Csa4G124910.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G124910.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Hd1; contains IPR000315 (Zinc finger, B-box), IPR010402 (CCT domain)
Location	Chr4 : 7612845 .. 7615887 (-)
Sequence length	1035

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGACAGAAGACGAGTACCGTGGGAGTGGCGGCAATGGATGGGGCGCCGTAATTTGCGAGGCATGTGAGAGATGTCCAGCAGAATTCATCTGCAAAGCAGACGCGGCATCACTATGTGCGGCGTGCGATGCAGAGATCCACTCGGCAAACCCCTTGGCTCGACGGCACCAACGGGTGCCGATCAGCAGGGGTGGAGCCATGTTTCGTAGCGTAGAAGAGGAAGATGAGGAAGAGGCGGCTTCTTGGTTGCTGATGAATCCAGGAAAGAACAACGACAACAAAAACAATAACAACAACAATAACAATGGAATGTTTTTGTTGAGTGGGGAAGATGAAGAGGATGATGAGTATTTGAAATTTGTGGAGTTCAATGGGAATAATGAAGAAGATGATGATGAATTTGAAACATTGAAGAACAACAATTATGGTGGAGGAGGAGACAGTGTTGTGCCTATCGATCAATTTGAAGGGAATAAGAATCACGATCATCATCTTCATCATCATCATCACGAACAGCAACAACAAAATCATGAGATATTGTTGGAGCAAAGCTATGGAGGGCTTGTTGATGCTTCTGAATTCTTTCACACTTCTTCAAAACCTTCTTTCTCCTACAATGGCTTCCTCACCCATGCTGTAAACACTCTTCCTCCTTAACTCTCTCATTATTCTTTTGTTTCTAAATTTAGTTTTAAAATATAAGGTTGGGAATTTTCTATGTTTGATCATTTGTTTTGAACTATTTGGAAAAATTTTCTTTTAATTTGGTTTCTTTTGAATATGCAAAAGGCTTAGATTCTAAATTCTTATTTGGTTTGGTTCTATAATCTTTTAAAATTTTCAATTTTTACTTTTTATTCTAGTTTTTTTTTTTTTTTCTTTTTGGTAAGAAAAGTTCAGTACCCATCAACAGTTTCTTTTCTTTTTGGTAAATAATATATTACGAGTGGAGATAATTAGTGTTTATAGTAAGCAATACAAGCATTAAAAATAAAAAAACTAAAATTTAAGATTTTTTGTAATATAAACAAGTACAAAAGTATATAAGTGTCTATTCTATATATAATATAAAATTTTGCTATATTTATAATTTTTTTTAATCGTTTTAGTGTTTGCACTAGTTTGTTTTAGTTAAAATAAAATTTATAGTTTTCAAATTTTTATTTAACTTTTCCAAATCCAGAAATTGAGAGCTCCAATCAAATTCTCGTATCCTTATTTAAAAAAAAAAAAACAGATTATTACCAAAATAGTTATCCAACTAAATCTAACAATTTTGTTTTTGTTTTTCATTTTGGTAAAAAATTCAACTACTTCTACTGAATTTTCTAACAACCCAAGAATGAAATGATTTGGCCACGTATGAAGTACATAATCATTCTTATTTTATGATTTCTTTTTCAACTTAAGCATATTAAATGAGACTTAAAAAACTTTGAGATAATTAATTGAAACTATTTTGCTATATTTTCTTTTAAGGTTAATATACAAATATAAAACGAAAGTCGGACAATTCAAGATTTGTTTTTGAATATTGAAAACGATTCTTAACTTTTCTTTTTTTTTTTCGATTTGTTTAATATCAATTCTTGTATTTAAATCTTTCATTATTTTATCTTTATCATTTTCGACAAAATGTTTTGAAGTTATTTCACGATTGTTTCAATATTCTTTTTCATCTTATACATATTCGAGAATATTAAGATTATTGAAATTTTGTTTTAAACTATCAACAAGAATGTTAGATTTAAAGTTTTTTCACAAATGATCGTTTACATTAGACTACACAATCTCTTACCATAACCAATACGATCGTTTACCATGGTATGATTGTTAGATTTAAAGTTTTTAACGATCATATATCATGAACTACACGATCATTTACCATAATCAACATGATCATTTATCACTATCGTTTACCATGGTTAATACGATTTGTAAAGTATTTTATTTCACTACAAGATTATAAACGATCGTGTAGTTATGGTAAACGATCATGTATATGGATCTGATGATTGTTTAGATTATTTTATAAGATCGTTTATGTCTGAAGCTTTTTTGCCATCTATTCTGATTGTTTAAATTAAATTTTTTTCCATCATTTAAAATGAACTACACGATCATGTATTATGATCTAGATGATCATAGATCATTCATTTAGATTATAGTACATGATCGTCTAGAAGAAAATTACTCGCACGCCTGTGGTCGATTAATTGTATATTGACTAGGGTAGTTTTGGTCGTTTTCATGTTATCAAAATTGTTCTTCTAAAGGGTGTAAATATTTTACAAATTTGTTTTATTTTTGAAAAAACACCATTTTAAAAAATAGTTTCAATTTTTCTTATCCATAAAAAATTCTCTAATTTTTTAAAATTAGATTAAGTAAAATTGAGTTATGAAATTTGCACAAAAGGTTGAAATTATTTGTTTTTGTTGTAAATATAAGATATCGGTCTCCTCGATGGAGGTGGGAGTGGTACCGGAATCAACAGCAACAATAATGAGCGACATATCAATCTCCAACATGAGGCCACCAAAAGGAACAATCGATCTCTTCTCCGGCATGATAGCGGCGGAGCCGGCGGCGGCGAGTCAAATGCCGGCGGCCCAACTGAGTCCAATGGACAGAGAAGCCCGAGTTCTAAGGTACAGAGAGAAGAAAAAGACAAGAAAGTTCGAGAAGACCATCAGATACGCCTCAAGAAAGGCCTACGCCGAGACCCGGCCCAGAATCAAGGGCCGGTTCGCTAAGAGAACTGATGTTGAGGTCCAATTGGACAGGAAATACTCCAACCCCTTGATGCCGGATGCTGGGTATGGGATTGTGCCTTCCTTTTGAAGAAGATATGGACTAGAAACTATGAATTTTTTTACTTCTTCTAATTAATAATAAATACTACTAATTATAGGTGCATTTTAATATAACTTTTTTTTTTAAAATTATTATAGCATTTGTCTTAAGTGTATATGAATTTTGTATTCTCTGTAATTAATTACCTTTCACAATTCAAATATATTGTTTTTTTTGTTGT

mRNA sequence

ATGTTGAAGACAGAAGACGAGTACCGTGGGAGTGGCGGCAATGGATGGGGCGCCGTAATTTGCGAGGCATGTGAGAGATGTCCAGCAGAATTCATCTGCAAAGCAGACGCGGCATCACTATGTGCGGCGTGCGATGCAGAGATCCACTCGGCAAACCCCTTGGCTCGACGGCACCAACGGGTGCCGATCAGCAGGGGTGGAGCCATGTTTCGTAGCGTAGAAGAGGAAGATGAGGAAGAGGCGGCTTCTTGGTTGCTGATGAATCCAGGAAAGAACAACGACAACAAAAACAATAACAACAACAATAACAATGGAATGTTTTTGTTGAGTGGGGAAGATGAAGAGGATGATGAGTATTTGAAATTTGTGGAGTTCAATGGGAATAATGAAGAAGATGATGATGAATTTGAAACATTGAAGAACAACAATTATGGTGGAGGAGGAGACAGTGTTGTGCCTATCGATCAATTTGAAGGGAATAAGAATCACGATCATCATCTTCATCATCATCATCACGAACAGCAACAACAAAATCATGAGATATTGTTGGAGCAAAGCTATGGAGGGCTTGTTGATGCTTCTGAATTCTTTCACACTTCTTCAAAACCTTCTTTCTCCTACAATGGCTTCCTCACCCATGCTATATCGGTCTCCTCGATGGAGGTGGGAGTGGTACCGGAATCAACAGCAACAATAATGAGCGACATATCAATCTCCAACATGAGGCCACCAAAAGGAACAATCGATCTCTTCTCCGGCATGATAGCGGCGGAGCCGGCGGCGGCGAGTCAAATGCCGGCGGCCCAACTGAGTCCAATGGACAGAGAAGCCCGAGTTCTAAGGTACAGAGAGAAGAAAAAGACAAGAAAGTTCGAGAAGACCATCAGATACGCCTCAAGAAAGGCCTACGCCGAGACCCGGCCCAGAATCAAGGGCCGGTTCGCTAAGAGAACTGATGTTGAGGTCCAATTGGACAGGAAATACTCCAACCCCTTGATGCCGGATGCTGGGTATGGGATTGTGCCTTCCTTTTGA

