbjct: 187 GGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIPIVAFAYAMTTREGA 246

Query: 244 SEDEIRALPKYRFHQDNPLESFDNDKKQE-VGMTLEPGYNGHTTEHTLNAEDSACCICLA 303
           SE++IR LPKY F Q   L +F+  K++E +G T+E   +    E  L+ EDS CCICL+
Sbjct: 247 SEEDIRTLPKYTFRQ-AVLGTFNLGKEREPIGSTVELDNSHRIKELALHPEDSECCICLS 306

Query: 304 QYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           +Y  G +L  LPCNHHFH  CI KWLRINATCPLCK +I QGD+LV
Sbjct: 307 RYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQGDTLV 336

[Close]

BLAST of Csa4G418580.1 vs. TrEMBL
Match: F6HQS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00310 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.8e-86
Identity = 164/338 (48.52%), Postives = 222/338 (65.68%), Query Frame = 1


Query: 10  GFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYERRVLFRNGS 69
           GF+S   ++S+  +LPL +    LI      +  DC  PR +D +D +  +       G 
Sbjct: 69  GFMS--NSLSTSLSLPLARYTTRLITGEHHSLLWDCTQPRSEDYDDRHMSDGG---GGGG 128

Query: 70  SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
            F KPI+VLD+ WNL FV +S++VL+ + +E+P+ PLR W+ GYA+QCL HV FV   + 
Sbjct: 129 DFSKPIVVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFR 188

Query: 130 RRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGGQALLE 189
           RR+     G E+R +            ++KRLE++NTM + +WWVFGF WI+ GGQ L++
Sbjct: 189 RRN-----GNEDRHSS-----------IVKRLESMNTMFSSVWWVFGFCWILAGGQVLMQ 248

Query: 190 GSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLEGASEDEIRA 249
            SPRLYWLAVVFLAFDVFF++FC GMA + FFA+ C IP  A  Y M   EGASED+IR 
Sbjct: 249 DSPRLYWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIPLAAIAYAMKIREGASEDDIRL 308

Query: 250 LPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVHGVQL 309
           LP+YRF   + +   D+DKKQ +   +E G +   ++  L+ EDS CCICL++YV G +L
Sbjct: 309 LPRYRFCDASLVRKVDDDKKQALEAAVELGSSSSISDLALHPEDSECCICLSRYVDGAEL 368

Query: 310 CMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
            +LPCNHHFH  CI +WLRINATCPLCKF+I +GD LV
Sbjct: 369 YILPCNHHFHCGCISRWLRINATCPLCKFNILRGDMLV 385

[Close]

BLAST of Csa4G418580.1 vs. TrEMBL
Match: V7CXA2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G116400g PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82
Identity = 152/310 (49.03%), Postives = 196/310 (63.23%), Query Frame = 1


Query: 38  RGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLS 97
           R +   DCAD R DDD+                + + +LVLD+ WNL FV ++  VL+ +
Sbjct: 38  RRLFLSDCADRRSDDDDGSE-----------CGYSRAVLVLDMVWNLAFVVVAAGVLLST 97

Query: 98  AEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRV 157
             E+P+ PLR WL GYA +C+ H+ FVF  +              G +D    SH    +
Sbjct: 98  LRERPSTPLRLWLCGYAFECILHMAFVFFEF------------RSGVRDSF--SHTTYSI 157

Query: 158 MKRLEALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAF 217
           +K+LE +NT+ + +WWVFGFYWIV GGQALLE SPRLYWL VVFLAFD+FFIIFC GMA 
Sbjct: 158 VKKLEPMNTLASSVWWVFGFYWIVAGGQALLEDSPRLYWLTVVFLAFDIFFIIFCIGMAC 217

Query: 218 VGFFAVCCIIPFLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLE 277
           V FFA+ CIIP +A  Y M   EGASE++IR+LP Y F Q N L   D++KKQ V   ++
Sbjct: 218 VVFFALFCIIPIIALAYAMKIREGASEEDIRSLPMYMFSQSNSLVMVDDNKKQLVNARVD 277

