Csa1G539330.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G539330.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Reticuline oxidase, putative; contains IPR012951 (Berberine/berberine-like)
Location	Chr1 : 19899345 .. 19900098 (+)
Sequence length	648

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGGTAATGCTTCAACTCAAGCAGGCATAACTAATCCAACGGCTAGATTCTTCTCATTATTTCTTGGAAGGGTAGATGAATTTATGGCAACTTTATCAACCACTTTCCCTGAGTTAGGTTTAATAAAACAAGATTGTGTCGAAGCGAGTTGGGTCGAATCAACCCTCATTATTCCCATTGGGGTTCAACCAATCGAGTCATTAGAACCTTTACTCAATAGAACACCCACCTATCTCGATAGCACAAAAATCAAATCCGACTATGTCAAGGAACCCATTTCTGAGGCTACAATCGAGGGCATATGGCAAAGATTAAAGGCTCAAGATATAGAAACATCTCAAGTCATATTTGTTCCTTATGGAGGGAGAATGAGTCAAATTTCTGAGTCAGAAACACCGTTTCCACATAGGGCTGGATATCTATTCAAGATTGCTTACGTTGTAGGGTGGAAGGACCAAAGTTTGAAGGCAAAGAAAACACACATAAGTTGGATACGAGAGATTTATGAGTACATGGCTCCTTTTGTTTCAAAATCACCGAGGGCTGCATATACTAATTATAGAGATCTTGATATTGGAAGTAACAACAAATATGGAAAAACAAGCTATAAACGAGCAAGCATTTGGGGGATGAAGTATTTTGGGGACAATTTTGATAGATTGGTATATGTTAAAACTAAGGTTGATCCTTATGATTTTTTTAGGCATGAACAAAGTATACCCACCCTCTAATATGCACGTAAGACTCAGTGCA

mRNA sequence

ATGGCAACTTTATCAACCACTTTCCCTGAGTTAGGTTTAATAAAACAAGATTGTGTCGAAGCGAGTTGGGTCGAATCAACCCTCATTATTCCCATTGGGGTTCAACCAATCGAGTCATTAGAACCTTTACTCAATAGAACACCCACCTATCTCGATAGCACAAAAATCAAATCCGACTATGTCAAGGAACCCATTTCTGAGGCTACAATCGAGGGCATATGGCAAAGATTAAAGGCTCAAGATATAGAAACATCTCAAGTCATATTTGTTCCTTATGGAGGGAGAATGAGTCAAATTTCTGAGTCAGAAACACCGTTTCCACATAGGGCTGGATATCTATTCAAGATTGCTTACGTTGTAGGGTGGAAGGACCAAAGTTTGAAGGCAAAGAAAACACACATAAGTTGGATACGAGAGATTTATGAGTACATGGCTCCTTTTGTTTCAAAATCACCGAGGGCTGCATATACTAATTATAGAGATCTTGATATTGGAAGTAACAACAAATATGGAAAAACAAGCTATAAACGAGCAAGCATTTGGGGGATGAAGTATTTTGGGGACAATTTTGATAGATTGGTATATGTTAAAACTAAGGTTGATCCTTATGATTTTTTTAGGCATGAACAAAGTATACCCACCCTCTAA

Coding sequence (CDS)

ATGGCAACTTTATCAACCACTTTCCCTGAGTTAGGTTTAATAAAACAAGATTGTGTCGAAGCGAGTTGGGTCGAATCAACCCTCATTATTCCCATTGGGGTTCAACCAATCGAGTCATTAGAACCTTTACTCAATAGAACACCCACCTATCTCGATAGCACAAAAATCAAATCCGACTATGTCAAGGAACCCATTTCTGAGGCTACAATCGAGGGCATATGGCAAAGATTAAAGGCTCAAGATATAGAAACATCTCAAGTCATATTTGTTCCTTATGGAGGGAGAATGAGTCAAATTTCTGAGTCAGAAACACCGTTTCCACATAGGGCTGGATATCTATTCAAGATTGCTTACGTTGTAGGGTGGAAGGACCAAAGTTTGAAGGCAAAGAAAACACACATAAGTTGGATACGAGAGATTTATGAGTACATGGCTCCTTTTGTTTCAAAATCACCGAGGGCTGCATATACTAATTATAGAGATCTTGATATTGGAAGTAACAACAAATATGGAAAAACAAGCTATAAACGAGCAAGCATTTGGGGGATGAAGTATTTTGGGGACAATTTTGATAGATTGGTATATGTTAAAACTAAGGTTGATCCTTATGATTTTTTTAGGCATGAACAAAGTATACCCACCCTCTAA