Coding sequence (CDS)

ATGTTGAAGACAGAAGACGAGTACCGTGGGAGTGGCGGCAATGGATGGGGCGCCGTAATTTGCGAGGCATGTGAGAGATGTCCAGCAGAATTCATCTGCAAAGCAGACGCGGCATCACTATGTGCGGCGTGCGATGCAGAGATCCACTCGGCAAACCCCTTGGCTCGACGGCACCAACGGGTGCCGATCAGCAGGGGTGGAGCCATGTTTCGTAGCGTAGAAGAGGAAGATGAGGAAGAGGCGGCTTCTTGGTTGCTGATGAATCCAGGAAAGAACAACGACAACAAAAACAATAACAACAACAATAACAATGGAATGTTTTTGTTGAGTGGGGAAGATGAAGAGGATGATGAGTATTTGAAATTTGTGGAGTTCAATGGGAATAATGAAGAAGATGATGATGAATTTGAAACATTGAAGAACAACAATTATGGTGGAGGAGGAGACAGTGTTGTGCCTATCGATCAATTTGAAGGGAATAAGAATCACGATCATCATCTTCATCATCATCATCACGAACAGCAACAACAAAATCATGAGATATTGTTGGAGCAAAGCTATGGAGGGCTTGTTGATGCTTCTGAATTCTTTCACACTTCTTCAAAACCTTCTTTCTCCTACAATGGCTTCCTCACCCATGCTATATCGGTCTCCTCGATGGAGGTGGGAGTGGTACCGGAATCAACAGCAACAATAATGAGCGACATATCAATCTCCAACATGAGGCCACCAAAAGGAACAATCGATCTCTTCTCCGGCATGATAGCGGCGGAGCCGGCGGCGGCGAGTCAAATGCCGGCGGCCCAACTGAGTCCAATGGACAGAGAAGCCCGAGTTCTAAGGTACAGAGAGAAGAAAAAGACAAGAAAGTTCGAGAAGACCATCAGATACGCCTCAAGAAAGGCCTACGCCGAGACCCGGCCCAGAATCAAGGGCCGGTTCGCTAAGAGAACTGATGTTGAGGTCCAATTGGACAGGAAATACTCCAACCCCTTGATGCCGGATGCTGGGTATGGGATTGTGCCTTCCTTTTGA

Protein sequence

MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF*

Homology

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BLAST of Csa4G124910.1 vs. Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 6.3e-68
Identity = 161/336 (47.92%), Postives = 198/336 (58.93%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI---------SRGGAMF 79
           +C++CE  PA F+CKADAASLC ACDAEIHSANPLARRHQRVPI         S   +  
Sbjct: 58  VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSET 117

Query: 80  RSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNGNNE 139
            +  +ED+ E ASWLL NPGKN  N+NN        FL   E      YL  V+++ +  
Sbjct: 118 DADNDEDDREVASWLLPNPGKNIGNQNNG-------FLFGVE------YLDLVDYSSSM- 177

Query: 140 EDDDEFETLKNNNY--GGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHEILLEQSYG 199
             D++FE  +  +Y    GGD VVP+   E            H +Q QQN ++ +     
Sbjct: 178 --DNQFEDNQYTHYQRSFGGDGVVPLQVEESTS---------HLQQSQQNFQLGINY--- 237

Query: 200 GLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISNMRPPKGTI 259
           G    + + + S K        L H+ SVSSM++ VVPESTA   SDI++ + R  K TI
Sbjct: 238 GFSSGAHYNNNSLKD-------LNHSASVSSMDISVVPESTA---SDITVQHPRTTKETI 297

Query: 260 DLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRP 319
           D  SG     P    Q    QL+PM+REARVLRYREKKKTRKF+KTIRYASRKAYAE RP
Sbjct: 298 DQLSG----PPTQVVQ----QLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRP 347

Query: 320 RIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           RIKGRFAKR + E + +  +S  LM + GYGIVPSF
Sbjct: 358 RIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347

HSP 2 Score: 185.3 bits (469), Expect = 1.2e-45
Identity = 133/366 (36.34%), Postives = 183/366 (50.00%), Query Frame = 1


Query: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
           MLK E     S  +G  A  C+ C        C+AD+A LC  CDA +H+AN +A RH+R
Sbjct: 1   MLKEE-----SNESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHER 60

Query: 61  VPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYL 120
           V + +      +      + A+     +   ++ N     +    +  LS         +
Sbjct: 61  VRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSS---M 120

Query: 121 KFVEFNGNNEEDDDEFETL-----------KNNNYGGGGDSVVPIDQFEGNKNHDHHLHH 180
              E + +N+EDD E  +            +NN +  G + +  +D      N      +
Sbjct: 121 APSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGVEYLDLVDYSSSMDNQFEDNQY 180

Query: 181 HHHEQQQQNHEIL---LEQSYGGLVDASEFFHTSSKPSFS----YNG----FLTHAISVS 240
            H+++      ++   +E+S   L  + + F       FS    YN      L H+ SVS
Sbjct: 181 THYQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASVS 240

Query: 241 SMEVGVVPESTATIMSDISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREAR 300
           SM++ VVPESTA   SDI++ + R  K TID  SG     P    Q    QL+PM+REAR
Sbjct: 241 SMDISVVPESTA---SDITVQHPRTTKETIDQLSG----PPTQVVQ----QLTPMEREAR 300

Query: 301 VLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGY 345
           VLRYREKKKTRKF+KTIRYASRKAYAE RPRIKGRFAKR + E + +  +S  LM + GY
Sbjct: 301 VLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGY 347

[Close]

BLAST of Csa4G124910.1 vs. Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.8e-59
Identity = 154/353 (43.63%), Postives = 201/353 (56.94%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI-SRGGAMFRSV----- 79
           +CE+CER PA F+C+AD ASLC ACD+E+HSANPLARRHQRVPI    G  F S+     
Sbjct: 62  VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHH 121

Query: 80  -EEEDEEEAASWLLMN--PGKNND-------------NKNNNNNNNNGMFLLSGEDEEDD 139
             E+   +    L+++   G+  D             +  NNNN NNG+          D
Sbjct: 122 QSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLF-------SD 181

Query: 140 EYLKFVEFNGNNE-EDDDEFETLKNN----NYGGGGDSVVPIDQFEGNKNHDHHLHHHHH 199
           EYL  V++N + + +   E+   + N        GGD VVP+ + E ++ H  H      
Sbjct: 182 EYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPL-KLEESRGHQCH------ 241

Query: 200 EQQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATI 259
              QQN +  ++  YG           SS   ++ NG + H   +SSME GVVPESTA +
Sbjct: 242 --NQQNFQFNIK--YG-----------SSGTHYNDNGSINHNAYISSMETGVVPESTACV 301

