Csa2G075310.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa2G075310.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 6060051 .. 6060522 (+)
Sequence length225
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACCCCGCCGGAAAATTACTGCGTTGGTTTGGGCAGTAAAGGGGATTGTGATCGTGAATTCAACAGAAATCCCCTTGGAAGAAGAATTTCAGCAAAGGGAAATTTACAATTGAGAAGAGGAAATCAGCAGGCACAAGTGTCCCTGCCAAGAACGACAAAAGCAGGGCTCCATGCGTATGGTCCACGCTTCTTGTTTTTTTCTTTTCTTTTTTTAAAAAATAATAATAATAACAATAGAGAATAATAACGCAAACTCTTTTTTTTGCTTTCTTAATGAAAATTCAAGGTAATTAGATCAAAATCATTTGGCTTCCAAGTTGGTGGTTAAAAACATTCACTCACCTTTTTTATCAATAAACTTTGTTTATAGAGTAAATAATACCATATGACACTGCATAATTTGGAATCCAAACTTACTTAGACAAATGAAACTTGAGATTTTCGGCAATTACGTGGCGGGAGCTTGA

mRNA sequence

ATGGATACCCCGCCGGAAAATTACTGCGTTGGTTTGGGCAGTAAAGGGGATTGTGATCGTGAATTCAACAGAAATCCCCTTGGAAGAAGAATTTCAGCAAAGGGAAATTTACAATTGAGAAGAGGAAATCAGCAGGCACAAGTGTCCCTGCCAAGAACGACAAAAGCAGGGCTCCATGCACAAATGAAACTTGAGATTTTCGGCAATTACGTGGCGGGAGCTTGA

Coding sequence (CDS)

ATGGATACCCCGCCGGAAAATTACTGCGTTGGTTTGGGCAGTAAAGGGGATTGTGATCGTGAATTCAACAGAAATCCCCTTGGAAGAAGAATTTCAGCAAAGGGAAATTTACAATTGAGAAGAGGAAATCAGCAGGCACAAGTGTCCCTGCCAAGAACGACAAAAGCAGGGCTCCATGCACAAATGAAACTTGAGATTTTCGGCAATTACGTGGCGGGAGCTTGA

Protein sequence

MDTPPENYCVGLGSKGDCDREFNRNPLGRRISAKGNLQLRRGNQQAQVSLPRTTKAGLHAQMKLEIFGNYVAGA*
Homology
[Close]
BLAST of Csa2G075310.1 vs. TrEMBL
Match: A0A0A0LKJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075310 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.4e-35
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MDTPPENYCVGLGSKGDCDREFNRNPLGRRISAKGNLQLRRGNQQAQVSLPRTTKAGLHA 60
          MDTPPENYCVGLGSKGDCDREFNRNPLGRRISAKGNLQLRRGNQQAQVSLPRTTKAGLHA
Sbjct: 1  MDTPPENYCVGLGSKGDCDREFNRNPLGRRISAKGNLQLRRGNQQAQVSLPRTTKAGLHA 60

Query: 61 QMKLEIFGNYVAGA 75
          QMKLEIFGNYVAGA
Sbjct: 61 QMKLEIFGNYVAGA 74

[Close]
BLAST of Csa2G075310.1 vs. NCBI nr
Match: gi|700206153|gb|KGN61272.1| (hypothetical protein Csa_2G075310 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 3.4e-35
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MDTPPENYCVGLGSKGDCDREFNRNPLGRRISAKGNLQLRRGNQQAQVSLPRTTKAGLHA 60
          MDTPPENYCVGLGSKGDCDREFNRNPLGRRISAKGNLQLRRGNQQAQVSLPRTTKAGLHA
Sbjct: 1  MDTPPENYCVGLGSKGDCDREFNRNPLGRRISAKGNLQLRRGNQQAQVSLPRTTKAGLHA 60

Query: 61 QMKLEIFGNYVAGA 75
          QMKLEIFGNYVAGA
Sbjct: 61 QMKLEIFGNYVAGA 74

The following BLAST results are available for this feature:
BLAST of Csa2G075310.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKJ3_CUCSA2.4e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075310 PE=4 SV=1[more]
BLAST of Csa2G075310.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206153|gb|KGN61272.1|3.4e-35100.00hypothetical protein Csa_2G075310 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa2G075310Csa2G075310gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa2G075310.1Csa2G075310.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa2G075310.1.cds1Csa2G075310.1.cds1CDS
Csa2G075310.1.cds2Csa2G075310.1.cds2CDS