Csa3G280930.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G280930.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein T21H19_30
Location	Chr3 : 16630346 .. 16632742 (-)
Sequence length	525

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCTTCCACTATAAATGAAACCCACCTCCTATCTAACGATTTTCTCCCCTCCCGTGGCGGTGGCTCTAAGCTCCAGCTTTTCTTATCTCTTCCCTTGGCTTCCTTCAGGTCTTAATCTCTATTTCTCTTTTTCCCTTTTTTTTTTTTTTTTTTTTTCAATTCTTAAATCTCCTCTTTCTCTATTTTAAACGTACCCACTTCGATTTTTTTTTTTTTTTCATTTCTTTTAGCTTTTCCGACGTTTTTCTGTTTCTATTTCTTTGGTTGTTGTTTTCTTTTTCTATTTTTGATCTAGATTTACAACCCCTTCTTTTCGTTTTTCCCGGATCTGGACGACTCTTAGCTGGTTTTCTCAATTACCCTTTTTTCCCTCTTTGGGTCAATACCCCTAATCCCAATTCTATATATCCCATGCTTTGATCTTTGCTTAAGGTTTGTCCTCGTTAGGGAAAGGAGAGACCAATTTGCTTCTAGTTTGATTCTGAACAAGGTTGTTTCAGGTTTTTATAAGGATCTGTTCTTTGATTGTTTGATGGGTTTTTTTTTTTCTTTTTTTTTTTTGTTATGAGGAAGATCACATCTTGTTTTCTTGGTTTACATCTTAGATCTTTTGCTGATTGGGGTAATTTTGGAAGATCTTGTTTGTTTTTTGTCAAAATTGTTAGCTAAAATGATATGGATTTGTGTATTTGTTCATGTTCTGTTCTGAAAATGGGATCTTTAGCTCAGATCTGTTGATTCTGAACTTAGAGTGATTTGGATCTATTGTTGTTTGTGTTACTACATGGGATTTTGAGCTTTGATGGATTGGATTGACTAGTTTTTCATTAGATCTTATTGTTGCTATAATTTGCTAGATTTATGGGATTTTGATCTTGGATAGAATGGAATTTTGACCAGTTTTTCATCAGATCTGACTATGTTAGAGTTATCTTGCTTCAATTGTTGCAACACATTTTAAATCGTGATCTGTGCAGGCGTTCTTCTGTGGATCTGCCAGTTTCAAAGATGAATCATTTTATTGTTCAGCAGAACACTTTTCTTTCATGTGAAGAGACTAGGGGTTTTGCCTCTATCTCTGATCTGAAGGACCCTGTTGTCTGCCCGAAGCCCAGGCGACTTGCGATTCTTGCTAACAATCACATTAAACAGCCCTTGAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTTCTTGACATCATTTTAAAGAAGGCAAGTTCTTATTTCCCCTATGGTGTTTCCTGCCATTAGTTCATTAAGCTGTTAGTTTTTGCCCCTAAATCAGCATAGTTTTATTATCTGAATATAATTTGGTACTATCACAGCTTTAGCCTGCAAAAAATTCTAATAAATAAGTGAAGTACAAGCATCCCTTTTCGAGTATTGTATATGAAGAAAGTCTTTTGCCATTTCACAGTTTTGGCCTGGAAATAACTCTTATACAAATATATAATTGCATTCTCTTTTGGTGTTCCACATATTTATTTTTTACCTAGTTTCTTGTCAAAAGTCTTATGTTTCACTTGCTCTATTGAGGCTGTGTTAAATTTTCTTTAGATTCTTGAGGGTTTGTTGTCTAGATTTCAACCTTTTCTCTTTGTCATTACAATACGATTGACTGCAACTTTGAATGGCATAGGGGTCGGAACAATCCAGTGCTCATGTGGCTTCTTCACCCCCATTTTTTAGTGGGTCTCCGCCGAGCCGGGCTTCGAACCCATTAATCCAGGATGCCCGGTTTGGGGATGAGAAACTCAGTCCTATGCCAGCATTGCCTGCATATTCCCCATCTGGTCTCTCATCCCCATCTTCAGCATCTTCAGCGCACAAAGGAGGAGGGTGTGCGAGGATGAAGTTTGGTCTAAAACCGGCAGCAGTTAGAGTAGAAGGATTTGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCTTAAAAAACCAACCTCCATCAATGGAAAAGTGTAAATAGAGAATGGAGCGAAAAAGAGTGCAACCAAACATTTTCAACCACAGGCAAGACTTCTTTTTAACAACCAGAGGAAAACAACATTCAAATAGAGAATGCAAGAGAAATTTGAGACCCCATCTGTAGTAGTGTAAATATAAGAAAATGTTTTTGCTGGTGATCATCCAAATTTGATATTTTTTTCCCTTCCTTTTCTTTTGGATTCTTGTGGGATAATGGGGGGAGTGGGTTGAGATAGAGAAACAAACAAACCTTGTGTTGTAGAGAAAAAGGTTTGGGAATTGGGAAAAGGGATGAGTGAGTGAGTGGTTCATCTTCATTTTGTACTGTTGTATAAAGTTGGGGGTACTGTGTGTGTGGAGGGAAGGGAGAGGGAGTCTTGTATTTCTCTTTTTTTTTTTTT