Protein sequence

MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDYVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVVGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASIWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL*

Homology

[Close]

BLAST of Csa1G539330.1 vs. Swiss-Prot
Match: CBDAS_CANSA (Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.0e-52
Identity = 107/216 (49.54%), Postives = 139/216 (64.35%), Query Frame = 1


Query: 4   LSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIES----LEPLLNRTPTYLDSTKIKSD 63
           ++ +FPELG+ K DC + SW++ T+I   GV   ++     E LL+R+     + KIK D
Sbjct: 327 MNKSFPELGIKKTDCRQLSWID-TIIFYSGVVNYDTDNFNKEILLDRSAGQNGAFKIKLD 386

Query: 64  YVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYV 123
           YVK+PI E+    I ++L  +DI        PYGG M +ISES  PFPHRAG L+++ Y+
Sbjct: 387 YVKKPIPESVFVQILEKLYEEDIGAGMYALYPYGGIMDEISESAIPFPHRAGILYELWYI 446

Query: 124 VGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS 183
             W+ Q    K  H++WIR IY +M P+VSK+PR AY NYRDLDIG N+     +Y +A 
Sbjct: 447 CSWEKQEDNEK--HLNWIRNIYNFMTPYVSKNPRLAYLNYRDLDIGINDPKNPNNYTQAR 506

Query: 184 IWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           IWG KYFG NFDRLV VKT VDP +FFR+EQSIP L
Sbjct: 507 IWGEKYFGKNFDRLVKVKTLVDPNNFFRNEQSIPPL 539

[Close]

BLAST of Csa1G539330.1 vs. Swiss-Prot
Match: CASL1_CANSA (Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.3e-51
Identity = 103/216 (47.69%), Postives = 138/216 (63.89%), Query Frame = 1


Query: 4   LSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESL----EPLLNRTPTYLDSTKIKSD 63
           ++ +FPELG+ K DC + SW++ T+I   GV    +     E LL+R+     +  IK D
Sbjct: 328 MNKSFPELGIKKTDCKQLSWID-TIIFYSGVVNYNTTYFKKEILLDRSGGRKAAFSIKLD 387

Query: 64  YVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYV 123
           YVK+PI E  +  I ++L  +D+     +F PYGG M +ISES  PFPHRAG +++I Y+
Sbjct: 388 YVKKPIPETAMVTILEKLYEEDVGVGMFVFYPYGGIMDEISESAIPFPHRAGIMYEIWYI 447

Query: 124 VGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS 183
             W+ Q    K  HI+WIR +Y +  P+VS++PR AY NYRDLD+G  N     +Y +A 
Sbjct: 448 ASWEKQEDNEK--HINWIRNVYNFTTPYVSQNPRMAYLNYRDLDLGKTNFESPNNYTQAR 507

Query: 184 IWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           IWG KYFG NF+RLV VKTKVDP +FFR+EQSIP L
Sbjct: 508 IWGEKYFGKNFNRLVKVKTKVDPDNFFRNEQSIPPL 540

[Close]

BLAST of Csa1G539330.1 vs. Swiss-Prot
Match: CASL2_CANSA (Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.5e-51
Identity = 103/216 (47.69%), Postives = 137/216 (63.43%), Query Frame = 1


Query: 4   LSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESL----EPLLNRTPTYLDSTKIKSD 63
           ++ +FPELG+ K DC + SW++ T+I   GV    +     E LL+R+     +  IK D
Sbjct: 328 MNKSFPELGIKKTDCKQLSWID-TIIFYSGVVNYNTTNFKKEILLDRSGGRKAAFSIKLD 387

Query: 64  YVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYV 123
           YVK+PI E  +  I ++L  +D+     +F PYGG M +ISES  PFPHRAG  ++I Y+
Sbjct: 388 YVKKPIPETAMVTILEKLYEEDVGVGMFVFYPYGGIMDEISESAIPFPHRAGITYEIWYI 447