Query: 260 MSDISISNMRPPKGTIDLFSGMIAAEPAAASQM-PAAQLSPMDREARVLRYREKKKTRKF 319
               + S+ R PKGT++        +P  ASQM    QLSPMDREARVLRYREK+KTRKF
Sbjct: 302 ---TTASHPRTPKGTVE-------QQPDPASQMITVTQLSPMDREARVLRYREKRKTRKF 361

Query: 320 EKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           EKTIRYASRKAYAE RPR+ GRFAKR ++E + ++ ++  LM + GYGIVPSF
Sbjct: 362 EKTIRYASRKAYAEIRPRVNGRFAKR-EIEAE-EQGFNTMLMYNTGYGIVPSF 373

HSP 2 Score: 183.7 bits (465), Expect = 3.4e-45
Identity = 143/386 (37.05%), Postives = 194/386 (50.26%), Query Frame = 1


Query: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
           MLK E    GSG N   A  C+ C        C AD+A LC +CDA++HSAN +A RH+R
Sbjct: 1   MLKQESNDIGSGENN-RARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKR 60

Query: 61  VPI----SRGGAMFRSVEEE-------DEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLL 120
           V +     R  A F    ++       D E  ++  L    +       + N+ + M   
Sbjct: 61  VRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTT 120

Query: 121 SGEDEE---DDEYLKFVEFNGNNEEDDDEFETL--------KNNNYGGGG----DSVVPI 180
             + E+   D E    V+     E D D  E          KNNN    G    D  + +
Sbjct: 121 HHQSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLFSDEYLNL 180

Query: 181 DQFEGNKNHDHHLHHHHHEQQ----QQNH------EILLEQSYGGLVDASEFF-----HT 240
             +  + ++     +  H+Q     Q ++       + LE+S G      + F     + 
Sbjct: 181 VDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLKLEESRGHQCHNQQNFQFNIKYG 240

Query: 241 SSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISNMRPPKGTIDLFSGMIAAEP 300
           SS   ++ NG + H   +SSME GVVPESTA +    + S+ R PKGT++        +P
Sbjct: 241 SSGTHYNDNGSINHNAYISSMETGVVPESTACV---TTASHPRTPKGTVE-------QQP 300

Query: 301 AAASQM-PAAQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 345
             ASQM    QLSPMDREARVLRYREK+KTRKFEKTIRYASRKAYAE RPR+ GRFAKR 
Sbjct: 301 DPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR- 360

[Close]

BLAST of Csa4G124910.1 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.8e-57
Identity = 145/348 (41.67%), Postives = 191/348 (54.89%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI------SRGGAMFRSV 79
           +C++CER PA F CKADAASLC  CD+EIHSANPLARRHQRVPI      S         
Sbjct: 54  VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHS 113

Query: 80  EEEDEEEAASWLLMNPGKNNDNK---------NNNNN--NNNGMFLLSGEDEEDDEYLKF 139
            E    +  + L++   + ++++         N+  N  NNNG  +        DE+L  
Sbjct: 114 CETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSI-------GDEFLNL 173

Query: 140 VEFNGNNEEDDDEFE------TLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQ 199
           V+++ ++++  D+         +   +Y  G D VVP+ Q E +K            Q+Q
Sbjct: 174 VDYSSSDKQFTDQSNQYQLDCNVPQRSY--GEDGVVPL-QIEVSKG---------MYQEQ 233

Query: 200 QNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDI 259
           QN ++ +     G + +S             NG L+H ++VSSM++GVVPEST    SD 
Sbjct: 234 QNFQLSINCGSWGALRSS-------------NGSLSHMVNVSSMDLGVVPESTT---SDA 293

Query: 260 SISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIR 319
           ++SN R PK   D                PA  LSP DREARVLRYREKKK RKFEKTIR
Sbjct: 294 TVSNPRSPKAVTD-----------QPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIR 353

Query: 320 YASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           YASRKAYAE RPRIKGRFAK+ DV+ + ++ +S  +  D GYGIVPSF
Sbjct: 354 YASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

HSP 2 Score: 54.3 bits (129), Expect = 3.1e-06
Identity = 25/63 (39.68%), Postives = 34/63 (53.97%), Query Frame = 1


Query: 1  MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
          MLK E  +         A  C+ C        C+AD+A LC++CDA++H+AN LA RH+R
Sbjct: 1  MLKVESNW---------AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHER 54

Query: 61 VPI 64
          V +
Sbjct: 61 VRV 54

[Close]

BLAST of Csa4G124910.1 vs. Swiss-Prot
Match: HD1_ORYSJ (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.7e-55
Identity = 134/350 (38.29%), Postives = 188/350 (53.71%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVP----ISRGGAMFRSVEE 79
           +CEACER PA   C+ADAA+LC ACD ++HSANPL      +P    ++       +V  
Sbjct: 77  VCEACERAPAALACRADAAALCVACDVQVHSANPLPAI--TIPATSVLAEAVVATATVLG 136

Query: 80  EDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNGNNEEDDDE 139
           + +EE  SWLL++   +N+N NNNNN+N+     +     +  Y           E D+ 
Sbjct: 137 DKDEEVDSWLLLSKDSDNNNNNNNNNDNDNNDNNNSNSSNNGMYFG---------EVDEY 196

Query: 140 FETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNH---------------- 199
           F+ +  N+Y          ++ E N++  + +H    +QQQQ                  
Sbjct: 197 FDLVGYNSYYD--------NRIENNQDRQYGMHEQQEQQQQQQEMQKEFAEKEGSECVVP 256

Query: 200 ---EILLEQSYGG--LVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMS 259
               +L EQ + G  +V A +    ++  S +Y   ++++IS SSME G+VP+ST     
Sbjct: 257 SQITMLSEQQHSGYGVVGADQAASMTAGVS-AYTDSISNSISFSSMEAGIVPDSTVI--- 316

Query: 260 DISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKT 319
           D+  S +  P G I+LFSG         S   +   S MDREARVLRYREKKK RKFEKT
Sbjct: 317 DMPNSRILTPAGAINLFSG--------PSLQMSLHFSSMDREARVLRYREKKKARKFEKT 376

Query: 320 IRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           IRY +RKAYAE RPRIKGRFAKR+DV++++D+ +S   + D  YG VP F
Sbjct: 377 IRYETRKAYAEARPRIKGRFAKRSDVQIEVDQMFSTAALSDGSYGTVPWF 395

HSP 2 Score: 61.2 bits (147), Expect = 2.5e-08
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 1


Query: 10 GSGGNGWG---AVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI 64
          G GG G G   A  C+ C   P+   C+ADAA LCA+CDA +H+AN +A RH+RV +
Sbjct: 21 GGGGEGSGCPWARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV 77

[Close]

BLAST of Csa4G124910.1 vs. Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-43
Identity = 131/360 (36.39%), Postives = 174/360 (48.33%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI--------SRGGAMFR 79
           +CE CE+ PA   CKADAA+LC  CD +IHSANPLARRH+RVP+        S G     
Sbjct: 48  MCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHT 107

Query: 80  SVE----------------EEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEE 139
           +V                 EE+EEEAASWLL+   K                 + G+  E
Sbjct: 108 AVNFLDDCYFSDIDGNGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPE 167

Query: 140 ---DDEYL-----KFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHL 199
                +YL      +++ +  N   D + E+L+ N+   G D VVP+             
Sbjct: 168 MNTGQQYLFSDPDPYLDLDYGNV--DPKVESLEQNS--SGTDGVVPV------------- 227

Query: 200 HHHHHEQQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNG---FLTHAISVSSMEVGV 259
                E +      + E  +       E   T     F+Y G    ++H++S SSMEVGV
Sbjct: 228 -----ENRTVRIPTVNENCF-------EMDFTGGSKGFTYGGGYNCISHSVSSSSMEVGV 287

