Csa4G290750.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGGAAATACAAAGCACTTATTACTGGCACACCTTTTTGACAAACCGTGCTTTCTAGGCCTTCTTGCCGTACAGGTAACTGTTTCTTGCTCAATCCGGAGTTGTACAGTAGAATTAGTGTTTTATTGAACATTCACTGCCAAATATGAGGGAAAGAATGAAGTGTTGTGCAATCACTCTTTTATCATTTTATTAGAAATGACAATTTTTTATACTCCTTACATTTGAGAACGAGAGCTTTAAAACAAGATGGAAACCGTTGGAATTAAGTTTGCTTGTTTATAAAACTAAACAAAAACTTTATATCACAAGTTTGATTTTGCTGGGATAGTAATATCTCGAGGATTCTCTCCTTTGGTTATAGGCAGAAGACATTTCAGGTTTCCATGTTAATACACATATCCCAATTGTTGTTGGATCTCAAATGCGGTATGAAGTCACCGGTGATCCACTGTATAAGGTAAATCTCTTCGCATTTGTCTGAATTTTTTTAATAATAACAATAATAAATTTTAACAATTAATTAATTCATTAAAATTTTTAATGTTCAAACACTTCTCTATATTCTTGCTTGCTTAGCATAGAGTTTCTAATGATGTAATCAGAGATTTCTTCATTCATTCATCCTTCGTGAGAAGGGATGCCTCTTATGGATTGTTGGGGTGTGTGTTGTTCTTTAGGTTATGAGGGGGACAGAATAATAGAGATTGTTTACGGGTTCTTAGTGGGGATCTTTTGAGGTTTGGTGTGTTGTTACATATCATGTTTCCATTTGGGCTTTGGTTTTGAAGACTTTTTCTGACCACTCTTTATGCGCTATTTTGTATAGTTGTGGTCTCTTCTTTTAGAGGGAAATCCTTTCTTTTTTTAGTGGCTTTTGGTTTTTGCCTCCGTATTTTTTAATTATTATCTCAATGAAAGTTGTTTCTATAAAAATAAATATTAGTTATGAAGACAATGCAGTATTAGTTATGAACAATATATTTTTTGATTTCTTCCTAAGTTTGCTTGAAGCTTTCTTTTCTTTCTTTTTCCCTAAACCTTTCATTGAGTCTGTCAATGTTTAGTTGAATTCTAATTTCTAATCTGGTTTGTGATTGAATGACAGGTTCGACTTAGAAAGCTATTTTTATTGAGCTATTTGAAATTCTTTATTCCAGGAAATATCCACATATTTTATGGACATTGTTAACTCCTCCCACAGCTATGCAACAGGAGGGACATCAGTGCATGAGTTCTGGTATGGACACTGGAGTCTTCTATTTAAAATTATGTGCGCTATGTATTGTAGGACTTCATGTACATCCTTATGTATAGTACTCAGTCTCATTTTCTGTTTCTTTATTTGATTGTTTTTATATATATTAATGCAGACATATAATCCATGTATATACAGCCTTTGTGCCCGTTTTTCGAAAATGCTTGTCTTGTGTTTGAAATCTTCCATCCTCCTTAACCATGGTGTTATACAATTAAAAAGTGAGCATTAGGCTCCAATTAGTTAGTTACTTATTTTGTGCTTCATCTTGTATGAAAATTATATGACTTTGTATTTTATTGCTGTTTCTATTCTGACATTTCCTTCTTCAAAGTTGGCTTCTGCATCTTTTTAATTTCCATACACTTTTTAACATCACAGTCTTTCCTCCTTTGACCTATGAGCAGGAGAGATCCCAAGAGATTGGCAGATGCTCTAGGAACGGAAACTGAAGAGTCATGTACAACTTACAACATGCTTAAGGTATTACACTTTCCTTTGGCTATAATTTTTGCAGATTATTTGAATTCTCAGCTAGCCTCCTTTGGAAATAAAGGACCCCTATTATTTTGCTTTCTTCTGGGAAAAAAAAAAGATATACTTTGAACTAGTAATTTAATAGAAGCCAACTTTTGATATATATAAAAAATAAAAGGAATTACAATTTACTCCCCAAGTATAATGGGGTGCTTTGATCCTCCCCTCTTGAGATATCTCTCAACCCCTAATTCACTATCATAATGCCTACCCTCATCATTTCCCACCCCCAAAATTTATAACCAAATACCATTACACACTCCCCATCTGTTTCATATTAAAATAACACACTCCCTATCTAAGTACTTATATACCCTAACACTTTAATAATATTTCTAATAGTAATTCTACAAGTAATTGTGTAATATGCTGAAAATCTTTCCGCCATCTCTTCTTCCTTTTGCACTTTGTCAACAGTTTATGTAGAATTTGATGCATCGTCCTGATGGGGTGAGGGTTATATTATACACTTCATGTTGATTCTGTATAAGCATTTTTAGATGAACACACTTTTCTCGCAATATTTTTACTCTAGTTGATGATATTATAGGTCTCTCGCAACTTGTTCAAATGGACCAAGGAAATAGCATACGCCGATTACTATGAGCGGGCTCTTACAAATGGGGTGCTGAGCATCCAAAGAGGAACTGACCCTGGGGTAATGATTTACATGCTTCCATTAGGTAGTGGAAGTTCTAAAGCCATAAGCTACCATGGATGGGGGACCCCATTTGAATCTTTTTGGTGTTGCTATGGCACAGGTTTGACTTCATTATGCTCAGACATTCCTTTTGTTTTAGTCTCTGCGATTACTTAAAAATTATCAGTTATATTCGCATAATCTTGTCTGTATATGAATGAAGATGTTGTCCGTAGAGGTTTCTGTCGCTTGTTCTCATTCAATTGTTTCATTTCTTGCTCTTAATTTAGGAATTGAATCATTCTCCAAGTTGGGAGATTCCATATACTTTGAGGAGGAACTACAAACCCCCACGCTTTATGTTATCCAGTATATATCAAGTTCTCTTGATTGGAAATCAGGAAATGTTTTGCTAAATCAGACAGTTGATCCTATTCATTCAGAGGATCCAAAACTCAGGATGACATTGACATTTTCTCCCAAGGTGGTATACTTTTTACATTTCTCATGACGCAAATACTTTTATGGCTTTCTGATATAAAGTTTTGTCCATGCACATCATCAGATTATCTTATTATGACTTCAAACTTTCAAAGAGACAAACCATTGAATAGTATGTGCACTTATTTACATATGTGAGTGTCCTGGCCAATTTATGCATTTGATCAACTATATTTTCACAACGTAGGTATCCATCTCTCTAAGCCCTTTATTTTTTTCATGGTTCTTATTCAGCCGGGGGTTTACACATGGTGGTTTTACATAATATAGTGTTATATATGGCATTGGGTTATAAAAGATTTAACAAAACTTCTACGAAGCTAGGAGTGAATTTAACGTGGAAACAACCAGATGCGTTAAGTAACACTGAAACTAGCCATTTCCTGATATTTCTAGTCGTATTTCACTGAAGAGGAGAATCAAATCAATGGGCTCAGGCTTAGCCAAGATAGACCGGTGGACCTTGGATTGTATATGATTAGAATAGCTAGGAGAAGTTGTTCATAAGTAGAAAAGATTGGTGTAAAGTTGCATTATTGTTCAACGTATTTGCACGGTTCAGATGCAGGATTAAAATTTTACCCTGTGAAGATGAAACTGACTAGAAATCTTGAAAATTCTAAAATGAAGATTCAGTGAGTTCGTGGACAGGGATAAAAGATTTAGATTTCCATCTTTGCTTGATCCCAAGCTGAGCAGTGAAAACACAATTGTTTTAAAATCTTTGGTTACTAACTCTGCAAGTCATCTGTTTGTATTATGTAAAATGCCAGAGATTGTCTGAATCTTTCGAGGAAACTTTCAAACCCAATATGTTTTCGATTTCTCTGCCTGTTGAGTAGTGGTTTCGTTTCCATGGGGAACTAACTAATTTCCGTTTGACCTGAATTATGCAGGGATCAGTACATTCGTCTACCATTAATTTGCGAATTCCAAGTTGGACAAGTGCGAGTGGCGCAAAAGTTGTACTAAATGGTCAGAGTTTGGGAAACAACATTAATGGTATATACCGCCATAACCCTCTGCTGGTTTCTCTTTATAGTAGAGCAGGAGAAAGCACTATTTGACTCGAGTTTCAAGTTCGTCTGAATACATCTTGCATCTTATTCTGGCTCTTATATATTCTTGAACTACAGTACCTCCTGTTCAGTCTAGTTTCCATTGGACTTTCACCAGACGCTTTTACATGGCATCATTCCGGTGAAATTTTATGTTTCTTACTCCTGTTTTCTTATGTTGCAGGTAACTTCAAATCGGTTACTAACTCATGGAGCTCAGGGAACAAGTTAAGCCTTGAGCTACCCATTAACCTAAGAACTGAAGCTATTGATGGTATATTATCTATCCAATCTGATATAGATGTTTCATTACAATGTTTAGATAATCAATCACTCTTGCGTGAATATACTCAGATGATCGATCTGAATATGCTTCCGTCAAAGCAATCCTGTTTGGCCCCTATCTGCTGGCAGCCTATAGTAATGGTGACTGGGAAATCAAAACCCAACAGGCCGATTCTTTATCAGACTGGATAACTCATGTTCCTTCCGCGTACAATACTTTTCTTGTTACTTTTTCCCAAGCATCTGGGAAGACATCTTTTGCCTTAACAAACTCAAACCAGTCAATAACAATGGAAAAATATCCTGGACAAGGGACGGATTCTGCTGTCCATGCTACATTCAGGCTCATCATAGATGACCCATCTGCCAAAGTCACAGAATTGCAAGATGTTATTGGCAAACGGGTCATGCTAGAACCATTTAGTTTTCCAGGGATGGTTCTAGGAAATAAAGGAAAAGACGAGAGACTTGAAATTGCTGATGCAAACTCGGAGGGGCACTCCTCTGATTTCTATCTAGTTGAGGGATTAGATGGAAAGAATGGAACGGTATCGTTGGCATCCATAGATAATGAAGGCTGCTTTGTTTACAGTGGAGTGAACTATGAATCTGGTGCACAGTTAAAGCTAAGCTGCAAGTCAAAGCTGTCATTAGATGATGGATTCGATGAAGCGTCCAGTTTTTTGCTGGAAAGTGGAGCAAGTCAGTATCATCCAATAAGCTTTGTTACAAAAGGAATGACAAGGAACTTTCTTCTGGCACCATTGCTGAGTTTCGTAGATGAATCTTATACAGTTTACTTCAACTTTAATGCTTAGCCATGTAGGTTGAAAGATTGAAATAGTCATCAGCAGAGTTATCATTAGCTTTTTACGTTTACAATTAGTGGTAGGGTAAGTAATAACTACAAATAACACAATATAGATGATTCAGTGATCCTCTTTTCCTTTTTCATCAGTTTCTCATTCGCTTTCAAAGCAATGCACGTAAGTCGATCCAGATACTCACCGGTTAAGAAAAAGAAAGATGTTTATAGCTTGAATTGTATTATTAGTGCTTGATGCAATGTACCCAAGTTGTTGTGACTGTATTAGATACTCATTTCATTAATATATATAGCAGTGTAATGAATAAAAGTCTTTAGCATGGGGACAGCAGCAATGAAAGAGAGTTAAAAAAAATGGTGGAT ATGCAGGGAAATACAAAGCACTTATTACTGGCACACCTTTTTGACAAACCGTGCTTTCTAGGCCTTCTTGCCGTACAGGCAGAAGACATTTCAGGTTTCCATGTTAATACACATATCCCAATTGTTGTTGGATCTCAAATGCGGTATGAAGTCACCGGTGATCCACTGTATAAGGAAATATCCACATATTTTATGGACATTGTTAACTCCTCCCACAGCTATGCAACAGGAGGGACATCAGTGCATGAGTTCTGGAGAGATCCCAAGAGATTGGCAGATGCTCTAGGAACGGAAACTGAAGAGTCATGTACAACTTACAACATGCTTAAGGTCTCTCGCAACTTGTTCAAATGGACCAAGGAAATAGCATACGCCGATTACTATGAGCGGGCTCTTACAAATGGGGTGCTGAGCATCCAAAGAGGAACTGACCCTGGGGTAATGATTTACATGCTTCCATTAGGTAGTGGAAGTTCTAAAGCCATAAGCTACCATGGATGGGGGACCCCATTTGAATCTTTTTGGTGTTGCTATGGCACAGGAATTGAATCATTCTCCAAGTTGGGAGATTCCATATACTTTGAGGAGGAACTACAAACCCCCACGCTTTATGTTATCCAGTATATATCAAGTTCTCTTGATTGGAAATCAGGAAATGTTTTGCTAAATCAGACAGTTGATCCTATTCATTCAGAGGATCCAAAACTCAGGATGACATTGACATTTTCTCCCAAGGGATCAGTACATTCGTCTACCATTAATTTGCGAATTCCAAGTTGGACAAGTGCGAGTGGCGCAAAAGTTGTACTAAATGGTCAGAGTTTGGGAAACAACATTAATGGTAACTTCAAATCGGTTACTAACTCATGGAGCTCAGGGAACAAGTTAAGCCTTGAGCTACCCATTAACCTAAGAACTGAAGCTATTGATGATGATCGATCTGAATATGCTTCCGTCAAAGCAATCCTGTTTGGCCCCTATCTGCTGGCAGCCTATAGTAATGGTGACTGGGAAATCAAAACCCAACAGGCCGATTCTTTATCAGACTGGATAACTCATGTTCCTTCCGCGTACAATACTTTTCTTGTTACTTTTTCCCAAGCATCTGGGAAGACATCTTTTGCCTTAACAAACTCAAACCAGTCAATAACAATGGAAAAATATCCTGGACAAGGGACGGATTCTGCTGTCCATGCTACATTCAGGCTCATCATAGATGACCCATCTGCCAAAGTCACAGAATTGCAAGATGTTATTGGCAAACGGGTCATGCTAGAACCATTTAGTTTTCCAGGGATGGTTCTAGGAAATAAAGGAAAAGACGAGAGACTTGAAATTGCTGATGCAAACTCGGAGGGGCACTCCTCTGATTTCTATCTAGTTGAGGGATTAGATGGAAAGAATGGAACGGTATCGTTGGCATCCATAGATAATGAAGGCTGCTTTGTTTACAGTGGAGTGAACTATGAATCTGGTGCACAGTTAAAGCTAAGCTGCAAGTCAAAGCTGTCATTAGATGATGGATTCGATGAAGCGTCCAGTTTTTTGCTGGAAAGTGGAGCAAGTCAGTATCATCCAATAAGCTTTGTTACAAAAGGAATGACAAGGAACTTTCTTCTGGCACCATTGCTGAGTTTCGTAGATGAATCTTATACAGTTTACTTCAACTTTAATGCTTAG ATGCAGGGAAATACAAAGCACTTATTACTGGCACACCTTTTTGACAAACCGTGCTTTCTAGGCCTTCTTGCCGTACAGGCAGAAGACATTTCAGGTTTCCATGTTAATACACATATCCCAATTGTTGTTGGATCTCAAATGCGGTATGAAGTCACCGGTGATCCACTGTATAAGGAAATATCCACATATTTTATGGACATTGTTAACTCCTCCCACAGCTATGCAACAGGAGGGACATCAGTGCATGAGTTCTGGAGAGATCCCAAGAGATTGGCAGATGCTCTAGGAACGGAAACTGAAGAGTCATGTACAACTTACAACATGCTTAAGGTCTCTCGCAACTTGTTCAAATGGACCAAGGAAATAGCATACGCCGATTACTATGAGCGGGCTCTTACAAATGGGGTGCTGAGCATCCAAAGAGGAACTGACCCTGGGGTAATGATTTACATGCTTCCATTAGGTAGTGGAAGTTCTAAAGCCATAAGCTACCATGGATGGGGGACCCCATTTGAATCTTTTTGGTGTTGCTATGGCACAGGAATTGAATCATTCTCCAAGTTGGGAGATTCCATATACTTTGAGGAGGAACTACAAACCCCCACGCTTTATGTTATCCAGTATATATCAAGTTCTCTTGATTGGAAATCAGGAAATGTTTTGCTAAATCAGACAGTTGATCCTATTCATTCAGAGGATCCAAAACTCAGGATGACATTGACATTTTCTCCCAAGGGATCAGTACATTCGTCTACCATTAATTTGCGAATTCCAAGTTGGACAAGTGCGAGTGGCGCAAAAGTTGTACTAAATGGTCAGAGTTTGGGAAACAACATTAATGGTAACTTCAAATCGGTTACTAACTCATGGAGCTCAGGGAACAAGTTAAGCCTTGAGCTACCCATTAACCTAAGAACTGAAGCTATTGATGATGATCGATCTGAATATGCTTCCGTCAAAGCAATCCTGTTTGGCCCCTATCTGCTGGCAGCCTATAGTAATGGTGACTGGGAAATCAAAACCCAACAGGCCGATTCTTTATCAGACTGGATAACTCATGTTCCTTCCGCGTACAATACTTTTCTTGTTACTTTTTCCCAAGCATCTGGGAAGACATCTTTTGCCTTAACAAACTCAAACCAGTCAATAACAATGGAAAAATATCCTGGACAAGGGACGGATTCTGCTGTCCATGCTACATTCAGGCTCATCATAGATGACCCATCTGCCAAAGTCACAGAATTGCAAGATGTTATTGGCAAACGGGTCATGCTAGAACCATTTAGTTTTCCAGGGATGGTTCTAGGAAATAAAGGAAAAGACGAGAGACTTGAAATTGCTGATGCAAACTCGGAGGGGCACTCCTCTGATTTCTATCTAGTTGAGGGATTAGATGGAAAGAATGGAACGGTATCGTTGGCATCCATAGATAATGAAGGCTGCTTTGTTTACAGTGGAGTGAACTATGAATCTGGTGCACAGTTAAAGCTAAGCTGCAAGTCAAAGCTGTCATTAGATGATGGATTCGATGAAGCGTCCAGTTTTTTGCTGGAAAGTGGAGCAAGTCAGTATCATCCAATAAGCTTTGTTACAAAAGGAATGACAAGGAACTTTCTTCTGGCACCATTGCTGAGTTTCGTAGATGAATCTTATACAGTTTACTTCAACTTTAATGCTTAG MQGNTKHLLLAHLFDKPCFLGLLAVQAEDISGFHVNTHIPIVVGSQMRYEVTGDPLYKEISTYFMDIVNSSHSYATGGTSVHEFWRDPKRLADALGTETEESCTTYNMLKVSRNLFKWTKEIAYADYYERALTNGVLSIQRGTDPGVMIYMLPLGSGSSKAISYHGWGTPFESFWCCYGTGIESFSKLGDSIYFEEELQTPTLYVIQYISSSLDWKSGNVLLNQTVDPIHSEDPKLRMTLTFSPKGSVHSSTINLRIPSWTSASGAKVVLNGQSLGNNINGNFKSVTNSWSSGNKLSLELPINLRTEAIDDDRSEYASVKAILFGPYLLAAYSNGDWEIKTQQADSLSDWITHVPSAYNTFLVTFSQASGKTSFALTNSNQSITMEKYPGQGTDSAVHATFRLIIDDPSAKVTELQDVIGKRVMLEPFSFPGMVLGNKGKDERLEIADANSEGHSSDFYLVEGLDGKNGTVSLASIDNEGCFVYSGVNYESGAQLKLSCKSKLSLDDGFDEASSFLLESGASQYHPISFVTKGMTRNFLLAPLLSFVDESYTVYFNFNA*
BLAST of Csa4G290750.1 vs. TrEMBL
Match: A0A067FFC7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002978mg PE=4 SV=1) HSP 1 Score: 805.8 bits (2080), Expect = 3.3e-230 Identity = 395/553 (71.43%), Postives = 461/553 (83.36%), Query Frame = 1
BLAST of Csa4G290750.1 vs. TrEMBL
Match: A0A067FBQ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002978mg PE=4 SV=1) HSP 1 Score: 805.8 bits (2080), Expect = 3.3e-230 Identity = 395/553 (71.43%), Postives = 461/553 (83.36%), Query Frame = 1
BLAST of Csa4G290750.1 vs. TrEMBL
Match: V4UAN4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014240mg PE=4 SV=1) HSP 1 Score: 804.3 bits (2076), Expect = 9.5e-230 Identity = 394/553 (71.25%), Postives = 461/553 (83.36%), Query Frame = 1
BLAST of Csa4G290750.1 vs. TrEMBL
Match: A0A0B0PIQ9_GOSAR (Proline--tRNA ligase OS=Gossypium arboreum GN=F383_05332 PE=4 SV=1) HSP 1 Score: 771.9 bits (1992), Expect = 5.2e-220 Identity = 376/556 (67.63%), Postives = 443/556 (79.68%), Query Frame = 1
BLAST of Csa4G290750.1 vs. TrEMBL