mRNA sequence

ATGAATCATTTTATTGTTCAGCAGAACACTTTTCTTTCATGTGAAGAGACTAGGGGTTTTGCCTCTATCTCTGATCTGAAGGACCCTGTTGTCTGCCCGAAGCCCAGGCGACTTGCGATTCTTGCTAACAATCACATTAAACAGCCCTTGAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTTCTTGACATCATTTTAAAGAAGGGGTCGGAACAATCCAGTGCTCATGTGGCTTCTTCACCCCCATTTTTTAGTGGGTCTCCGCCGAGCCGGGCTTCGAACCCATTAATCCAGGATGCCCGGTTTGGGGATGAGAAACTCAGTCCTATGCCAGCATTGCCTGCATATTCCCCATCTGGTCTCTCATCCCCATCTTCAGCATCTTCAGCGCACAAAGGAGGAGGGTGTGCGAGGATGAAGTTTGGTCTAAAACCGGCAGCAGTTAGAGTAGAAGGATTTGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCTTAA

Coding sequence (CDS)

ATGAATCATTTTATTGTTCAGCAGAACACTTTTCTTTCATGTGAAGAGACTAGGGGTTTTGCCTCTATCTCTGATCTGAAGGACCCTGTTGTCTGCCCGAAGCCCAGGCGACTTGCGATTCTTGCTAACAATCACATTAAACAGCCCTTGAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTTCTTGACATCATTTTAAAGAAGGGGTCGGAACAATCCAGTGCTCATGTGGCTTCTTCACCCCCATTTTTTAGTGGGTCTCCGCCGAGCCGGGCTTCGAACCCATTAATCCAGGATGCCCGGTTTGGGGATGAGAAACTCAGTCCTATGCCAGCATTGCCTGCATATTCCCCATCTGGTCTCTCATCCCCATCTTCAGCATCTTCAGCGCACAAAGGAGGAGGGTGTGCGAGGATGAAGTTTGGTCTAAAACCGGCAGCAGTTAGAGTAGAAGGATTTGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCTTAA

Protein sequence

MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA*

Homology

[Close]

BLAST of Csa3G280930.1 vs. TrEMBL
Match: A0A0A0L9U7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G280930 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.1e-94
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60
           MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS
Sbjct: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60

Query: 61  KAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPA 120
           KAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPA
Sbjct: 61  KAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPA 120

Query: 121 YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 175
           YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Sbjct: 121 YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 174

[Close]

BLAST of Csa3G280930.1 vs. TrEMBL
Match: B9S5F6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1571370 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.7e-58
Identity = 121/179 (67.60%), Postives = 142/179 (79.33%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWH---QTEV 60
           MNHF +Q+N   SC+E+RG  SI D K PVVCPKPRR+ ILANN I+ PLRWH   Q E+
Sbjct: 1   MNHFNLQKNAVASCDESRGLVSIYDPKGPVVCPKPRRVGILANNPIR-PLRWHMSHQAEI 60