Query: 124 VGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS 183
             W+ Q    K  HI+WIR +Y +  P+VS++PR AY NYRDLD+G  N     +Y +A 
Sbjct: 448 ASWEKQEDNEK--HINWIRNVYNFTTPYVSQNPRMAYLNYRDLDLGKTNFESPNNYTQAR 507

Query: 184 IWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           IWG KYFG NF+RLV VKTKVDP +FFR+EQSIP L
Sbjct: 508 IWGEKYFGKNFNRLVKVKTKVDPDNFFRNEQSIPPL 540

[Close]

BLAST of Csa1G539330.1 vs. Swiss-Prot
Match: THCAS_CANSA (Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.7e-51
Identity = 100/216 (46.30%), Postives = 136/216 (62.96%), Query Frame = 1


Query: 4   LSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESL----EPLLNRTPTYLDSTKIKSD 63
           ++ +FPELG+ K DC E SW+++T+    GV    +     E LL+R+     +  IK D
Sbjct: 328 MNKSFPELGIKKTDCKEFSWIDTTIFYS-GVVNFNTANFKKEILLDRSAGKKTAFSIKLD 387

Query: 64  YVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYV 123
           YVK+PI E  +  I ++L  +D+     +  PYGG M +ISES  PFPHRAG ++++ Y 
Sbjct: 388 YVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYT 447

Query: 124 VGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS 183
             W+ Q    K  HI+W+R +Y +  P+VS++PR AY NYRDLD+G  N     +Y +A 
Sbjct: 448 ASWEKQEDNEK--HINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQAR 507

Query: 184 IWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           IWG KYFG NF+RLV VKTKVDP +FFR+EQSIP L
Sbjct: 508 IWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPL 540

[Close]

BLAST of Csa1G539330.1 vs. Swiss-Prot
Match: THCAI_CANSA (Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-48
Identity = 97/216 (44.91%), Postives = 134/216 (62.04%), Query Frame = 1


Query: 4   LSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESL----EPLLNRTPTYLDSTKIKSD 63
           ++ +FPELG+ K DC E SW+++T+    GV    +     E LL+R+     +  IK D
Sbjct: 328 MNKSFPELGIKKTDCKELSWIDTTIFYS-GVVNYNTANFKKEILLDRSAGKKTAFSIKLD 387

Query: 64  YVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYV 123
           YVK+ I E  +  I ++L  +++     +  PYGG M +ISES  PFPHRAG ++++ Y 
Sbjct: 388 YVKKLIPETAMVKILEKLYEEEVGVGMYVLYPYGGIMDEISESAIPFPHRAGIMYELWYT 447

Query: 124 VGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS 183
             W+ Q    K  HI+W+R +Y +  P+VS++PR AY NYRDLD+G  N     +Y +A 
Sbjct: 448 ATWEKQEDNEK--HINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNPESPNNYTQAR 507

Query: 184 IWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           IWG KYFG NF+RLV VKTK DP +FFR+EQSIP L
Sbjct: 508 IWGEKYFGKNFNRLVKVKTKADPNNFFRNEQSIPPL 540

[Close]

BLAST of Csa1G539330.1 vs. TrEMBL
Match: A0A0A0LYL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G539330 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 8.1e-121
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60
           MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY
Sbjct: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60

Query: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120
           VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV
Sbjct: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120

Query: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180
           GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI
Sbjct: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180

Query: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL
Sbjct: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 215

[Close]

BLAST of Csa1G539330.1 vs. TrEMBL
Match: A0A0A0LVX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G539340 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 6.7e-99
Identity = 178/216 (82.41%), Postives = 195/216 (90.28%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGV-QPIESLEPLLNRTPTYLDSTKIKSD 60
           +ATLST FPELGLIKQDC+E  WVESTLII  GV Q IESLEPLLNRTPT LDSTKIKSD
Sbjct: 18  VATLSTKFPELGLIKQDCLEVRWVESTLIIASGVFQTIESLEPLLNRTPTTLDSTKIKSD 77

Query: 61  YVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYV 120
           Y+K+PI +A IEGIWQRLKA+DIE  Q +F PYG RMSQIS+SETPF HRAGYL++I Y+
Sbjct: 78  YIKKPIPKAAIEGIWQRLKARDIEGPQFVFAPYGARMSQISKSETPFSHRAGYLYQIGYM 137

