Csa1G597060.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G597060.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Protein LURP-one-related 6; contains IPR025659 (Tubby C-terminal-like domain)
Location	Chr1 : 22628713 .. 22629662 (+)
Sequence length	606

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCTCTAGTTAGCAAATTATACTGTTCATCTTCCGAGGTTGTGTTTGTCGTTAGGACGAGACCACAAGTGATTAATGGAGGAGGTTTTGTAGTGACAGATTGTGATCAGAAAGTTGTTTTTAGTGTTGATGGGTGTGGGGTTCTCGGAAAGGAAGATGAACTGATTCTGAGAGATGGGAAGAGGGAAGCTTTGCTGTTACTACGTGGGAAGGTAATATCCAGTTACTCTACATATTCCCCCAAACAAATCTATTGTAATTTTCATGAACAGAAATGGGTGATTCTAAGTGGAATGTATTCAAAATCTTAACCTTCTTGTGTCTCAGGGAGGGATTTTTGAAGCTCTAAGCTTTCATAAGATGTGGAGGGCTTTCAAATGCGATTACCAAGGATCTAAAAAGGTAGTTTTCAGCTTGAAAAGGCCTAAGTCATGTCTTCCTGTGAAACACGATGTTGGAATCAAAATCAACACAAAACCAAAGGTTAGCACAAAGGATTGGGACTTCGAGATCAGTGGATATTTTCCTGGTAAAAAATGTAGCATCATTGATTCTCAAGGCAATGTAGTAGCTCAGGTACAATTTATTCTCTTTAGACAATTTATTCTCAAGGCAATGTTAGAGATGAGATGTATGTTAATCAGTGTTTCAAATAACTGCAGATTGGAACAAATAAAAAGGCTGGGGAGAAGTCGAGTAAGAATATCTACTATGTGTCAATAAAACCTGGAATTGATCAGGCCTTTGTTGTTGGAGTCATTGCTATTCTCGACAACATCTATGGTGAATCAACCAGCTGCTGAATTTGTAAGAAGGAAGACAATTTAAGCAAGGGGAGATGTTAATTGCTCATTGCAATTCCATCAAATAGTGATTCAACTGGAGGATTGTGGCGACACTCCATTTCGCTTGTCTCCATGAACTGAGACTGCATTTTTTGTCAACA

mRNA sequence

ATGATTCCTCTAGTTAGCAAATTATACTGTTCATCTTCCGAGGTTGTGTTTGTCGTTAGGACGAGACCACAAGTGATTAATGGAGGAGGTTTTGTAGTGACAGATTGTGATCAGAAAGTTGTTTTTAGTGTTGATGGGTGTGGGGTTCTCGGAAAGGAAGATGAACTGATTCTGAGAGATGGGAAGAGGGAAGCTTTGCTGTTACTACGTGGGAAGGGAGGGATTTTTGAAGCTCTAAGCTTTCATAAGATGTGGAGGGCTTTCAAATGCGATTACCAAGGATCTAAAAAGGTAGTTTTCAGCTTGAAAAGGCCTAAGTCATGTCTTCCTGTGAAACACGATGTTGGAATCAAAATCAACACAAAACCAAAGGTTAGCACAAAGGATTGGGACTTCGAGATCAGTGGATATTTTCCTGGTAAAAAATGTAGCATCATTGATTCTCAAGGCAATGTAGTAGCTCAGATTGGAACAAATAAAAAGGCTGGGGAGAAGTCGAGTAAGAATATCTACTATGTGTCAATAAAACCTGGAATTGATCAGGCCTTTGTTGTTGGAGTCATTGCTATTCTCGACAACATCTATGGTGAATCAACCAGCTGCTGA

Coding sequence (CDS)

ATGATTCCTCTAGTTAGCAAATTATACTGTTCATCTTCCGAGGTTGTGTTTGTCGTTAGGACGAGACCACAAGTGATTAATGGAGGAGGTTTTGTAGTGACAGATTGTGATCAGAAAGTTGTTTTTAGTGTTGATGGGTGTGGGGTTCTCGGAAAGGAAGATGAACTGATTCTGAGAGATGGGAAGAGGGAAGCTTTGCTGTTACTACGTGGGAAGGGAGGGATTTTTGAAGCTCTAAGCTTTCATAAGATGTGGAGGGCTTTCAAATGCGATTACCAAGGATCTAAAAAGGTAGTTTTCAGCTTGAAAAGGCCTAAGTCATGTCTTCCTGTGAAACACGATGTTGGAATCAAAATCAACACAAAACCAAAGGTTAGCACAAAGGATTGGGACTTCGAGATCAGTGGATATTTTCCTGGTAAAAAATGTAGCATCATTGATTCTCAAGGCAATGTAGTAGCTCAGATTGGAACAAATAAAAAGGCTGGGGAGAAGTCGAGTAAGAATATCTACTATGTGTCAATAAAACCTGGAATTGATCAGGCCTTTGTTGTTGGAGTCATTGCTATTCTCGACAACATCTATGGTGAATCAACCAGCTGCTGA