Query: 61  CDSKAGADLLDIILKKGSE--QSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPM 120
            +SKAGADLLDIIL K     +S+  VASSPPFFSGSPP+RA+NPLIQDARFGDEKL+P+
Sbjct: 61  YESKAGADLLDIILMKEGHAVESATQVASSPPFFSGSPPTRATNPLIQDARFGDEKLTPI 120

Query: 121 PALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 175
           P L   +PSGLSSP+ +S   + GGC RM +GLKPAAVRVEGFDCL+RDRQNS IPA+A
Sbjct: 121 PPLSIPTPSGLSSPTPSS---RKGGCVRMNYGLKPAAVRVEGFDCLNRDRQNSSIPAMA 175

[Close]

BLAST of Csa3G280930.1 vs. TrEMBL
Match: A0A067K9N7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12982 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.1e-57
Identity = 124/182 (68.13%), Postives = 143/182 (78.57%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRW---HQTEV 60
           MNHF +Q+N   SC+E RG  SI D K PVVCPKPRR+ ILANN I+  LRW   HQ E+
Sbjct: 1   MNHFNLQKNAIASCDEARGSVSIYDPKGPVVCPKPRRVGILANNPIRS-LRWQMSHQAEM 60

Query: 61  CDSKAGADLLDIILKKGS---EQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSP 120
           CD+KAGADLLDIIL K     EQS+  VASSPPFF GSPP+RA+NP+IQDARFGDEKL+P
Sbjct: 61  CDAKAGADLLDIILMKDGYRVEQSTNQVASSPPFFCGSPPTRATNPVIQDARFGDEKLNP 120

Query: 121 MP--ALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA 175
           M   ++P+ SPSGLSSP+S+    + GGC RM FGLKPAAVRVEGFDCLSRDRQNS IPA
Sbjct: 121 MSQMSIPS-SPSGLSSPTSS----RIGGCVRMTFGLKPAAVRVEGFDCLSRDRQNSSIPA 176

[Close]

BLAST of Csa3G280930.1 vs. TrEMBL
Match: U5GCT0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15650g PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.5e-56
Identity = 122/181 (67.40%), Postives = 137/181 (75.69%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRW---HQTEV 60
           MN   +QQN    C+E RG  SISD K PVVCPKPRR+ ILAN+ I+ PLRW   HQ E+
Sbjct: 1   MNQVSLQQNAITFCDERRGLVSISDYKGPVVCPKPRRVGILANSPIR-PLRWPVSHQAEM 60

Query: 61  CDSKAGADLLDIILKK---GSEQSSAHVASSPP-FFSGSPPSRASNPLIQDARFGDEKLS 120
           CDSKAGA+LLDIIL K   G++  +   ASSPP FF GSPP+R  NPLIQDARFGDEK +
Sbjct: 61  CDSKAGAELLDIILMKEGHGADYPANQAASSPPPFFCGSPPTRVGNPLIQDARFGDEKFT 120

Query: 121 PMPALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAV 175
           P+  L   SPSGLSSPS+  SA KGGGC RMKFGLKPA VRVEGFDCL+RDRQNS IPAV
Sbjct: 121 PISPLSIPSPSGLSSPST--SACKGGGCVRMKFGLKPAEVRVEGFDCLNRDRQNSSIPAV 178

[Close]

BLAST of Csa3G280930.1 vs. TrEMBL
Match: D9J001_HEVBR (Putative uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.3e-56
Identity = 122/182 (67.03%), Postives = 140/182 (76.92%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCE--ETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWH---QT 60
           MN F + +N F SC+  ETRG  SI D K PVVCPKPRR+ ILANN   +PLRWH   Q 
Sbjct: 1   MNQFNLHKNAFASCDRTETRGLVSIFDSKGPVVCPKPRRVGILANNP-SRPLRWHMSHQA 60

Query: 61  EVCDSKAGADLLDIILKK---GSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKL 120
           E+CDSKAGA+LLDIIL K   G+EQS+ HVAS  PFF GSPP+RA+NP+IQDARFGDEKL
Sbjct: 61  EMCDSKAGAELLDIILMKDGHGTEQSANHVASPLPFFCGSPPTRAANPVIQDARFGDEKL 120