Query: 121 VGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS 180
           VGWK Q+LKAK  HISWIRE+YEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYK+AS
Sbjct: 138 VGWKGQNLKAKNRHISWIRELYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKQAS 197

Query: 181 IWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           IWG+KYFG+NF RLVYVKTKVDP+DFFRHEQSIPTL
Sbjct: 198 IWGLKYFGNNFKRLVYVKTKVDPHDFFRHEQSIPTL 233

[Close]

BLAST of Csa1G539330.1 vs. TrEMBL
Match: A0A0A0LY37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G539350 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.8e-81
Identity = 145/216 (67.13%), Postives = 177/216 (81.94%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQ-PIESLEPLLNRTPTYLDSTKIKSD 60
           MA L+ TFP+LGL K++C E SW+ES +    G+Q   + LE LLNRTP    + K+KSD
Sbjct: 36  MAILNKTFPQLGLTKEECKETSWIESVVYTGNGLQIEDQPLEVLLNRTPLATGNIKMKSD 95

Query: 61  YVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYV 120
           YVKEPI +ATIE IWQRL++QDIE + ++FVPYGGRMSQIS+SE PF HRAG L+KI Y+
Sbjct: 96  YVKEPIPKATIEEIWQRLESQDIEGANLVFVPYGGRMSQISDSEIPFSHRAGNLYKIGYL 155

Query: 121 VGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS 180
            GW +  + A+KTH++WIR+IY YM PFVSKSPRAAY NYRDLDIGSN+KYGKTSYKRA 
Sbjct: 156 TGWFEPGVNAEKTHLNWIRDIYGYMTPFVSKSPRAAYVNYRDLDIGSNSKYGKTSYKRAR 215

Query: 181 IWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           +WG+KYFG+NF+R+VYVK KVDPY+FFRHEQSIP L
Sbjct: 216 VWGLKYFGNNFNRMVYVKNKVDPYNFFRHEQSIPVL 251

[Close]

BLAST of Csa1G539330.1 vs. TrEMBL
Match: A0A0A0LVL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G541380 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.2e-78
Identity = 135/215 (62.79%), Postives = 176/215 (81.86%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60
           +  L  TFP+LGL K+DC+E SW++S L++    Q  + LE LLNR+  Y + +KIKSDY
Sbjct: 10  LTILKPTFPQLGLTKEDCLEMSWIQSVLLMG-WFQKEDPLEVLLNRSRLYSEISKIKSDY 69

Query: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120
           VKE I    ++G+W+RLK+QD+E SQ++FVPYGG+MS++ +SETPF HR+ Y + + Y+ 
Sbjct: 70  VKEHIPMVAVKGMWERLKSQDVELSQIMFVPYGGKMSEVDDSETPFSHRSDYSYLVGYIA 129

Query: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180
            WK+ S++A+K+H++WIREIY+YM PFVSKSPRAAY NYRDLDIG+NNKYG+TSYKRA +
Sbjct: 130 KWKNGSVEAEKSHLNWIREIYDYMTPFVSKSPRAAYVNYRDLDIGTNNKYGRTSYKRARV 189

Query: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           WG+KYFG NFDRLV+VKTKVDP DFFRHEQSIPTL
Sbjct: 190 WGLKYFGKNFDRLVHVKTKVDPSDFFRHEQSIPTL 223

[Close]

BLAST of Csa1G539330.1 vs. TrEMBL
Match: A0A0A0LVF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537450 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.6e-76
Identity = 136/215 (63.26%), Postives = 170/215 (79.07%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60
           M  L+T FPEL L K++C E SW+++ L +  G    E  E LLNRTP +  STKIKSDY
Sbjct: 43  MPILNTNFPELNLSKEECSEMSWIKTVLTMA-GFPNQEPFEVLLNRTPPFGLSTKIKSDY 102

Query: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120
           +K+P+SEA  + + +RLKAQDIE +Q++F+PYGGRMS+ISESE PFPHRAG ++K+ Y V
Sbjct: 103 IKKPMSEAAFKTMLKRLKAQDIEVAQIMFIPYGGRMSEISESEIPFPHRAGNIYKLGYYV 162

Query: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180
            WKDQS+ A+K H++WIR+IY+YM PFVSKSPRA Y NYRDLDIG NNKYGK +Y  A +
Sbjct: 163 KWKDQSIDAEKRHLNWIRDIYDYMTPFVSKSPRATYCNYRDLDIGMNNKYGKATYSHARV 222

