Csa3G895880.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G895880.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	ATR interacting protein
Location	Chr3 : 38682575 .. 38685176 (-)
Sequence length	969

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGTCATCTCATGGCAGTGGTGCTGTAGCTAGTACTAGACTCCCTGGCGCTGAATTGTTGTGTAAGAACAGAAACTTGAAGAAGAATATAAATTTAGTTCCTCAAGTAAATTGGGTATCTTTCTTTGAGGCAATGCATCAGGTTGCTAAGACACATAGTGCAAAATGTGTGAGAATTGAGGCCATTTCAGTCATGAATTTGATTCTGATGAGAAATAATACTTATCTGGAGAAGGAAAAGTAAGTTTGTGTTTTTGTAGTCTATATTTCAATATTTAAAACCAGAAACAACTAACATAATTATTACAGATTTGGTCAGGCACTTCTATTTGATAGTGTAGTTGAGTTTATCCGGAAGGAATCCGGTTCAGCTATACAAAAGCATGCCGTGCGTCTGCTATTCTTGATACTAAACTGTAAGGCTTAATAATTTCAGCTCATCCTTAGAAGATTTTTTTGGAACTTCGCAAGCTTATGACAATTTTTCTTAATAAATATCTGAGCTTTAAATTAGTAGGAAAGGCTATTCTTTTTTCTCTCTTGGAACTCAAATTTCAGAAGTATATTGCATTCAAACTTCAAACTTTTGATGACATTTCCATTTAGTGGATCTAGGTTATTGGTTCCTTAAGTTTTCTTTTGACATCTTTCTAGATTGAATTTTATGACATTGAACTTTGGACCTGGACCTGGGGTTTGTTTTTTATTAGTTAATTATCTTCACCTTATGCGAGAAACTGTAGATGCTTCATGCTAGCCATATTTGTTTGAACTTTTAGTCATAGATCTTATTGCAGTAGTTACCTGAACTCAAGTTTCCATTTATGTCCTTTACTTTCTAATAATGTTTGCTTTAATTTAGGTCCCACATTTTTTGTCGCGTTCTGTTCTGGTTGTAAAGAAGCAGAAGCTAATGAGGTTGGAAATGAAAATGTGAGAAGTGCAGGAGGTTTCCAGAAATTCCAAACCATCCTTCATGGTTTGGCAGATTGTCTTACATGTTCTGGAAATGGTATTGAGGTAAGCACCGTTAGAGATCCTCCATCAACTCCTCTCTTGTCTTTTTAACACCCCACTCAACCACAACTGATTGCGCTCACTTTTTTATTTGGTGAAAAATTGATTGATAACTCGACCCTGTGATAGATAGTAATAAACTTGGGATTTGAAACCTAAACACGTAGCTTAAAAGAGCTACTGCTATCATTGCCAATTGCTCTAACACTTGCTGTGAAAATAAGGAACTTGTCATAGTGGTAATTTATCTCTCTTTGTTTTAGAGTTCGGTTACTCTTGCCATAAAATTGAGGTTGATGAGAAAATTCTTGTGGGAATGTGAAGGAGGCACCCATTGGAATTTTCAATAGGCTGTAGTGGAAAAGATCTTGTTCGACTTTTGTGAGTGGAAGAAATGTCTTCAGTTTAGAGACAGGAGACCCACACTTGCAAAAGCCAGTCTATGCAAAATTGTTCTCTAACCTACTTTCACTAAATTTTTAGTATTCCTGCTTTGTAGCCAAGAGGGTTGATGTTTGGAGATGCGCATTGTTTATGACTATATGTCCTCTGCTCTAAACAATTTGAATTTGTTTTAAAAATTAGGTTAAATTACAAATCTAGTCCTTATGGTTTGGAAGTTAGAACTTTTAGCCCCCTAGGTTGATAAAATTCTTAGGAGAAACATTATTTACGAGGTTTTCCACAAGGACTAGATTCTAACTCTTAAAACCTTTAAGGACTAAATTCTAACTTTTTTCAAGATTATAGGGATCAAAATTTTAATTTAGCCTAAATTTTATAATTGGAAATCAGTTTTCAATTGTGAGCATAGAGGTAATTGTGATTATAACATTGTGTTCTATAAACTACGTGTTTGTTGTTTAGTAATTTTCCTTGTTCTTGCAGGAGTTGAAACTTCGTAAAAACACTGTTCTTTTGCTTGCCTTTCTGGCATCGTCCGGGAAAGCTGGCTTTGAGATCCTCACAAGCAACAAGCTGTATACATATTCAAATTTCCTGACTTTGATTCTTCAAGTTGTGGCTTCAGAACTTGAACAAGAAAAAACAGTCCCAGAGCCCATGGAAAATCTCGAGGAAAGGTAATCGATGAGCCTCTCTATGTTAATCGTAATATCAGTGACATTCCATAGCTTCCTCAAAAATATCATACAACTTTTCCTTTCCCTTGTTTCACAATCTTACACAGGGCGTTGCTGTTACGGGAAGTGCTTATACTTTTTAATAGACTTGCATCTCATTCATTATACTCAATGACGATCTTGCGAGTGGTGACAAACAGCAGAGATATGGCTACCCTCACAATTGATGTAACGAACAAGTTGTGCAGAAAAAACAATAGAAATGGGCAATTGGATAGCAAGAAAAGAAAGATGAGGGAATCTGAAGTCGTGGATTTAGCGCAGGTATTTCGGAAAAGACTTCTTTCATATTTAGGAAACAGCATATTATAAAAAGCGCTTTTAAAAAAATGCTCATTTACTTTGGCTTTGTCATGGCACAAAGTTAGGAGACTAAACTAATCGGTTTGAAATTTTGTCGAAATTTTGTAGAGTTAAAGTAATGTATATTCTTCAAGG

