Csa3G345890.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACAAAGATCGACGGAATCGAAGATGAAGAAATTTCAAAGCTTGAAGAAGGCATTGTCGTTTCCGCCGTTGCTCGTTTCTGTCCCTCCAATTTAGTCGTCATCATCCAAAAGGTACCACTCTTCAACTTCAATCCTCTCTGTTCTTCTGCTCTTCTGCTCATCAATCACTCGAGTGTATGAAATGCTTTTGGAGAATGCGGACATTAATTAATCAATCGACTGTGTAAAAGATTGTTTGTTTCTCTGTAAAATCTTGTAAATGAATCAATCGACATTCAATAACTTGTTTGGTACTGTATAATCTGCTTCATGAATCAATCAATCAACTCTGTATAAAACGTTTGTTTCTCTGGAAAATCTGGCTAATGTACGAATCCACTGTGTAGGATTTGCTTGTTTCTCATGAAAATCAGGCTTATGTATCAGTCGACTGGATAGAAATTGATTGTTTCCCTGGAAATTTTGGCTTATGTATCAATCGATTGTATAGAACTTGTTTGTTTACGTGGAAATTGAGAGGCATGAATATGATGAATGGAGTGTATAACATGTGTTTGGTTGTGGGGAAATTTTGTGGCAGGTAATCGCGGAGTTGATCGGGACGTACTTCGTGATCTTCGGGGGATGTGGGGCGGTGGTGGTGAACAAAATATACGGATCAGTGACATTTCCGGGAATCTGTGTGGTTTGGGGATTGATTGTAATGGTAATGGTGTATTCGGTGGGACATGTCTCTGGAGCGCATTTCAACCCTGCTGTTACTCTCACATTCGCCCTTTTTCGTCGCTTCCCCTTCTGGCAGGTCTCTCTCTTCTTCACACTTCACACTTCTTTTTCACTTTCTTTCTATTGCAAACCGATAGTGAGAACTCGAACCTCTAGGATCCATCTTTGAGAGGTACACACCATGGTTTTTAAGTTATATCACTGAGTCCGAGTAAAGAGTGGGGTTGTGAAGAAGTTAACAAAAATTAATGTTGTTTTTTAGCCTCAAGGTCTAAGAATTCCTTTATCAGAGTGGAGTCTTCTAATACACTTCTTATATGGTTACTTCCAAGAGAATTTTATTGGCAAGAGATTGGGGGTATCTTAGTTTTACCGATTTACGAATAGTTATAAACTTTGAGGAAAGAATAACTCGGGAAAAAAGGATTATGATAATCTCAGTCTTGTGATAATATGTGTTTGGGGTTAGAGTTATTATTGTTAGTGTTATGATAATGTGTTTGGGATAAGGAATATGAATTATAGTGTTATGATAATATGTGTTTGAAAGAATAATTATTATTGTAGTATTATGATAATATTAGTTTGAGGGAAGGGTTATAATTATAATTGTAGTGTTATTATAAATTGTGTTAGGAGGAAGAGTTATGAGTGTAATATTATGATAAGATGAAGTAGGAAAACTTTTAGAGTTATTTGAGTATGAAGTAGGAAAATTTGTATTGTTATTTAACCTTAATCCCAAAAATACAAACCCTTACACCCAAACAATGGTTGGGTCATAACTCCTTTCCTAATCCCCTAAATCCCCACCCCAAACACACCTCTTGAAGTTAAAATGCTATTATATTGATGTTTTTAGTGGTCTGACCCATAAACTATTTAGACCAAACAAGGATTGGAAGCCAAGAATCATACGGCTAAGTAGCTCATTATACTACACAATATACCAAAATTCTAGATATCTTCTAGTCGTTTGATATTTTGATATTAACCCCCAAACTAAAGCTTTTGTTAAACTCACGTCCTTCCTCCACTCTCAAATTAGGTAATACAAACCTTAGTACTAAAAATATAAAAGTAACTTAAGTTAACGCACTCAAAACTTAGAGTGTTTCTTACTAAGATTATTTGAAACCAAAGTCAAATTTCTTTTACAGTGCTTCAAGTTCATCACTTCCTTCGACTCTCATGATGTAGGACAATCACTCTTATAATATTTTGTTATTTAAGGATCTCAAATTGAAAAAGTCGAAAGAATTCATAATGTTTACGATGTTTACATGATATAGAAGTTAGCATGATGATTTTGTGATTGGAATCCAATTCTTAAATATGGTATTAGAATTTCAAGCCTAATTGAGCATTCCGTACAAAATAAATACATCTTTGTTTACGGTCAATCAATTTTATAATAAAATATCATAATTATCTAGTCCAGACGGTTTGGTTGTTCATTGATTCAAGTGGAACATTAATTGTTTTGAACATGTAGACAGTTGGGTTCCCATTGTATATGTTTAACCCCTATTGAATGGACTAAGAAACAGACTAGTCGGAGCACAAAACAAAAACATGGTCTCCTACAATATTTCAGTAGAATTGGTAACCTAACAGAATGATAATGAGATATATGTGTAATGAAATGGTTTGCGTAGGTACCAATATACACAGGAGCTCAACTAATGGGGTCCCTTCTCGCAAGCTGCACATTGGATCTAATGTTTGAAGTGACCCCAGAAGCCTTCTTTGGGACAGTGCCCGTTGGATCCAATGTTCAATCTTTGGTTATTGAAATTATCATCACATTTCTCTTGATGTTTGTCATCTCTGGCGTCTCCACTGATAACAGAGCCGTATGTCATCTAAACGCCACTTAAGATTTTTTTTTTTTGTGTTTATCTAAACTTTTAAATGATTGGGCATGCTGTGAAAATAGTGAGCAACTCCTAAAAAAACTCCCCATGTACATGTCATCTTGATAATTGATACACTGAAACACGCTTGATACAATTGATCTTTCCTACACTAAAAACTGTTCAAAATATATATGAATACGTATTACATATTTTAAATATCTTAATTCTTAAATTGTCATCCACATTTACCATATAAACAGTAGTAAACATCTTTTTTTATTTTAACAGGTAGGAGAATTAGGTGGAGTTATGGTTGGAATGACCATTCTCTTGAATGTTTTCGTCGCCGGGTAACTCTACATTACATTTTACCAATTTTAGTTTATGTCTTTTGAGAAATATAAATAACTAAAAAAGAAATTATCATAAATAGCAAAAAGAAAAAAAAAAATGAAACTCTTTATAAAATATAGTAAAAGAATACTCAAATACAATTTAATGGATTTGCTGTTGTAGGTAAATAGTTTCAATTTACTTGCTATATTTCAAATTTTTTCAAAATTAAAATACAAAAAAAATTTAAAAATTAATCTTAAATTATAATTCAATTTAGGACAATAATACATATTTTCATGTAGCCTAGGTCGAAAAAAAAAAAAAACTTGCCATCTGGATATAAATTAAGATGTTATTTTTAAAAAAACTAAAATTAAAATATTATTTTAACGTTTTTTTGGAACATTTTAAAATATAGTAAAATAAATTATGAATGATACAAAATCTCTATATATTGTAAATATTTGGTGAAATATGTTATTTATTATAATTTTTCTAATATTTTTTAAAGTTGATTCAATTTTAAAAAGAAAATAAAAACAAATATTTATAGAAATGGAAATTAGATTGGGTAAAAGTTAAGAGTACATAAACAGAAACGAAAGTAGAGGTAATCAAAATGTAGGATATGCATAGACCAAAATGATAGTTAAACATAATTTGAAATAATTAATGGTAGGCCGATTTCGGGAGCTTCTATGAATCCAGCTAGGAGCCTTGGACCAGCAATAGTGAAACGGCAGTTTAAAGGATTATGGGTTTACATGTTAGGACCCTTGATCGGAGCGGTCGCCGGCGGATTTGTCTATAACCTCATGAGATACACAGACAAGTCGTTACGGGAGATCACCAGAAGCACCTCATTCCTCACCGGCACCCACAAATCATAACCGCCCGCCCGATATTTAAAAAAGCTTGTGAACCAGTAGTATTCTTTAATCATTCATTTATGTATATAATTTGTTCTCTCCATCAATTGTCTTTCTTTTAGAATTTTTTTACCATTTACCCAAACCGTTAATTATTTGATCATATGATGCTTTTTT ATGGCCACAAAGATCGACGGAATCGAAGATGAAGAAATTTCAAAGCTTGAAGAAGGCATTGTCGTTTCCGCCGTTGCTCGTTTCTGTCCCTCCAATTTAGTCGTCATCATCCAAAAGGTAATCGCGGAGTTGATCGGGACGTACTTCGTGATCTTCGGGGGATGTGGGGCGGTGGTGGTGAACAAAATATACGGATCAGTGACATTTCCGGGAATCTGTGTGGTTTGGGGATTGATTGTAATGGTAATGGTGTATTCGGTGGGACATGTCTCTGGAGCGCATTTCAACCCTGCTGTTACTCTCACATTCGCCCTTTTTCGTCGCTTCCCCTTCTGGCAGGTACCAATATACACAGGAGCTCAACTAATGGGGTCCCTTCTCGCAAGCTGCACATTGGATCTAATGTTTGAAGTGACCCCAGAAGCCTTCTTTGGGACAGTGCCCGTTGGATCCAATGTTCAATCTTTGGTTATTGAAATTATCATCACATTTCTCTTGATGTTTGTCATCTCTGGCGTCTCCACTGATAACAGAGCCGTAGGAGAATTAGGTGGAGTTATGGTTGGAATGACCATTCTCTTGAATGTTTTCGTCGCCGGGCCGATTTCGGGAGCTTCTATGAATCCAGCTAGGAGCCTTGGACCAGCAATAGTGAAACGGCAGTTTAAAGGATTATGGGTTTACATGTTAGGACCCTTGATCGGAGCGGTCGCCGGCGGATTTGTCTATAACCTCATGAGATACACAGACAAGTCGTTACGGGAGATCACCAGAAGCACCTCATTCCTCACCGGCACCCACAAATCATAA ATGGCCACAAAGATCGACGGAATCGAAGATGAAGAAATTTCAAAGCTTGAAGAAGGCATTGTCGTTTCCGCCGTTGCTCGTTTCTGTCCCTCCAATTTAGTCGTCATCATCCAAAAGGTAATCGCGGAGTTGATCGGGACGTACTTCGTGATCTTCGGGGGATGTGGGGCGGTGGTGGTGAACAAAATATACGGATCAGTGACATTTCCGGGAATCTGTGTGGTTTGGGGATTGATTGTAATGGTAATGGTGTATTCGGTGGGACATGTCTCTGGAGCGCATTTCAACCCTGCTGTTACTCTCACATTCGCCCTTTTTCGTCGCTTCCCCTTCTGGCAGGTACCAATATACACAGGAGCTCAACTAATGGGGTCCCTTCTCGCAAGCTGCACATTGGATCTAATGTTTGAAGTGACCCCAGAAGCCTTCTTTGGGACAGTGCCCGTTGGATCCAATGTTCAATCTTTGGTTATTGAAATTATCATCACATTTCTCTTGATGTTTGTCATCTCTGGCGTCTCCACTGATAACAGAGCCGTAGGAGAATTAGGTGGAGTTATGGTTGGAATGACCATTCTCTTGAATGTTTTCGTCGCCGGGCCGATTTCGGGAGCTTCTATGAATCCAGCTAGGAGCCTTGGACCAGCAATAGTGAAACGGCAGTTTAAAGGATTATGGGTTTACATGTTAGGACCCTTGATCGGAGCGGTCGCCGGCGGATTTGTCTATAACCTCATGAGATACACAGACAAGTCGTTACGGGAGATCACCAGAAGCACCTCATTCCTCACCGGCACCCACAAATCATAA