Query: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           WG KYFG NFDRLV++KTK+DP DFFR+EQSIP L
Sbjct: 223 WGFKYFGKNFDRLVHLKTKIDPNDFFRNEQSIPAL 256

[Close]

BLAST of Csa1G539330.1 vs. TAIR10
Match: AT5G44400.1 (AT5G44400.1 FAD-binding Berberine family protein)

HSP 1 Score: 211.1 bits (536), Expect = 6.9e-55
Identity = 105/215 (48.84%), Postives = 139/215 (64.65%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60
           M  +  +FPELGL  +DC+E SW+ES   I        +   L  ++P    S K KSD+
Sbjct: 325 MNVMKKSFPELGLTFKDCIEMSWLESIAYISGFPTHTPTNVLLQGKSPFPKVSFKAKSDF 384

Query: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120
           VK PI E+ ++GI+++L  +DI    +I+ PYGG M++I ES+ PFPHR G LFK+ YV 
Sbjct: 385 VKTPIPESGLQGIFKKLLKEDIPL--MIWNPYGGMMAKIPESQIPFPHRKGVLFKVQYVT 444

Query: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180
            W D   K    HI+WIR++Y YM P+VS +PR AY NYRDLD+G N K  KT  K+A +
Sbjct: 445 SWLDSD-KRPSRHINWIRDLYSYMTPYVSSNPREAYVNYRDLDLGRNTKDVKTCIKQAQV 504

Query: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           WG  YF +NF+RL+ +K KVDP +FFRHEQSIP +
Sbjct: 505 WGANYFKNNFNRLMMIKAKVDPENFFRHEQSIPPM 536

[Close]

BLAST of Csa1G539330.1 vs. TAIR10
Match: AT5G44440.1 (AT5G44440.1 FAD-binding Berberine family protein)

HSP 1 Score: 208.4 bits (529), Expect = 4.5e-54
Identity = 107/219 (48.86%), Postives = 142/219 (64.84%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLII---PIGVQPIESLEPLLNRTPTYLDSTKIK 60
           +A +   FPELGL K+ C E SW+ES L     P G    ESL  L NR  T L S K K
Sbjct: 314 LALMEEKFPELGLEKEGCEEMSWIESVLWFADFPKG----ESLGVLTNRERTSL-SFKGK 373

Query: 61  SDYVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIA 120
            D+V+EPI EA I+ IW+RL+A +    ++I  P+GG+MS+++E ETPFPHR G L++I 
Sbjct: 374 DDFVQEPIPEAAIQEIWRRLEAPEARLGKIILTPFGGKMSEMAEYETPFPHRGGNLYEIQ 433

Query: 121 YVVGWKDQSLKAKKT---HISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTS 180
           YV  W+++  K K     ++ W+  +YE+M P+VSKSPR AY N++D+D+G      KT 
Sbjct: 434 YVAYWREEEDKNKTETDKYLKWVDSVYEFMTPYVSKSPRGAYVNFKDMDLGMYLGKKKTK 493

Query: 181 YKRASIWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIP 214
           Y+    WG+KYF +NF+RLV VKT+VDP DFF  EQSIP
Sbjct: 494 YEEGKSWGVKYFKNNFERLVRVKTRVDPTDFFCDEQSIP 527

[Close]

BLAST of Csa1G539330.1 vs. TAIR10
Match: AT5G44380.1 (AT5G44380.1 FAD-binding Berberine family protein)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-53
Identity = 110/218 (50.46%), Postives = 136/218 (62.39%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLI---IPIGVQPIESLEPLLNRTPTYLDSTKIK 60
           +  +   FPELGL ++DC E SW+E+ L     P G  PIE L  L  ++P   D  K  
Sbjct: 328 LKVMEKAFPELGLTQKDCTEMSWIEAALFHGGFPTG-SPIEILLQL--KSPLGKDYFKAT 387

Query: 61  SDYVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIA 120
           SD+VKEPI    ++GI++RL   +  T+ + + PYGG MS+I ES  PFPHR G LFKI 
Sbjct: 388 SDFVKEPIPVIGLKGIFKRLIEGN--TTFLNWTPYGGMMSKIPESAIPFPHRNGTLFKIL 447