mRNA sequence

ATGGATGAGTCATCTCATGGCAGTGGTGCTGTAGCTAGTACTAGACTCCCTGGCGCTGAATTGTTGTGTAAGAACAGAAACTTGAAGAAGAATATAAATTTAGTTCCTCAAGTAAATTGGGTATCTTTCTTTGAGGCAATGCATCAGGTTGCTAAGACACATAGTGCAAAATGTGTGAGAATTGAGGCCATTTCAGTCATGAATTTGATTCTGATGAGAAATAATACTTATCTGGAGAAGGAAAAATTTGGTCAGGCACTTCTATTTGATAGTGTAGTTGAGTTTATCCGGAAGGAATCCGGTTCAGCTATACAAAAGCATGCCGTGCGTCTGCTATTCTTGATACTAAACTGTCCCACATTTTTTGTCGCGTTCTGTTCTGGTTGTAAAGAAGCAGAAGCTAATGAGGTTGGAAATGAAAATGTGAGAAGTGCAGGAGGTTTCCAGAAATTCCAAACCATCCTTCATGGTTTGGCAGATTGTCTTACATGTTCTGGAAATGGTATTGAGGAGTTGAAACTTCGTAAAAACACTGTTCTTTTGCTTGCCTTTCTGGCATCGTCCGGGAAAGCTGGCTTTGAGATCCTCACAAGCAACAAGCTGTATACATATTCAAATTTCCTGACTTTGATTCTTCAAGTTGTGGCTTCAGAACTTGAACAAGAAAAAACAGTCCCAGAGCCCATGGAAAATCTCGAGGAAAGGGCGTTGCTGTTACGGGAAGTGCTTATACTTTTTAATAGACTTGCATCTCATTCATTATACTCAATGACGATCTTGCGAGTGGTGACAAACAGCAGAGATATGGCTACCCTCACAATTGATGTAACGAACAAGTTGTGCAGAAAAAACAATAGAAATGGGCAATTGGATAGCAAGAAAAGAAAGATGAGGGAATCTGAAGTCGTGGATTTAGCGCAGGTATTTCGGAAAAGACTTCTTTCATATTTAGGAAACAGCATATTATAA

Coding sequence (CDS)

