Csa3G202750.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa3G202750.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13895164 .. 13895801 (+)
Sequence length399
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCACCCTTGCACTTTTGTCTGAGAACCCTATTTCTTACACTTTTGTCATTCACCTCGGTCGAGCAAGCATCGAGTTAGCCTCGGGATCCTTCAAATTCCTTCTGTACCTTCAATCTACGTTAAGCATCAAGATATTGCCCCAGGATTAAACTCTTGTCTTTAATCTTGCCCGAGATTCTATATGATTGCCCGAGATCCTTAATAATTTCCTTTCTGCTTCCAATCTCAATTGAGTAATACTCTACGATTCCCTTTATTTTTTAGGCACTTGTCTCACAATAAGAACGTTTTATAGTGAGGCTTTCTATTTATTAGGTACACAATGACCATAGTGGATACATAAAGAGAAAGATGTAGGAGGTTCGAGAATGGTTTAAGATCAGAAATTAGAACCCTTGTCAAAACCATCGTAGTAAGATATGATTATGCAGAATTGGTGGACGAGACTCTACACATTGAAAAGAATTTAAAAGGAAAACGACCAAGTTTGGTGGTAAGTGGAGAAGGAGAAAAAGAAAGTGTTGAAGATTTTAGTAAAATGTCTAAGCCTACATTTAGTCGAGGATCAGATTGGAGTGGCGATACAAGGTTTGGGTGTATCCGAATGCAACAAAAGACATTTTGGGGCTTGTAA

mRNA sequence

ATGTTCACCCTTGCACTTTTGTCTGAGAACCCTATTTCTTACACTTTTGTCATTCACCTCGGTCGAGCAAGCATCGAGTTAGCCTCGGGATCCTTCAAATTCCTTCTGTACCTTCAATCTACGAGGTTCGAGAATGGTTTAAGATCAGAAATTAGAACCCTTGTCAAAACCATCGTAGTAAGATATGATTATGCAGAATTGGTGGACGAGACTCTACACATTGAAAAGAATTTAAAAGGAAAACGACCAAGTTTGGTGGTAAGTGGAGAAGGAGAAAAAGAAAGTGTTGAAGATTTTAGTAAAATGTCTAAGCCTACATTTAGTCGAGGATCAGATTGGAGTGGCGATACAAGGTTTGGGTGTATCCGAATGCAACAAAAGACATTTTGGGGCTTGTAA

Coding sequence (CDS)

ATGTTCACCCTTGCACTTTTGTCTGAGAACCCTATTTCTTACACTTTTGTCATTCACCTCGGTCGAGCAAGCATCGAGTTAGCCTCGGGATCCTTCAAATTCCTTCTGTACCTTCAATCTACGAGGTTCGAGAATGGTTTAAGATCAGAAATTAGAACCCTTGTCAAAACCATCGTAGTAAGATATGATTATGCAGAATTGGTGGACGAGACTCTACACATTGAAAAGAATTTAAAAGGAAAACGACCAAGTTTGGTGGTAAGTGGAGAAGGAGAAAAAGAAAGTGTTGAAGATTTTAGTAAAATGTCTAAGCCTACATTTAGTCGAGGATCAGATTGGAGTGGCGATACAAGGTTTGGGTGTATCCGAATGCAACAAAAGACATTTTGGGGCTTGTAA

Protein sequence

MFTLALLSENPISYTFVIHLGRASIELASGSFKFLLYLQSTRFENGLRSEIRTLVKTIVVRYDYAELVDETLHIEKNLKGKRPSLVVSGEGEKESVEDFSKMSKPTFSRGSDWSGDTRFGCIRMQQKTFWGL*
Homology
[Close]
BLAST of Csa3G202750.1 vs. TrEMBL
Match: A0A0A0LA91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G202750 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 8.4e-68
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1 

Query: 1   MFTLALLSENPISYTFVIHLGRASIELASGSFKFLLYLQSTRFENGLRSEIRTLVKTIVV 60
           MFTLALLSENPISYTFVIHLGRASIELASGSFKFLLYLQSTRFENGLRSEIRTLVKTIVV
Sbjct: 1   MFTLALLSENPISYTFVIHLGRASIELASGSFKFLLYLQSTRFENGLRSEIRTLVKTIVV 60

Query: 61  RYDYAELVDETLHIEKNLKGKRPSLVVSGEGEKESVEDFSKMSKPTFSRGSDWSGDTRFG 120
           RYDYAELVDETLHIEKNLKGKRPSLVVSGEGEKESVEDFSKMSKPTFSRGSDWSGDTRFG
Sbjct: 61  RYDYAELVDETLHIEKNLKGKRPSLVVSGEGEKESVEDFSKMSKPTFSRGSDWSGDTRFG 120

Query: 121 CIRMQQKTFWGL 133
           CIRMQQKTFWGL
Sbjct: 121 CIRMQQKTFWGL 132

[Close]
BLAST of Csa3G202750.1 vs. NCBI nr
Match: gi|700202384|gb|KGN57517.1| (hypothetical protein Csa_3G202750 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1 

Query: 1   MFTLALLSENPISYTFVIHLGRASIELASGSFKFLLYLQSTRFENGLRSEIRTLVKTIVV 60
           MFTLALLSENPISYTFVIHLGRASIELASGSFKFLLYLQSTRFENGLRSEIRTLVKTIVV
Sbjct: 1   MFTLALLSENPISYTFVIHLGRASIELASGSFKFLLYLQSTRFENGLRSEIRTLVKTIVV 60

Query: 61  RYDYAELVDETLHIEKNLKGKRPSLVVSGEGEKESVEDFSKMSKPTFSRGSDWSGDTRFG 120
           RYDYAELVDETLHIEKNLKGKRPSLVVSGEGEKESVEDFSKMSKPTFSRGSDWSGDTRFG
Sbjct: 61  RYDYAELVDETLHIEKNLKGKRPSLVVSGEGEKESVEDFSKMSKPTFSRGSDWSGDTRFG 120

Query: 121 CIRMQQKTFWGL 133
           CIRMQQKTFWGL
Sbjct: 121 CIRMQQKTFWGL 132

The following BLAST results are available for this feature:
BLAST of Csa3G202750.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA91_CUCSA8.4e-68100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G202750 PE=4 SV=1[more]
BLAST of Csa3G202750.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202384|gb|KGN57517.1|1.2e-67100.00hypothetical protein Csa_3G202750 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa3G202750Csa3G202750gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa3G202750.1Csa3G202750.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa3G202750.1.cds1Csa3G202750.1.cds1CDS
Csa3G202750.1.cds2Csa3G202750.1.cds2CDS