Csa3G874400.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G874400.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Pentatricopeptide repeat-containing protein; contains IPR002885 (Pentatricopeptide repeat), IPR011990 (Tetratricopeptide-like helical)
Location	Chr3 : 36614885 .. 36616918 (+)
Sequence length	1605

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAACTGTGTGAATTCCACTAAACTAAACCCTCCAAAAACCTTCGTCTCTGCTACCGGAGCTGACCAAAACTTCATCTAGGACAAGATTCCATTGATGGCTTTGATCAAATCGAAGCTTAATCTTCCTCCCTTTCTATCATCTCTCTCCCACCGTATTCAGAATCACCGTTCCTTCTCATCCTCTCCTTCAATTTCAGACCCTCCCCTTCAAGACGACCTCGCCACCGATTCACCTCAAAATGCCTCAATTCCTCTCCTCTCGCCGGAGCAAATCCAGGTTTCCGAAAAATTCCACGCTCTAATCAAGGAATACTATCGAAGAAATCCCGGTCCCGATTCAACTCCACCATGCCCTAATTTCACTATTTCCTCTCTTTCCAACGACCTATCCCAAATCTCAGCCCCCCATTCCGTCTCTCCGGCCGTCGTTCGTTACGTCATCGAGAAATCCGGTGCCGTCCGTCATGGCATCCCTTTTCTTCCAGCCCTCGCGTTCTTCAACTGGGCGACGGCGGGAGAGGGTTTCGAGCACTCTCCACAGCCATACAACGAAATGATTGACCTAGCCGGTAAGGTAAAACAATTTGGATTAGCTTGGTATTTGATTGATTTGATGAAAGCTAGAAATGTAGAAATTACTGTTGTAACTTTCTCCATGCTTGTGCGGCGGTATGTGAGAGCTGGATTGGCGGCGGAGGCAGTTCATGCGTTTAATCGCATGGAGGACTATGGCTGTAATGCTGACATCATTGCTTTTTCCAATGTTATCAGCATTCTGTGCAAGAAGAGAAGGGCAGTTGAAGCCCAATCATTTTTTGATAATCTAAAACATAAATTCGAACCTGATGTTATTGTGTACACTAGCTTAGTTCATGGATGGTGTCGAGCAGGTGATATCTCAGAGGCTGAAAGTGTATTTAGAGAGATGAAGATGGCAGGTATTAGCCCTAATGTTTATACTTATAGCATTGTGATTGATGCCTTGTGTAGATCTGGTCAAATTACTCGTGCCCATGATGTTTTCGCTGAGATGCTCGATGCTGGTTGCAATCCAAATTCAGTTACATTTAACAATCTTATAAGAGTTCATCTGAGAGCTGGTAGAACAGAGAAGGTGCTGCAAGTTTATAACCAAATGAAGAGATTGCGTTGTGCTGCTGACTTAATTACTTATAACTTCCTCATCGAAACTCATTGCAAGGATGACAATCTTGGAGAGGCTATAAAAGTTCTCAACTCAATGGCTAAGAATGATTGCACCCCCAATGCATCGTCTTTTAACCCTATATTCAGGTGTATTGCAAAGTCGCAAGATGTAAACGGTGCACATCGGATGTTTGCTAGGATGAAGGAAGTAGGTTGTAAGCCAAATACAGTGACGTACAATATCTTGATGCGAATGTTTGCCGTACCGAAATCTGCTGATATGATTTTCAAGTTGAAGAAGGAGATGGACGAGGAAGAAGTTGAGCCTAACTTTAATACATACCGAGAACTGATAGCATTATATTGTGGAATGGGGCATTGGAACCATGCTTACATGTTCTTCAGGGAAATGATTGATGAGAAATGCATAAAACCCAGCATGCCTTTGTATAAGATGGTTTTGGAAGAGCTAAGAAAGGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGATAAGATGGTTGAGAGAGGGTTCGCCTCAAGGAACCTGTAGAATAACTCGCATCTTTTACTTTCTAATCCGTATTTGTAATCACAAATGCTTCGAGATAAGAAGTTATAGCAGTTGGAAATGGTGTTGCTGATATGAAACAATGTACAGACAGAGGCATATCTCGTATTTCTTTGGATCCTAAACATGAAATGAGGAATTGGGTGGAAGCCACTCGTCTGTTCTATGAGAGATCTCTACGGCAAAATCAGAATCAGAAAGGACAAGGTACCGAGATTACTAGAATTTGATTGCAGCCTATGATTTTTTGTTCGGGTGAATTTTGAAGATTCAGTATGATCAAATTATAATGGATTATTAATTACCCTTTTAAATT

mRNA sequence

ATGGCTTTGATCAAATCGAAGCTTAATCTTCCTCCCTTTCTATCATCTCTCTCCCACCGTATTCAGAATCACCGTTCCTTCTCATCCTCTCCTTCAATTTCAGACCCTCCCCTTCAAGACGACCTCGCCACCGATTCACCTCAAAATGCCTCAATTCCTCTCCTCTCGCCGGAGCAAATCCAGGTTTCCGAAAAATTCCACGCTCTAATCAAGGAATACTATCGAAGAAATCCCGGTCCCGATTCAACTCCACCATGCCCTAATTTCACTATTTCCTCTCTTTCCAACGACCTATCCCAAATCTCAGCCCCCCATTCCGTCTCTCCGGCCGTCGTTCGTTACGTCATCGAGAAATCCGGTGCCGTCCGTCATGGCATCCCTTTTCTTCCAGCCCTCGCGTTCTTCAACTGGGCGACGGCGGGAGAGGGTTTCGAGCACTCTCCACAGCCATACAACGAAATGATTGACCTAGCCGGTAAGGTAAAACAATTTGGATTAGCTTGGTATTTGATTGATTTGATGAAAGCTAGAAATGTAGAAATTACTGTTGTAACTTTCTCCATGCTTGTGCGGCGGTATGTGAGAGCTGGATTGGCGGCGGAGGCAGTTCATGCGTTTAATCGCATGGAGGACTATGGCTGTAATGCTGACATCATTGCTTTTTCCAATGTTATCAGCATTCTGTGCAAGAAGAGAAGGGCAGTTGAAGCCCAATCATTTTTTGATAATCTAAAACATAAATTCGAACCTGATGTTATTGTGTACACTAGCTTAGTTCATGGATGGTGTCGAGCAGGTGATATCTCAGAGGCTGAAAGTGTATTTAGAGAGATGAAGATGGCAGGTATTAGCCCTAATGTTTATACTTATAGCATTGTGATTGATGCCTTGTGTAGATCTGGTCAAATTACTCGTGCCCATGATGTTTTCGCTGAGATGCTCGATGCTGGTTGCAATCCAAATTCAGTTACATTTAACAATCTTATAAGAGTTCATCTGAGAGCTGGTAGAACAGAGAAGGTGCTGCAAGTTTATAACCAAATGAAGAGATTGCGTTGTGCTGCTGACTTAATTACTTATAACTTCCTCATCGAAACTCATTGCAAGGATGACAATCTTGGAGAGGCTATAAAAGTTCTCAACTCAATGGCTAAGAATGATTGCACCCCCAATGCATCGTCTTTTAACCCTATATTCAGGTGTATTGCAAAGTCGCAAGATGTAAACGGTGCACATCGGATGTTTGCTAGGATGAAGGAAGTAGGTTGTAAGCCAAATACAGTGACGTACAATATCTTGATGCGAATGTTTGCCGTACCGAAATCTGCTGATATGATTTTCAAGTTGAAGAAGGAGATGGACGAGGAAGAAGTTGAGCCTAACTTTAATACATACCGAGAACTGATAGCATTATATTGTGGAATGGGGCATTGGAACCATGCTTACATGTTCTTCAGGGAAATGATTGATGAGAAATGCATAAAACCCAGCATGCCTTTGTATAAGATGGTTTTGGAAGAGCTAAGAAAGGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGATAAGATGGTTGAGAGAGGGTTCGCCTCAAGGAACCTGTAG

Coding sequence (CDS)