Protein sequence

MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDGKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKINTKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGIDQAFVVGVIAILDNIYGESTSC*

Homology

[Close]

BLAST of Csa1G597060.1 vs. Swiss-Prot
Match: LOR6_ARATH (Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.2e-52
Identity = 107/202 (52.97%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 1   MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD 60
           M  +VSKLYCSS E V VVR RP V+NGGGFVVTD  +K+VF +DGCGVLG + EL+LRD
Sbjct: 1   MKAVVSKLYCSSMEEVMVVRRRPHVVNGGGFVVTDYKEKIVFKIDGCGVLGTKGELVLRD 60

Query: 61  GKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPK-SCLPVKHDVGIKI 120
                LLL+  KGG+ +ALS H  W+ +  DYQGS K VF+L+ PK SC  +   + I  
Sbjct: 61  SDGNDLLLIHKKGGVVQALSIHNKWKGYSYDYQGSPKPVFTLRDPKHSCFSITSSIRI-- 120

Query: 121 NTKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGI 180
                V   +  F++ GYFP + CSI+DS+GNV+AQ+   +  G   S++IY V  KP +
Sbjct: 121 ----SVGPGNCYFDVKGYFPDRDCSIVDSKGNVIAQV--KEWIG---SRDIYKVVTKPSV 180

Query: 181 DQAFVVGVIAILDNIYGESTSC 202
           D+AFV GVIA+LD IYGESTSC
Sbjct: 181 DKAFVFGVIAVLDYIYGESTSC 191

[Close]

BLAST of Csa1G597060.1 vs. Swiss-Prot
Match: LOR16_ARATH (Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640 PE=2 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-44
Identity = 96/205 (46.83%), Postives = 136/205 (66.34%), Query Frame = 1


Query: 3   PLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDGK 62
           P++S+ Y S SE V VVR RP ++NGGGFVV++  Q VVF VDGCGVLG + +L+LR+G 
Sbjct: 11  PVLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGD 70

Query: 63  REALLLLRGKGGIFEALSF-HKMWRAFKCDYQGSKKVVFSLKRPK-SCLPVKHDVGIKIN 122
              LLL+R  GGI +AL+  H  W  F  D +G++++VF+LK PK SCL     + I ++
Sbjct: 71  GNDLLLIRKMGGIVQALNMVHNKWEGFGYDNEGTERLVFTLKDPKDSCLVQNSSIKILVH 130

Query: 123 TKPK--VSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEK--SSKNIYYVSIK 182
            KP    ST++   EI G F  + C+I+DS G  +A++   K+  E   + K++Y+V +K
Sbjct: 131 GKPPKISSTRNNYVEIKGSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIVK 190

Query: 183 PGIDQAFVVGVIAILDNIYGESTSC 202
           P +DQ+F+VG+IAILD I+GEST C
Sbjct: 191 PNVDQSFIVGLIAILDYIHGESTIC 215

[Close]

BLAST of Csa1G597060.1 vs. Swiss-Prot
Match: LOR5_ARATH (Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 54/199 (27.14%), Postives = 91/199 (45.73%), Query Frame = 1


Query: 4   LVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKED--ELILRDG 63
           LV   +    E    VR       G GF V DC   +VF VD  G     D  E++L D 
Sbjct: 6   LVDDEFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDA 65

Query: 64  KREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKINT 123
               LL LR K       S  + W  +  +    +K +F ++R  S +  ++ V +++  
Sbjct: 66  HGRCLLTLRRKRP-----SLRRRWEGYLGERSDGQKPIFGVRR--SSIIGRNSVTVEVYG 125

Query: 124 KPKVSTKDWDFEISGYFPGKKCSIIDSQGN-VVAQIGTNKKAGEKS--SKNIYYVSIKPG 183
             + S    ++ I G F  + C++++++    VA+I     A       K+++ +++KPG
Sbjct: 126 DYQCS----EYLIEGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPG 185