Query: 121 YVVGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKR 180
           Y   W +   K     I+WI+EIY YMAP+VS +PR AY NYRDLD G N    K ++  
Sbjct: 448 YYANWLEND-KTSSRKINWIKEIYNYMAPYVSSNPRQAYVNYRDLDFGQNKNNAKVNFIE 507

Query: 181 ASIWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           A IWG KYF  NFDRLV +KTKVDP +FFRHEQSIP +
Sbjct: 508 AKIWGPKYFKGNFDRLVKIKTKVDPENFFRHEQSIPPM 539

[Close]

BLAST of Csa1G539330.1 vs. TAIR10
Match: AT1G30760.1 (AT1G30760.1 FAD-binding Berberine family protein)

HSP 1 Score: 202.2 bits (513), Expect = 3.2e-52
Identity = 104/214 (48.60%), Postives = 139/214 (64.95%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60
           +  +  +FP+LGL K+DC+E SW++S + I  G       E LL+    + +  K KSDY
Sbjct: 327 LQVMQRSFPQLGLTKKDCLETSWIKSVMYIA-GFPSTAPSEALLDGKSLFKNYFKAKSDY 386

Query: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120
           V+EPI    +EG+W++L  +D  +   I+ PYGG M++I E+ETPFPHR+G LFKI ++ 
Sbjct: 387 VEEPIPVEGLEGLWEKLLEED--SPLTIWNPYGGMMAKIPETETPFPHRSGTLFKIQWLT 446

Query: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180
            W+D      K H+ W+RE+Y YM  +VSKSPR+AY NYRDLD+G N   GK S  R   
Sbjct: 447 LWQDGKTSEAK-HMGWMREMYSYMEQYVSKSPRSAYVNYRDLDLGMN---GKGSDARE-- 506

Query: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPT 215
           WG +YF  NF+RLV +K K DP +FFRHEQSIPT
Sbjct: 507 WGNRYFKGNFERLVEIKAKFDPENFFRHEQSIPT 531

[Close]

BLAST of Csa1G539330.1 vs. TAIR10
Match: AT5G44360.1 (AT5G44360.1 FAD-binding Berberine family protein)

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-51
Identity = 101/213 (47.42%), Postives = 137/213 (64.32%), Query Frame = 1


Query: 4   LSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDST-KIKSDYVK 63
           ++  FPELGL  QDC E +W++S  I+    +  + LE LL+R   Y D   K KSD+VK
Sbjct: 323 MNQKFPELGLTFQDCSEMTWIDS--IMYFNWKKGQPLETLLDRGQRYNDLYFKAKSDFVK 382

Query: 64  EPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVVGW 123
            PI E  +EGIW R    ++E+  +I  P GG+M +I E+ETPFPHR G L+ I Y+V W
Sbjct: 383 NPIPEIGLEGIWTRF--HEVESPIMIMEPLGGKMYEIGETETPFPHRRGNLYNIQYMVKW 442

Query: 124 KDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASIWG 183
           + + +   + H++W+R +Y YM  +VS SPR AY NYRDLD+G N     TS++ A +WG
Sbjct: 443 RLKDIGVMEKHVTWMRLLYRYMRVYVSASPRGAYLNYRDLDLGMNRGV-NTSFEDAKLWG 502

Query: 184 MKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
            +YFG NF RL  VK K+DP +FFR+EQS+P L
Sbjct: 503 FRYFGSNFKRLAIVKGKIDPTNFFRNEQSVPPL 530

[Close]

BLAST of Csa1G539330.1 vs. NCBI nr
Match: gi|700210841|gb|KGN65937.1| (hypothetical protein Csa_1G539330 [Cucumis sativus])

HSP 1 Score: 441.0 bits (1133), Expect = 1.2e-120
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60
           MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY
Sbjct: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60

Query: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120
           VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV
Sbjct: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120

Query: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180
           GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI
Sbjct: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180

Query: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL
Sbjct: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 215

[Close]

BLAST of Csa1G539330.1 vs. NCBI nr
Match: gi|659068687|ref|XP_008445684.1| (PREDICTED: tetrahydrocannabinolic acid synthase-like [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 4.3e-107
Identity = 190/215 (88.37%), Postives = 201/215 (93.49%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60
           + TLST FPELGLIKQDCVEASWVESTLIIPIGVQPIE+LEPLLNRT T LDSTKIKSDY
Sbjct: 322 VTTLSTIFPELGLIKQDCVEASWVESTLIIPIGVQPIETLEPLLNRTLTTLDSTKIKSDY 381