ATGGCTTTGATCAAATCGAAGCTTAATCTTCCTCCCTTTCTATCATCTCTCTCCCACCGTATTCAGAATCACCGTTCCTTCTCATCCTCTCCTTCAATTTCAGACCCTCCCCTTCAAGACGACCTCGCCACCGATTCACCTCAAAATGCCTCAATTCCTCTCCTCTCGCCGGAGCAAATCCAGGTTTCCGAAAAATTCCACGCTCTAATCAAGGAATACTATCGAAGAAATCCCGGTCCCGATTCAACTCCACCATGCCCTAATTTCACTATTTCCTCTCTTTCCAACGACCTATCCCAAATCTCAGCCCCCCATTCCGTCTCTCCGGCCGTCGTTCGTTACGTCATCGAGAAATCCGGTGCCGTCCGTCATGGCATCCCTTTTCTTCCAGCCCTCGCGTTCTTCAACTGGGCGACGGCGGGAGAGGGTTTCGAGCACTCTCCACAGCCATACAACGAAATGATTGACCTAGCCGGTAAGGTAAAACAATTTGGATTAGCTTGGTATTTGATTGATTTGATGAAAGCTAGAAATGTAGAAATTACTGTTGTAACTTTCTCCATGCTTGTGCGGCGGTATGTGAGAGCTGGATTGGCGGCGGAGGCAGTTCATGCGTTTAATCGCATGGAGGACTATGGCTGTAATGCTGACATCATTGCTTTTTCCAATGTTATCAGCATTCTGTGCAAGAAGAGAAGGGCAGTTGAAGCCCAATCATTTTTTGATAATCTAAAACATAAATTCGAACCTGATGTTATTGTGTACACTAGCTTAGTTCATGGATGGTGTCGAGCAGGTGATATCTCAGAGGCTGAAAGTGTATTTAGAGAGATGAAGATGGCAGGTATTAGCCCTAATGTTTATACTTATAGCATTGTGATTGATGCCTTGTGTAGATCTGGTCAAATTACTCGTGCCCATGATGTTTTCGCTGAGATGCTCGATGCTGGTTGCAATCCAAATTCAGTTACATTTAACAATCTTATAAGAGTTCATCTGAGAGCTGGTAGAACAGAGAAGGTGCTGCAAGTTTATAACCAAATGAAGAGATTGCGTTGTGCTGCTGACTTAATTACTTATAACTTCCTCATCGAAACTCATTGCAAGGATGACAATCTTGGAGAGGCTATAAAAGTTCTCAACTCAATGGCTAAGAATGATTGCACCCCCAATGCATCGTCTTTTAACCCTATATTCAGGTGTATTGCAAAGTCGCAAGATGTAAACGGTGCACATCGGATGTTTGCTAGGATGAAGGAAGTAGGTTGTAAGCCAAATACAGTGACGTACAATATCTTGATGCGAATGTTTGCCGTACCGAAATCTGCTGATATGATTTTCAAGTTGAAGAAGGAGATGGACGAGGAAGAAGTTGAGCCTAACTTTAATACATACCGAGAACTGATAGCATTATATTGTGGAATGGGGCATTGGAACCATGCTTACATGTTCTTCAGGGAAATGATTGATGAGAAATGCATAAAACCCAGCATGCCTTTGTATAAGATGGTTTTGGAAGAGCTAAGAAAGGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGATAAGATGGTTGAGAGAGGGTTCGCCTCAAGGAACCTGTAG

Protein sequence

MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQIQVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL*

Homology

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BLAST of Csa3G874400.1 vs. Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 3.7e-200
Identity = 346/538 (64.31%), Postives = 429/538 (79.74%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNAS--IPLLSPE 60
           MAL++SKL+L   LS +S  +    S S++  +SD    +  AT +   +    PLL+PE
Sbjct: 1   MALLRSKLHLSRTLSFISPLLPKTFSTSATSLLSDHENDESAATITAAVSVPISPLLTPE 60

Query: 61  QIQVSEKFHALIKEYYRRNP-GPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIE 120
             Q  EKFH++IK++YR+NP  P+     P+ T+ +LS D SQI     VSP+VVR VIE
Sbjct: 61  DTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQ-VSPSVVRCVIE 120

Query: 121 KSGAVRHGIPFLPALAFFNWATAGEGFEH-SPQPYNEMIDLAGKVKQFGLAWYLIDLMKA 180
           K G+VRHGIP   +LAFFNWAT+ + ++H SP PYNEMIDL+GKV+QF LAW+LIDLMK+
Sbjct: 121 KCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKS 180

Query: 181 RNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVE 240
           RNVEI++ TF++L+RRYVRAGLA+EAVH FNRMEDYGC  D IAFS VIS L +KRRA E
Sbjct: 181 RNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASE 240

Query: 241 AQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDA 300
           AQSFFD+LK +FEPDVIVYT+LV GWCRAG+ISEAE VF+EMK+AGI PNVYTYSIVIDA
Sbjct: 241 AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA 300

Query: 301 LCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAAD 360
           LCR GQI+RAHDVFA+MLD+GC PN++TFNNL+RVH++AGRTEKVLQVYNQMK+L C  D
Sbjct: 301 LCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 360

Query: 361 LITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFA 420
            ITYNFLIE HC+D+NL  A+KVLN+M K  C  NAS+FN IFR I K +DVNGAHRM++
Sbjct: 361 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 420

Query: 421 RMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMG 480
           +M E  C+PNTVTYNILMRMF   KS DM+ K+KKEMD++EVEPN NTYR L+ ++CGMG
Sbjct: 421 KMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMG 480

Query: 481 HWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           HWN+AY  F+EM++EKC+ PS+ LY+MVL +LR+AGQLKKHEELV+KM+++G  +R L
Sbjct: 481 HWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537

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BLAST of Csa3G874400.1 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 8.6e-56
Identity = 119/364 (32.69%), Postives = 202/364 (55.49%), Query Frame = 1


Query: 134 FFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRY 193
           FF W+     +EHS + Y+ MI+   K++Q+ L W LI+ M+ + + + V TF +++R+Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKY 179

Query: 194 VRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVI 253
            RA    EA++AFN ME Y    +++AF+ ++S LCK +   +AQ  F+N++ +F PD  
Sbjct: 180 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK 239

Query: 254 VYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEM 313
            Y+ L+ GW +  ++ +A  VFREM  AG  P++ TYSI++D LC++G++  A  +   M
Sbjct: 240 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 299

Query: 314 LDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNL 373
             + C P +  ++ L+  +    R E+ +  + +M+R    AD+  +N LI   CK + +
Sbjct: 300 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 359

Query: 374 GEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNIL 433
               +VL  M     TPN+ S N I R + +  + + A  +F +M +V C+P+  TY ++
Sbjct: 360 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMV 419

Query: 434 MRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKC 493
           ++MF   K  +   K+ K M ++ V P+ +T+  LI   C       A +   EMI E  
Sbjct: 420 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI-EMG 479

Query: 494 IKPS 498
           I+PS
Sbjct: 480 IRPS 480

HSP 2 Score: 73.2 bits (178), Expect = 9.9e-12
Identity = 41/174 (23.56%), Postives = 83/174 (47.70%), Query Frame = 1


Query: 174 MKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRR 233
           M+   ++  V  F+ L+  + +A            M+  G   +  + + ++  L ++  
Sbjct: 333 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392

Query: 234 AVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIV 293
             EA   F  +    EPD   YT ++  +C   ++  A+ V++ M+  G+ P+++T+S++
Sbjct: 393 KDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 452

Query: 294 IDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQ 348
           I+ LC      +A  +  EM++ G  P+ VTF  L ++ ++  R E VL+  N+
Sbjct: 453 INGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLNE 505

HSP 3 Score: 70.5 bits (171), Expect = 6.4e-11
Identity = 59/232 (25.43%), Postives = 96/232 (41.38%), Query Frame = 1


Query: 151 YNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRME 210
           Y+ M+D+  K  +   A  ++  M     + T   +S+LV  Y       EAV  F  ME
Sbjct: 275 YSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEME 334

Query: 211 DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDIS 270
             G  AD+  F+++I   CK  R          +K K   P+      ++      G+  
Sbjct: 335 RSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKD 394

Query: 271 EAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLI 330
           EA  VFR+M +    P+  TY++VI   C   ++  A  V+  M   G  P+  TF+ LI
Sbjct: 395 EAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 454

Query: 331 RVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLN 382
                   T+K   +  +M  +      +T+  L +   K++   + +K LN
Sbjct: 455 NGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLN 504

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BLAST of Csa3G874400.1 vs. Swiss-Prot
Match: PPR78_ARATH (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.9e-49
Identity = 135/460 (29.35%), Postives = 216/460 (46.96%), Query Frame = 1


Query: 84  PPCPNFTISSLSNDLSQISAPH------------SVSPAVVRYVIEKSGAVRHGIPFLPA 143
           PP P+     L N++S++ + H            + SP V   ++E+       + F PA
Sbjct: 32  PPSPD-----LVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGF-PA 91

