Csa1G435200.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa1G435200.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDNA polymerase epsilon subunit B, putative; contains IPR007185 (DNA polymerase alpha/epsilon, subunit B)
LocationChr1 : 15969211 .. 15971757 (+)
Sequence length903
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAGAACTTGTTTCATTGAAGTGTTTCAAATACTCTTCATCGTATTAATTATGTGTTTTTCCTGGGTGTCTATTTAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTGTATCCTCTTGTTTTGGTCTATAAAATGAATTTCTAAATAAGCATTGGAAAGGAGGGCTATAGTTGACATTTTATTGTGCTGAATTTTGGTTATTAAAGGGGTGTAAGTGCAATCAAGTTTTCCTTAATCATCAATAGCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGTGACAAATAGCCTTTTTATGTTTCATGTGTATTGTGTGTCTATAAAGCTTGGTGGCCTTATTAAAACTTTTTCATGTGGTAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGGTATGTATTATCGCAATTGTTTCTGTGTTATTGAGATGAGTTCAGTGCAATAATGAGTTCAAATGTGCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGTTTGTGTTGTTATCTGTTAAGAAACTCCTCACTATGCACTATATTTTCTGAGATTTTATTTACATGGAGTTTATAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGTGAATACTTTGATTGCTGACTTGTAACCTTAATGGTGCTTCTAGTCTTGACTATAATATTATGTTGCATGAGGGGCTTCACTTCTACAGCTTACTTGTGAAATAAATCATTTTTTTTATTTGGAATAATTTAATAGATTTAAAGGCCAGTGTTATTGGTATGGATTTAGTTATCCAGTTTTTTTAACTATTGAATTTAGGGGGGAAAAGGTCATTTATTAACAAGTGAGAACAAAGCTACGATGAGCAAAATAAATGGTCCTCTACAAGGCGTTCTATTTTTTACTTAATTAAGAGGAATTAACCGATTTTAAGATGAGATTATGCTCCCTTTGGTGAATGCGATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTTTTACTCCATAGTGGTGGATAATTGTCATACTTGAATGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGTTTACTCCATAGTGGTGGATAATTGTCATACTTGAATGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATGTGAATTTTTTTTCTTTGCCTTTTACATTTCTGTTTTTTTTTTCTAGTTCTCTGTTTATGGATTCTACACCCTTTCGGATATTTATATATGAAGGCCTTAAGTTTTCATGATTCTCTTGCAGCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGGTACTTACCCATATCTCAATCTAGTGTTTTAATCGATCTATTTATACATCCAAAGTTGGATGTTCTTTCTCTCCACACCTGGAGACAGATAATGAATGAGGGTTCCGATGAATGATAAGTGTTCTACTGCGATTGAACTTTCAGATTATTATATCAATCTTTATTTGGTTTATGCAGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAAATTATTACAAAGTTTAGGCCAGATTCAAGCGGGCACACTCCTTTATGCAGCATAACAATTCGTTTAGAACATGAATGAGAAATCCTATAGCATCATTCTTTATCTTGGGAGTTGCACTATTCTTTATCTTGGGAGTTGCACTGGTGCACACCAAGAATTACCACTAGCTAGAATCTAACTCTATGCCGAAGAAGGCTTTTGTGATTTCTGTTTAGGAAAAAGTCGAAACATTGATGCAGAGTTAGGAATCTTTTTAGTTGTACAATTGTAAATCCGAATAACATATATTTTCTTTTAGATTATGTACTTTCTAACCGTGGACGATGGATTGATCAACAACTAACCTAAAAGTTCTTCAC

mRNA sequence

ATGTTCAGAACTTGTTTCATTGAAGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAA

Coding sequence (CDS)