Query: 184 IDQAFVVGVIAILDNIYGE 198
            D AF +G++ +LD IYG+
Sbjct: 186 FDGAFAMGLVLVLDQIYGD 193

[Close]

BLAST of Csa1G597060.1 vs. Swiss-Prot
Match: LOR12_ARATH (Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11
Identity = 51/197 (25.89%), Postives = 85/197 (43.15%), Query Frame = 1


Query: 4   LVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKE-DELILRDGK 63
           +V K Y    +    V        G GF   DC   ++F VD  G   ++ DE++L D  
Sbjct: 20  VVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDAT 79

Query: 64  REALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKINTK 123
            + LL ++ K       + H+ W  F  +    +K +FS++R         +V +   T 
Sbjct: 80  GKCLLTVKRKRP-----TLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTG 139

Query: 124 PKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKS--SKNIYYVSIKPGID 183
                   ++ I G F  + C I D++   VA+I     A       ++++ + IKPG D
Sbjct: 140 E-------EYIIDGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFD 199

Query: 184 QAFVVGVIAILDNIYGE 198
            AF +G++ +LD I G+
Sbjct: 200 GAFAMGLVVVLDQINGD 204

[Close]

BLAST of Csa1G597060.1 vs. Swiss-Prot
Match: LOR10_ARATH (Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 7.3e-08
Identity = 50/202 (24.75%), Postives = 92/202 (45.54%), Query Frame = 1


Query: 4   LVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDGKR 63
           +VS  +C+   +   +  +   +  G F VTD +  ++F V    +    D+ IL D   
Sbjct: 3   IVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKE-PLFSISDKRILLDAYD 62

Query: 64  EALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPK--SCLPVKHDVGIKINT 123
             +L LR        +S H  W  ++        ++++LKR      +  K D+ +  N 
Sbjct: 63  TPILTLREN-----KVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNK 122

Query: 124 KPKVSTKDWDFEISGYFPGKKCSIIDSQGN-VVAQIGTNKKAGEKS---SKNIYYVSIKP 183
           + K+     DF + G +  + C +   + + +VAQ+  +KK   +S    K+ + V++ P
Sbjct: 123 EMKIC----DFHVKGSWIDRSCVVYAGKSDAIVAQM--HKKHTAQSILIGKSNFSVTVYP 182

Query: 184 GIDQAFVVGVIAILDNIYGEST 200
            +D AF+V +I ILD+I  E +
Sbjct: 183 NVDFAFIVSLIVILDDINREDS 192

[Close]

BLAST of Csa1G597060.1 vs. TrEMBL
Match: A0A0A0LWZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G597060 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 5.5e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD 60
           MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD
Sbjct: 1   MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD 60

Query: 61  GKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKIN 120
           GKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKIN
Sbjct: 61  GKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKIN 120

Query: 121 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGID 180
           TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGID
Sbjct: 121 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGID 180

Query: 181 QAFVVGVIAILDNIYGESTSC 202
           QAFVVGVIAILDNIYGESTSC
Sbjct: 181 QAFVVGVIAILDNIYGESTSC 201

[Close]

BLAST of Csa1G597060.1 vs. TrEMBL
Match: A0A0D2R4J3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G089100 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.6e-65
Identity = 125/202 (61.88%), Postives = 161/202 (79.70%), Query Frame = 1


Query: 2   IPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDG 61
           +P++SKLYCSSS+VV  VR RP V+NGGGFVVTDC Q VVF VDGCGVLG + EL+LRDG
Sbjct: 8   MPVISKLYCSSSQVVLAVRRRPHVVNGGGFVVTDCSQMVVFRVDGCGVLGTKGELVLRDG 67

Query: 62  KREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRP-KSCLPVKHDVGIKIN 121
             +ALLL+R KGG+ EALS HK W+ +  DY+GS+K+VF+LK P +SCL   ++  I+I+
Sbjct: 68  NGDALLLIRRKGGMVEALSIHKKWKGYSFDYEGSQKLVFTLKEPARSCL--SNNNAIRIS 127

Query: 122 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGE-KSSKNIYYVSIKPGI 181
           T+PK S+K  ++EI+GYFP +KCSIIDS GN+VAQ+G  K+  E  +SK++Y V +KPG+
Sbjct: 128 TEPKSSSKQCEYEINGYFPDRKCSIIDSTGNLVAQVGVKKEVEELMASKDVYQVVVKPGV 187