Query: 144 LAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAW-YLIDLMKARNVEITVVTFSMLV 203
             FF WA     F HS + Y+ ++++ G  KQF L W +LI+  +    EI+   F ++ 
Sbjct: 92  HRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVF 151

Query: 204 RRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLK-HKFE 263
           R Y RA L +EA  AFNRM ++G    +     ++  LC K+    AQ FF   K     
Sbjct: 152 RAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIV 211

Query: 264 PDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDV 323
           P    Y+ LV GW R  D S A  VF EM       ++  Y+ ++DALC+SG +   + +
Sbjct: 212 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 271

Query: 324 FAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCK 383
           F EM + G  P++ +F   I  +  AG      +V ++MKR     ++ T+N +I+T CK
Sbjct: 272 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK 331

Query: 384 DDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVT 443
           ++ + +A  +L+ M +    P+  ++N I        +VN A ++ +RM    C P+  T
Sbjct: 332 NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHT 391

Query: 444 YNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELI-ALYCGMGHWNHAYMFFREM 503
           YN+++++       D   ++ + M E +  P   TY  +I  L    G    A  +F  M
Sbjct: 392 YNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 451

Query: 504 IDEKCIKPSMPLYKMVLEELRKA----GQLKKHEELVDKM 525
           IDE      +P Y   +E LR      GQ+   + L  KM
Sbjct: 452 IDE-----GIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480

[Close]

BLAST of Csa3G874400.1 vs. Swiss-Prot
Match: PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.7e-46
Identity = 97/341 (28.45%), Postives = 174/341 (51.03%), Query Frame = 1


Query: 131 ALAFFNWA-TAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSML 190
           AL FF++       + H    ++  ID+A ++      W LI  M++  +  +  TF+++
Sbjct: 73  ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIV 132

Query: 191 VRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFE 250
             RY  AG   +AV  F  M ++GC  D+ +F+ ++ +LCK +R  +A   F  L+ +F 
Sbjct: 133 AERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS 192

Query: 251 PDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDV 310
            D + Y  +++GWC      +A  V +EM   GI+PN+ TY+ ++    R+GQI  A + 
Sbjct: 193 VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 252

Query: 311 FAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCK 370
           F EM    C  + VT+  ++     AG  ++   V+++M R      + TYN +I+  CK
Sbjct: 253 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 312

Query: 371 DDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVT 430
            DN+  A+ +   M +    PN +++N + R +  + + +    +  RM+  GC+PN  T
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 372

Query: 431 YNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIA 471
           YN+++R ++     +    L ++M   +  PN +TY  LI+
Sbjct: 373 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413

HSP 2 Score: 127.1 bits (318), Expect = 5.8e-28
Identity = 74/296 (25.00%), Postives = 144/296 (48.65%), Query Frame = 1


Query: 240 FFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCR 299
           F +  +H    D+  + +++   C++  + +A  +FR ++    S +  TY+++++  C 
Sbjct: 149 FLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCL 208

Query: 300 SGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLIT 359
             +  +A +V  EM++ G NPN  T+N +++   RAG+     + + +MK+  C  D++T
Sbjct: 209 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 268

Query: 360 YNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMK 419
           Y  ++        +  A  V + M +    P+ +++N + + + K  +V  A  MF  M 
Sbjct: 269 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 328

Query: 420 EVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWN 479
             G +PN  TYN+L+R            +L + M+ E  EPNF TY  +I  Y       
Sbjct: 329 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 388

Query: 480 HAYMFFREMIDEKCIKPSMPLYKMVLEEL---RKAGQLKKHEELVDKMVERGFASR 533
            A   F +M    C+ P++  Y +++  +   +++  +    +L+ +MVERGF  R
Sbjct: 389 KALGLFEKMGSGDCL-PNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPR 442

HSP 3 Score: 115.5 bits (288), Expect = 1.7e-24
Identity = 72/296 (24.32%), Postives = 138/296 (46.62%), Query Frame = 1


Query: 233 RAVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSI 292
           +A++   F DN   ++  D   +   +    R        S+   M+   I P+  T++I
Sbjct: 72  KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131

Query: 293 VIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLR 352
           V +    +G+  +A  +F  M + GC  +  +FN ++ V  ++ R EK  +++  + R R
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGR 191

Query: 353 CAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAH 412
            + D +TYN ++   C      +A++VL  M +    PN +++N + +   ++  +  A 
Sbjct: 192 FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 251

Query: 413 RMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALY 472
             F  MK+  C+ + VTY  ++  F V         +  EM  E V P+  TY  +I + 
Sbjct: 252 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL 311

Query: 473 CGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERG 529
           C   +  +A + F EM+  +  +P++  Y +++  L  AG+  + EEL+ +M   G
Sbjct: 312 CKKDNVENAVVMFEEMV-RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365

[Close]

BLAST of Csa3G874400.1 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.0e-46
Identity = 101/377 (26.79%), Postives = 194/377 (51.46%), Query Frame = 1


Query: 158 AGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNAD 217
           +GK+KQ   A  ++D M  R+    V+T+++L+    R      A+   + M D GC  D
Sbjct: 217 SGKLKQ---AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 276

Query: 218 IIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDISEAESVFR 277
           ++ ++ +++ +CK+ R  EA  F +++     +P+VI +  ++   C  G   +AE +  
Sbjct: 277 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 336

Query: 278 EMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAG 337
           +M   G SP+V T++I+I+ LCR G + RA D+  +M   GC PNS+++N L+    +  
Sbjct: 337 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 396

Query: 338 RTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFN 397
           + ++ ++   +M    C  D++TYN ++   CKD  + +A+++LN ++   C+P   ++N
Sbjct: 397 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 456

Query: 398 PIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEE 457
            +   +AK+     A ++   M+    KP+T+TY+ L+   +     D   K   E +  
Sbjct: 457 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 516

Query: 458 EVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKK 517
            + PN  T+  ++   C     + A  F   MI+  C KP+   Y +++E L   G  K+
Sbjct: 517 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC-KPNETSYTILIEGLAYEGMAKE 576

Query: 518 HEELVDKMVERGFASRN 534
             EL++++  +G   ++
Sbjct: 577 ALELLNELCNKGLMKKS 589

HSP 2 Score: 169.5 bits (428), Expect = 1.0e-40
Identity = 103/379 (27.18%), Postives = 181/379 (47.76%), Query Frame = 1


Query: 151 YNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRME 210
           YN MI    K  +   A  ++D M   +V   VVT++ ++R    +G   +A+   +RM 
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 234

Query: 211 DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDIS 270
              C  D+I ++ +I   C+      A    D ++ +   PDV+ Y  LV+G C+ G + 
Sbjct: 235 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 294

Query: 271 EAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLI 330
           EA     +M  +G  PNV T++I++ ++C +G+   A  + A+ML  G +P+ VTFN LI
Sbjct: 295 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 354

Query: 331 RVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCT 390
               R G   + + +  +M +  C  + ++YN L+   CK+  +  AI+ L  M    C 
Sbjct: 355 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 414

Query: 391 PNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKL 450
           P+  ++N +   + K   V  A  +  ++   GC P  +TYN ++   A         KL
Sbjct: 415 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 474

Query: 451 KKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELR 510
             EM  ++++P+  TY  L+      G  + A  FF E  +   I+P+   +  ++  L 
Sbjct: 475 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-FERMGIRPNAVTFNSIMLGLC 534

Query: 511 KAGQLKKHEELVDKMVERG 529
           K+ Q  +  + +  M+ RG
Sbjct: 535 KSRQTDRAIDFLVFMINRG 549

HSP 3 Score: 162.5 bits (410), Expect = 1.2e-38
Identity = 97/340 (28.53%), Postives = 165/340 (48.53%), Query Frame = 1


Query: 190 VRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFE 249
           +R+ VR G   E       M  +G   DII  + +I   C+  +  +A    + L+    
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 250 -PDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHD 309
            PDVI Y  ++ G+C+AG+I+ A SV   M    +SP+V TY+ ++ +LC SG++ +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 228

Query: 310 VFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHC 369
           V   ML   C P+ +T+  LI    R       +++ ++M+   C  D++TYN L+   C
Sbjct: 229 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 288

Query: 370 KDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTV 429
           K+  L EAIK LN M  + C PN  + N I R +  +     A ++ A M   G  P+ V
Sbjct: 289 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 348