ATGTTCAGAACTTGTTTCATTGAAGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAA

Protein sequence

MFRTCFIEVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL*
Homology
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BLAST of Csa1G435200.1 vs. Swiss-Prot
Match: DPB2_ARATH (DNA polymerase epsilon subunit B OS=Arabidopsis thaliana GN=DPB2 PE=1 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 2.2e-133
Identity = 223/293 (76.11%), Postives = 253/293 (86.35%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +V+TCGFPPLE+R K+LK  +  DFFG G L KEE ++ ADLE++AVND FVILSDIWLD
Sbjct: 234 QVITCGFPPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLD 293

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
            EE M KLET+LDGFE+VE VPSLFV MGNFCS PCN++F S+SSLR QFGKLG+MI  H
Sbjct: 294 DEEVMRKLETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNH 353

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
           PRL E+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  + NAIFSSNPCRV+FY QEI
Sbjct: 354 PRLKENSRFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKFYNQEI 413

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFRQDLLYRMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPIIWNYDH L 
Sbjct: 414 VFFRQDLLYRMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPIIWNYDHALR 473

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 301
           LYPTPH IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Sbjct: 474 LYPTPHTIVLGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSAL 526

[Close]
BLAST of Csa1G435200.1 vs. Swiss-Prot
Match: DPOE2_CHICK (DNA polymerase epsilon subunit 2 OS=Gallus gallus GN=POLE2 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50
Identity = 109/290 (37.59%), Postives = 160/290 (55.17%), Query Frame = 1 

Query: 13  GFPPLEERGKSLKLLAGQDFFGD-GVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEA 72
           GFPP E    +       +FFG       + + +   LE +  + MFV LSD+WLD  E 
Sbjct: 241 GFPPTEPSATTRAFYGNINFFGGPSSASVKASAKLKQLEDENEDAMFVFLSDVWLDQAEV 300

Query: 73  MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 132
           + KL T+  G+ +    P+ F   GNF S P     N   SL+     L  +I  +P ++
Sbjct: 301 LEKLHTMFSGYSSAP--PTCFFFCGNFSSAP--YGKNQIQSLKGSLKALADIICEYPSIH 360

Query: 133 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFR 192
           + S+F+F+PGP+D GP +VLPR  L + +T+E +  V  ++F++NPCRV++ TQEI+ FR
Sbjct: 361 KSSRFVFVPGPEDPGPGSVLPRPPLAENITQEFRQLVPFSVFTTNPCRVQYCTQEIIIFR 420

Query: 193 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 252
           +DL+ +M R+C+  PS+  + D   H V TI  Q HL PLPL + P+ W YD+ L +YP 
Sbjct: 421 EDLVNKMCRNCVRFPSS--SMDIPNHFVKTILSQGHLTPLPLYVSPVYWAYDYALRVYPV 480

Query: 253 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQEVELSAL 301
           P ++V+ D+        T   C NPGSF     +F  + P N+ VE S L
Sbjct: 481 PDMLVIADKYDPFTVTNTDCLCINPGSFPRSGFSFKVFYPSNKTVEDSKL 524

[Close]
BLAST of Csa1G435200.1 vs. Swiss-Prot
Match: DPOE2_DICDI (DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum GN=pole2 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.4e-49
Identity = 102/284 (35.92%), Postives = 166/284 (58.45%), Query Frame = 1 

Query: 15  PPLEERGKSLKLLAGQDFFGDGVLPKEETLRRA-DLEKKAVNDMFVILSDIWLDSEEAMG 74
           PP EER ++LK L   D FG+   P+++T+ +    EK+  ++  + LSD+WLDSE  M 
Sbjct: 230 PPTEERCETLKFLQNIDMFGER--PQKKTMEQLIKYEKEKEDNSILFLSDVWLDSERVME 289

Query: 75  KLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEH 134
           +L+ +  G+++    P   +LMGNF  HP  +   +   L+  F +L  +I  +P +++ 
Sbjct: 290 RLDYLFGGYKDCP--PFAMILMGNFTEHP--LINGTQYQLKKYFNQLAMVIQKYPNIHQF 349