Match: A0A061GST6_THECC (Glycosyl hydrolase of Uncharacterized protein function (DUF1680), putative isoform 1 OS=Theobroma cacao GN=TCM_040567 PE=4 SV=1) HSP 1 Score: 769.6 bits (1986), Expect = 2.6e-219 Identity = 380/555 (68.47%), Postives = 447/555 (80.54%), Query Frame = 1
BLAST of Csa4G290750.1 vs. TAIR10
Match: AT5G12950.1 (AT5G12950.1 Putative glycosyl hydrolase of unknown function (DUF1680)) HSP 1 Score: 688.3 bits (1775), Expect = 3.8e-198 Identity = 339/557 (60.86%), Postives = 423/557 (75.94%), Query Frame = 1
BLAST of Csa4G290750.1 vs. TAIR10
Match: AT5G12960.1 (AT5G12960.1 Putative glycosyl hydrolase of unknown function (DUF1680)) HSP 1 Score: 686.0 bits (1769), Expect = 1.9e-197 Identity = 339/559 (60.64%), Postives = 422/559 (75.49%), Query Frame = 1
BLAST of Csa4G290750.1 vs. NCBI nr
Match: gi|700199001|gb|KGN54159.1| (hypothetical protein Csa_4G290750 [Cucumis sativus]) HSP 1 Score: 1129.8 bits (2921), Expect = 0.0e+00 Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 1
BLAST of Csa4G290750.1 vs. NCBI nr
Match: gi|778693146|ref|XP_011653585.1| (PREDICTED: uncharacterized protein LOC101207833 [Cucumis sativus]) HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00 Identity = 557/557 (100.00%), Postives = 557/557 (100.00%), Query Frame = 1
BLAST of Csa4G290750.1 vs. NCBI nr
Match: gi|659097647|ref|XP_008449737.1| (PREDICTED: uncharacterized protein LOC103491528 [Cucumis melo]) HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00 Identity = 530/557 (95.15%), Postives = 547/557 (98.20%), Query Frame = 1
BLAST of Csa4G290750.1 vs. NCBI nr
Match: gi|641845944|gb|KDO64829.1| (hypothetical protein CISIN_1g002978mg [Citrus sinensis]) HSP 1 Score: 805.8 bits (2080), Expect = 4.7e-230 Identity = 395/553 (71.43%), Postives = 461/553 (83.36%), Query Frame = 1
BLAST of Csa4G290750.1 vs. NCBI nr
Match: gi|568825675|ref|XP_006467203.1| (PREDICTED: uncharacterized protein LOC102617902 [Citrus sinensis]) HSP 1 Score: 805.8 bits (2080), Expect = 4.7e-230 Identity = 395/553 (71.43%), Postives = 461/553 (83.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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