Query: 430 TYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREM 489
           T+NIL+              + ++M +   +PN  +Y  L+  +C     + A  +   M
Sbjct: 349 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 408

Query: 490 IDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERG 529
           +   C  P +  Y  +L  L K G+++   E+++++  +G
Sbjct: 409 VSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444

[Close]

BLAST of Csa3G874400.1 vs. TrEMBL
Match: A0A0A0LE95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G874400 PE=4 SV=1)

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI
Sbjct: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60

Query: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
           QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG
Sbjct: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120

Query: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
           AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE
Sbjct: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180

Query: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
           ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF
Sbjct: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS 300
           FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS
Sbjct: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS 300

Query: 301 GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY 360
           GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY
Sbjct: 301 GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY 360

Query: 361 NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE 420
           NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE
Sbjct: 361 NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE 420

Query: 421 VGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH 480
           VGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH
Sbjct: 421 VGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH 480

Query: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL
Sbjct: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 534

[Close]

BLAST of Csa3G874400.1 vs. TrEMBL
Match: W9RBU7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014313 PE=4 SV=1)

HSP 1 Score: 757.3 bits (1954), Expect = 1.3e-215
Identity = 371/538 (68.96%), Postives = 442/538 (82.16%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSS-LSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNA-SIPLLSPE 60
           MALIKSKL  P   SS    ++  +  FSSS   S+  L ++   D+PQ   +   LSPE
Sbjct: 1   MALIKSKLRFPNLFSSPFKLQLGLYAFFSSS---SEAHLSEEDTNDNPQTGPTSSSLSPE 60

Query: 61  QIQVSEKFHALIKEYYRRNPGPDS--TPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVI 120
           +  +++K H+LIK ++R+NP PDS  +PP PNFTI SLS D SQISA HS+SP +VR VI
Sbjct: 61  ETLIADKLHSLIKGHHRKNPSPDSNPSPPNPNFTIPSLSLDFSQISAVHSLSPGIVRRVI 120

Query: 121 EKSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKA 180
           EK G VRHGIP L ALAFFNWATA +    SP+PYNE++DLAGKV+QF LAW+++DLMK 
Sbjct: 121 EKCGGVRHGIPVLQALAFFNWATAQDRLGQSPEPYNELVDLAGKVRQFDLAWHVLDLMKT 180

Query: 181 RNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVE 240
           RNVEIT+ TFS+LVRRYVRAG AAEAVHAFNRM+DYGC  D IAFS VIS LCKKRRA E
Sbjct: 181 RNVEITIETFSILVRRYVRAGFAAEAVHAFNRMDDYGCKPDKIAFSVVISNLCKKRRATE 240

Query: 241 AQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDA 300
           AQSFFD LK KFEPDV++YT+L+HGWCRAG+ISEAESVF EMK AGI PNVYTY+IVIDA
Sbjct: 241 AQSFFDGLKDKFEPDVVLYTNLIHGWCRAGNISEAESVFSEMKKAGIKPNVYTYTIVIDA 300

Query: 301 LCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAAD 360
           LCR GQITR HDVF+EM+D GC PN+VTFNNL+RVH++AGRT+KVLQV+NQMKRL+C AD
Sbjct: 301 LCRCGQITRGHDVFSEMIDVGCQPNAVTFNNLMRVHVKAGRTQKVLQVFNQMKRLKCEAD 360

Query: 361 LITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFA 420
           +ITYNFL++ HCKD+NL +A KVLN M K  C PN+S+FNPIFR +AK +DVN AHRM+A
Sbjct: 361 VITYNFLVDCHCKDENLDDAAKVLNLMVKKGCNPNSSTFNPIFRLVAKLKDVNAAHRMYA 420

Query: 421 RMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMG 480
           +MKE+ CKPNTVTYN+LM+MFA  KS DM+ KLK+EMDE EVEPN NTYR LI ++CGMG
Sbjct: 421 KMKELKCKPNTVTYNVLMQMFAESKSMDMVLKLKEEMDESEVEPNVNTYRVLIVMFCGMG 480

Query: 481 HWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           HWN+AY FFREMI+EKC+KPS P+Y+MVLE+LRKAGQLKKHEELV+KMV RGF +R L
Sbjct: 481 HWNNAYRFFREMIEEKCLKPSFPVYEMVLEQLRKAGQLKKHEELVEKMVARGFVTRPL 535

[Close]

BLAST of Csa3G874400.1 vs. TrEMBL
Match: A0A0D2QJ21_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G191300 PE=4 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 4.1e-214
Identity = 372/536 (69.40%), Postives = 437/536 (81.53%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MAL K++   P   SS SH      S S S    +    D   T  PQ A+   LSP++ 
Sbjct: 1   MALTKARQRFP---SSFSHPFFKFYSSSVSTPPQEVEAADAETTVKPQPAA---LSPQET 60

Query: 61  QVSEKFHALIKEYYRRNPGPD--STPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEK 120
           QV+E+F +LIKE++R+NP PD  STPP PNFTI SLS D S IS  H VSP++VRYVI+K
Sbjct: 61  QVAEQFRSLIKEHHRKNPNPDLNSTPPSPNFTIPSLSLDFSNISTVHPVSPSLVRYVIDK 120

Query: 121 SGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARN 180
              VRHGIPFL  L+FFNWA A   F HSP PYNEMIDLAGK++ FGLAW+LID MKA++
Sbjct: 121 CSGVRHGIPFLQTLSFFNWAAARPDFAHSPDPYNEMIDLAGKLRHFGLAWHLIDQMKAKS 180

Query: 181 VEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQ 240
           V+I++ TF++L+RRYV+AGLAAEAVHAFNRMEDYGC  D +AFS +ISILC+KRRA EAQ
Sbjct: 181 VDISLETFAILIRRYVKAGLAAEAVHAFNRMEDYGCVPDKVAFSVLISILCRKRRADEAQ 240

Query: 241 SFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALC 300
           +FFD LK KFEPDVI+YTSL++GWCRA +ISEAE VFREMKMAGI PNVY+Y+IVIDALC
Sbjct: 241 TFFDKLKDKFEPDVILYTSLLYGWCRARNISEAERVFREMKMAGIKPNVYSYTIVIDALC 300

Query: 301 RSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLI 360
           R GQITRA+DVFAEM+D GC PNS+TFNNL+RVH++AGRTEKVLQVYNQMKRL CAAD +
Sbjct: 301 RCGQITRAYDVFAEMVDVGCEPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCAADTV 360

Query: 361 TYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARM 420
           TYNFLIE HC+DDNL EA+KVLNSM K  C PN+S+FN IF+CI K +DVN AHRM+A+M
Sbjct: 361 TYNFLIECHCRDDNLDEAVKVLNSMLKKGCIPNSSTFNTIFKCIEKLRDVNAAHRMYAKM 420

Query: 421 KEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHW 480
           KE  C PNTVTYN+LMRMFA  KSADM+ KLKKEMDE EVEPN NTYR LI +YCGMGHW
Sbjct: 421 KEYKCMPNTVTYNVLMRMFASAKSADMVLKLKKEMDENEVEPNVNTYRILITMYCGMGHW 480

Query: 481 NHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           N+AY  F+EMI+EKC+KPSMPLY+MVLE+LRKA QLKKHEELV+KMV+RGFA+R L
Sbjct: 481 NNAYKLFKEMIEEKCLKPSMPLYEMVLEQLRKAEQLKKHEELVEKMVDRGFATRPL 530

[Close]

BLAST of Csa3G874400.1 vs. TrEMBL
Match: A0A061FCT7_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_034298 PE=4 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 7.0e-214
Identity = 370/536 (69.03%), Postives = 438/536 (81.72%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MAL KSKL  P  +S LS R    + +SS+P+       ++  T+  +   I  LSPE+ 
Sbjct: 1   MALTKSKLRFPSSISPLSQRF--FKLYSSTPTSLRGDESEE--TNMSEKPKIAALSPEEA 60

Query: 61  QVSEKFHALIKEYYRRNPGPD--STPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEK 120
           +V+EKFH+LIK+++R+NP PD  S PP P+FTI SLS D S+ISA HS+SP++VR+VI+K
Sbjct: 61  EVAEKFHSLIKDHHRKNPNPDLNSAPPTPDFTIPSLSLDFSKISAVHSISPSLVRHVIDK 120