MATKIDGIEDEEISKLEEGIVVSAVARFCPSNLVVIIQKVIAELIGTYFVIFGGCGAVVVNKIYGSVTFPGICVVWGLIVMVMVYSVGHVSGAHFNPAVTLTFALFRRFPFWQVPIYTGAQLMGSLLASCTLDLMFEVTPEAFFGTVPVGSNVQSLVIEIIITFLLMFVISGVSTDNRAVGELGGVMVGMTILLNVFVAGPISGASMNPARSLGPAIVKRQFKGLWVYMLGPLIGAVAGGFVYNLMRYTDKSLREITRSTSFLTGTHKS*
BLAST of Csa3G345890.1 vs. Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 1.8e-102 Identity = 188/266 (70.68%), Postives = 225/266 (84.59%), Query Frame = 1
BLAST of Csa3G345890.1 vs. Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2) HSP 1 Score: 366.3 bits (939), Expect = 2.9e-100 Identity = 182/269 (67.66%), Postives = 220/269 (81.78%), Query Frame = 1
BLAST of Csa3G345890.1 vs. Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=3 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 4.1e-99 Identity = 180/276 (65.22%), Postives = 222/276 (80.43%), Query Frame = 1
BLAST of Csa3G345890.1 vs. Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.2e-84 Identity = 158/256 (61.72%), Postives = 196/256 (76.56%), Query Frame = 1
BLAST of Csa3G345890.1 vs. Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 4.9e-84 Identity = 152/236 (64.41%), Postives = 189/236 (80.08%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TrEMBL
Match: A0A0A0LA39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G345890 PE=3 SV=1) HSP 1 Score: 530.0 bits (1364), Expect = 1.7e-147 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TrEMBL
Match: A0A061EGH1_THECC (NOD26-like intrinsic protein 4,1 OS=Theobroma cacao GN=TCM_019213 PE=3 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.3e-104 Identity = 188/264 (71.21%), Postives = 223/264 (84.47%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TrEMBL
Match: A0A022S037_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011367mg PE=3 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 6.8e-101 Identity = 186/275 (67.64%), Postives = 232/275 (84.36%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TrEMBL
Match: A0A087GTR9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G353400 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.6e-100 Identity = 182/268 (67.91%), Postives = 229/268 (85.45%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TrEMBL