Query: 182 DQAFVVGVIAILDNIYGESTSC 202
           DQAFV GVIA+LD IYGEST C
Sbjct: 188 DQAFVFGVIAVLDYIYGESTRC 207

[Close]

BLAST of Csa1G597060.1 vs. TrEMBL
Match: U5G7K5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s14320g PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.5e-65
Identity = 124/202 (61.39%), Postives = 157/202 (77.72%), Query Frame = 1


Query: 2   IPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDG 61
           +P++SKLYCSSS+ V VVR RP V++GGGFVVTDC QKVVF VDGCGV G E ELILRD 
Sbjct: 11  MPIISKLYCSSSQAVLVVRKRPHVVSGGGFVVTDCSQKVVFRVDGCGVSGSEGELILRDS 70

Query: 62  KREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPK-SCLPVKHDVGIKIN 121
             EALLL+R KGG+ +ALS H+ W+ +  DY+GS+K+VFSLK P  SCL  K+   I+++
Sbjct: 71  SGEALLLIRRKGGMVQALSIHRKWKGYTFDYEGSQKLVFSLKEPNFSCLVRKN--AIRVS 130

Query: 122 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGE-KSSKNIYYVSIKPGI 181
           T+P+ S KDWDFEI GYFP + CSI+DS GN+VAQIG NK+  +  ++K++Y V ++PGI
Sbjct: 131 TEPRRSNKDWDFEIKGYFPDRSCSIVDSLGNIVAQIGINKEEDQLMANKDLYNVVVRPGI 190

Query: 182 DQAFVVGVIAILDNIYGESTSC 202
           DQ F  GVIA+LD IYGEST C
Sbjct: 191 DQVFTFGVIAVLDYIYGESTRC 210

[Close]

BLAST of Csa1G597060.1 vs. TrEMBL
Match: A0A0B0MSZ6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_25520 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.7e-65
Identity = 125/202 (61.88%), Postives = 160/202 (79.21%), Query Frame = 1


Query: 2   IPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDG 61
           +P++SKLYCSSS+VV  VR RP V+NGGGFVV DC Q VVF VDGCGVLG + EL+LRDG
Sbjct: 8   MPVISKLYCSSSQVVLAVRRRPHVVNGGGFVVMDCSQMVVFRVDGCGVLGTKGELVLRDG 67

Query: 62  KREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRP-KSCLPVKHDVGIKIN 121
             +ALLL+R KGG+ EALS HK W+ +  DY+GS+K+VF+LK P +SCL   ++  I+I+
Sbjct: 68  NGDALLLIRRKGGMVEALSIHKKWKGYSFDYEGSQKLVFTLKEPARSCL--ANNNAIRIS 127

Query: 122 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGE-KSSKNIYYVSIKPGI 181
           T+PK S+K  ++EI+GYFP +KCSIIDS GNVVAQ+G  K+  E  +SK++Y V ++PGI
Sbjct: 128 TEPKSSSKQCEYEINGYFPDRKCSIIDSTGNVVAQVGVKKEVEELMASKDVYQVVVRPGI 187

Query: 182 DQAFVVGVIAILDNIYGESTSC 202
           DQAFV GVIA+LD IYGEST C
Sbjct: 188 DQAFVFGVIAVLDYIYGESTRC 207

[Close]

BLAST of Csa1G597060.1 vs. TrEMBL
Match: A0A151RMK2_CAJCA (UPF0706 protein At5g01750 family OS=Cajanus cajan GN=KK1_034843 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.8e-64
Identity = 126/204 (61.76%), Postives = 162/204 (79.41%), Query Frame = 1


Query: 1   MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCD-QKVVFSVDGCGVLGKEDELILR 60
           MIP++SKLYCSSS+ V  VR RP V+NGGGFVVTDC  Q+VVF VDGCG+ G + +LILR
Sbjct: 3   MIPIISKLYCSSSQTVLEVRKRPHVVNGGGFVVTDCSGQRVVFRVDGCGIHGTKGQLILR 62

Query: 61  DGKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKI 120
           DG+ +ALLL+R KGG+ EALS +K WR +  DY+G + +VFSLK P SCL VK++ GI+I
Sbjct: 63  DGEGDALLLIRRKGGMVEALSIYKKWRGYSLDYEGLQNLVFSLKEPNSCL-VKNN-GIRI 122

Query: 121 NTKPK-VSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGE-KSSKNIYYVSIKP 180
           +++PK  S K WDFEI GYFP + CSI+D +GNV+AQ+G NK+  +  +SK++Y+V +KP
Sbjct: 123 SSEPKAASNKGWDFEIRGYFPDRSCSIVDIRGNVIAQVGVNKEVEKLMASKDLYHVVVKP 182