Query: 278 PGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCK 337
                H +E +LN++DS CCICL  Y  G ++  LPC HHFH  CI +WLR  ATCPLCK
Sbjct: 278 SCNGSHMSELSLNSDDSECCICLCPYADGAEVYRLPCTHHFHCECIGRWLRTKATCPLCK 322

Query: 338 FSIGQGDSLV 348
           F+I +GD+LV
Sbjct: 338 FNILRGDTLV 322

[Close]

BLAST of Csa4G418580.1 vs. TrEMBL
Match: A0A0S3RWX1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G255800 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-81
Identity = 152/310 (49.03%), Postives = 197/310 (63.55%), Query Frame = 1


Query: 38  RGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLS 97
           R +   DCAD R DDD+                + + +LVLD+ WNL FV ++  VL+ +
Sbjct: 38  RRLFLSDCADGRSDDDDGAE-----------CGYSRAVLVLDMVWNLAFVVVAAGVLLST 97

Query: 98  AEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRV 157
             E+P+ PLR WL GYA +C+ H+ FVF         +R+G  +  A       H    +
Sbjct: 98  LSERPSTPLRLWLCGYAFECVLHMTFVFF-------EFRVGVRDSFA-------HTTYCI 157

Query: 158 MKRLEALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAF 217
           +K+LE +NT+ + +WWVFGFYWIV+GGQALLE SPRLYWL VVFLAFD+FFIIFC GMA 
Sbjct: 158 VKKLEPINTLASSVWWVFGFYWIVVGGQALLEDSPRLYWLTVVFLAFDIFFIIFCIGMAC 217

Query: 218 VGFFAVCCIIPFLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLE 277
           V FFA+ CIIP +A  Y M   EGASE++IR+LP Y F Q N L   D++KKQ V   ++
Sbjct: 218 VVFFALFCIIPIIALAYAMKIREGASEEDIRSLPMYMFSQSNSLVMVDDNKKQLVNTKVD 277

Query: 278 PGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCK 337
                H +E +LN +DS CCICL  Y  G ++  LPC HHFH  CI +WLR  ATCPLCK
Sbjct: 278 SCNGSHMSELSLNPDDSECCICLCPYADGAEVYRLPCTHHFHCECIGRWLRSKATCPLCK 322

Query: 338 FSIGQGDSLV 348
           F+I +GD+LV
Sbjct: 338 FNILRGDTLV 322

[Close]

BLAST of Csa4G418580.1 vs. TAIR10
Match: AT1G68070.1 (AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 262.7 bits (670), Expect = 3.2e-70
Identity = 125/285 (43.86%), Postives = 181/285 (63.51%), Query Frame = 1


Query: 71  FIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++ LD+ WN  FV +++++L++  EEKP  P+R W+ GYA+QCL HV  V++ + +
Sbjct: 64  YSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRK 123

Query: 131 RSSRYRLG------FENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGG 190
           R++R R G        N+ ++DE   +  R    K  E++NT+++++WW+ GFYW+V GG
Sbjct: 124 RNARSRPGDLEAAQATNQDSEDED--NDERFLSTKTCESMNTIISFVWWIVGFYWLVSGG 183

Query: 191 QALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMNFLEGAS 250
             LL+ +  LYWL  VFLAFDVFF IFC  +A +   A+CC +P  +A  Y +   EGAS
Sbjct: 184 DILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVAGQEGAS 243

Query: 251 EDEIRALPKYRFHQDNPLESFDNDKKQEVG----MTLEPGYNGHTTEHTLNAEDSACCIC 310
           E ++  LPKYRFH      + +ND+KQ  G    + ++        E  L  ED+ CCIC
Sbjct: 244 EADLSILPKYRFH------TMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADCCIC 303

Query: 311 LAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGD 345
           L+ Y  G +L  LPCNHHFH+ CIVKWL++NATCPLCKF+I +G+
Sbjct: 304 LSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGN 340