Query: 121 SGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARN 180
            G VRHGIPFL  L+FFNWAT    F  SP PYNEMIDLAGK++ F LAW+LIDLMKA+N
Sbjct: 121 CGGVRHGIPFLQTLSFFNWATTRPDFASSPDPYNEMIDLAGKLRHFDLAWHLIDLMKAKN 180

Query: 181 VEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQ 240
           V++++ TFS+L+RRYVRAGLAAEAVHAFNRMEDYGC  D IAFS VIS LCKKRRA EAQ
Sbjct: 181 VDVSIETFSILIRRYVRAGLAAEAVHAFNRMEDYGCVPDKIAFSIVISSLCKKRRAEEAQ 240

Query: 241 SFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALC 300
           +FFD LK  FEPDVI+YTSL++GWCRA +ISEAE VF+EMKMAGI PNVY+Y+IVIDALC
Sbjct: 241 TFFDKLKDNFEPDVILYTSLINGWCRARNISEAERVFKEMKMAGIKPNVYSYTIVIDALC 300

Query: 301 RSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLI 360
           R GQITRAHDVFAEM+D GC PNS+TFNNL+RVH++AGRTEKVLQVYNQMKR  C AD I
Sbjct: 301 RCGQITRAHDVFAEMIDVGCEPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRCGCPADTI 360

Query: 361 TYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARM 420
           TYNFLIE+HC+DDNL EAIKVLN M K +C PN S+FN IF+CI K QDVN AHRM+A+M
Sbjct: 361 TYNFLIESHCRDDNLDEAIKVLNLMIKKECIPNPSTFNTIFKCIEKLQDVNAAHRMYAKM 420

Query: 421 KEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHW 480
           K++ C+PNTVTYNILMRMFA  KS DM+ KLKKEMDE EVEPN NTYR LI +YCG GHW
Sbjct: 421 KDLNCRPNTVTYNILMRMFAGAKSTDMVLKLKKEMDENEVEPNVNTYRILITMYCGKGHW 480

Query: 481 NHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           N+AY FF EMI+EK +KPSM LY+MVLE+LRKA QLKKHEELV+KMV+RGF +R L
Sbjct: 481 NNAYKFFNEMIEEKGLKPSMSLYQMVLEQLRKAEQLKKHEELVEKMVDRGFVTRPL 532

[Close]

BLAST of Csa3G874400.1 vs. TrEMBL
Match: F6H0E0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00890 PE=4 SV=1)

HSP 1 Score: 741.1 bits (1912), Expect = 9.4e-211
Identity = 373/535 (69.72%), Postives = 438/535 (81.87%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNH-RSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQ 60
           MAL+KSK+ L     SLS   Q+  R +SSS   S+   ++D   +S  +A   +LS E+
Sbjct: 1   MALVKSKVRLSLLRYSLSPVSQHSFRLYSSSSEASE---EEDEVKESGNSAVNIVLSSEE 60

Query: 61  IQVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKS 120
             V EKFH+LIK + R+N  PD   P P++TI+SLS D SQIS+  SVS A+VR VIEK 
Sbjct: 61  TLVVEKFHSLIKSHQRKNTNPDPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVIEKC 120

Query: 121 GAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNV 180
           G VRHGIPF   LAFFNWAT  E F HSP+PY EMIDLAGKV+QF LAW LIDLMK RNV
Sbjct: 121 GGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNV 180

Query: 181 EITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQS 240
           EI V TF++LVRRYV+AGLAAEAVHAFNRMEDYGC  D IAFS VIS L KKRRA+EAQS
Sbjct: 181 EIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQS 240

Query: 241 FFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCR 300
           FFD+LK +FEPDV+VYTSLVHGWCRAG+ISEAE VF EMKMAGI PNVYTYSIVIDALCR
Sbjct: 241 FFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCR 300

Query: 301 SGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLIT 360
           SGQITRAHDVF+EM+D GC+PN++TFNNL+RVH++AGRTEKVLQVYNQMKRL C  D IT
Sbjct: 301 SGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT 360

Query: 361 YNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMK 420
           YNFLIE+HC+DDNL EA+K+LNS+ K  C  NASSFNPIF CI+K  DVN AHRMFA+MK
Sbjct: 361 YNFLIESHCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMK 420

Query: 421 EVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWN 480
           ++ C+PNTVTYNILMRMFA  KS DM+ KL+KEMDE E+EPN NTYR LI+ +CG+GHWN
Sbjct: 421 DLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWN 480

Query: 481 HAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           +AY FF+EMI+EKC++PS+P+Y+MVL++LRKAGQLKKHEELV+KMV RGF +R L
Sbjct: 481 NAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 531

[Close]

BLAST of Csa3G874400.1 vs. TAIR10
Match: AT1G20300.1 (AT1G20300.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 699.1 bits (1803), Expect = 2.1e-201
Identity = 346/538 (64.31%), Postives = 429/538 (79.74%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNAS--IPLLSPE 60
           MAL++SKL+L   LS +S  +    S S++  +SD    +  AT +   +    PLL+PE
Sbjct: 1   MALLRSKLHLSRTLSFISPLLPKTFSTSATSLLSDHENDESAATITAAVSVPISPLLTPE 60

Query: 61  QIQVSEKFHALIKEYYRRNP-GPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIE 120
             Q  EKFH++IK++YR+NP  P+     P+ T+ +LS D SQI     VSP+VVR VIE
Sbjct: 61  DTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQ-VSPSVVRCVIE 120

Query: 121 KSGAVRHGIPFLPALAFFNWATAGEGFEH-SPQPYNEMIDLAGKVKQFGLAWYLIDLMKA 180
           K G+VRHGIP   +LAFFNWAT+ + ++H SP PYNEMIDL+GKV+QF LAW+LIDLMK+
Sbjct: 121 KCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKS 180

Query: 181 RNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVE 240
           RNVEI++ TF++L+RRYVRAGLA+EAVH FNRMEDYGC  D IAFS VIS L +KRRA E
Sbjct: 181 RNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASE 240

Query: 241 AQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDA 300
           AQSFFD+LK +FEPDVIVYT+LV GWCRAG+ISEAE VF+EMK+AGI PNVYTYSIVIDA
Sbjct: 241 AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA 300

Query: 301 LCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAAD 360
           LCR GQI+RAHDVFA+MLD+GC PN++TFNNL+RVH++AGRTEKVLQVYNQMK+L C  D
Sbjct: 301 LCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 360

Query: 361 LITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFA 420
            ITYNFLIE HC+D+NL  A+KVLN+M K  C  NAS+FN IFR I K +DVNGAHRM++
Sbjct: 361 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 420

Query: 421 RMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMG 480
           +M E  C+PNTVTYNILMRMF   KS DM+ K+KKEMD++EVEPN NTYR L+ ++CGMG
Sbjct: 421 KMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMG 480

Query: 481 HWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           HWN+AY  F+EM++EKC+ PS+ LY+MVL +LR+AGQLKKHEELV+KM+++G  +R L
Sbjct: 481 HWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537

[Close]

BLAST of Csa3G874400.1 vs. TAIR10
Match: AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 219.5 bits (558), Expect = 4.8e-57
Identity = 119/364 (32.69%), Postives = 202/364 (55.49%), Query Frame = 1


Query: 134 FFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRY 193
           FF W+     +EHS + Y+ MI+   K++Q+ L W LI+ M+ + + + V TF +++R+Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKY 179

Query: 194 VRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVI 253
            RA    EA++AFN ME Y    +++AF+ ++S LCK +   +AQ  F+N++ +F PD  
Sbjct: 180 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK 239

Query: 254 VYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEM 313
            Y+ L+ GW +  ++ +A  VFREM  AG  P++ TYSI++D LC++G++  A  +   M
Sbjct: 240 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 299

Query: 314 LDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNL 373
             + C P +  ++ L+  +    R E+ +  + +M+R    AD+  +N LI   CK + +
Sbjct: 300 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 359

Query: 374 GEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNIL 433
               +VL  M     TPN+ S N I R + +  + + A  +F +M +V C+P+  TY ++
Sbjct: 360 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMV 419

Query: 434 MRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKC 493
           ++MF   K  +   K+ K M ++ V P+ +T+  LI   C       A +   EMI E  
Sbjct: 420 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI-EMG 479

Query: 494 IKPS 498
           I+PS
Sbjct: 480 IRPS 480

HSP 2 Score: 73.2 bits (178), Expect = 5.6e-13
Identity = 41/174 (23.56%), Postives = 83/174 (47.70%), Query Frame = 1


Query: 174 MKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRR 233
           M+   ++  V  F+ L+  + +A            M+  G   +  + + ++  L ++  
Sbjct: 333 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392