Query: 181 GIDQAFVVGVIAILDNIYGESTSC 202
           G+DQAFV GVIAILD IYGEST C
Sbjct: 183 GMDQAFVFGVIAILDYIYGESTYC 204

[Close]

BLAST of Csa1G597060.1 vs. TAIR10
Match: AT2G05910.1 (AT2G05910.1 Protein of unknown function (DUF567))

HSP 1 Score: 204.9 bits (520), Expect = 4.6e-53
Identity = 107/202 (52.97%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 1   MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD 60
           M  +VSKLYCSS E V VVR RP V+NGGGFVVTD  +K+VF +DGCGVLG + EL+LRD
Sbjct: 1   MKAVVSKLYCSSMEEVMVVRRRPHVVNGGGFVVTDYKEKIVFKIDGCGVLGTKGELVLRD 60

Query: 61  GKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPK-SCLPVKHDVGIKI 120
                LLL+  KGG+ +ALS H  W+ +  DYQGS K VF+L+ PK SC  +   + I  
Sbjct: 61  SDGNDLLLIHKKGGVVQALSIHNKWKGYSYDYQGSPKPVFTLRDPKHSCFSITSSIRI-- 120

Query: 121 NTKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGI 180
                V   +  F++ GYFP + CSI+DS+GNV+AQ+   +  G   S++IY V  KP +
Sbjct: 121 ----SVGPGNCYFDVKGYFPDRDCSIVDSKGNVIAQV--KEWIG---SRDIYKVVTKPSV 180

Query: 181 DQAFVVGVIAILDNIYGESTSC 202
           D+AFV GVIA+LD IYGESTSC
Sbjct: 181 DKAFVFGVIAVLDYIYGESTSC 191

[Close]

BLAST of Csa1G597060.1 vs. TAIR10
Match: AT5G20640.1 (AT5G20640.1 Protein of unknown function (DUF567))

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-45
Identity = 96/205 (46.83%), Postives = 136/205 (66.34%), Query Frame = 1


Query: 3   PLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDGK 62
           P++S+ Y S SE V VVR RP ++NGGGFVV++  Q VVF VDGCGVLG + +L+LR+G 
Sbjct: 11  PVLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGD 70

Query: 63  REALLLLRGKGGIFEALSF-HKMWRAFKCDYQGSKKVVFSLKRPK-SCLPVKHDVGIKIN 122
              LLL+R  GGI +AL+  H  W  F  D +G++++VF+LK PK SCL     + I ++
Sbjct: 71  GNDLLLIRKMGGIVQALNMVHNKWEGFGYDNEGTERLVFTLKDPKDSCLVQNSSIKILVH 130

Query: 123 TKPK--VSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEK--SSKNIYYVSIK 182
            KP    ST++   EI G F  + C+I+DS G  +A++   K+  E   + K++Y+V +K
Sbjct: 131 GKPPKISSTRNNYVEIKGSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIVK 190

Query: 183 PGIDQAFVVGVIAILDNIYGESTSC 202
           P +DQ+F+VG+IAILD I+GEST C
Sbjct: 191 PNVDQSFIVGLIAILDYIHGESTIC 215

[Close]

BLAST of Csa1G597060.1 vs. TAIR10
Match: AT1G80120.1 (AT1G80120.1 Protein of unknown function (DUF567))

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 54/199 (27.14%), Postives = 91/199 (45.73%), Query Frame = 1


Query: 4   LVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKED--ELILRDG 63
           LV   +    E    VR       G GF V DC   +VF VD  G     D  E++L D 
Sbjct: 6   LVDDEFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDA 65

Query: 64  KREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKINT 123
               LL LR K       S  + W  +  +    +K +F ++R  S +  ++ V +++  
Sbjct: 66  HGRCLLTLRRKRP-----SLRRRWEGYLGERSDGQKPIFGVRR--SSIIGRNSVTVEVYG 125

Query: 124 KPKVSTKDWDFEISGYFPGKKCSIIDSQGN-VVAQIGTNKKAGEKS--SKNIYYVSIKPG 183
             + S    ++ I G F  + C++++++    VA+I     A       K+++ +++KPG
Sbjct: 126 DYQCS----EYLIEGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPG 185