[Close]

BLAST of Csa4G418580.1 vs. TAIR10
Match: AT4G11680.1 (AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 252.7 bits (644), Expect = 3.3e-67
Identity = 126/283 (44.52%), Postives = 169/283 (59.72%), Query Frame = 1


Query: 70  SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++ LD+ WNL FV + V VL+LS +EKP  PLR W+ GY +QC  H+  V V Y 
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYR 163

Query: 130 RRSSRYR------LGFENRGAQDELRLSHNRIR-----VMKRLEALNTMVAYIWWVFGFY 189
           RR  R         G  N  +Q  + L+    R       K LE+ NTM ++IWW+ GFY
Sbjct: 164 RRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFY 223

Query: 190 WIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMN 249
           W+  GGQ L   SP+LYWL ++FL FDVFF++FC  +A V   AVCC +P  +A  Y + 
Sbjct: 224 WVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVA 283

Query: 250 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 309
             EGAS+++I  +PK+RF +   +E      +   G+  E G +    E +L+ ED+ CC
Sbjct: 284 DQEGASKNDIDQMPKFRFTKTGNVEKLSGKAR---GIMTECGTDS-PIERSLSPEDAECC 343

Query: 310 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 341
           ICL +Y  GV+L  LPCNHHFH  CI KWL IN+ CPLCKF+I
Sbjct: 344 ICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382

[Close]

BLAST of Csa4G418580.1 vs. TAIR10
Match: AT1G12760.1 (AT1G12760.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 251.5 bits (641), Expect = 7.4e-67
Identity = 130/310 (41.94%), Postives = 175/310 (56.45%), Query Frame = 1


Query: 70  SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++VLD+ WNL FV ++  +LV+S +E P  PLR WL GYA+QC+ H+  V V Y 
Sbjct: 95  AYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYR 154

Query: 130 RRSSR---------------------------YRLGFENRGAQDELRLSH---NRIRVMK 189
           RR+ R                             LG        +L L H       V K
Sbjct: 155 RRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAK 214

Query: 190 RLEALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG 249
            LE+ NTM ++IWW+ GFYW+  GGQ L + SPR+YWL++VFL FDVFF++FC  +A V 
Sbjct: 215 HLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVI 274

Query: 250 FFAVCCIIP-FLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEV--GMTL 309
             AVCC +P  +A  Y +   EGAS+++I  L K++F +        ND+ Q    G+  
Sbjct: 275 GIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMT 334

Query: 310 EPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLC 347
           E G +    EHTL  ED+ CCICL+ Y  G +L  LPC HHFH  C+ KWL INATCPLC
Sbjct: 335 ECGTDS-PIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLC 394

[Close]

BLAST of Csa4G418580.1 vs. TAIR10
Match: AT1G63170.1 (AT1G63170.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 249.2 bits (635), Expect = 3.7e-66
Identity = 139/358 (38.83%), Postives = 196/358 (54.75%), Query Frame = 1


Query: 16  RTMSSRFALPLIQDAAN--LIMEHRGVIFGDCADPRVDDDEDDNEYERRVLFRNGSSFIK 75
           R    R A  L++ A++  ++M    ++  + A  ++++ + D  Y             K
Sbjct: 25  RRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYS------------K 84

Query: 76  PILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSS 135
           P++VLD  WNL FV ++  VLVLS++E P  PLR W+ GY +QC+ H+  V V Y RR+S
Sbjct: 85  PVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNS 144

Query: 136 RYRLGFENRGA------------QDELRLSHNRIR--------------VMKRLEALNTM 195
           R R     R +            ++ L LS N                   K LE+ NTM
Sbjct: 145 RRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTM 204

Query: 196 VAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCII 255
           +++IWWV GFYW+  GGQ L +GSP+LYWL +VFL FDVFF++FC  +A V   AVCC +
Sbjct: 205 ISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCL 264