Query: 234 AVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIV 293
             EA   F  +    EPD   YT ++  +C   ++  A+ V++ M+  G+ P+++T+S++
Sbjct: 393 KDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 452

Query: 294 IDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQ 348
           I+ LC      +A  +  EM++ G  P+ VTF  L ++ ++  R E VL+  N+
Sbjct: 453 INGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLNE 505

HSP 3 Score: 70.5 bits (171), Expect = 3.6e-12
Identity = 59/232 (25.43%), Postives = 96/232 (41.38%), Query Frame = 1


Query: 151 YNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRME 210
           Y+ M+D+  K  +   A  ++  M     + T   +S+LV  Y       EAV  F  ME
Sbjct: 275 YSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEME 334

Query: 211 DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDIS 270
             G  AD+  F+++I   CK  R          +K K   P+      ++      G+  
Sbjct: 335 RSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKD 394

Query: 271 EAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLI 330
           EA  VFR+M +    P+  TY++VI   C   ++  A  V+  M   G  P+  TF+ LI
Sbjct: 395 EAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 454

Query: 331 RVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLN 382
                   T+K   +  +M  +      +T+  L +   K++   + +K LN
Sbjct: 455 NGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLN 504

[Close]

BLAST of Csa3G874400.1 vs. TAIR10
Match: AT1G52640.1 (AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 3.3e-50
Identity = 135/460 (29.35%), Postives = 216/460 (46.96%), Query Frame = 1


Query: 84  PPCPNFTISSLSNDLSQISAPH------------SVSPAVVRYVIEKSGAVRHGIPFLPA 143
           PP P+     L N++S++ + H            + SP V   ++E+       + F PA
Sbjct: 32  PPSPD-----LVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGF-PA 91

Query: 144 LAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAW-YLIDLMKARNVEITVVTFSMLV 203
             FF WA     F HS + Y+ ++++ G  KQF L W +LI+  +    EI+   F ++ 
Sbjct: 92  HRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVF 151

Query: 204 RRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLK-HKFE 263
           R Y RA L +EA  AFNRM ++G    +     ++  LC K+    AQ FF   K     
Sbjct: 152 RAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIV 211

Query: 264 PDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDV 323
           P    Y+ LV GW R  D S A  VF EM       ++  Y+ ++DALC+SG +   + +
Sbjct: 212 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 271

Query: 324 FAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCK 383
           F EM + G  P++ +F   I  +  AG      +V ++MKR     ++ T+N +I+T CK
Sbjct: 272 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK 331

Query: 384 DDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVT 443
           ++ + +A  +L+ M +    P+  ++N I        +VN A ++ +RM    C P+  T
Sbjct: 332 NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHT 391

Query: 444 YNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELI-ALYCGMGHWNHAYMFFREM 503
           YN+++++       D   ++ + M E +  P   TY  +I  L    G    A  +F  M
Sbjct: 392 YNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 451

Query: 504 IDEKCIKPSMPLYKMVLEELRKA----GQLKKHEELVDKM 525
           IDE      +P Y   +E LR      GQ+   + L  KM
Sbjct: 452 IDE-----GIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480

[Close]

BLAST of Csa3G874400.1 vs. TAIR10
Match: AT1G74900.1 (AT1G74900.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 188.7 bits (478), Expect = 9.1e-48
Identity = 104/383 (27.15%), Postives = 188/383 (49.09%), Query Frame = 1


Query: 131 ALAFFNWA-TAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSML 190
           AL FF++       + H    ++  ID+A ++      W LI  M++  +  +  TF+++
Sbjct: 73  ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIV 132

Query: 191 VRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFE 250
             RY  AG   +AV  F  M ++GC  D+ +F+ ++ +LCK +R  +A   F  L+ +F 
Sbjct: 133 AERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS 192

Query: 251 PDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDV 310
            D + Y  +++GWC      +A  V +EM   GI+PN+ TY+ ++    R+GQI  A + 
Sbjct: 193 VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 252

Query: 311 FAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCK 370
           F EM    C  + VT+  ++     AG  ++   V+++M R      + TYN +I+  CK
Sbjct: 253 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 312

Query: 371 DDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVT 430
            DN+  A+ +   M +    PN +++N + R +  + + +    +  RM+  GC+PN  T
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 372

Query: 431 YNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMI 490
           YN+++R ++     +    L ++M   +  PN +TY  LI           + MF R+  
Sbjct: 373 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI-----------SGMFVRKRS 432

Query: 491 DEKCIKPSMPLYKMVLEELRKAG 513
           ++  +  +    K +L    K+G
Sbjct: 433 EDMVVAGNQAFAKEILRLQSKSG 444

[Close]

BLAST of Csa3G874400.1 vs. TAIR10
Match: AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 186.4 bits (472), Expect = 4.5e-47
Identity = 101/377 (26.79%), Postives = 194/377 (51.46%), Query Frame = 1


Query: 158 AGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNAD 217
           +GK+KQ   A  ++D M  R+    V+T+++L+    R      A+   + M D GC  D
Sbjct: 217 SGKLKQ---AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 276

Query: 218 IIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDISEAESVFR 277
           ++ ++ +++ +CK+ R  EA  F +++     +P+VI +  ++   C  G   +AE +  
Sbjct: 277 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 336

Query: 278 EMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAG 337
           +M   G SP+V T++I+I+ LCR G + RA D+  +M   GC PNS+++N L+    +  
Sbjct: 337 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 396

Query: 338 RTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFN 397
           + ++ ++   +M    C  D++TYN ++   CKD  + +A+++LN ++   C+P   ++N
Sbjct: 397 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 456

Query: 398 PIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEE 457
            +   +AK+     A ++   M+    KP+T+TY+ L+   +     D   K   E +  
Sbjct: 457 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 516

Query: 458 EVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKK 517
            + PN  T+  ++   C     + A  F   MI+  C KP+   Y +++E L   G  K+
Sbjct: 517 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC-KPNETSYTILIEGLAYEGMAKE 576

Query: 518 HEELVDKMVERGFASRN 534
             EL++++  +G   ++
Sbjct: 577 ALELLNELCNKGLMKKS 589

HSP 2 Score: 169.5 bits (428), Expect = 5.7e-42
Identity = 103/379 (27.18%), Postives = 181/379 (47.76%), Query Frame = 1


Query: 151 YNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRME 210
           YN MI    K  +   A  ++D M   +V   VVT++ ++R    +G   +A+   +RM 
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 234

Query: 211 DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDIS 270
              C  D+I ++ +I   C+      A    D ++ +   PDV+ Y  LV+G C+ G + 
Sbjct: 235 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 294

Query: 271 EAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLI 330
           EA     +M  +G  PNV T++I++ ++C +G+   A  + A+ML  G +P+ VTFN LI
Sbjct: 295 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 354

Query: 331 RVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCT 390
               R G   + + +  +M +  C  + ++YN L+   CK+  +  AI+ L  M    C 
Sbjct: 355 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 414

Query: 391 PNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKL 450
           P+  ++N +   + K   V  A  +  ++   GC P  +TYN ++   A         KL
Sbjct: 415 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 474

Query: 451 KKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELR 510
             EM  ++++P+  TY  L+      G  + A  FF E  +   I+P+   +  ++  L 
Sbjct: 475 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-FERMGIRPNAVTFNSIMLGLC 534

Query: 511 KAGQLKKHEELVDKMVERG 529
           K+ Q  +  + +  M+ RG
Sbjct: 535 KSRQTDRAIDFLVFMINRG 549

HSP 3 Score: 162.5 bits (410), Expect = 7.0e-40
Identity = 97/340 (28.53%), Postives = 165/340 (48.53%), Query Frame = 1


Query: 190 VRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFE 249
           +R+ VR G   E       M  +G   DII  + +I   C+  +  +A    + L+    
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 250 -PDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHD 309
            PDVI Y  ++ G+C+AG+I+ A SV   M    +SP+V TY+ ++ +LC SG++ +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 228

Query: 310 VFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHC 369
           V   ML   C P+ +T+  LI    R       +++ ++M+   C  D++TYN L+   C
Sbjct: 229 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 288

Query: 370 KDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTV 429
           K+  L EAIK LN M  + C PN  + N I R +  +     A ++ A M   G  P+ V
Sbjct: 289 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 348

Query: 430 TYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREM 489
           T+NIL+              + ++M +   +PN  +Y  L+  +C     + A  +   M
Sbjct: 349 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 408