Query: 184 IDQAFVVGVIAILDNIYGE 198
            D AF +G++ +LD IYG+
Sbjct: 186 FDGAFAMGLVLVLDQIYGD 193

[Close]

BLAST of Csa1G597060.1 vs. TAIR10
Match: AT3G15810.1 (AT3G15810.1 Protein of unknown function (DUF567))

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 51/197 (25.89%), Postives = 85/197 (43.15%), Query Frame = 1


Query: 4   LVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKE-DELILRDGK 63
           +V K Y    +    V        G GF   DC   ++F VD  G   ++ DE++L D  
Sbjct: 20  VVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDAT 79

Query: 64  REALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKINTK 123
            + LL ++ K       + H+ W  F  +    +K +FS++R         +V +   T 
Sbjct: 80  GKCLLTVKRKRP-----TLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTG 139

Query: 124 PKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKS--SKNIYYVSIKPGID 183
                   ++ I G F  + C I D++   VA+I     A       ++++ + IKPG D
Sbjct: 140 E-------EYIIDGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFD 199

Query: 184 QAFVVGVIAILDNIYGE 198
            AF +G++ +LD I G+
Sbjct: 200 GAFAMGLVVVLDQINGD 204

[Close]

BLAST of Csa1G597060.1 vs. TAIR10
Match: AT3G11740.1 (AT3G11740.1 Protein of unknown function (DUF567))

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09
Identity = 50/202 (24.75%), Postives = 92/202 (45.54%), Query Frame = 1


Query: 4   LVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDGKR 63
           +VS  +C+   +   +  +   +  G F VTD +  ++F V    +    D+ IL D   
Sbjct: 3   IVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKE-PLFSISDKRILLDAYD 62

Query: 64  EALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPK--SCLPVKHDVGIKINT 123
             +L LR        +S H  W  ++        ++++LKR      +  K D+ +  N 
Sbjct: 63  TPILTLREN-----KVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNK 122

Query: 124 KPKVSTKDWDFEISGYFPGKKCSIIDSQGN-VVAQIGTNKKAGEKS---SKNIYYVSIKP 183
           + K+     DF + G +  + C +   + + +VAQ+  +KK   +S    K+ + V++ P
Sbjct: 123 EMKIC----DFHVKGSWIDRSCVVYAGKSDAIVAQM--HKKHTAQSILIGKSNFSVTVYP 182

Query: 184 GIDQAFVVGVIAILDNIYGEST 200
            +D AF+V +I ILD+I  E +
Sbjct: 183 NVDFAFIVSLIVILDDINREDS 192

[Close]

BLAST of Csa1G597060.1 vs. NCBI nr
Match: gi|778663155|ref|XP_011660026.1| (PREDICTED: protein LURP-one-related 6-like [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 7.8e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD 60
           MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD
Sbjct: 1   MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD 60

Query: 61  GKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKIN 120
           GKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKIN
Sbjct: 61  GKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKIN 120

Query: 121 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGID 180
           TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGID
Sbjct: 121 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGID 180

Query: 181 QAFVVGVIAILDNIYGESTSC 202
           QAFVVGVIAILDNIYGESTSC
Sbjct: 181 QAFVVGVIAILDNIYGESTSC 201

[Close]

BLAST of Csa1G597060.1 vs. NCBI nr
Match: gi|659100120|ref|XP_008450937.1| (PREDICTED: protein LURP-one-related 6-like [Cucumis melo])

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104
Identity = 191/201 (95.02%), Postives = 197/201 (98.01%), Query Frame = 1


Query: 1   MIPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD 60
           MIPLVSKLYCSSSEVVFVVRTRP VINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD
Sbjct: 1   MIPLVSKLYCSSSEVVFVVRTRPHVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRD 60

Query: 61  GKREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKIN 120
           GKR+ALLLLRGKGGIFEALSFHKMWRA+K D+QGSKKVVFSLKRPKSCLPVK+DVGIKIN
Sbjct: 61  GKRDALLLLRGKGGIFEALSFHKMWRAYKYDFQGSKKVVFSLKRPKSCLPVKNDVGIKIN 120

Query: 121 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGEKSSKNIYYVSIKPGID 180
           TKPKVSTKDWDFEI+GYFPGKKCSIIDSQGNVVAQIGTNKKAGE  SK+IYYVSIKPGID
Sbjct: 121 TKPKVSTKDWDFEINGYFPGKKCSIIDSQGNVVAQIGTNKKAGEMLSKDIYYVSIKPGID 180