Query: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120
           + EPI  A I+ IWQRLK QDIETSQ++FVPYGGRMSQISESETPF HRA YLFKI YVV
Sbjct: 382 ITEPIPVAAIKDIWQRLKTQDIETSQLVFVPYGGRMSQISESETPFSHRARYLFKIGYVV 441

Query: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180
           GWKDQSLKAKK HISW+RE+YEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS+
Sbjct: 442 GWKDQSLKAKKRHISWLREVYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASV 501

Query: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           WG+KYFG+NFDRLVYVKTKVDPYDFFRHEQSIPTL
Sbjct: 502 WGLKYFGNNFDRLVYVKTKVDPYDFFRHEQSIPTL 536

[Close]

BLAST of Csa1G539330.1 vs. NCBI nr
Match: gi|778661997|ref|XP_004151192.2| (PREDICTED: cannabidiolic acid synthase-like [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 4.6e-101
Identity = 178/215 (82.79%), Postives = 196/215 (91.16%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGVQPIESLEPLLNRTPTYLDSTKIKSDY 60
           +ATLSTTFPELGLIKQDC+E SW+ESTLI   GVQ +ESLEPLLNRTP+ L++ KIKSDY
Sbjct: 323 VATLSTTFPELGLIKQDCIETSWIESTLIASTGVQTVESLEPLLNRTPSNLENEKIKSDY 382

Query: 61  VKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYVV 120
           +KEPIS ATIEGIWQRLKAQDIETSQ+IF+PYGGRMSQISESETPF HR G L+KI Y++
Sbjct: 383 IKEPISIATIEGIWQRLKAQDIETSQLIFIPYGGRMSQISESETPFSHRVGNLYKIGYIL 442

Query: 121 GWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRASI 180
           GWK+QSLKAKK HISWIREIYEYM PFVSKSPR+AY NYRDLDIG N KYGKTS K+ASI
Sbjct: 443 GWKEQSLKAKKKHISWIREIYEYMTPFVSKSPRSAYANYRDLDIGVNKKYGKTSVKQASI 502

Query: 181 WGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           WG+KYFG+NF RLVYVKTKVDPYDFFRHEQSIPTL
Sbjct: 503 WGLKYFGNNFKRLVYVKTKVDPYDFFRHEQSIPTL 537

[Close]

BLAST of Csa1G539330.1 vs. NCBI nr
Match: gi|700210842|gb|KGN65938.1| (hypothetical protein Csa_1G539340 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 9.6e-99
Identity = 178/216 (82.41%), Postives = 195/216 (90.28%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGV-QPIESLEPLLNRTPTYLDSTKIKSD 60
           +ATLST FPELGLIKQDC+E  WVESTLII  GV Q IESLEPLLNRTPT LDSTKIKSD
Sbjct: 18  VATLSTKFPELGLIKQDCLEVRWVESTLIIASGVFQTIESLEPLLNRTPTTLDSTKIKSD 77

Query: 61  YVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYV 120
           Y+K+PI +A IEGIWQRLKA+DIE  Q +F PYG RMSQIS+SETPF HRAGYL++I Y+
Sbjct: 78  YIKKPIPKAAIEGIWQRLKARDIEGPQFVFAPYGARMSQISKSETPFSHRAGYLYQIGYM 137

Query: 121 VGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS 180
           VGWK Q+LKAK  HISWIRE+YEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYK+AS
Sbjct: 138 VGWKGQNLKAKNRHISWIRELYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKQAS 197

Query: 181 IWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           IWG+KYFG+NF RLVYVKTKVDP+DFFRHEQSIPTL
Sbjct: 198 IWGLKYFGNNFKRLVYVKTKVDPHDFFRHEQSIPTL 233

[Close]

BLAST of Csa1G539330.1 vs. NCBI nr
Match: gi|778662000|ref|XP_011659198.1| (PREDICTED: cannabidiolic acid synthase-like 1 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 9.6e-99
Identity = 178/216 (82.41%), Postives = 195/216 (90.28%), Query Frame = 1