ATGGATGAGTCATCTCATGGCAGTGGTGCTGTAGCTAGTACTAGACTCCCTGGCGCTGAATTGTTGTGTAAGAACAGAAACTTGAAGAAGAATATAAATTTAGTTCCTCAAGTAAATTGGGTATCTTTCTTTGAGGCAATGCATCAGGTTGCTAAGACACATAGTGCAAAATGTGTGAGAATTGAGGCCATTTCAGTCATGAATTTGATTCTGATGAGAAATAATACTTATCTGGAGAAGGAAAAATTTGGTCAGGCACTTCTATTTGATAGTGTAGTTGAGTTTATCCGGAAGGAATCCGGTTCAGCTATACAAAAGCATGCCGTGCGTCTGCTATTCTTGATACTAAACTGTCCCACATTTTTTGTCGCGTTCTGTTCTGGTTGTAAAGAAGCAGAAGCTAATGAGGTTGGAAATGAAAATGTGAGAAGTGCAGGAGGTTTCCAGAAATTCCAAACCATCCTTCATGGTTTGGCAGATTGTCTTACATGTTCTGGAAATGGTATTGAGGAGTTGAAACTTCGTAAAAACACTGTTCTTTTGCTTGCCTTTCTGGCATCGTCCGGGAAAGCTGGCTTTGAGATCCTCACAAGCAACAAGCTGTATACATATTCAAATTTCCTGACTTTGATTCTTCAAGTTGTGGCTTCAGAACTTGAACAAGAAAAAACAGTCCCAGAGCCCATGGAAAATCTCGAGGAAAGGGCGTTGCTGTTACGGGAAGTGCTTATACTTTTTAATAGACTTGCATCTCATTCATTATACTCAATGACGATCTTGCGAGTGGTGACAAACAGCAGAGATATGGCTACCCTCACAATTGATGTAACGAACAAGTTGTGCAGAAAAAACAATAGAAATGGGCAATTGGATAGCAAGAAAAGAAAGATGAGGGAATCTGAAGTCGTGGATTTAGCGCAGGTATTTCGGAAAAGACTTCTTTCATATTTAGGAAACAGCATATTATAA

Protein sequence

MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVRIEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPTFFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVLLLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLREVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRESEVVDLAQVFRKRLLSYLGNSIL*

Homology

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BLAST of Csa3G895880.1 vs. TrEMBL
Match: A0A0A0LHX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895880 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 1.6e-176
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 1


Query: 1   MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR 60
           MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR
Sbjct: 1   MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR 60

Query: 61  IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT 120
           IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT
Sbjct: 61  IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT 120

Query: 121 FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL 180
           FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL
Sbjct: 121 FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL 180

Query: 181 LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR 240
           LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR
Sbjct: 181 LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR 240

Query: 241 EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 300
           EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES
Sbjct: 241 EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 300

Query: 301 EVVDLAQVFRKRLLSYLGNSIL 323
           EVVDLAQVFRKRLLSYLGNSIL
Sbjct: 301 EVVDLAQVFRKRLLSYLGNSIL 322

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BLAST of Csa3G895880.1 vs. TrEMBL
Match: A0A061GE03_THECC (Dimerizations, putative OS=Theobroma cacao GN=TCM_016627 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.2e-77
Identity = 154/318 (48.43%), Postives = 212/318 (66.67%), Query Frame = 1


Query: 3   ESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQ-VNWVSFFEAMHQVAKTHSAKCVRI 62
           + ++GS      R   AE LCK  +     +L+   +NW+  FE+MH +    S +CVR+
Sbjct: 424 DGTYGSCMPTGVRPSEAETLCKKGHCSTGSSLLFSCINWIYLFESMHHIVMKSSEECVRL 483

Query: 63  EAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPTF 122
           +A+S+MN+ILMR + Y ++EKFG   +F S+ + +RKE+G   QK AV  L L+LNCP  
Sbjct: 484 KAVSIMNVILMRTDAYTDREKFGLIQVFGSISQLLRKEAGLLAQKEAVHTLHLLLNCPKL 543

Query: 123 FVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVLL 182
            V FC GC  A   +   EN      FQ+F  IL GLADC+ CSGN ++ L+LRKN + L
Sbjct: 544 VVTFCCGCTVAAGADTDKEN---TAAFQEFTLILQGLADCIACSGNSLQALELRKNAITL 603

