Csa3G851740.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa3G851740.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 35131588 .. 35131776 (-)
Sequence length189
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCAGTGGGATGATTCAAGCACTCGACCTTTCGAGAGGGAGAAAGTGGGTCGAGGTTTAGGATCTTCAGTAGCTCTTGCTTTCCCTGGGGAAGGTCTGAGATCGGATCCTTCATTCATTCCTGACGAAGAAGATTTACTTGGATTCTCACCTTCCCGCACCTTCTTTCTACAGTTCAAGGGCTAG

mRNA sequence

ATGTCCCAGTGGGATGATTCAAGCACTCGACCTTTCGAGAGGGAGAAAGTGGGTCGAGGTTTAGGATCTTCAGTAGCTCTTGCTTTCCCTGGGGAAGGTCTGAGATCGGATCCTTCATTCATTCCTGACGAAGAAGATTTACTTGGATTCTCACCTTCCCGCACCTTCTTTCTACAGTTCAAGGGCTAG

Coding sequence (CDS)

ATGTCCCAGTGGGATGATTCAAGCACTCGACCTTTCGAGAGGGAGAAAGTGGGTCGAGGTTTAGGATCTTCAGTAGCTCTTGCTTTCCCTGGGGAAGGTCTGAGATCGGATCCTTCATTCATTCCTGACGAAGAAGATTTACTTGGATTCTCACCTTCCCGCACCTTCTTTCTACAGTTCAAGGGCTAG

Protein sequence

MSQWDDSSTRPFEREKVGRGLGSSVALAFPGEGLRSDPSFIPDEEDLLGFSPSRTFFLQFKG*
Homology
[Close]
BLAST of Csa3G851740.1 vs. TrEMBL
Match: A0A0A0LDK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851740 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MSQWDDSSTRPFEREKVGRGLGSSVALAFPGEGLRSDPSFIPDEEDLLGFSPSRTFFLQF 60
          MSQWDDSSTRPFEREKVGRGLGSSVALAFPGEGLRSDPSFIPDEEDLLGFSPSRTFFLQF
Sbjct: 1  MSQWDDSSTRPFEREKVGRGLGSSVALAFPGEGLRSDPSFIPDEEDLLGFSPSRTFFLQF 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

[Close]
BLAST of Csa3G851740.1 vs. NCBI nr
Match: gi|700204740|gb|KGN59873.1| (hypothetical protein Csa_3G851740 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MSQWDDSSTRPFEREKVGRGLGSSVALAFPGEGLRSDPSFIPDEEDLLGFSPSRTFFLQF 60
          MSQWDDSSTRPFEREKVGRGLGSSVALAFPGEGLRSDPSFIPDEEDLLGFSPSRTFFLQF
Sbjct: 1  MSQWDDSSTRPFEREKVGRGLGSSVALAFPGEGLRSDPSFIPDEEDLLGFSPSRTFFLQF 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

The following BLAST results are available for this feature:
BLAST of Csa3G851740.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDK6_CUCSA1.2e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851740 PE=4 SV=1[more]
BLAST of Csa3G851740.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204740|gb|KGN59873.1|1.7e-27100.00hypothetical protein Csa_3G851740 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa3G851740Csa3G851740gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa3G851740.1Csa3G851740.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa3G851740.1.cds1Csa3G851740.1.cds1CDS