Match: V4M4S0_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10027876mg PE=3 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 5.8e-100 Identity = 184/270 (68.15%), Postives = 227/270 (84.07%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TAIR10
Match: AT5G37820.1 (AT5G37820.1 NOD26-like intrinsic protein 4;2) HSP 1 Score: 366.3 bits (939), Expect = 1.6e-101 Identity = 182/269 (67.66%), Postives = 220/269 (81.78%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TAIR10
Match: AT5G37810.1 (AT5G37810.1 NOD26-like intrinsic protein 4;1) HSP 1 Score: 362.5 bits (929), Expect = 2.3e-100 Identity = 180/276 (65.22%), Postives = 222/276 (80.43%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TAIR10
Match: AT4G18910.1 (AT4G18910.1 NOD26-like intrinsic protein 1;2) HSP 1 Score: 294.3 bits (752), Expect = 7.8e-80 Identity = 145/238 (60.92%), Postives = 184/238 (77.31%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TAIR10
Match: AT4G19030.1 (AT4G19030.1 NOD26-like major intrinsic protein 1) HSP 1 Score: 276.6 bits (706), Expect = 1.7e-74 Identity = 133/238 (55.88%), Postives = 177/238 (74.37%), Query Frame = 1
BLAST of Csa3G345890.1 vs. TAIR10
Match: AT1G31885.1 (AT1G31885.1 NOD26-like intrinsic protein 3;1) HSP 1 Score: 252.7 bits (644), Expect = 2.6e-67 Identity = 125/233 (53.65%), Postives = 163/233 (69.96%), Query Frame = 1
BLAST of Csa3G345890.1 vs. NCBI nr
Match: gi|449464154|ref|XP_004149794.1| (PREDICTED: probable aquaporin NIP-type [Cucumis sativus]) HSP 1 Score: 530.0 bits (1364), Expect = 2.4e-147 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1
BLAST of Csa3G345890.1 vs. NCBI nr
Match: gi|659114474|ref|XP_008457069.1| (PREDICTED: probable aquaporin NIP-type [Cucumis melo]) HSP 1 Score: 500.4 bits (1287), Expect = 2.0e-138 Identity = 251/269 (93.31%), Postives = 259/269 (96.28%), Query Frame = 1
BLAST of Csa3G345890.1 vs. NCBI nr
Match: gi|590652058|ref|XP_007033055.1| (NOD26-like intrinsic protein 4,1 [Theobroma cacao]) HSP 1 Score: 387.5 bits (994), Expect = 1.9e-104 Identity = 188/264 (71.21%), Postives = 223/264 (84.47%), Query Frame = 1
BLAST of Csa3G345890.1 vs. NCBI nr
Match: gi|1009126559|ref|XP_015880221.1| (PREDICTED: probable aquaporin NIP-type [Ziziphus jujuba]) HSP 1 Score: 381.3 bits (978), Expect = 1.4e-102 Identity = 187/270 (69.26%), Postives = 225/270 (83.33%), Query Frame = 1
BLAST of Csa3G345890.1 vs. NCBI nr
Match: gi|566211041|ref|XP_006372594.1| (hypothetical protein POPTR_0017s03060g [Populus trichocarpa]) HSP 1 Score: 380.9 bits (977), Expect = 1.8e-102 Identity = 190/276 (68.84%), Postives = 226/276 (81.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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