Query: 490 IDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERG 529
           +   C  P +  Y  +L  L K G+++   E+++++  +G
Sbjct: 409 VSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444

[Close]

BLAST of Csa3G874400.1 vs. NCBI nr
Match: gi|449437410|ref|XP_004136485.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucumis sativus])

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI
Sbjct: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60

Query: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
           QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG
Sbjct: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120

Query: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
           AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE
Sbjct: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180

Query: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
           ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF
Sbjct: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS 300
           FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS
Sbjct: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS 300

Query: 301 GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY 360
           GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY
Sbjct: 301 GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY 360

Query: 361 NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE 420
           NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE
Sbjct: 361 NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE 420

Query: 421 VGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH 480
           VGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH
Sbjct: 421 VGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH 480

Query: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL
Sbjct: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 534

[Close]

BLAST of Csa3G874400.1 vs. NCBI nr
Match: gi|659132921|ref|XP_008466457.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Cucumis melo])

HSP 1 Score: 996.9 bits (2576), Expect = 1.4e-287
Identity = 491/534 (91.95%), Postives = 512/534 (95.88%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MALIKSKLNLPPFLSSLSHRIQNHRSFS SPSISD PLQD+LA+DSPQN S P+LSP+QI
Sbjct: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSFSPSISDSPLQDELASDSPQNPSNPVLSPDQI 60

Query: 61  QVSEKFHALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120
           QVSEKFHALIKEYYRRNP PDSTPP PNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG
Sbjct: 61  QVSEKFHALIKEYYRRNPSPDSTPPSPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSG 120

Query: 121 AVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE 180
           AVRHGIPFLPALAFFNW TAGEGF HS QPYNEMIDLAGKV+QFGLAWYLIDLMKARNVE
Sbjct: 121 AVRHGIPFLPALAFFNWVTAGEGFVHSTQPYNEMIDLAGKVRQFGLAWYLIDLMKARNVE 180

Query: 181 ITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSF 240
           ITV TFS+LVRRYVRAGLAAEAVHAFNRME+YGC AD +AFS VISILCKKRRAVEAQSF
Sbjct: 181 ITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGCTADTVAFSIVISILCKKRRAVEAQSF 240

Query: 241 FDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS 300
           FDNLKHKFEPDV+VYTSLVHGWCRAGDISEAE VF+EMKMAGISPNVYTYSIVIDALCRS
Sbjct: 241 FDNLKHKFEPDVVVYTSLVHGWCRAGDISEAERVFKEMKMAGISPNVYTYSIVIDALCRS 300

Query: 301 GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY 360
           GQITRAHDVFAEML+AGCNPNSVTFNNLIRVH+RAGRTEKVLQVYNQM+RLRCAADLITY
Sbjct: 301 GQITRAHDVFAEMLNAGCNPNSVTFNNLIRVHVRAGRTEKVLQVYNQMRRLRCAADLITY 360

Query: 361 NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE 420
           NFLIETHCKD+NLGEAIKVLNSM KN CTP+ASSFNPIFRCIAKSQDVNGAHRMFARMK+
Sbjct: 361 NFLIETHCKDENLGEAIKVLNSMIKNGCTPDASSFNPIFRCIAKSQDVNGAHRMFARMKD 420

Query: 421 VGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH 480
           VGCKPNT TYNILMRMFAVPKSADMIFKLKKEMDEEEVEPN NTYRELI LYCGMGHWN+
Sbjct: 421 VGCKPNTATYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNVNTYRELITLYCGMGHWNN 480

Query: 481 AYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           AY FFREMI+EK +KPSM LYKMVLE+LR+AGQLKKHEELVDKMVERGFASRNL
Sbjct: 481 AYKFFREMIEEKNLKPSMSLYKMVLEQLREAGQLKKHEELVDKMVERGFASRNL 534

[Close]

BLAST of Csa3G874400.1 vs. NCBI nr
Match: gi|1009109006|ref|XP_015887760.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 781.9 bits (2018), Expect = 6.9e-223
Identity = 385/536 (71.83%), Postives = 451/536 (84.14%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQI 60
           MAL+KSKL    FLSSLS        FSS+  + D P +D    D+P+NA    LS E+ 
Sbjct: 1   MALVKSKLLFSRFLSSLSQSKLKLHYFSSASQV-DLPEED--TNDNPKNAPNTSLSTEET 60

Query: 61  QVSEKFHALIKEYYRRNP--GPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEK 120
            +++K HALIK+++R+NP   P+  PP P FTI +LS D SQI+A HS+S  +VR VIEK
Sbjct: 61  LIADKLHALIKDHHRKNPQPNPNPCPPSPTFTIPALSLDFSQITADHSISSGIVRRVIEK 120

Query: 121 SGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARN 180
              VRHGIP L ALAFFNWATA +GF+HSP+PYNEMIDLAGK++QF LAW+LIDLMKARN
Sbjct: 121 CHGVRHGIPVLQALAFFNWATARDGFDHSPEPYNEMIDLAGKIRQFDLAWHLIDLMKARN 180

Query: 181 VEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQ 240
           VEITV TFS+LVRRY RAGLAAEAVHAFNRMEDY C  D IAFS VIS+LCKKRRA EAQ
Sbjct: 181 VEITVETFSILVRRYARAGLAAEAVHAFNRMEDYDCKPDKIAFSIVISVLCKKRRASEAQ 240

Query: 241 SFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALC 300
           SFFD+LKHKFEPDVI+YTSLVHGWCRAG+ISEAE VFREMK AGI PNVYTYSIVIDALC
Sbjct: 241 SFFDSLKHKFEPDVILYTSLVHGWCRAGNISEAERVFREMKAAGIKPNVYTYSIVIDALC 300

Query: 301 RSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLI 360
           R GQITRAHDVF+EM+DAGC+PNS+TFNNL+RVH++AGRT KVLQVYNQMKRL+C AD I
Sbjct: 301 RCGQITRAHDVFSEMIDAGCSPNSITFNNLMRVHVKAGRTTKVLQVYNQMKRLKCPADTI 360

Query: 361 TYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARM 420
           TYNFLIE HCKD+NL EA+KVLN+MA N C+PNA++FNPIFR IAK +DVNGAHRM+A+M
Sbjct: 361 TYNFLIECHCKDENLDEAVKVLNTMAANGCSPNAATFNPIFRGIAKLKDVNGAHRMYAKM 420

Query: 421 KEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHW 480
           K++ C+ NTVTYNILM+MFA  KS DM+ KLKKEMDE E+EPN NTYR LI +YCGMGHW
Sbjct: 421 KDLKCRANTVTYNILMQMFAESKSTDMVLKLKKEMDENEIEPNVNTYRVLIVMYCGMGHW 480

Query: 481 NHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           N+AY FFR+MI+EKC+KPS+ +Y+MVL++LR+AGQLKKHEELV+KMV+RGF SR L
Sbjct: 481 NNAYKFFRDMIEEKCLKPSLSVYEMVLKQLREAGQLKKHEELVEKMVDRGFVSRPL 533

[Close]

BLAST of Csa3G874400.1 vs. NCBI nr
Match: gi|470113439|ref|XP_004292931.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 773.1 bits (1995), Expect = 3.2e-220
Identity = 383/535 (71.59%), Postives = 450/535 (84.11%), Query Frame = 1


Query: 2   ALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDSPQNASIPLLSPEQIQ 61
           AL KS L L  FLS LS R+ N  SFSS+P   +P LQD+   D+ Q A       E+  
Sbjct: 3   ALTKSNLPLRRFLSPLSQRLLNPSSFSSAP---EPHLQDE--NDTSQTAPT-----EETL 62

Query: 62  VSEKFHALIKEYYRRNPGPDSTP--PCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKS 121
           +++ FH+LIK+++R NP P+  P  P P +TI SLS+D SQ+SA  SVSPAVVR V+EK 
Sbjct: 63  IADTFHSLIKDHHRNNPNPNPNPAPPNPTYTIPSLSSDFSQLSAAGSVSPAVVRRVLEKC 122

Query: 122 GAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNV 181
           GAVRHGIP L A+AFFNWAT+ EGFEH+P+PYNEM+DLAGKV+QF LAW++IDLMKARNV
Sbjct: 123 GAVRHGIPVLQAVAFFNWATSREGFEHNPEPYNEMVDLAGKVRQFDLAWHVIDLMKARNV 182