Query: 183 LAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTV-PEPMENLEERALLLR 242
           LAF+ASSGK GFEIL + KL   +NFLTLILQ++ SE++ E +V PE  E    R LL+R
Sbjct: 604 LAFIASSGKFGFEILVNYKLSGEANFLTLILQLLVSEIDLEASVYPESGETFRARTLLIR 663

Query: 243 EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 302
           EVLIL NRL S+ ++S T+LR++TNSRDM +LTIDV N+L RK  +    DS  ++MRES
Sbjct: 664 EVLILLNRLVSNPVHSATVLRLLTNSRDMVSLTIDVANRLSRKEPKRRHSDSITKQMRES 723

Query: 303 EVVDLAQVFRKRLLSYLG 319
           E+VDL Q+F++R+ +YLG
Sbjct: 724 EIVDLGQIFKRRVSTYLG 738

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BLAST of Csa3G895880.1 vs. TrEMBL
Match: B9RZ30_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1316930 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 5.0e-74
Identity = 149/287 (51.92%), Postives = 209/287 (72.82%), Query Frame = 1


Query: 38  VNWVSFFEAMHQVAKTHSAKCVRIEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIR 97
           VNWVS FE +HQ+A   +   VR+EAIS+MN+IL+R N + E+E FGQA +F+S+ +F++
Sbjct: 369 VNWVSLFELLHQIAVRKTQGRVRLEAISIMNVILLRTNAHAEREIFGQAPVFESIAQFLK 428

Query: 98  KESGSAIQKHAVRLLFLILNCPTFFVAFCSGCKEAE--ANEVGNENVRSAGGFQKFQTIL 157
           +E+GS +QK ++ LLFL+LNCP     F SGCKE +  AN+  N + R       F  IL
Sbjct: 429 REAGSYVQKESLDLLFLLLNCPKLLSVFHSGCKEGDIAANDANNASTRKG-----FSAIL 488

Query: 158 HGLADCLTCSGNGIEELKLRKNTVLLLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVV 217
            GLADC+ CSGN IE+++LRK  V++LAFLA+SGK+GFEIL ++KL+   NFL LILQV+
Sbjct: 489 EGLADCIACSGNDIEDIQLRKRAVIMLAFLAASGKSGFEILVNHKLHGGKNFLMLILQVL 548

Query: 218 ASELEQEKTV-PEPMENLEERALLLREVLILFNRLASHSLYSMTILRVVTNSRDMATLTI 277
            SE++ E +V  E  E+++ R LL+REVLIL NRL S+  YS  +L+V+T SR+MA+LTI
Sbjct: 549 ISEMDVEMSVSSESAESIKARVLLMREVLILLNRLVSNPGYSAVVLQVLTASREMASLTI 608

Query: 278 DVTNKLCRKNNRNGQLDSKKRKMRESEVVDLAQVFRKRLLSYLGNSI 322
           D+  +L RK+      DS  R+MRESE+VDLA+V +KR+ +YLG++I
Sbjct: 609 DIVTRLSRKDQILRLSDSITRQMRESEIVDLARVLKKRVFTYLGDTI 650

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BLAST of Csa3G895880.1 vs. TrEMBL
Match: A0A0B0P075_GOSAR (Phosphoribosylformylglycinamidine synthase 2 OS=Gossypium arboreum GN=F383_21352 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-73
Identity = 149/304 (49.01%), Postives = 212/304 (69.74%), Query Frame = 1


Query: 19  AELLC-KNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVRIEAISVMNLILMRNNTY 78
           A+ +C K R    + +L   VNW+  FE MH +    S +CVR+EA+S+MN+ILMR++ Y
Sbjct: 405 AKYICGKGRWDTSSASLFSHVNWIYLFEFMHLIVMKSSEECVRLEAVSIMNVILMRSDAY 464

Query: 79  LEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPTFFVAFCSGC-KEAEANE 138
            E+E+FG + +F+SV + ++ E+G  +QK AV  L+L+LNCP   V FCS C  EA A+ 
Sbjct: 465 TERERFGLSEVFESVSQLLKMEAGLLVQKEAVHSLYLLLNCPKLVVTFCSACTTEASADA 524