Query: 181 QAFVVGVIAILDNIYGESTSC 202
           QAFVVGVIAILDNIYGESTSC
Sbjct: 181 QAFVVGVIAILDNIYGESTSC 201

[Close]

BLAST of Csa1G597060.1 vs. NCBI nr
Match: gi|743893482|ref|XP_011039975.1| (PREDICTED: protein LURP-one-related 6 [Populus euphratica])

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65
Identity = 122/201 (60.70%), Postives = 159/201 (79.10%), Query Frame = 1


Query: 2   IPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDG 61
           +P++SKLYCSSS+VV VVR RP V++GGGFVVTDC QKVVF VDGCGV+G E ELILRD 
Sbjct: 11  MPIISKLYCSSSQVVLVVRKRPHVVSGGGFVVTDCSQKVVFRVDGCGVIGTEGELILRDS 70

Query: 62  KREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPKSCLPVKHDVGIKINT 121
             EALLL+R KGG+ +ALS H+ W+ +  DY+GS+K+VFSLK PK    V+++  I+++T
Sbjct: 71  IGEALLLIRRKGGMVQALSIHRKWKGYTYDYEGSQKLVFSLKEPKFSCLVRNN-AIRVST 130

Query: 122 KPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGE-KSSKNIYYVSIKPGID 181
           +P+ S KDWDF I GYFP + CSI+DS GN+VAQIG NK+A +  ++K+ Y+V ++PG+D
Sbjct: 131 EPRRSNKDWDFAIKGYFPDRSCSIVDSSGNIVAQIGINKEADQLMANKDFYHVVVRPGMD 190

Query: 182 QAFVVGVIAILDNIYGESTSC 202
           Q F  GVIA+LD IYGEST C
Sbjct: 191 QVFTFGVIAVLDYIYGESTRC 210

[Close]

BLAST of Csa1G597060.1 vs. NCBI nr
Match: gi|823237860|ref|XP_012451577.1| (PREDICTED: protein LURP-one-related 6 [Gossypium raimondii])

HSP 1 Score: 257.3 bits (656), Expect = 2.2e-65
Identity = 125/202 (61.88%), Postives = 161/202 (79.70%), Query Frame = 1


Query: 2   IPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDG 61
           +P++SKLYCSSS+VV  VR RP V+NGGGFVVTDC Q VVF VDGCGVLG + EL+LRDG
Sbjct: 8   MPVISKLYCSSSQVVLAVRRRPHVVNGGGFVVTDCSQMVVFRVDGCGVLGTKGELVLRDG 67

Query: 62  KREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRP-KSCLPVKHDVGIKIN 121
             +ALLL+R KGG+ EALS HK W+ +  DY+GS+K+VF+LK P +SCL   ++  I+I+
Sbjct: 68  NGDALLLIRRKGGMVEALSIHKKWKGYSFDYEGSQKLVFTLKEPARSCL--SNNNAIRIS 127

Query: 122 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGE-KSSKNIYYVSIKPGI 181
           T+PK S+K  ++EI+GYFP +KCSIIDS GN+VAQ+G  K+  E  +SK++Y V +KPG+
Sbjct: 128 TEPKSSSKQCEYEINGYFPDRKCSIIDSTGNLVAQVGVKKEVEELMASKDVYQVVVKPGV 187

Query: 182 DQAFVVGVIAILDNIYGESTSC 202
           DQAFV GVIA+LD IYGEST C
Sbjct: 188 DQAFVFGVIAVLDYIYGESTRC 207

[Close]

BLAST of Csa1G597060.1 vs. NCBI nr
Match: gi|566176375|ref|XP_006381613.1| (hypothetical protein POPTR_0006s14320g [Populus trichocarpa])

HSP 1 Score: 256.1 bits (653), Expect = 5.0e-65
Identity = 124/202 (61.39%), Postives = 157/202 (77.72%), Query Frame = 1


Query: 2   IPLVSKLYCSSSEVVFVVRTRPQVINGGGFVVTDCDQKVVFSVDGCGVLGKEDELILRDG 61
           +P++SKLYCSSS+ V VVR RP V++GGGFVVTDC QKVVF VDGCGV G E ELILRD 
Sbjct: 11  MPIISKLYCSSSQAVLVVRKRPHVVSGGGFVVTDCSQKVVFRVDGCGVSGSEGELILRDS 70