Query: 256 P-FLAYGYTMNFLEGASEDEIRALPKYRFHQ--DNPLESFDNDKKQ--EVGMTLEPGYNG 315
           P  +A  Y +   EGAS+++I  L K++F +  D    + D ++ Q    G+  E G + 
Sbjct: 265 PCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDS 324

Query: 316 HTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 341
              EH L  ED+ CCICL+ Y    +L  LPC HHFH  C+ KWL INATCPLCK++I
Sbjct: 325 -PVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369

[Close]

BLAST of Csa4G418580.1 vs. TAIR10
Match: AT2G01735.1 (AT2G01735.1 RING-finger protein for embryogenesis)

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-63
Identity = 122/295 (41.36%), Postives = 175/295 (59.32%), Query Frame = 1


Query: 71  FIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++  D+ WN   V  S ++LV + EE+P  P+R W+  Y +QCLFHV  V+  Y R
Sbjct: 73  YSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR 132

Query: 131 RSSR-------------YRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGF 190
           R+S              Y + ++     D+   +++ +   KR E++NT++++IWW+ GF
Sbjct: 133 RNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFV---KRCESINTVISFIWWIIGF 192

Query: 191 YWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTM 250
           YW+V GG  LL  +P LYWL+V+FLA DVFF +FC  +A +   A+CC +P  +A  Y +
Sbjct: 193 YWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAV 252

Query: 251 NFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPG------YNG--HTTEHT 310
              EG SE E+  LP Y+F      ++F +++K   G    PG       NG    TE T
Sbjct: 253 AGTEGVSEAELGVLPLYKF------KAFHSNEKNITG----PGKMVPIPINGLCLATERT 312

Query: 311 LNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQG 344
           L AED+ CCICL+ Y  G +L  LPCNHHFH+ CIVKWL++ ATCPLCK++I +G
Sbjct: 313 LLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKG 354

[Close]

BLAST of Csa4G418580.1 vs. NCBI nr
Match: gi|449453127|ref|XP_004144310.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus])

HSP 1 Score: 727.2 bits (1876), Expect = 1.3e-206
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLE 240
           VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLE
Sbjct: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL
Sbjct: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV
Sbjct: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 347

[Close]

BLAST of Csa4G418580.1 vs. NCBI nr
Match: gi|659111585|ref|XP_008455807.1| (PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Cucumis melo])

HSP 1 Score: 397.9 bits (1021), Expect = 1.8e-107
Identity = 192/196 (97.96%), Postives = 194/196 (98.98%), Query Frame = 1


Query: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYW 197
           VMGGQALLEGSPRLYW
Sbjct: 181 VMGGQALLEGSPRLYW 196

[Close]

BLAST of Csa4G418580.1 vs. NCBI nr
Match: gi|659085035|ref|XP_008443208.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo])

HSP 1 Score: 347.1 bits (889), Expect = 3.7e-92
Identity = 176/346 (50.87%), Postives = 227/346 (65.61%), Query Frame = 1


Query: 4   VRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRG-VIFGDCADPRVDDDEDDNEYERR 63
           +RP+ +  L    T+S+ F +PL +    LI   R   +  DCA+    D  D +++ RR
Sbjct: 7   LRPTLNHSLLRYPTVSTTFTIPLTRYTTRLISSDRHRPLLADCAE----DHSDSDDFSRR 66

Query: 64  VLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVF 123
              R   S+  PILVLD+ WNL FV +SV+VL  +  E+P+ PLR W+SGY +QCL HV 
Sbjct: 67  SFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVG 126

Query: 124 FVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVM 183
           FVF  Y R  + +  GFE+R A            +MKRLE++NTM + +WWVFGFYWIVM
Sbjct: 127 FVFFEYQRSMAHH--GFEDRAAHRS---------IMKRLESMNTMTSSVWWVFGFYWIVM 186

Query: 184 GGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLEGA 243
           GGQALL+ SPRLYWL VVFLAFD+FFI+FC GMA V FF++CC IP +A+ Y M   EGA
Sbjct: 187 GGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIPIVAFAYAMTTREGA 246

Query: 244 SEDEIRALPKYRFHQDNPLESFDNDKKQE-VGMTLEPGYNGHTTEHTLNAEDSACCICLA 303
           SE++IR LPKY F Q   L +F+  K++E +  T+E        E  L+ EDS CCICL+
Sbjct: 247 SEEDIRTLPKYTFRQAAVLGTFNLGKEREPISSTVELDNGHRIKELALHPEDSECCICLS 306

Query: 304 QYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           +Y  G +L  LPCNHHFH  CI KWLRINATCPLCK +I +GD+LV
Sbjct: 307 RYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRRGDTLV 337

[Close]

BLAST of Csa4G418580.1 vs. NCBI nr
Match: gi|449437970|ref|XP_004136763.1| (PREDICTED: E3 ubiquitin-protein ligase At1g12760 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 4.8e-92
Identity = 178/346 (51.45%), Postives = 229/346 (66.18%), Query Frame = 1


Query: 4   VRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRG-VIFGDCADPRVDDDEDDNEYERR 63
           +RP+ +  L    T+S+ F +PL +    LI   R   +  DCA+    D  D +++ RR
Sbjct: 7   LRPTLNHSLLRYPTVSTTFTIPLTRYTTRLISSDRHRPLLADCAE----DHSDSDDFSRR 66

Query: 64  VLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVF 123
              R   S+  PILVLD+ WNL FV +SV+VL  +  E+P+ PLR W+SGY +QCL HV 
Sbjct: 67  SFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVG 126

Query: 124 FVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVM 183
           FVF  Y R  + +  GFE+R A            +MKRLE++NTM + +WWVFGFYWIVM
Sbjct: 127 FVFFEYQRSMAHH--GFEDRTAHRS---------IMKRLESMNTMTSSVWWVFGFYWIVM 186

Query: 184 GGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLEGA 243
           GGQALL+ SPRLYWL VVFLAFD+FFI+FC GMA V FF++CC IP +A+ Y M   EGA
Sbjct: 187 GGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIPIVAFAYAMTTREGA 246

Query: 244 SEDEIRALPKYRFHQDNPLESFDNDKKQE-VGMTLEPGYNGHTTEHTLNAEDSACCICLA 303
           SE++IR LPKY F Q   L +F+  K++E +G T+E   +    E  L+ EDS CCICL+
Sbjct: 247 SEEDIRTLPKYTFRQ-AVLGTFNLGKEREPIGSTVELDNSHRIKELALHPEDSECCICLS 306

Query: 304 QYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           +Y  G +L  LPCNHHFH  CI KWLRINATCPLCK +I QGD+LV
Sbjct: 307 RYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQGDTLV 336

[Close]

BLAST of Csa4G418580.1 vs. NCBI nr
Match: gi|1009141888|ref|XP_015888427.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Ziziphus jujuba])

HSP 1 Score: 338.2 bits (866), Expect = 1.7e-89
Identity = 165/334 (49.40%), Postives = 225/334 (67.37%), Query Frame = 1


Query: 19  SSRFALPLIQDAANLIM--EHRGVIFGDCADPR--VDDDEDDNEYERRVLFRNGSSFIKP 78
           ++ F+LPL +    L+   +   ++ GDC   +   D  +DD++ + R  +    ++ KP
Sbjct: 28  TTTFSLPLSRYTTQLLSAADRHRILLGDCVGTQSVADVVDDDDDEDGRSFYGEACAYSKP 87

Query: 79  ILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSR 138
           ++VLD+ WNL FV +SV+VL+ S  E+P++PLR W++GYA+QCL HV  V+  Y ++   
Sbjct: 88  VMVLDVVWNLAFVMVSVVVLLSSFRERPSSPLRIWVAGYALQCLLHVGCVYFDYQKQ--- 147

Query: 139 YRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGGQALLEGSPRL 198
           +R   E     D    S+ R    KRLE +NT+++ +WW+ GFYWIV+GGQALL+ SPRL
Sbjct: 148 WRADLEGL---DGFSSSYKRTSNAKRLETMNTLMSSLWWIIGFYWIVVGGQALLQDSPRL 207