Query: 121 SPMPALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA 175
           +P+  L   SPS LSSP+S     + GGC RMKFGLKPAAVRVEGFDCL+RDRQNS IPA
Sbjct: 121 TPVSPLLIPSPSSLSSPTS-----RKGGCVRMKFGLKPAAVRVEGFDCLNRDRQNSSIPA 176

[Close]

BLAST of Csa3G280930.1 vs. TAIR10
Match: AT5G16110.1 (AT5G16110.1 unknown protein)

HSP 1 Score: 195.3 bits (495), Expect = 3.2e-50
Identity = 108/183 (59.02%), Postives = 129/183 (70.49%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTE---- 60
           MNH  +QQN F+S EE  GF    D KD VVCPKPRR+ +LANN I+ PLR H ++    
Sbjct: 67  MNHCNLQQNAFMSREEMMGF----DRKDLVVCPKPRRVGLLANNVIR-PLRLHMSQAAAD 126

Query: 61  VCDSKAGADLLDIILKKGSEQSSAHV-ASSPPFFSGSPPSRASNPLIQDARFGDEKLSPM 120
           +CDSKAGA+LL+II +K    +   + +SSPP+F GSPPSRA+NPL QDARF DEKL+P+
Sbjct: 127 LCDSKAGAELLEIIRRKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPI 186

Query: 121 ----PALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIP 175
               P L  YS +G  SPSS+SS+    GC RMKFGL   AVRVEGFDCL+RDRQNS IP
Sbjct: 187 SPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDCLNRDRQNSSIP 244

[Close]

BLAST of Csa3G280930.1 vs. TAIR10
Match: AT3G02555.1 (AT3G02555.1 unknown protein)

HSP 1 Score: 172.9 bits (437), Expect = 1.7e-43
Identity = 106/180 (58.89%), Postives = 118/180 (65.56%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASI-SDLKDPVVCPKPRRLAILANNHIKQPLRWHQT---- 60
           MNH  +QQN FLS EE+RGF  I S   D VVCPKPRR    ANN I+ P R H +    
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDSVVCPKPRR----ANNVIR-PFRLHFSLSGA 60

Query: 61  -EVCDSKAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSP 120
            +VCDSKAG DLLDI  +K S  S      SPPFF GSPPSRA+NPL QDARFGDEKL+ 
Sbjct: 61  DDVCDSKAGEDLLDIFRRKESVSSR-----SPPFFLGSPPSRAANPLAQDARFGDEKLNT 120

Query: 121 MPALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 175
           +      SPS   SP   S++    GC RMKFG+KPA VRVEGFDCL+RDR NS IPA+A
Sbjct: 121 V------SPS--LSPLLPSASRVKSGCGRMKFGVKPATVRVEGFDCLNRDRPNSSIPAMA 162

[Close]

BLAST of Csa3G280930.1 vs. TAIR10
Match: AT1G68490.1 (AT1G68490.1 unknown protein)

HSP 1 Score: 141.7 bits (356), Expect = 4.2e-34
Identity = 91/185 (49.19%), Postives = 110/185 (59.46%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLK---DPVVCPKPRRLAILANNHI-KQPLRW---H 60
           MNHF VQ N F +  + R  +S+S ++     VVCPKPRR+ +  N+H   + LR    H
Sbjct: 1   MNHFAVQPNAFAAGGDLRS-SSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSH 60

Query: 61  QTEVCDSKAGADLLDIILKK---GSEQSSAHVASSP-PFFSGSPPSRASNPLIQDARFGD 120
           Q E+C+SKA  D+LDIIL K   G+EQ +  V  SP PF  GSPPSR +NPL QDARF D
Sbjct: 61  QLELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQDARFRD 120

Query: 121 EKLSPMPALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSR 175
           E +S    +P       SS  S+SS  KGG   R  FG  P  VRVEGFDCL RD +N  
Sbjct: 121 EIVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSP-KVRVEGFDCLDRDSRNCS 180

[Close]

BLAST of Csa3G280930.1 vs. TAIR10
Match: AT1G13390.1 (AT1G13390.1 unknown protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.5e-28
Identity = 82/180 (45.56%), Postives = 103/180 (57.22%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRW---HQTEV 60
           MN   +QQN F   EE R  A++SD +D V+CPKPRR+  L N+H  + LRW   HQ E+
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGAL-NHHSSRSLRWQLNHQMEL 61