Query: 260 VPESTATIMSDISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYRE 319
           VP+  +  ++D+S     P             A+P     +P   L+  +REARV+RYRE
Sbjct: 288 VPDGGS--VADVSYPYGGPATS---------GADPGTQRAVP---LTSAEREARVMRYRE 347

Query: 320 KKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           K+K RKFEKTIRYASRKAYAE RPRIKGRFAKRTD     D      +   +G+G+VP+F
Sbjct: 348 KRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIF--SGFGLVPTF 362

HSP 2 Score: 52.8 bits (125), Expect = 8.9e-06
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 1


Query: 20 ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRV 62
          +C++C+   A   C+ DAA LC +CD+++H+AN LA RH RV
Sbjct: 5  LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARV 46

[Close]

BLAST of Csa4G124910.1 vs. TrEMBL
Match: A0A0A0KY36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G124910 PE=4 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 3.3e-201
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1


Query: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
           MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR
Sbjct: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60

Query: 61  VPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYL 120
           VPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYL
Sbjct: 61  VPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYL 120

Query: 121 KFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE 180
           KFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE
Sbjct: 121 KFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE 180

Query: 181 ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN 240
           ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN
Sbjct: 181 ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN 240

Query: 241 MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR 300
           MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR
Sbjct: 241 MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR 300

Query: 301 KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF
Sbjct: 301 KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 344

[Close]

BLAST of Csa4G124910.1 vs. TrEMBL
Match: V4STR5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012022mg PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 3.8e-88
Identity = 201/344 (58.43%), Postives = 230/344 (66.86%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI---------SRGGAMF 79
           +CE+CE+ PA F+CKADAASLCAACDAEIHSANPLARRHQRVPI          R GA  
Sbjct: 62  VCESCEQAPAAFLCKADAASLCAACDAEIHSANPLARRHQRVPILPISGSVYGGRTGATP 121

Query: 80  RSVEEED--EEEAASWLLM-NPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNG 139
               E+D  EEEAASWLL+ NPGKN  N NN NNN    FL  GE    DEYL  V++ G
Sbjct: 122 EGHHEDDQDEEEAASWLLLSNPGKNCGNGNNGNNNG---FLFGGEV---DEYLDLVDYTG 181

Query: 140 NNEEDDDEFETLKNNNYGGG-------GDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE 199
            N+  D ++ T  NN    G       GDSVVP+     NK  DHH H       QQN +
Sbjct: 182 GNQYLD-QYSTGNNNQQQHGVAQKGYVGDSVVPVQCELANK--DHHRH-------QQNFQ 241

Query: 200 ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN 259
           + L+             + SSK  +SYNG ++H++SVSS ++GVVPEST   MSDISIS+
Sbjct: 242 LGLD-------------YDSSKAGYSYNGSISHSVSVSSTDLGVVPEST---MSDISISH 301

Query: 260 MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR 319
            RPPKGTIDLFSG          QMP  QL+PMDREARVLRYREKKKTRKFEKTIRYASR
Sbjct: 302 SRPPKGTIDLFSG-------PPIQMPP-QLTPMDREARVLRYREKKKTRKFEKTIRYASR 361

Query: 320 KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           KAYAETRPRIKGRFAKRTD EV++D+ +S  LM D GYGIVPSF
Sbjct: 362 KAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPGYGIVPSF 365

[Close]

BLAST of Csa4G124910.1 vs. TrEMBL
Match: V4STR5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012022mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.6e-06
Identity = 28/61 (45.90%), Postives = 36/61 (59.02%), Query Frame = 1


Query: 1  MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
          M+K E      GGN W A +C+ C        CKAD A LC+ACD+ +H AN +A RH+R
Sbjct: 1  MMKEESNDGSGGGNSW-ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHER 60

Query: 61 V 62
          V
Sbjct: 61 V 60

HSP 2 Score: 331.3 bits (848), Expect = 1.4e-87
Identity = 200/344 (58.14%), Postives = 229/344 (66.57%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI---------SRGGAMF 79
           +CE+CE+ PA F+CKADAASLCAACDAEIHSANPLARRHQRVPI          R GA  
Sbjct: 62  VCESCEQAPAAFLCKADAASLCAACDAEIHSANPLARRHQRVPILPISGSVYGGRTGATP 121

Query: 80  RSVEEED--EEEAASWLLM-NPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNG 139
               E+D  EEEAASWLL+ NPGKN  N NN NNN    FL  GE    DEYL  V++ G
Sbjct: 122 EGHHEDDQDEEEAASWLLLSNPGKNCGNGNNGNNNG---FLFGGEV---DEYLDLVDYTG 181

Query: 140 NNEEDDDEFETLKNNNYGGG-------GDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE 199
            N+  D ++    NN    G       GDSVVP+     NK  DHH H       QQN +
Sbjct: 182 GNQYLD-QYSNGNNNQQQHGVAQKGYVGDSVVPVQCELANK--DHHRH-------QQNFQ 241

Query: 200 ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN 259
           + L+             + SSK  +SYNG ++H++SVSS ++GVVPEST   MSDISIS+
Sbjct: 242 LGLD-------------YDSSKAGYSYNGSISHSVSVSSTDLGVVPEST---MSDISISH 301

Query: 260 MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR 319
            RPPKGTIDLFSG          QMP  QL+PMDREARVLRYREKKKTRKFEKTIRYASR
Sbjct: 302 SRPPKGTIDLFSG-------PPIQMPP-QLTPMDREARVLRYREKKKTRKFEKTIRYASR 361

Query: 320 KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           KAYAETRPRIKGRFAKRTD EV++D+ +S  LM D GYGIVPSF
Sbjct: 362 KAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPGYGIVPSF 365

[Close]

BLAST of Csa4G124910.1 vs. TrEMBL
Match: A0A067EUU9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017819mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.6e-06
Identity = 28/61 (45.90%), Postives = 36/61 (59.02%), Query Frame = 1


Query: 1  MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
          M+K E      GGN W A +C+ C        CKAD A LC+ACD+ +H AN +A RH+R
Sbjct: 1  MMKEESNDGSGGGNSW-ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHER 60

Query: 61 V 62
          V
Sbjct: 61 V 60

HSP 2 Score: 330.1 bits (845), Expect = 3.2e-87
Identity = 199/367 (54.22%), Postives = 233/367 (63.49%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPISR-GGAMFRS------ 79
           +CEACER PA F+CKADAASLC ACDA+IHSANPLARRHQRVPI    G ++ S      
Sbjct: 62  VCEACERAPAAFLCKADAASLCTACDADIHSANPLARRHQRVPILPISGCLYSSQATEQG 121

Query: 80  ------------------------VEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFL 139
                                   + EEDE+EAASWLL+NP KNN+N NN N  NNG F 
Sbjct: 122 EMGVAVSAGAETEDGFLSQEGDDTIYEEDEDEAASWLLLNPVKNNNNNNNTNTQNNGFFF 181

Query: 140 LSGEDEEDDEYLKFVEFNG----NNEEDD--DEFETLKNNNYGG-----GGDSVVPIDQF 199
                 E DEYL  VE+N     NN+  D   + +  +   YG      GGDSVVPI Q 
Sbjct: 182 ----GAEVDEYLDLVEYNTCADQNNQFTDHHQQHDQQQQQQYGVPYKNYGGDSVVPIHQ- 241

Query: 200 EGNKNHDHHLHHHHHEQQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISV 259
            G     H L      Q+Q  H++ LE             + SSK ++SYNG L+H++SV
Sbjct: 242 HGEVGKAHQL------QKQSFHQLGLE-------------YESSKAAYSYNGSLSHSVSV 301

Query: 260 SSMEVGVVPESTATIMSDISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREA 319
           SSM+VGVVP+ST   MSDISIS+ R PKGTIDLFSG          QMP  QLSPMDREA
Sbjct: 302 SSMDVGVVPDST---MSDISISHPRTPKGTIDLFSG-------PTIQMPT-QLSPMDREA 361