Query: 62  KREALLLLRGKGGIFEALSFHKMWRAFKCDYQGSKKVVFSLKRPK-SCLPVKHDVGIKIN 121
             EALLL+R KGG+ +ALS H+ W+ +  DY+GS+K+VFSLK P  SCL  K+   I+++
Sbjct: 71  SGEALLLIRRKGGMVQALSIHRKWKGYTFDYEGSQKLVFSLKEPNFSCLVRKN--AIRVS 130

Query: 122 TKPKVSTKDWDFEISGYFPGKKCSIIDSQGNVVAQIGTNKKAGE-KSSKNIYYVSIKPGI 181
           T+P+ S KDWDFEI GYFP + CSI+DS GN+VAQIG NK+  +  ++K++Y V ++PGI
Sbjct: 131 TEPRRSNKDWDFEIKGYFPDRSCSIVDSLGNIVAQIGINKEEDQLMANKDLYNVVVRPGI 190

Query: 182 DQAFVVGVIAILDNIYGESTSC 202
           DQ F  GVIA+LD IYGEST C
Sbjct: 191 DQVFTFGVIAVLDYIYGESTRC 210

The following BLAST results are available for this feature:

BLAST of Csa1G597060.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LOR6_ARATH	8.2e-52	52.97	Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910 PE=2 SV=1	[more]
LOR16_ARATH	3.7e-44	46.83	Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640 PE=2 SV=2	[more]
LOR5_ARATH	2.2e-12	27.14	Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=2 SV=1	[more]
LOR12_ARATH	1.9e-11	25.89	Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1	[more]
LOR10_ARATH	7.3e-08	24.75	Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2	[more]

BLAST of Csa1G597060.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWZ5_CUCSA	5.5e-111	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G597060 PE=4 SV=1	[more]
A0A0D2R4J3_GOSRA	1.6e-65	61.88	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G089100 PE=4 SV=1	[more]
U5G7K5_POPTR	3.5e-65	61.39	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s14320g PE=4 SV=1	[more]
A0A0B0MSZ6_GOSAR	7.7e-65	61.88	Uncharacterized protein OS=Gossypium arboreum GN=F383_25520 PE=4 SV=1	[more]
A0A151RMK2_CAJCA	3.8e-64	61.76	UPF0706 protein At5g01750 family OS=Cajanus cajan GN=KK1_034843 PE=4 SV=1	[more]

BLAST of Csa1G597060.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G05910.1	4.6e-53	52.97	Protein of unknown function (DUF567)	[more]
AT5G20640.1	2.1e-45	46.83	Protein of unknown function (DUF567)	[more]
AT1G80120.1	1.2e-13	27.14	Protein of unknown function (DUF567)	[more]
AT3G15810.1	1.0e-12	25.89	Protein of unknown function (DUF567)	[more]
AT3G11740.1	4.1e-09	24.75	Protein of unknown function (DUF567)	[more]

BLAST of Csa1G597060.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778663155\|ref\|XP_011660026.1\|	7.8e-111	100.00	PREDICTED: protein LURP-one-related 6-like [Cucumis sativus]	[more]
gi\|659100120\|ref\|XP_008450937.1\|	1.1e-104	95.02	PREDICTED: protein LURP-one-related 6-like [Cucumis melo]	[more]
gi\|743893482\|ref\|XP_011039975.1\|	1.3e-65	60.70	PREDICTED: protein LURP-one-related 6 [Populus euphratica]	[more]
gi\|823237860\|ref\|XP_012451577.1\|	2.2e-65	61.88	PREDICTED: protein LURP-one-related 6 [Gossypium raimondii]	[more]
gi\|566176375\|ref\|XP_006381613.1\|	5.0e-65	61.39	hypothetical protein POPTR_0006s14320g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007612	LOR
IPR025659	Tubby-like_C

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G597060	Csa1G597060	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G597060.1	Csa1G597060.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G597060.1.cds1	Csa1G597060.1.cds1	CDS
Csa1G597060.1.cds2	Csa1G597060.1.cds2	CDS
Csa1G597060.1.cds3	Csa1G597060.1.cds3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G597060.1.utr3p1	Csa1G597060.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007612	LURP1-related protein domain	PFAM	PF04525	LOR	coord: 4..190 score: 3.0
IPR025659	Tubby C-terminal-like domain	unknown	SSF54518	Tubby C-terminal domain-like	coord: 3..195 score: 1.15
None	No IPR available	PANTHER	PTHR31087	FAMILY NOT NAMED	coord: 1..199 score: 4.8
None	No IPR available	PANTHER	PTHR31087:SF3	PROTEIN LURP-ONE-RELATED 16-RELATED	coord: 1..199 score: 4.8