Query: 61  CDSKAGADLLDIILKKGS----EQSSAHVASSPP-FFSGSPPSRASNPLIQDARFGDEKL 120
           C+S +G+++LD IL KG     EQ       +PP FF+GSPPSR SNPL +D+ F +E L
Sbjct: 62  CESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREELL 121

Query: 121 ---SPMPALP-AYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNS 169
              SP P+ P A  P   SSP + S        A   FG  P  VRV GFDC   DR++S
Sbjct: 122 MVASPSPSTPRATKPQPPSSPRNGSCV-----MAATSFGNNP-VVRVVGFDC---DRRSS 168

[Close]

BLAST of Csa3G280930.1 vs. NCBI nr
Match: gi|778680681|ref|XP_011651371.1| (PREDICTED: uncharacterized protein LOC101218020 [Cucumis sativus])

HSP 1 Score: 354.0 bits (907), Expect = 1.5e-94
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60
           MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS
Sbjct: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60

Query: 61  KAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPA 120
           KAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPA
Sbjct: 61  KAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPA 120

Query: 121 YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 175
           YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Sbjct: 121 YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 174

[Close]

BLAST of Csa3G280930.1 vs. NCBI nr
Match: gi|659123295|ref|XP_008461589.1| (PREDICTED: uncharacterized protein LOC103500158 [Cucumis melo])

HSP 1 Score: 351.7 bits (901), Expect = 7.5e-94
Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60
           MNHFIVQQNTF+SCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS
Sbjct: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60

Query: 61  KAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPA 120
           KAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMP LPA
Sbjct: 61  KAGADLLDIILKKGSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPGLPA 120

Query: 121 YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 175
           YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Sbjct: 121 YSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 174

[Close]

BLAST of Csa3G280930.1 vs. NCBI nr
Match: gi|1009177269|ref|XP_015869877.1| (PREDICTED: uncharacterized protein LOC107407161 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 240.4 bits (612), Expect = 2.4e-60
Identity = 128/181 (70.72%), Postives = 151/181 (83.43%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEE-TRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWH---QTE 60
           MNH  +QQN F++CEE TRG A +SD KDPVVCPKPRR+ IL+NN +K PLR H   Q+E
Sbjct: 1   MNHCNLQQNVFVACEEMTRGPALVSDPKDPVVCPKPRRVGILSNNMLK-PLRLHMSQQSE 60

Query: 61  VCDSKAGADLLDIILKK---GSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLS 120
           +CDSKAG++LLDIIL K   G+EQS+ +VASSPP+F GSPPSRA+NPL+QDARFGDEK  
Sbjct: 61  LCDSKAGSELLDIILMKEGFGAEQSAGYVASSPPYFCGSPPSRAANPLVQDARFGDEK-- 120

Query: 121 PMPALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAV 175
           P+PALP  SPSGLSSPSSA+   + GGC RMK+GLKPAAVRVEGFDCL+RDRQNS IPA+
Sbjct: 121 PLPALPFASPSGLSSPSSAA---RKGGCVRMKYGLKPAAVRVEGFDCLNRDRQNSSIPAM 175

[Close]

BLAST of Csa3G280930.1 vs. NCBI nr
Match: gi|1009177267|ref|XP_015869876.1| (PREDICTED: uncharacterized protein LOC107407161 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 240.0 bits (611), Expect = 3.2e-60
Identity = 128/182 (70.33%), Postives = 151/182 (82.97%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEE-TRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWH----QT 60
           MNH  +QQN F++CEE TRG A +SD KDPVVCPKPRR+ IL+NN +K PLR H    Q+
Sbjct: 1   MNHCNLQQNVFVACEEMTRGPALVSDPKDPVVCPKPRRVGILSNNMLK-PLRLHMSSQQS 60

Query: 61  EVCDSKAGADLLDIILKK---GSEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKL 120
           E+CDSKAG++LLDIIL K   G+EQS+ +VASSPP+F GSPPSRA+NPL+QDARFGDEK 
Sbjct: 61  ELCDSKAGSELLDIILMKEGFGAEQSAGYVASSPPYFCGSPPSRAANPLVQDARFGDEK- 120