Query: 139 V-GNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVLLLAFLASSGKAGFEI 198
             G EN  +    + F  IL GLADC+ CSGN ++ L+LRKN + LLAF+ASSGK+GFEI
Sbjct: 525 ANGTENTAAT---ETFTMILEGLADCIACSGNSLQALELRKNAITLLAFVASSGKSGFEI 584

Query: 199 LTSNKLYTYSNFLTLILQVVASELEQEKTV-PEPMENLEERALLLREVLILFNRLASHSL 258
           L +NKL   +NFLTLI+Q++ASE++ E +V  E  E    R LL+REVLIL NRL S+ +
Sbjct: 585 LVNNKLSREANFLTLIMQLLASEIDLEASVNAESDETFRARTLLIREVLILLNRLVSNPI 644

Query: 259 YSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRESEVVDLAQVFRKRLL 318
           +S T+LR++TNSRDM +LT+D+ N+L RK       DS  ++MRESE+VDL ++F++R+ 
Sbjct: 645 HSATVLRLLTNSRDMVSLTVDIANRLSRKEQIQRLSDSIAKQMRESEIVDLGRLFKRRVS 704

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BLAST of Csa3G895880.1 vs. TrEMBL
Match: A0A067L7F7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03855 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 8.0e-72
Identity = 149/324 (45.99%), Postives = 222/324 (68.52%), Query Frame = 1


Query: 2   DESSHGSGAVASTRLPGAELLCKNRNLKKNINL-VPQVNWVSFFEAMHQVAKTHSAKCVR 61
           +E+S  S     T     ++LCK      +    +  VNW+S F+ +HQ+A + + + VR
Sbjct: 135 EEASCASRRPFGTTFSDLQILCKKGTWNVDTGFSLSCVNWISLFDLLHQIALSKTEERVR 194

Query: 62  IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT 121
            +A+SVMN+IL+R + + E+E FG+A +F+S+ +F+++E+GS +Q+ A+ LLFL+LNCP 
Sbjct: 195 YKAVSVMNVILLRTDAHTERETFGRAPIFESISQFLKREAGSHVQREALHLLFLLLNCPK 254

Query: 122 FFVAFCSGCKE-AEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTV 181
               FCS CKE + AN+  N     A  ++ F TIL GLADC+ CS N I++++LRK  V
Sbjct: 255 LLSVFCSCCKEHSTANDDNN-----ASTWKGFSTILEGLADCIACSANSIQDMELRKRAV 314

Query: 182 LLLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVP-EPMENLEERALL 241
           ++LAFLASSGK GFEIL ++ L    NF+ LILQ++ SE++ E +VP EP E+++ R LL
Sbjct: 315 IMLAFLASSGKPGFEILVNHNLPGEKNFIMLILQLLISEMDVEVSVPSEPAESIKTRTLL 374

Query: 242 LREVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKK-RKM 301
           +RE LIL NRL S++ YS  +LRV+T SRDMA+LTID+ ++L RK+      DS   + +
Sbjct: 375 MREALILLNRLVSNTGYSAIVLRVLTASRDMASLTIDIVSRLSRKDQMPRLFDSMMIQPI 434

Query: 302 RESEVVDLAQVFRKRLLSYLGNSI 322
           RESE+VDLA+V +KR+ +YLG+ I
Sbjct: 435 RESEIVDLARVLKKRVFTYLGDEI 453

[Close]

BLAST of Csa3G895880.1 vs. TAIR10
Match: AT5G45610.1 (AT5G45610.1 protein dimerizations)

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-57
Identity = 114/285 (40.00%), Postives = 182/285 (63.86%), Query Frame = 1


Query: 39  NWVSFFEAMHQVAKTHSAKCVRIEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRK 98
           NW S F+ M+Q+A   + + V+ EA+S+MN+I+M  + Y  +E F    +F+S+   +RK
Sbjct: 362 NWHSLFKLMNQIASKRTEQDVKQEALSIMNIIVMSTDAYTARESFVSKEVFESISLLLRK 421