Query: 320 RVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAG 345
           RVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT++EV++D+ ++  LM + G
Sbjct: 362 RVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMEVEVDQMFATSLMAENG 393

[Close]

BLAST of Csa4G124910.1 vs. TrEMBL
Match: D9ZIX4_MALDO (COL domain class transcription factor OS=Malus domestica GN=COL8 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.2e-61
Identity = 170/414 (41.06%), Postives = 223/414 (53.86%), Query Frame = 1


Query: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
           MLK +     +  N W A +C+ C        C+AD+A LC+ CDA IH+AN +A RH+R
Sbjct: 1   MLKEDQSNGTATANNW-ARVCDTCRAAACTVYCRADSAYLCSGCDATIHAANRVASRHER 60

Query: 61  VPI----SRGGAMFRSVEEEDEEEAASWLL--------MNPGKNNDNK------------ 120
           V +     R  A F       + +AAS            NP      +            
Sbjct: 61  VWVCEACERAPAAFLC-----KADAASLCTACDADIHSANPLARRHQRVPILPISGCLYS 120

Query: 121 -NNNNNNNNGMFLLSGEDEEDDEYLKFVEFNGNN---EEDDDE------FETLKNNN--- 180
                    G+ + +G + ED     F+   G++   EED+DE         +KNNN   
Sbjct: 121 SQATEQGEMGVAVSAGAETEDG----FLSQEGDDTIYEEDEDEAASWLLLNPVKNNNNNN 180

Query: 181 ----------YGGGGDSVVPIDQFE--GNKNHDHHLHHHHHEQQQQNHEILLEQSYGG-- 240
                     +G   D  + + ++    ++N+    HH  H+QQQQ    +  ++YGG  
Sbjct: 181 NTNTQNNGFFFGAEVDEYLDLVEYNTCADQNNQFTDHHQQHDQQQQQQYGVPYKNYGGDS 240

Query: 241 LVD-------------ASEFFH------TSSKPSFSYNGFLTHAISVSSMEVGVVPESTA 300
           +V                + FH       SSK ++SYNG L+H++SVSSM+VGVVP+ST 
Sbjct: 241 VVPIHQHGEVGKAHQLQKQSFHQLGLEYESSKAAYSYNGSLSHSVSVSSMDVGVVPDST- 300

Query: 301 TIMSDISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRK 345
             MSDISIS+ R PKGTIDLFSG          QMP  QLSPMDREARVLRYREKKKTRK
Sbjct: 301 --MSDISISHPRTPKGTIDLFSG-------PTIQMP-TQLSPMDREARVLRYREKKKTRK 360

HSP 2 Score: 327.4 bits (838), Expect = 2.1e-86
Identity = 193/351 (54.99%), Postives = 233/351 (66.38%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI-------------SRG 79
           +CEACER PA FICKADAASLC ACDA+IHSANPLARRHQRVPI               G
Sbjct: 64  VCEACERAPAAFICKADAASLCTACDADIHSANPLARRHQRVPILPISGGLHSPHVGHMG 123

Query: 80  GA----MF-----RSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDE-ED 139
           G     MF       V EE+E+EAASWLL NP KN++N+N+NNN N  +F   G    E 
Sbjct: 124 GENTEDMFVEEREEEVGEEEEDEAASWLLSNPVKNSNNQNSNNNTNGFLFYGGGGGGGEV 183

Query: 140 DEYLKFVEFNGNNEEDDDEFE---TLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHE 199
           +EYL FVE+  N   D +++    +L+   YG   D VVP+   E  K  D  ++HH   
Sbjct: 184 EEYLDFVEYTSNACGDQNQYSDQNSLQQQQYGA--DGVVPVQCLEAGK--DQMINHH--- 243

Query: 200 QQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIM 259
           QQ +N ++ LE               SSKP++SYNG ++H++S+SSM+VGVV +ST   M
Sbjct: 244 QQYRNFQLGLE-------------FDSSKPTYSYNGSISHSVSISSMDVGVVQDST---M 303

Query: 260 SDISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEK 319
           S+ISIS+ R PKGTIDLFSG          QMP+ QLSP DREARVLRYREKKKTRKFEK
Sbjct: 304 SEISISHSRTPKGTIDLFSG-------PPMQMPS-QLSPRDREARVLRYREKKKTRKFEK 363

Query: 320 TIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           TIRYASRKAYAETRPRIKGRFAKRTDV+ ++D+ +S  LM + GY IVPSF
Sbjct: 364 TIRYASRKAYAETRPRIKGRFAKRTDVDFEVDQMFSTTLMTETGYSIVPSF 383

[Close]

BLAST of Csa4G124910.1 vs. TAIR10
Match: AT3G02380.1 (AT3G02380.1 CONSTANS-like 2)

HSP 1 Score: 259.2 bits (661), Expect = 3.5e-69
Identity = 161/336 (47.92%), Postives = 198/336 (58.93%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI---------SRGGAMF 79
           +C++CE  PA F+CKADAASLC ACDAEIHSANPLARRHQRVPI         S   +  
Sbjct: 58  VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSET 117

Query: 80  RSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNGNNE 139
            +  +ED+ E ASWLL NPGKN  N+NN        FL   E      YL  V+++ +  
Sbjct: 118 DADNDEDDREVASWLLPNPGKNIGNQNNG-------FLFGVE------YLDLVDYSSSM- 177

Query: 140 EDDDEFETLKNNNY--GGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHEILLEQSYG 199
             D++FE  +  +Y    GGD VVP+   E            H +Q QQN ++ +     
Sbjct: 178 --DNQFEDNQYTHYQRSFGGDGVVPLQVEESTS---------HLQQSQQNFQLGINY--- 237

Query: 200 GLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISNMRPPKGTI 259
           G    + + + S K        L H+ SVSSM++ VVPESTA   SDI++ + R  K TI
Sbjct: 238 GFSSGAHYNNNSLKD-------LNHSASVSSMDISVVPESTA---SDITVQHPRTTKETI 297

Query: 260 DLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRP 319
           D  SG     P    Q    QL+PM+REARVLRYREKKKTRKF+KTIRYASRKAYAE RP
Sbjct: 298 DQLSG----PPTQVVQ----QLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRP 347

Query: 320 RIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           RIKGRFAKR + E + +  +S  LM + GYGIVPSF
Sbjct: 358 RIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347

HSP 2 Score: 185.3 bits (469), Expect = 6.5e-47
Identity = 133/366 (36.34%), Postives = 183/366 (50.00%), Query Frame = 1


Query: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
           MLK E     S  +G  A  C+ C        C+AD+A LC  CDA +H+AN +A RH+R
Sbjct: 1   MLKEE-----SNESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHER 60

Query: 61  VPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYL 120
           V + +      +      + A+     +   ++ N     +    +  LS         +
Sbjct: 61  VRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSS---M 120

Query: 121 KFVEFNGNNEEDDDEFETL-----------KNNNYGGGGDSVVPIDQFEGNKNHDHHLHH 180
              E + +N+EDD E  +            +NN +  G + +  +D      N      +
Sbjct: 121 APSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGVEYLDLVDYSSSMDNQFEDNQY 180

Query: 181 HHHEQQQQNHEIL---LEQSYGGLVDASEFFHTSSKPSFS----YNG----FLTHAISVS 240
            H+++      ++   +E+S   L  + + F       FS    YN      L H+ SVS
Sbjct: 181 THYQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASVS 240

Query: 241 SMEVGVVPESTATIMSDISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREAR 300
           SM++ VVPESTA   SDI++ + R  K TID  SG     P    Q    QL+PM+REAR
Sbjct: 241 SMDISVVPESTA---SDITVQHPRTTKETIDQLSG----PPTQVVQ----QLTPMEREAR 300