Query: 121 SPMPALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPA 175
            P+PALP  SPSGLSSPSSA+   + GGC RMK+GLKPAAVRVEGFDCL+RDRQNS IPA
Sbjct: 121 -PLPALPFASPSGLSSPSSAA---RKGGCVRMKYGLKPAAVRVEGFDCLNRDRQNSSIPA 176

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BLAST of Csa3G280930.1 vs. NCBI nr
Match: gi|255560420|ref|XP_002521225.1| (PREDICTED: uncharacterized protein LOC8272337 [Ricinus communis])

HSP 1 Score: 233.0 bits (593), Expect = 3.9e-58
Identity = 121/179 (67.60%), Postives = 142/179 (79.33%), Query Frame = 1


Query: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWH---QTEV 60
           MNHF +Q+N   SC+E+RG  SI D K PVVCPKPRR+ ILANN I+ PLRWH   Q E+
Sbjct: 1   MNHFNLQKNAVASCDESRGLVSIYDPKGPVVCPKPRRVGILANNPIR-PLRWHMSHQAEI 60

Query: 61  CDSKAGADLLDIILKKGSE--QSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPM 120
            +SKAGADLLDIIL K     +S+  VASSPPFFSGSPP+RA+NPLIQDARFGDEKL+P+
Sbjct: 61  YESKAGADLLDIILMKEGHAVESATQVASSPPFFSGSPPTRATNPLIQDARFGDEKLTPI 120

Query: 121 PALPAYSPSGLSSPSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 175
           P L   +PSGLSSP+ +S   + GGC RM +GLKPAAVRVEGFDCL+RDRQNS IPA+A
Sbjct: 121 PPLSIPTPSGLSSPTPSS---RKGGCVRMNYGLKPAAVRVEGFDCLNRDRQNSSIPAMA 175

The following BLAST results are available for this feature:

BLAST of Csa3G280930.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9U7_CUCSA	1.1e-94	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G280930 PE=4 SV=1	[more]
B9S5F6_RICCO	2.7e-58	67.60	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1571370 PE=4 SV=1	[more]
A0A067K9N7_JATCU	5.1e-57	68.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12982 PE=4 SV=1	[more]
U5GCT0_POPTR	2.5e-56	67.40	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15650g PE=4 SV=1	[more]
D9J001_HEVBR	3.3e-56	67.03	Putative uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1	[more]

BLAST of Csa3G280930.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16110.1	3.2e-50	59.02	unknown protein	[more]
AT3G02555.1	1.7e-43	58.89	unknown protein	[more]
AT1G68490.1	4.2e-34	49.19	unknown protein	[more]
AT1G13390.1	1.5e-28	45.56	unknown protein	[more]

BLAST of Csa3G280930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680681\|ref\|XP_011651371.1\|	1.5e-94	100.00	PREDICTED: uncharacterized protein LOC101218020 [Cucumis sativus]	[more]
gi\|659123295\|ref\|XP_008461589.1\|	7.5e-94	98.85	PREDICTED: uncharacterized protein LOC103500158 [Cucumis melo]	[more]
gi\|1009177269\|ref\|XP_015869877.1\|	2.4e-60	70.72	PREDICTED: uncharacterized protein LOC107407161 isoform X2 [Ziziphus jujuba]	[more]
gi\|1009177267\|ref\|XP_015869876.1\|	3.2e-60	70.33	PREDICTED: uncharacterized protein LOC107407161 isoform X1 [Ziziphus jujuba]	[more]
gi\|255560420\|ref\|XP_002521225.1\|	3.9e-58	67.60	PREDICTED: uncharacterized protein LOC8272337 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa3G280930	Csa3G280930	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa3G280930.1	Csa3G280930.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G280930.1.utr3p1	Csa3G280930.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G280930.1.cds3	Csa3G280930.1.cds3	CDS
Csa3G280930.1.cds2	Csa3G280930.1.cds2	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa3G280930.1.utr5p2	Csa3G280930.1.utr5p2	five_prime_UTR
Csa3G280930.1.utr5p1	Csa3G280930.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	FAMILY NOT NAMED	coord: 1..174 score: 5.4
None	No IPR available	PANTHER	PTHR33384:SF2	SUBFAMILY NOT NAMED	coord: 1..174 score: 5.4