Query: 1   MATLSTTFPELGLIKQDCVEASWVESTLIIPIGV-QPIESLEPLLNRTPTYLDSTKIKSD 60
           +ATLST FPELGLIKQDC+E  WVESTLII  GV Q IESLEPLLNRTPT LDSTKIKSD
Sbjct: 327 VATLSTKFPELGLIKQDCLEVRWVESTLIIASGVFQTIESLEPLLNRTPTTLDSTKIKSD 386

Query: 61  YVKEPISEATIEGIWQRLKAQDIETSQVIFVPYGGRMSQISESETPFPHRAGYLFKIAYV 120
           Y+K+PI +A IEGIWQRLKA+DIE  Q +F PYG RMSQIS+SETPF HRAGYL++I Y+
Sbjct: 387 YIKKPIPKAAIEGIWQRLKARDIEGPQFVFAPYGARMSQISKSETPFSHRAGYLYQIGYM 446

Query: 121 VGWKDQSLKAKKTHISWIREIYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKRAS 180
           VGWK Q+LKAK  HISWIRE+YEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYK+AS
Sbjct: 447 VGWKGQNLKAKNRHISWIRELYEYMAPFVSKSPRAAYTNYRDLDIGSNNKYGKTSYKQAS 506

Query: 181 IWGMKYFGDNFDRLVYVKTKVDPYDFFRHEQSIPTL 216
           IWG+KYFG+NF RLVYVKTKVDP+DFFRHEQSIPTL
Sbjct: 507 IWGLKYFGNNFKRLVYVKTKVDPHDFFRHEQSIPTL 542

The following BLAST results are available for this feature:

BLAST of Csa1G539330.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CBDAS_CANSA	4.0e-52	49.54	Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1	[more]
CASL1_CANSA	3.3e-51	47.69	Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1	[more]
CASL2_CANSA	7.5e-51	47.69	Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1	[more]
THCAS_CANSA	9.7e-51	46.30	Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1	[more]
THCAI_CANSA	2.0e-48	44.91	Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1	[more]

BLAST of Csa1G539330.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYL7_CUCSA	8.1e-121	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G539330 PE=4 SV=1	[more]
A0A0A0LVX6_CUCSA	6.7e-99	82.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G539340 PE=4 SV=1	[more]
A0A0A0LY37_CUCSA	4.8e-81	67.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G539350 PE=4 SV=1	[more]
A0A0A0LVL2_CUCSA	2.2e-78	62.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G541380 PE=4 SV=1	[more]
A0A0A0LVF6_CUCSA	3.6e-76	63.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537450 PE=4 SV=1	[more]

BLAST of Csa1G539330.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G44400.1	6.9e-55	48.84	FAD-binding Berberine family protein	[more]
AT5G44440.1	4.5e-54	48.86	FAD-binding Berberine family protein	[more]
AT5G44380.1	1.3e-53	50.46	FAD-binding Berberine family protein	[more]
AT1G30760.1	3.2e-52	48.60	FAD-binding Berberine family protein	[more]
AT5G44360.1	1.6e-51	47.42	FAD-binding Berberine family protein	[more]

BLAST of Csa1G539330.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700210841\|gb\|KGN65937.1\|	1.2e-120	100.00	hypothetical protein Csa_1G539330 [Cucumis sativus]	[more]
gi\|659068687\|ref\|XP_008445684.1\|	4.3e-107	88.37	PREDICTED: tetrahydrocannabinolic acid synthase-like [Cucumis melo]	[more]
gi\|778661997\|ref\|XP_004151192.2\|	4.6e-101	82.79	PREDICTED: cannabidiolic acid synthase-like [Cucumis sativus]	[more]
gi\|700210842\|gb\|KGN65938.1\|	9.6e-99	82.41	hypothetical protein Csa_1G539340 [Cucumis sativus]	[more]
gi\|778662000\|ref\|XP_011659198.1\|	9.6e-99	82.41	PREDICTED: cannabidiolic acid synthase-like 1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR012951	BBE

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity
GO:0050660	flavin adenine dinucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G539330	Csa1G539330	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G539330.1	Csa1G539330.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G539330.1.utr5p1	Csa1G539330.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G539330.1.cds1	Csa1G539330.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G539330.1.utr3p1	Csa1G539330.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012951	Berberine/berberine-like	PFAM	PF08031	BBE	coord: 155..213 score: 1.6
None	No IPR available	PANTHER	PTHR32448	FAMILY NOT NAMED	coord: 1..215 score: 1.5E