Query: 301 VLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGY 345
           VLRYREKKKTRKF+KTIRYASRKAYAE RPRIKGRFAKR + E + +  +S  LM + GY
Sbjct: 301 VLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGY 347

[Close]

BLAST of Csa4G124910.1 vs. TAIR10
Match: AT5G15840.1 (AT5G15840.1 B-box type zinc finger protein with CCT domain)

HSP 1 Score: 231.1 bits (588), Expect = 1.0e-60
Identity = 154/353 (43.63%), Postives = 201/353 (56.94%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI-SRGGAMFRSV----- 79
           +CE+CER PA F+C+AD ASLC ACD+E+HSANPLARRHQRVPI    G  F S+     
Sbjct: 62  VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHH 121

Query: 80  -EEEDEEEAASWLLMN--PGKNND-------------NKNNNNNNNNGMFLLSGEDEEDD 139
             E+   +    L+++   G+  D             +  NNNN NNG+          D
Sbjct: 122 QSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLF-------SD 181

Query: 140 EYLKFVEFNGNNE-EDDDEFETLKNN----NYGGGGDSVVPIDQFEGNKNHDHHLHHHHH 199
           EYL  V++N + + +   E+   + N        GGD VVP+ + E ++ H  H      
Sbjct: 182 EYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPL-KLEESRGHQCH------ 241

Query: 200 EQQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATI 259
              QQN +  ++  YG           SS   ++ NG + H   +SSME GVVPESTA +
Sbjct: 242 --NQQNFQFNIK--YG-----------SSGTHYNDNGSINHNAYISSMETGVVPESTACV 301

Query: 260 MSDISISNMRPPKGTIDLFSGMIAAEPAAASQM-PAAQLSPMDREARVLRYREKKKTRKF 319
               + S+ R PKGT++        +P  ASQM    QLSPMDREARVLRYREK+KTRKF
Sbjct: 302 ---TTASHPRTPKGTVE-------QQPDPASQMITVTQLSPMDREARVLRYREKRKTRKF 361

Query: 320 EKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           EKTIRYASRKAYAE RPR+ GRFAKR ++E + ++ ++  LM + GYGIVPSF
Sbjct: 362 EKTIRYASRKAYAEIRPRVNGRFAKR-EIEAE-EQGFNTMLMYNTGYGIVPSF 373

HSP 2 Score: 183.7 bits (465), Expect = 1.9e-46
Identity = 143/386 (37.05%), Postives = 194/386 (50.26%), Query Frame = 1


Query: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
           MLK E    GSG N   A  C+ C        C AD+A LC +CDA++HSAN +A RH+R
Sbjct: 1   MLKQESNDIGSGENN-RARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKR 60

Query: 61  VPI----SRGGAMFRSVEEE-------DEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLL 120
           V +     R  A F    ++       D E  ++  L    +       + N+ + M   
Sbjct: 61  VRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTT 120

Query: 121 SGEDEE---DDEYLKFVEFNGNNEEDDDEFETL--------KNNNYGGGG----DSVVPI 180
             + E+   D E    V+     E D D  E          KNNN    G    D  + +
Sbjct: 121 HHQSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLFSDEYLNL 180

Query: 181 DQFEGNKNHDHHLHHHHHEQQ----QQNH------EILLEQSYGGLVDASEFF-----HT 240
             +  + ++     +  H+Q     Q ++       + LE+S G      + F     + 
Sbjct: 181 VDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLKLEESRGHQCHNQQNFQFNIKYG 240

Query: 241 SSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISNMRPPKGTIDLFSGMIAAEP 300
           SS   ++ NG + H   +SSME GVVPESTA +    + S+ R PKGT++        +P
Sbjct: 241 SSGTHYNDNGSINHNAYISSMETGVVPESTACV---TTASHPRTPKGTVE-------QQP 300

Query: 301 AAASQM-PAAQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 345
             ASQM    QLSPMDREARVLRYREK+KTRKFEKTIRYASRKAYAE RPR+ GRFAKR 
Sbjct: 301 DPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR- 360

[Close]

BLAST of Csa4G124910.1 vs. TAIR10
Match: AT5G15850.1 (AT5G15850.1 CONSTANS-like 1)

HSP 1 Score: 223.4 bits (568), Expect = 2.2e-58
Identity = 145/348 (41.67%), Postives = 191/348 (54.89%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI------SRGGAMFRSV 79
           +C++CER PA F CKADAASLC  CD+EIHSANPLARRHQRVPI      S         
Sbjct: 54  VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHS 113

Query: 80  EEEDEEEAASWLLMNPGKNNDNK---------NNNNN--NNNGMFLLSGEDEEDDEYLKF 139
            E    +  + L++   + ++++         N+  N  NNNG  +        DE+L  
Sbjct: 114 CETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSI-------GDEFLNL 173

Query: 140 VEFNGNNEEDDDEFE------TLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQ 199
           V+++ ++++  D+         +   +Y  G D VVP+ Q E +K            Q+Q
Sbjct: 174 VDYSSSDKQFTDQSNQYQLDCNVPQRSY--GEDGVVPL-QIEVSKG---------MYQEQ 233

Query: 200 QNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDI 259
           QN ++ +     G + +S             NG L+H ++VSSM++GVVPEST    SD 
Sbjct: 234 QNFQLSINCGSWGALRSS-------------NGSLSHMVNVSSMDLGVVPESTT---SDA 293

Query: 260 SISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIR 319
           ++SN R PK   D                PA  LSP DREARVLRYREKKK RKFEKTIR
Sbjct: 294 TVSNPRSPKAVTD-----------QPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIR 353

Query: 320 YASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           YASRKAYAE RPRIKGRFAK+ DV+ + ++ +S  +  D GYGIVPSF
Sbjct: 354 YASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

HSP 2 Score: 54.3 bits (129), Expect = 1.7e-07
Identity = 25/63 (39.68%), Postives = 34/63 (53.97%), Query Frame = 1


Query: 1  MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
          MLK E  +         A  C+ C        C+AD+A LC++CDA++H+AN LA RH+R
Sbjct: 1  MLKVESNW---------AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHER 54

Query: 61 VPI 64
          V +
Sbjct: 61 VRV 54

[Close]

BLAST of Csa4G124910.1 vs. TAIR10
Match: AT5G24930.1 (AT5G24930.1 CONSTANS-like 4)

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-44
Identity = 131/360 (36.39%), Postives = 174/360 (48.33%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI--------SRGGAMFR 79
           +CE CE+ PA   CKADAA+LC  CD +IHSANPLARRH+RVP+        S G     
Sbjct: 92  MCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHT 151

Query: 80  SVE----------------EEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEE 139
           +V                 EE+EEEAASWLL+   K                 + G+  E
Sbjct: 152 AVNFLDDCYFSDIDGNGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPE 211

Query: 140 ---DDEYL-----KFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHL 199
                +YL      +++ +  N   D + E+L+ N+   G D VVP+             
Sbjct: 212 MNTGQQYLFSDPDPYLDLDYGNV--DPKVESLEQNS--SGTDGVVPV------------- 271

Query: 200 HHHHHEQQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNG---FLTHAISVSSMEVGV 259
                E +      + E  +       E   T     F+Y G    ++H++S SSMEVGV
Sbjct: 272 -----ENRTVRIPTVNENCF-------EMDFTGGSKGFTYGGGYNCISHSVSSSSMEVGV 331

Query: 260 VPESTATIMSDISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYRE 319
           VP+  +  ++D+S     P             A+P     +P   L+  +REARV+RYRE
Sbjct: 332 VPDGGS--VADVSYPYGGPATS---------GADPGTQRAVP---LTSAEREARVMRYRE 391

Query: 320 KKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           K+K RKFEKTIRYASRKAYAE RPRIKGRFAKRTD     D      +   +G+G+VP+F
Sbjct: 392 KRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIF--SGFGLVPTF 406

