Csa3G194420.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa3G194420.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13471454 .. 13471700 (+)
Sequence length213
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTTGGTTGCATCTCTTGGCTGGGAATTATTTTGGGTACCCAGAGCATAAGGGTTCATGTGGATACAGAAGTCCATGAACAAAAGAGAAAGCATTTTAGAAATCCTGTTAAGTGTTGAATAATAATCTAAAGAGTAATATTATAGTTCCAATGAGGATAGGCTTATGGTGATGGTGATGGTGATGAGGAAGGATTCCGATAAGCTGCCAGATGAATTCTTCTCAAGCTCGTATTCTAGGTAA

mRNA sequence

ATGTTTGTTGGTTGCATCTCTTGGCTGGGAATTATTTTGGGTACCCAGAGCATAAGGGTTCATGTGGATACAGAAGTCCATGAACAAAAGAGAAAGCATTTTAGAAATCCTGTTAATTCCAATGAGGATAGGCTTATGGTGATGGTGATGGTGATGAGGAAGGATTCCGATAAGCTGCCAGATGAATTCTTCTCAAGCTCGTATTCTAGGTAA

Coding sequence (CDS)

ATGTTTGTTGGTTGCATCTCTTGGCTGGGAATTATTTTGGGTACCCAGAGCATAAGGGTTCATGTGGATACAGAAGTCCATGAACAAAAGAGAAAGCATTTTAGAAATCCTGTTAATTCCAATGAGGATAGGCTTATGGTGATGGTGATGGTGATGAGGAAGGATTCCGATAAGCTGCCAGATGAATTCTTCTCAAGCTCGTATTCTAGGTAA

Protein sequence

MFVGCISWLGIILGTQSIRVHVDTEVHEQKRKHFRNPVNSNEDRLMVMVMVMRKDSDKLPDEFFSSSYSR*
Homology
[Close]
BLAST of Csa3G194420.1 vs. TrEMBL
Match: A0A0A0L684_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G194420 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.3e-32
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MFVGCISWLGIILGTQSIRVHVDTEVHEQKRKHFRNPVNSNEDRLMVMVMVMRKDSDKLP 60
          MFVGCISWLGIILGTQSIRVHVDTEVHEQKRKHFRNPVNSNEDRLMVMVMVMRKDSDKLP
Sbjct: 1  MFVGCISWLGIILGTQSIRVHVDTEVHEQKRKHFRNPVNSNEDRLMVMVMVMRKDSDKLP 60

Query: 61 DEFFSSSYSR 71
          DEFFSSSYSR
Sbjct: 61 DEFFSSSYSR 70

[Close]
BLAST of Csa3G194420.1 vs. NCBI nr
Match: gi|700202342|gb|KGN57475.1| (hypothetical protein Csa_3G194420 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 3.3e-32
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MFVGCISWLGIILGTQSIRVHVDTEVHEQKRKHFRNPVNSNEDRLMVMVMVMRKDSDKLP 60
          MFVGCISWLGIILGTQSIRVHVDTEVHEQKRKHFRNPVNSNEDRLMVMVMVMRKDSDKLP
Sbjct: 1  MFVGCISWLGIILGTQSIRVHVDTEVHEQKRKHFRNPVNSNEDRLMVMVMVMRKDSDKLP 60

Query: 61 DEFFSSSYSR 71
          DEFFSSSYSR
Sbjct: 61 DEFFSSSYSR 70

The following BLAST results are available for this feature:
BLAST of Csa3G194420.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L684_CUCSA2.3e-32100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G194420 PE=4 SV=1[more]
BLAST of Csa3G194420.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202342|gb|KGN57475.1|3.3e-32100.00hypothetical protein Csa_3G194420 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa3G194420Csa3G194420gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa3G194420.1Csa3G194420.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa3G194420.1.cds1Csa3G194420.1.cds1CDS
Csa3G194420.1.cds2Csa3G194420.1.cds2CDS