Query: 99  ESGSAIQKHAVRLLFLILNCPTFFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGL 158
           E G  ++K A+ L +L+LNCP  +  F S  +E  +++  N++  +    + F  I  GL
Sbjct: 422 EGGLHVRKEAIHLFYLLLNCPKLYDTFDSLHEEKNSSDTENDSEGNFFALEAFGKIFEGL 481

Query: 159 ADCLTCSGNGIEELKLRKNTVLLLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASE 218
           ADCLT      E+L+L +N +++LA  ASSG +G+E+L+S+KL   S+FL LIL ++ +E
Sbjct: 482 ADCLTSPRKTSEDLELCRNVIMILALAASSGNSGYELLSSHKLPQDSSFLMLILHLLVAE 541

Query: 219 LEQEKTVPEP-MENLEERALLLREVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVT 278
           ++ E T   P  E  + R LL+RE+LIL NRL S    S TIL+ +T SRDMA+LT+D  
Sbjct: 542 IDSESTEFHPKAEIFKARTLLMREILILLNRLVSGLSSSATILKELTTSRDMASLTVDAA 601

Query: 279 NKLCRKNNRNGQLDSKKRKMRESEVVDLAQVFRKRLLSYLGNSIL 323
            +L RK N  G+ +S   +MR +E++DLA++F+KR+ ++LG++ +
Sbjct: 602 TRLSRKRNLLGKPESSVERMRNTEIMDLARIFKKRVFAFLGDNTI 646

[Close]

BLAST of Csa3G895880.1 vs. NCBI nr
Match: gi|449437242|ref|XP_004136401.1| (PREDICTED: uncharacterized protein LOC101220265 [Cucumis sativus])

HSP 1 Score: 626.7 bits (1615), Expect = 2.2e-176
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 1


Query: 1   MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR 60
           MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR
Sbjct: 411 MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR 470

Query: 61  IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT 120
           IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT
Sbjct: 471 IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT 530

Query: 121 FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL 180
           FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL
Sbjct: 531 FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL 590

Query: 181 LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR 240
           LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR
Sbjct: 591 LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR 650

Query: 241 EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 300
           EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES
Sbjct: 651 EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 710

Query: 301 EVVDLAQVFRKRLLSYLGNSIL 323
           EVVDLAQVFRKRLLSYLGNSIL
Sbjct: 711 EVVDLAQVFRKRLLSYLGNSIL 732

[Close]

BLAST of Csa3G895880.1 vs. NCBI nr
Match: gi|700205209|gb|KGN60342.1| (hypothetical protein Csa_3G895880 [Cucumis sativus])

HSP 1 Score: 626.7 bits (1615), Expect = 2.2e-176
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 1


Query: 1   MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR 60
           MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR
Sbjct: 1   MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR 60

Query: 61  IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT 120
           IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT
Sbjct: 61  IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT 120

Query: 121 FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL 180
           FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL
Sbjct: 121 FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL 180

Query: 181 LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR 240
           LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR
Sbjct: 181 LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR 240

Query: 241 EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 300
           EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES
Sbjct: 241 EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 300

Query: 301 EVVDLAQVFRKRLLSYLGNSIL 323
           EVVDLAQVFRKRLLSYLGNSIL
Sbjct: 301 EVVDLAQVFRKRLLSYLGNSIL 322

[Close]

BLAST of Csa3G895880.1 vs. NCBI nr
Match: gi|659132123|ref|XP_008466031.1| (PREDICTED: uncharacterized protein LOC103503583 [Cucumis melo])

HSP 1 Score: 588.6 bits (1516), Expect = 6.8e-165
Identity = 306/322 (95.03%), Postives = 309/322 (95.96%), Query Frame = 1


Query: 1   MDESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMHQVAKTHSAKCVR 60
           MDESSHGS   ASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAM QVAKTHSAKCVR
Sbjct: 407 MDESSHGS---ASTRLPGAELLCKNRNLKKNINLVPQVNWVSFFEAMRQVAKTHSAKCVR 466

Query: 61  IEAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT 120
           IEAISVMNLILMRNN YLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT
Sbjct: 467 IEAISVMNLILMRNNAYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPT 526

