Csa2G062670.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa2G062670.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 5222970 .. 5223170 (-)
Sequence length201
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATGCGTTGATTTCAAGGAAGTAGGCAGGTGGGGGATGGAAAATGCGGAAGCACCAAGGAAAATGGAAGGTGGGTGTGGGAATTTTGGTGTTGAAATGATAGGTAAGGCCTCGGGAAAAGGGAAAGGAGAAGAGGGAGAAAGAATTGTGCAGATAGACGTTGTGAAGAGAAGGAAGAAGAAGAAGAAGGTGGATTGA

mRNA sequence

ATGAAATGCGTTGATTTCAAGGAAGTAGGCAGGTGGGGGATGGAAAATGCGGAAGCACCAAGGAAAATGGAAGGTGGGTGTGGGAATTTTGGTGTTGAAATGATAGGTAAGGCCTCGGGAAAAGGGAAAGGAGAAGAGGGAGAAAGAATTGTGCAGATAGACGTTGTGAAGAGAAGGAAGAAGAAGAAGAAGGTGGATTGA

Coding sequence (CDS)

ATGAAATGCGTTGATTTCAAGGAAGTAGGCAGGTGGGGGATGGAAAATGCGGAAGCACCAAGGAAAATGGAAGGTGGGTGTGGGAATTTTGGTGTTGAAATGATAGGTAAGGCCTCGGGAAAAGGGAAAGGAGAAGAGGGAGAAAGAATTGTGCAGATAGACGTTGTGAAGAGAAGGAAGAAGAAGAAGAAGGTGGATTGA

Protein sequence

MKCVDFKEVGRWGMENAEAPRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRKKKKKVD*
Homology
[Close]
BLAST of Csa2G062670.1 vs. TrEMBL
Match: A0A0A0LKD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G062670 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MKCVDFKEVGRWGMENAEAPRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60
          MKCVDFKEVGRWGMENAEAPRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK
Sbjct: 1  MKCVDFKEVGRWGMENAEAPRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60

Query: 61 KKKKVD 67
          KKKKVD
Sbjct: 61 KKKKVD 66

[Close]
BLAST of Csa2G062670.1 vs. NCBI nr
Match: gi|700206073|gb|KGN61192.1| (hypothetical protein Csa_2G062670 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MKCVDFKEVGRWGMENAEAPRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60
          MKCVDFKEVGRWGMENAEAPRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK
Sbjct: 1  MKCVDFKEVGRWGMENAEAPRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60

Query: 61 KKKKVD 67
          KKKKVD
Sbjct: 61 KKKKVD 66

The following BLAST results are available for this feature:
BLAST of Csa2G062670.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKD2_CUCSA1.6e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G062670 PE=4 SV=1[more]
BLAST of Csa2G062670.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206073|gb|KGN61192.1|2.3e-30100.00hypothetical protein Csa_2G062670 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa2G062670Csa2G062670gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa2G062670.1Csa2G062670.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa2G062670.1.cds1Csa2G062670.1.cds1CDS