HSP 2 Score: 52.8 bits (125), Expect = 5.0e-07
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 1


Query: 20 ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRV 62
          +C++C+   A   C+ DAA LC +CD+++H+AN LA RH RV
Sbjct: 49 LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARV 90

[Close]

BLAST of Csa4G124910.1 vs. TAIR10
Match: AT2G24790.1 (AT2G24790.1 CONSTANS-like 3)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-40
Identity = 117/335 (34.93%), Postives = 153/335 (45.67%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPIS----------RGGAM 79
           +CE CE+ PA   CKADAA+LC  CD +IHSANPL+RRH+RVPI+             + 
Sbjct: 50  LCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSS 109

Query: 80  FRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNGNN 139
              V+E+  +  ASWLL   G    N  ++                    L + +    +
Sbjct: 110 VNFVDEDGGDVTASWLLAKEGIEITNLFSD--------------------LDYPKIEVTS 169

Query: 140 EEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHEILLEQSYGG 199
           EE+              G D VVP+                        +++ L + Y  
Sbjct: 170 EENS------------SGNDGVVPVQ-----------------------NKLFLNEDY-- 229

Query: 200 LVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISNMRPPKGTID 259
                 F  ++SK S     F+   +S  +++V +VPES                     
Sbjct: 230 ----FNFDLSASKISQQGFNFINQTVSTRTIDVPLVPES--------------------- 289

Query: 260 LFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR 319
              G + AE    ++ PA QLSP +REARVLRYREK+K RKFEKTIRYASRKAYAE RPR
Sbjct: 290 ---GGVTAE-MTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPR 294

Query: 320 IKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           IKGRFAKRTD            +    G+G+VPSF
Sbjct: 350 IKGRFAKRTDSR----ENDGGDVGVYGGFGVVPSF 294

HSP 2 Score: 55.1 bits (131), Expect = 1.0e-07
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 1


Query: 20 ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRV 62
          +C++C+   A   C+ADAA LC  CD +IH+AN LA RH+RV
Sbjct: 7  LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERV 48

[Close]

BLAST of Csa4G124910.1 vs. NCBI nr
Match: gi|449438975|ref|XP_004137263.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Cucumis sativus])

HSP 1 Score: 708.8 bits (1828), Expect = 4.8e-201
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1


Query: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
           MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR
Sbjct: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60

Query: 61  VPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYL 120
           VPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYL
Sbjct: 61  VPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYL 120

Query: 121 KFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE 180
           KFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE
Sbjct: 121 KFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE 180

Query: 181 ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN 240
           ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN
Sbjct: 181 ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN 240

Query: 241 MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR 300
           MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR
Sbjct: 241 MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR 300

Query: 301 KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF
Sbjct: 301 KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 344

[Close]

BLAST of Csa4G124910.1 vs. NCBI nr
Match: gi|659111102|ref|XP_008455579.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Cucumis melo])

HSP 1 Score: 639.0 bits (1647), Expect = 4.7e-180
Identity = 317/350 (90.57%), Postives = 325/350 (92.86%), Query Frame = 1


Query: 1   MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
           MLKTEDEYR  GGNGW A ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR
Sbjct: 1   MLKTEDEYREGGGNGWAAGICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60

Query: 61  VPISRGGAMFRSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSGEDE---EDD 120
           VPIS GGAMFRSVEEEDEEEAASWLLMNPGKNN++  NNN+NNNGMFLL GEDE   EDD
Sbjct: 61  VPISSGGAMFRSVEEEDEEEAASWLLMNPGKNNNDNKNNNSNNNGMFLLGGEDEDEEEDD 120

Query: 121 EYLKFVEFNGNNEEDDDEFETLKNNNYGGGGDSVVPIDQFEGNKNHDHHLHHH---HHEQ 180
           +YLKFVEFNGNNEEDD EFE LKNNNYGGGGDSVVPIDQFEGNK+H HHLHHH   HHEQ
Sbjct: 121 DYLKFVEFNGNNEEDD-EFERLKNNNYGGGGDSVVPIDQFEGNKDHHHHLHHHLHHHHEQ 180

Query: 181 QQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMS 240
           QQQNHEILLEQSYGGLVDASEFFHTSSKPS+SYNGFLTHAISVSSMEVGVVPEST T MS
Sbjct: 181 QQQNHEILLEQSYGGLVDASEFFHTSSKPSYSYNGFLTHAISVSSMEVGVVPESTTTTMS 240

Query: 241 DISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKT 300
           DISISN+RPPKGTIDLFSG  AAE A   QMPAAQLSPMDREARVLRYREKKKTRKFEKT
Sbjct: 241 DISISNVRPPKGTIDLFSGTTAAEVAVGIQMPAAQLSPMDREARVLRYREKKKTRKFEKT 300

Query: 301 IRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           IRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPL+PDAGYGIVPSF
Sbjct: 301 IRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLLPDAGYGIVPSF 349

[Close]

BLAST of Csa4G124910.1 vs. NCBI nr
Match: gi|567876585|ref|XP_006430882.1| (hypothetical protein CICLE_v10012022mg [Citrus clementina])

HSP 1 Score: 333.2 bits (853), Expect = 5.5e-88
Identity = 201/344 (58.43%), Postives = 230/344 (66.86%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI---------SRGGAMF 79
           +CE+CE+ PA F+CKADAASLCAACDAEIHSANPLARRHQRVPI          R GA  
Sbjct: 62  VCESCEQAPAAFLCKADAASLCAACDAEIHSANPLARRHQRVPILPISGSVYGGRTGATP 121

Query: 80  RSVEEED--EEEAASWLLM-NPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNG 139
               E+D  EEEAASWLL+ NPGKN  N NN NNN    FL  GE    DEYL  V++ G
Sbjct: 122 EGHHEDDQDEEEAASWLLLSNPGKNCGNGNNGNNNG---FLFGGEV---DEYLDLVDYTG 181

Query: 140 NNEEDDDEFETLKNNNYGGG-------GDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE 199
            N+  D ++ T  NN    G       GDSVVP+     NK  DHH H       QQN +
Sbjct: 182 GNQYLD-QYSTGNNNQQQHGVAQKGYVGDSVVPVQCELANK--DHHRH-------QQNFQ 241

Query: 200 ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN 259
           + L+             + SSK  +SYNG ++H++SVSS ++GVVPEST   MSDISIS+
Sbjct: 242 LGLD-------------YDSSKAGYSYNGSISHSVSVSSTDLGVVPEST---MSDISISH 301

Query: 260 MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR 319
            RPPKGTIDLFSG          QMP  QL+PMDREARVLRYREKKKTRKFEKTIRYASR
Sbjct: 302 SRPPKGTIDLFSG-------PPIQMPP-QLTPMDREARVLRYREKKKTRKFEKTIRYASR 361

Query: 320 KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           KAYAETRPRIKGRFAKRTD EV++D+ +S  LM D GYGIVPSF
Sbjct: 362 KAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPGYGIVPSF 365

[Close]

BLAST of Csa4G124910.1 vs. NCBI nr
Match: gi|567876585|ref|XP_006430882.1| (hypothetical protein CICLE_v10012022mg [Citrus clementina])

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-06
Identity = 28/61 (45.90%), Postives = 36/61 (59.02%), Query Frame = 1


Query: 1  MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
          M+K E      GGN W A +C+ C        CKAD A LC+ACD+ +H AN +A RH+R
Sbjct: 1  MMKEESNDGSGGGNSW-ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHER 60

Query: 61 V 62
          V
Sbjct: 61 V 60

HSP 2 Score: 331.3 bits (848), Expect = 2.1e-87
Identity = 200/344 (58.14%), Postives = 229/344 (66.57%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPI---------SRGGAMF 79
           +CE+CE+ PA F+CKADAASLCAACDAEIHSANPLARRHQRVPI          R GA  
Sbjct: 62  VCESCEQAPAAFLCKADAASLCAACDAEIHSANPLARRHQRVPILPISGSVYGGRTGATP 121