Query: 182 EITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQS 241
           EITV TFS+LVRRYVRAGLAAEAVHAFNRME+YG + D IAFS VI ILCKKRRA EAQ+
Sbjct: 183 EITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGVSPDRIAFSVVIGILCKKRRASEAQA 242

Query: 242 FFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCR 301
           FFD+LKHKFE DVI+YTSLV+GWCRAG+I+EAE VF EMK AGI PNVY+YSIVIDALCR
Sbjct: 243 FFDSLKHKFEADVILYTSLVNGWCRAGNIAEAERVFNEMKAAGIEPNVYSYSIVIDALCR 302

Query: 302 SGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLIT 361
            GQITRAHDVFAEM+DAGCNPNS+TFNNL+RVH++AGRTEKVLQVYNQMKRL C AD+IT
Sbjct: 303 CGQITRAHDVFAEMIDAGCNPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCNADVIT 362

Query: 362 YNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMK 421
           YNFLIE HCKD+N+ EA KVLN M K  C+PNAS+FNPIFRCIAK +DVNGAHRM+ +MK
Sbjct: 363 YNFLIECHCKDENVEEAAKVLNLMVKKGCSPNASTFNPIFRCIAKLKDVNGAHRMYTKMK 422

Query: 422 EVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWN 481
           ++ CK NTVTYN+LM+MFA  KS DM+ KLKKEMDE EVEPN NTY+ LI++YC MGHWN
Sbjct: 423 DLDCKANTVTYNVLMQMFAESKSTDMVLKLKKEMDENEVEPNVNTYKVLISMYCAMGHWN 482

Query: 482 HAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           +AY FFREMI+EKC+KPSMP+Y+MVL++LR AGQLKKHEELV+KMV+RGF +R L
Sbjct: 483 NAYKFFREMIEEKCLKPSMPVYEMVLKQLRNAGQLKKHEELVEKMVDRGFVTRPL 527

[Close]

BLAST of Csa3G874400.1 vs. NCBI nr
Match: gi|657991357|ref|XP_008387903.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Malus domestica])

HSP 1 Score: 767.3 bits (1980), Expect = 1.8e-218
Identity = 381/539 (70.69%), Postives = 447/539 (82.93%), Query Frame = 1


Query: 1   MALIKSKLNLPPFLSSLSHRIQNHRSFSSSPSISDPPLQDDLATDS---PQNASIPLLSP 60
           MAL KS L+   FLS    RI    SFS +   S+ PLQ++   D+   P  A  P LS 
Sbjct: 1   MALTKSTLHFRRFLSPTPPRILKPYSFSLA---SEAPLQENDTPDNDSQPAPAPAPYLSA 60

Query: 61  EQIQVSEKFHALIKEYYRRNPGPDS--TPPCPNFTISSLSNDLSQISAPHSVSPAVVRYV 120
           ++  +++KFH+LIK+++R NP P+   TPP P FTI +LS D SQISA HS+SP+VVR V
Sbjct: 61  DETLIADKFHSLIKDHHRNNPNPNPNPTPPNPTFTIPALSQDFSQISAVHSLSPSVVRRV 120

Query: 121 IEKSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMK 180
           IEK G VRHGIP + A+AFFNWATA +GFE   +PYNEM+DLAGKV+QF LAW++IDLMK
Sbjct: 121 IEKCGGVRHGIPLVQAVAFFNWATARDGFEQKSEPYNEMVDLAGKVRQFDLAWHVIDLMK 180

Query: 181 ARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAV 240
           ARNVEITV TFS+LVRRYVRAGLAAEAVHAFNRME+YGC  D +AFS VI ILCKKRRA 
Sbjct: 181 ARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGCEPDRMAFSVVIGILCKKRRAS 240

Query: 241 EAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVID 300
           EAQSFFD+LKHKFE DV++YTSLV+GWCRAG+ISEAE VFR+MK AGI PNVYTYSIVID
Sbjct: 241 EAQSFFDSLKHKFEVDVVLYTSLVNGWCRAGNISEAERVFRDMKAAGIMPNVYTYSIVID 300

Query: 301 ALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAA 360
            LCR GQITRAHDVFAEM+DAGC PNS+TFNNL+RVH++AGRTEKVLQVYNQMKRL C A
Sbjct: 301 GLCRCGQITRAHDVFAEMIDAGCQPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCNA 360

Query: 361 DLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMF 420
           D ITYNFLIE HCKD+NL +A+KVL+ M K  CTPNASSFNPIFRCIA  +DVNGAHRM+
Sbjct: 361 DAITYNFLIECHCKDENLEDAVKVLDLMVKKGCTPNASSFNPIFRCIATLKDVNGAHRMY 420

Query: 421 ARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGM 480
           A+MKE+ C+ NTVTYNILM+MFA  KS  M+ KLK+EMDE EVEPN NTY+ LI++YCGM
Sbjct: 421 AKMKELKCELNTVTYNILMQMFAESKSTHMVLKLKREMDENEVEPNVNTYKVLISMYCGM 480

Query: 481 GHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 535
           GHWN+AY + REMI+EKC+KPSMP+Y+MVLE+LRKAGQLKKHEELV+KMV+RGF +R L
Sbjct: 481 GHWNNAYRYCREMIEEKCLKPSMPVYEMVLEQLRKAGQLKKHEELVEKMVDRGFVTRPL 536

The following BLAST results are available for this feature:

BLAST of Csa3G874400.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPR54_ARATH	3.7e-200	64.31	Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop...	[more]
PP129_ARATH	8.6e-56	32.69	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]
PPR78_ARATH	5.9e-49	29.35	Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop...	[more]
PP125_ARATH	4.7e-46	28.45	Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop...	[more]
PPR28_ARATH	8.0e-46	26.79	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN...	[more]

BLAST of Csa3G874400.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE95_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G874400 PE=4 SV=1	[more]
W9RBU7_9ROSA	1.3e-215	68.96	Uncharacterized protein OS=Morus notabilis GN=L484_014313 PE=4 SV=1	[more]
A0A0D2QJ21_GOSRA	4.1e-214	69.40	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G191300 PE=4 SV=1	[more]
A0A061FCT7_THECC	7.0e-214	69.03	Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_034...	[more]
F6H0E0_VITVI	9.4e-211	69.72	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00890 PE=4 SV=...	[more]

BLAST of Csa3G874400.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20300.1	2.1e-201	64.31	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G77360.1	4.8e-57	32.69	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G52640.1	3.3e-50	29.35	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G74900.1	9.1e-48	27.15	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	4.5e-47	26.79	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

BLAST of Csa3G874400.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437410\|ref\|XP_004136485.1\|	0.0e+00	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial ...	[more]
gi\|659132921\|ref\|XP_008466457.1\|	1.4e-287	91.95	PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial ...	[more]
gi\|1009109006\|ref\|XP_015887760.1\|	6.9e-223	71.83	PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial ...	[more]
gi\|470113439\|ref\|XP_004292931.1\|	3.2e-220	71.59	PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial ...	[more]
gi\|657991357\|ref\|XP_008387903.1\|	1.8e-218	70.69	PREDICTED: pentatricopeptide repeat-containing protein At1g20300, mitochondrial ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa3G874400	Csa3G874400	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa3G874400.1	Csa3G874400.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G874400.1.utr5p1	Csa3G874400.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G874400.1.cds1	Csa3G874400.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G874400.1.utr3p1	Csa3G874400.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 320..369 score: 6.0E-13coord: 250..299 score: 1.0E-18coord: 394..438 score: 1.
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 171..228 score: 2.4E-4coord: 448..505 score: 4.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 184..217 score: 2.5E-5coord: 288..321 score: 2.2E-10coord: 323..356 score: 1.9E-7coord: 358..392 score: 7.9E-7coord: 253..287 score: 2.6E-10coord: 151..182 score: 0.0024coord: 464..493 score: 2.5E-4coord: 394..427 score: 8.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 251..285 score: 13.778coord: 147..181 score: 7.377coord: 321..355 score: 10.698coord: 356..390 score: 11.137coord: 497..531 score: 8.079coord: 391..425 score: 10.326coord: 217..247 score: 7.596coord: 286..320 score: 13.208coord: 426..460 score: 9.065coord: 182..216 score: 9.843coord: 461..495 score: 9
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 191..489 score: 1.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 217..386 score: 3.2
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 28..89 score: 1.0E-176coord: 121..532 score: 1.0E
None	No IPR available	PANTHER	PTHR24015:SF408	SUBFAMILY NOT NAMED	coord: 28..89 score: 1.0E-176coord: 121..532 score: 1.0E