Csa3G824860.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa3G824860.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 32589309 .. 32589528 (-)
Sequence length192
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTTTTGTTGCTATTGCACTTTGAAGATGAACTAGACATTCACGCGGAAGCGGACGCGGACCCTGAGGCCATCGAGATTCAAACTCCCGATGGGGCCATTGAGTCTGACGTGCCTTCTTCTTTTAGACAGATACTGTTATTACTCAGTATCTCCTTTTGGTTCACACCCACCCTTCTCATTGTCTTCTTCTTCTCCTTCTATCACCTCTTCTTAA

mRNA sequence

ATGGGATTTTTGTTGCTATTGCACTTTGAAGATGAACTAGACATTCACGCGGAAGCGGACGCGGACCCTGAGGCCATCGAGATTCAAACTCCCGATGGGGCCATTGAATACTGTTATTACTCAGTATCTCCTTTTGGTTCACACCCACCCTTCTCATTGTCTTCTTCTTCTCCTTCTATCACCTCTTCTTAA

Coding sequence (CDS)

ATGGGATTTTTGTTGCTATTGCACTTTGAAGATGAACTAGACATTCACGCGGAAGCGGACGCGGACCCTGAGGCCATCGAGATTCAAACTCCCGATGGGGCCATTGAATACTGTTATTACTCAGTATCTCCTTTTGGTTCACACCCACCCTTCTCATTGTCTTCTTCTTCTCCTTCTATCACCTCTTCTTAA

Protein sequence

MGFLLLLHFEDELDIHAEADADPEAIEIQTPDGAIEYCYYSVSPFGSHPPFSLSSSSPSITSS*
Homology
[Close]
BLAST of Csa3G824860.1 vs. TrEMBL
Match: A0A0A0LHP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824860 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.1e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MGFLLLLHFEDELDIHAEADADPEAIEIQTPDGAIEYCYYSVSPFGSHPPFSLSSSSPSI 60
          MGFLLLLHFEDELDIHAEADADPEAIEIQTPDGAIEYCYYSVSPFGSHPPFSLSSSSPSI
Sbjct: 1  MGFLLLLHFEDELDIHAEADADPEAIEIQTPDGAIEYCYYSVSPFGSHPPFSLSSSSPSI 60

Query: 61 TSS 64
          TSS
Sbjct: 61 TSS 63

[Close]
BLAST of Csa3G824860.1 vs. NCBI nr
Match: gi|700204408|gb|KGN59541.1| (hypothetical protein Csa_3G824860 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 4.5e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MGFLLLLHFEDELDIHAEADADPEAIEIQTPDGAIEYCYYSVSPFGSHPPFSLSSSSPSI 60
          MGFLLLLHFEDELDIHAEADADPEAIEIQTPDGAIEYCYYSVSPFGSHPPFSLSSSSPSI
Sbjct: 1  MGFLLLLHFEDELDIHAEADADPEAIEIQTPDGAIEYCYYSVSPFGSHPPFSLSSSSPSI 60

Query: 61 TSS 64
          TSS
Sbjct: 61 TSS 63

The following BLAST results are available for this feature:
BLAST of Csa3G824860.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHP5_CUCSA3.1e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824860 PE=4 SV=1[more]
BLAST of Csa3G824860.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204408|gb|KGN59541.1|4.5e-28100.00hypothetical protein Csa_3G824860 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa3G824860Csa3G824860gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa3G824860.1Csa3G824860.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa3G824860.1.cds2Csa3G824860.1.cds2CDS
Csa3G824860.1.cds1Csa3G824860.1.cds1CDS