Query: 80  RSVEEED--EEEAASWLLM-NPGKNNDNKNNNNNNNNGMFLLSGEDEEDDEYLKFVEFNG 139
               E+D  EEEAASWLL+ NPGKN  N NN NNN    FL  GE    DEYL  V++ G
Sbjct: 122 EGHHEDDQDEEEAASWLLLSNPGKNCGNGNNGNNNG---FLFGGEV---DEYLDLVDYTG 181

Query: 140 NNEEDDDEFETLKNNNYGGG-------GDSVVPIDQFEGNKNHDHHLHHHHHEQQQQNHE 199
            N+  D ++    NN    G       GDSVVP+     NK  DHH H       QQN +
Sbjct: 182 GNQYLD-QYSNGNNNQQQHGVAQKGYVGDSVVPVQCELANK--DHHRH-------QQNFQ 241

Query: 200 ILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISN 259
           + L+             + SSK  +SYNG ++H++SVSS ++GVVPEST   MSDISIS+
Sbjct: 242 LGLD-------------YDSSKAGYSYNGSISHSVSVSSTDLGVVPEST---MSDISISH 301

Query: 260 MRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREARVLRYREKKKTRKFEKTIRYASR 319
            RPPKGTIDLFSG          QMP  QL+PMDREARVLRYREKKKTRKFEKTIRYASR
Sbjct: 302 SRPPKGTIDLFSG-------PPIQMPP-QLTPMDREARVLRYREKKKTRKFEKTIRYASR 361

Query: 320 KAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGYGIVPSF 345
           KAYAETRPRIKGRFAKRTD EV++D+ +S  LM D GYGIVPSF
Sbjct: 362 KAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPGYGIVPSF 365

[Close]

BLAST of Csa4G124910.1 vs. NCBI nr
Match: gi|641839955|gb|KDO58878.1| (hypothetical protein CISIN_1g017819mg [Citrus sinensis])

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-06
Identity = 28/61 (45.90%), Postives = 36/61 (59.02%), Query Frame = 1


Query: 1  MLKTEDEYRGSGGNGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQR 60
          M+K E      GGN W A +C+ C        CKAD A LC+ACD+ +H AN +A RH+R
Sbjct: 1  MMKEESNDGSGGGNSW-ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHER 60

Query: 61 V 62
          V
Sbjct: 61 V 60

HSP 2 Score: 331.3 bits (848), Expect = 2.1e-87
Identity = 195/368 (52.99%), Postives = 237/368 (64.40%), Query Frame = 1


Query: 20  ICEACERCPAEFICKADAASLCAACDAEIHSANPLARRHQRVPISR-GGAMF-------- 79
           +CEACER PA F+CKADAASLC ACDA+IHSANPLARRH RVPI    G ++        
Sbjct: 60  VCEACERAPAAFLCKADAASLCTACDADIHSANPLARRHHRVPILPISGCLYGPPATNPS 119

Query: 80  -------------------RSVEEEDEEEAASWLLMNPGKNNDNKNNNNNNNNGMFLLSG 139
                               +++EEDE+EAASWLL+NP KN++  NNNNN+ NG FL  G
Sbjct: 120 GSLTATAAGGDTADGFLGDETIDEEDEDEAASWLLLNPVKNSNGNNNNNNHGNG-FLFGG 179

Query: 140 EDEEDDEYLKFVEFN--GNNEEDD-------------DEFETLKNNNYGGGGDSVVPIDQ 199
           +    DEYL F E+N  G+N+  D               +   +  NYGGG DS+VP+  
Sbjct: 180 DA---DEYLDFAEYNSCGDNQFADPYNQQQQQKQQHQQHYVVPQQKNYGGG-DSIVPVQY 239

Query: 200 FEGNKNHDHHLHHHHHEQQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAIS 259
            EG            H+ QQQ +++ LE             + SSK + SYNG  ++++S
Sbjct: 240 GEGKT----------HQLQQQGYQLGLE-------------YESSKAAHSYNGSTSYSVS 299

Query: 260 VSSMEVGVVPESTATIMSDISISNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDRE 319
           VSSM+VGVVP+ST   MSDISIS+ RPPKGTIDLFSG          QMP+ QL+PMDRE
Sbjct: 300 VSSMDVGVVPDST---MSDISISHPRPPKGTIDLFSG-------PPIQMPS-QLTPMDRE 359

Query: 320 ARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDA 345
           ARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEV++++ +S  LM + 
Sbjct: 360 ARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEVEQMFSTALMAET 388

The following BLAST results are available for this feature:

BLAST of Csa4G124910.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COL2_ARATH	6.3e-68	47.92	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1	[more]
CONS_ARATH	1.8e-59	43.63	Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1	[more]
COL1_ARATH	3.8e-57	41.67	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1	[more]
HD1_ORYSJ	4.7e-55	38.29	Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1	[more]
COL4_ARATH	4.1e-43	36.39	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2	[more]

BLAST of Csa4G124910.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY36_CUCSA	3.3e-201	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G124910 PE=4 SV=1	[more]
V4STR5_9ROSI	3.8e-88	58.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012022mg PE=4 SV=1	[more]
V4STR5_9ROSI	1.6e-06	45.90	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012022mg PE=4 SV=1	[more]
A0A067EUU9_CITSI	1.6e-06	45.90	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017819mg PE=4 SV=1	[more]
D9ZIX4_MALDO	5.2e-61	41.06	COL domain class transcription factor OS=Malus domestica GN=COL8 PE=2 SV=1	[more]

BLAST of Csa4G124910.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02380.1	3.5e-69	47.92	CONSTANS-like 2	[more]
AT5G15840.1	1.0e-60	43.63	B-box type zinc finger protein with CCT domain	[more]
AT5G15850.1	2.2e-58	41.67	CONSTANS-like 1	[more]
AT5G24930.1	2.3e-44	36.39	CONSTANS-like 4	[more]
AT2G24790.1	1.5e-40	34.93	CONSTANS-like 3	[more]

BLAST of Csa4G124910.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438975\|ref\|XP_004137263.1\|	4.8e-201	100.00	PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Cucumis sativus]	[more]
gi\|659111102\|ref\|XP_008455579.1\|	4.7e-180	90.57	PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Cucumis melo]	[more]
gi\|567876585\|ref\|XP_006430882.1\|	5.5e-88	58.43	hypothetical protein CICLE_v10012022mg [Citrus clementina]	[more]
gi\|567876585\|ref\|XP_006430882.1\|	2.4e-06	45.90	hypothetical protein CICLE_v10012022mg [Citrus clementina]	[more]
gi\|641839955\|gb\|KDO58878.1\|	2.4e-06	45.90	hypothetical protein CISIN_1g017819mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000315	Znf_B-box
IPR010402	CCT_domain

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G124910	Csa4G124910	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa4G124910.1	Csa4G124910.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa4G124910.1.utr3p1	Csa4G124910.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa4G124910.1.cds2	Csa4G124910.1.cds2	CDS
Csa4G124910.1.cds1	Csa4G124910.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 20..63 score: 1.
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 16..63 score: 1.0
IPR000315	B-box-type zinc finger	PROFILE	PS50119	ZF_BBOX	coord: 16..63 score: 10
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 275..317 score: 6.4
IPR010402	CCT domain	PROFILE	PS51017	CCT	coord: 275..317 score: 16
None	No IPR available	PANTHER	PTHR31319	FAMILY NOT NAMED	coord: 19..344 score: 4.0E
None	No IPR available	PANTHER	PTHR31319:SF10	ZINC FINGER PROTEIN CONSTANS-RELATED	coord: 19..344 score: 4.0E