Query: 121 FFVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVL 180
           FF AFCSGCKEAE  EVGNENVRSAGGFQKFQTILHGLADC TC GNGIEELKLRKNTVL
Sbjct: 527 FFAAFCSGCKEAETAEVGNENVRSAGGFQKFQTILHGLADCFTCFGNGIEELKLRKNTVL 586

Query: 181 LLAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTVPEPMENLEERALLLR 240
           LLAFLASSGKAGFEIL SNKLYTYSNFLTLILQVVASELEQEKTV EP+ENLEERALLLR
Sbjct: 587 LLAFLASSGKAGFEILISNKLYTYSNFLTLILQVVASELEQEKTVREPVENLEERALLLR 646

Query: 241 EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 300
           EVLIL NRLASHSLYSMTILRV+TNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES
Sbjct: 647 EVLILLNRLASHSLYSMTILRVLTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 706

Query: 301 EVVDLAQVFRKRLLSYLGNSIL 323
           EVV+LAQVFRKRLLSYLGNSIL
Sbjct: 707 EVVELAQVFRKRLLSYLGNSIL 725

[Close]

BLAST of Csa3G895880.1 vs. NCBI nr
Match: gi|590680046|ref|XP_007040753.1| (Dimerizations, putative [Theobroma cacao])

HSP 1 Score: 297.4 bits (760), Expect = 3.1e-77
Identity = 154/318 (48.43%), Postives = 212/318 (66.67%), Query Frame = 1


Query: 3   ESSHGSGAVASTRLPGAELLCKNRNLKKNINLVPQ-VNWVSFFEAMHQVAKTHSAKCVRI 62
           + ++GS      R   AE LCK  +     +L+   +NW+  FE+MH +    S +CVR+
Sbjct: 424 DGTYGSCMPTGVRPSEAETLCKKGHCSTGSSLLFSCINWIYLFESMHHIVMKSSEECVRL 483

Query: 63  EAISVMNLILMRNNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPTF 122
           +A+S+MN+ILMR + Y ++EKFG   +F S+ + +RKE+G   QK AV  L L+LNCP  
Sbjct: 484 KAVSIMNVILMRTDAYTDREKFGLIQVFGSISQLLRKEAGLLAQKEAVHTLHLLLNCPKL 543

Query: 123 FVAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVLL 182
            V FC GC  A   +   EN      FQ+F  IL GLADC+ CSGN ++ L+LRKN + L
Sbjct: 544 VVTFCCGCTVAAGADTDKEN---TAAFQEFTLILQGLADCIACSGNSLQALELRKNAITL 603

Query: 183 LAFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKTV-PEPMENLEERALLLR 242
           LAF+ASSGK GFEIL + KL   +NFLTLILQ++ SE++ E +V PE  E    R LL+R
Sbjct: 604 LAFIASSGKFGFEILVNYKLSGEANFLTLILQLLVSEIDLEASVYPESGETFRARTLLIR 663

Query: 243 EVLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRES 302
           EVLIL NRL S+ ++S T+LR++TNSRDM +LTIDV N+L RK  +    DS  ++MRES
Sbjct: 664 EVLILLNRLVSNPVHSATVLRLLTNSRDMVSLTIDVANRLSRKEPKRRHSDSITKQMRES 723

Query: 303 EVVDLAQVFRKRLLSYLG 319
           E+VDL Q+F++R+ +YLG
Sbjct: 724 EIVDLGQIFKRRVSTYLG 738

[Close]

BLAST of Csa3G895880.1 vs. NCBI nr
Match: gi|297742006|emb|CBI33793.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 296.6 bits (758), Expect = 5.3e-77
Identity = 160/310 (51.61%), Postives = 219/310 (70.65%), Query Frame = 1


Query: 15  RLPGAELLCKNRNLKKNIN-LVPQVNWVSFFEAMHQVAKTHSAKCVRIEAISVMNLILMR 74
           RL  AE+L K  + +     LV  VNWVS FE MHQ+A   + +CV +EA+S+MN+ILMR
Sbjct: 33  RLFDAEVLRKKEHWEHGTAMLVSCVNWVSLFELMHQIAVGSTEECVILEAVSIMNVILMR 92

Query: 75  NNTYLEKEKFGQALLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPTFFVAFCSGCKEA- 134
           +N YLE+EKFG  L+  SV + +RKE+G  +QK A+ LL+L+LN P   V FCSGCKE  
Sbjct: 93  SNAYLEREKFG-TLVLKSVSQLLRKEAGLCVQKQAMHLLYLLLNSPNLLVIFCSGCKEEM 152

Query: 135 EANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVLLLAFLASSGKAG 194
           +  E  N + ++A  F++F  IL GLA+C+ C GNG +ELKLR+N +++LAFLAS GK+G
Sbjct: 153 KGAEDENNDAKNASAFREFSVILDGLANCVACCGNGTQELKLRRNAIIMLAFLAS-GKSG 212

Query: 195 FEILTSNKLYTYSNFLTLILQVVASELEQEK-TVPEPMENLEERALLLREVLILFNRLAS 254
           FEIL  +KL   +NFL LILQ++ SE++ E     EP E  +ER LL+RE LI  NRL S
Sbjct: 213 FEILLGHKLSKQTNFLVLILQLLVSEMDVEVGKSTEPPEIFKERTLLIREALIFLNRLVS 272

Query: 255 HSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRESEVVDLAQVFRK 314
           +  YS  +LRV+T+SRD+A+LTID+ N+L R    + Q ++  R+MRESE+VDLA+VFRK
Sbjct: 273 NPSYSTAVLRVLTSSRDVASLTIDIANRLSRVGQGHWQSENAARQMRESEIVDLARVFRK 332

Query: 315 RLLSYLGNSI 322
           R+ SYLG+ +
Sbjct: 333 RVFSYLGDKL 340

The following BLAST results are available for this feature:

BLAST of Csa3G895880.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHX7_CUCSA	1.6e-176	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G895880 PE=4 SV=1	[more]
A0A061GE03_THECC	2.2e-77	48.43	Dimerizations, putative OS=Theobroma cacao GN=TCM_016627 PE=4 SV=1	[more]
B9RZ30_RICCO	5.0e-74	51.92	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1316930 PE=4 SV=1	[more]
A0A0B0P075_GOSAR	1.1e-73	49.01	Phosphoribosylformylglycinamidine synthase 2 OS=Gossypium arboreum GN=F383_21352...	[more]
A0A067L7F7_JATCU	8.0e-72	45.99	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03855 PE=4 SV=1	[more]

BLAST of Csa3G895880.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45610.1	1.7e-57	40.00	protein dimerizations	[more]

BLAST of Csa3G895880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437242\|ref\|XP_004136401.1\|	2.2e-176	100.00	PREDICTED: uncharacterized protein LOC101220265 [Cucumis sativus]	[more]
gi\|700205209\|gb\|KGN60342.1\|	2.2e-176	100.00	hypothetical protein Csa_3G895880 [Cucumis sativus]	[more]
gi\|659132123\|ref\|XP_008466031.1\|	6.8e-165	95.03	PREDICTED: uncharacterized protein LOC103503583 [Cucumis melo]	[more]
gi\|590680046\|ref\|XP_007040753.1\|	3.1e-77	48.43	Dimerizations, putative [Theobroma cacao]	[more]
gi\|297742006\|emb\|CBI33793.3\|	5.3e-77	51.61	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa3G895880	Csa3G895880	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa3G895880.1	Csa3G895880.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G895880.1.utr3p1	Csa3G895880.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G895880.1.cds5	Csa3G895880.1.cds5	CDS
Csa3G895880.1.cds4	Csa3G895880.1.cds4	CDS
Csa3G895880.1.cds3	Csa3G895880.1.cds3	CDS
Csa3G895880.1.cds2	Csa3G895880.1.cds2	CDS
Csa3G895880.1.cds1	Csa3G895880.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35761	FAMILY NOT NAMED	coord: 15..322 score: 1.7
None	No IPR available	PANTHER	PTHR35761:SF1	ATR INTERACTING PROTEIN	coord: 15..322 score: 1.7