Query: 199 YWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLEGASEDEIRALPKYR 258
           YWL +VFLAFDVFFIIFC GMA V FF +CC +P LA+ Y M   EGASEDEI+ LPKYR
Sbjct: 208 YWLTMVFLAFDVFFIIFCIGMACVIFFGLCCFLPILAFAYAMAIREGASEDEIQTLPKYR 267

Query: 259 FHQDNPLESFDNDKKQEVGM-TLEPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLP 318
           FH  NP  + DNDKK E+ +  L+   + +  E  L++EDS CCICL+ Y  G +L  LP
Sbjct: 268 FHLHNPFGTCDNDKKLEIVVERLDSDNSNNVKELVLSSEDSECCICLSNYDDGAELYALP 327

Query: 319 CNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           CNHHFH  CI KWL+INATCPLCKF+I + D+LV
Sbjct: 328 CNHHFHCGCISKWLQINATCPLCKFNIMRADTLV 355

The following BLAST results are available for this feature:

BLAST of Csa4G418580.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RING4_ARATH	5.9e-66	44.52	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 ...	[more]
RING1_ARATH	1.3e-65	41.94	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 ...	[more]
RING2_ARATH	6.6e-65	38.83	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 ...	[more]
RIE1_ARATH	2.3e-62	41.36	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1	[more]
RF12B_XENLA	7.9e-10	32.73	E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b PE=2 SV=1	[more]

BLAST of Csa4G418580.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYD1_CUCSA	9.1e-207	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G418580 PE=4 SV=1	[more]
A0A0A0LEQ8_CUCSA	3.4e-92	51.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816170 PE=4 SV=1	[more]
F6HQS8_VITVI	2.8e-86	48.52	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00310 PE=4 SV=...	[more]
V7CXA2_PHAVU	1.8e-82	49.03	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G116400g PE=4 SV=1	[more]
A0A0S3RWX1_PHAAN	2.0e-81	49.03	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G255800 PE=...	[more]

BLAST of Csa4G418580.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68070.1	3.2e-70	43.86	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT4G11680.1	3.3e-67	44.52	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G12760.1	7.4e-67	41.94	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G63170.1	3.7e-66	38.83	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT2G01735.1	1.3e-63	41.36	RING-finger protein for embryogenesis	[more]

BLAST of Csa4G418580.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453127\|ref\|XP_004144310.1\|	1.3e-206	100.00	PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus]	[more]
gi\|659111585\|ref\|XP_008455807.1\|	1.8e-107	97.96	PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Cucumis melo]	[more]
gi\|659085035\|ref\|XP_008443208.1\|	3.7e-92	50.87	PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo]	[more]
gi\|449437970\|ref\|XP_004136763.1\|	4.8e-92	51.45	PREDICTED: E3 ubiquitin-protein ligase At1g12760 [Cucumis sativus]	[more]
gi\|1009141888\|ref\|XP_015888427.1\|	1.7e-89	49.40	PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G418580	Csa4G418580	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa4G418580.1	Csa4G418580.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa4G418580.1.utr3p1	Csa4G418580.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa4G418580.1.cds4	Csa4G418580.1.cds4	CDS
Csa4G418580.1.cds3	Csa4G418580.1.cds3	CDS
Csa4G418580.1.cds2	Csa4G418580.1.cds2	CDS
Csa4G418580.1.cds1	Csa4G418580.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa4G418580.1.utr5p1	Csa4G418580.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 295..337 score: 4.2
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 296..336 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 296..337 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 292..339 score: 5.8
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 6..257 score: 7.2E-108coord: 285..340 score: 7.2E
None	No IPR available	PANTHER	PTHR14155:SF114	SUBFAMILY NOT NAMED	coord: 285..340 score: 7.2E-108coord: 6..257 score: 7.2E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 282..341 score: 6.56