Query: 135 SKFLFIPGPDDAGPS--TVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFR 194
           ++F+F+PGP D   S   +LP+  +     ++    +  + F++NPCR+R+ +QEI+ FR
Sbjct: 350 TQFIFVPGPTDPTGSLLNILPKFPISNVFIKDFISLIPKSTFTTNPCRIRYCSQEIIIFR 409

Query: 195 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 254
            DL  +MRR C++ PS  ++ D  +HL+  I   SHLC L L  +PI WNYDH + +YP 
Sbjct: 410 DDLTNKMRRHCILEPS--QSCDISQHLIELICSNSHLCNLTLEDKPIYWNYDHAMSVYPL 469

Query: 255 PHVIVLGDRSKQ-QAFKYTGITCFNPGSFTNDSTFVAYRPCNQE 295
           P ++V+GD+S Q +  +  G    NP SF+ D +F  Y P N++
Sbjct: 470 PDLLVIGDKSNQYEHSRADGTYSMNPSSFSTDYSFAHYIPANKQ 505

[Close]
BLAST of Csa1G435200.1 vs. Swiss-Prot
Match: DPOE2_BOVIN (DNA polymerase epsilon subunit 2 OS=Bos taurus GN=POLE2 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.8e-47
Identity = 103/290 (35.52%), Postives = 156/290 (53.79%), Query Frame = 1 

Query: 13  GFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRA-DLEKKAVNDMFVILSDIWLDSEEA 72
           GFPP E    +       +FFG       +T  +   LE +  + MFV +SD+WLD  E 
Sbjct: 241 GFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISDVWLDQVEV 300

Query: 73  MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 132
           + KL  +  G+      P+ F+L GNF S P     N   +L+     L  +I  +P ++
Sbjct: 301 LEKLHIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICGYPNIH 360

Query: 133 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFR 192
           + S+F+F+PGP+D G  ++LPR    + +T E +  V  ++F++NPCR+++ TQEI+ FR
Sbjct: 361 QSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTTNPCRIQYCTQEIIVFR 420

Query: 193 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 252
           +DL+ +M R+C+  PS+    D   H V T+  Q HL PLPL + P+ W YD+ L +YP 
Sbjct: 421 EDLVNKMCRNCVRFPSS--NLDIPNHFVKTVLSQGHLTPLPLYVCPVYWAYDYALRVYPV 480

Query: 253 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQEVELSAL 301
           P ++V+ D+        T   C NPGSF     +F  + P N+ VE S L
Sbjct: 481 PDLLVIADKYDPFTLTNTECLCINPGSFPRSGFSFKVFYPSNKVVEDSKL 524

[Close]
BLAST of Csa1G435200.1 vs. Swiss-Prot
Match: DPOE2_MOUSE (DNA polymerase epsilon subunit 2 OS=Mus musculus GN=Pole2 PE=2 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 5.3e-47
Identity = 103/290 (35.52%), Postives = 158/290 (54.48%), Query Frame = 1 

Query: 13  GFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRA-DLEKKAVNDMFVILSDIWLDSEEA 72
           GFPP E    +       +FFG       +T  +   LE +  + MFVI+SD+WLD  + 
Sbjct: 241 GFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKLRQLEDENKDAMFVIVSDVWLDQVQV 300

Query: 73  MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 132
           + K   +  G+      P+ F+L GNF S P     N   +L+     L  +I  +P ++
Sbjct: 301 LEKFHVMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKSLADIICEYPSIH 360

Query: 133 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFR 192
           + S+F+F+PGP+D G  ++LPR  L + +T+E +  V  ++F++NPCR+++ TQEI+ FR
Sbjct: 361 QSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQYCTQEIIIFR 420

Query: 193 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 252
           +DL+ +M R+C+  PS+  + D   H V TI  Q HL PLPL + P+ W YD+ L +YP 
Sbjct: 421 EDLVNKMCRNCVRFPSS--SLDIPTHFVKTILSQGHLAPLPLYVCPVHWAYDYTLRVYPV 480

Query: 253 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQEVELSAL 301
           P ++V+ D+        T   C NPGSF      F  + P ++ VE S L
Sbjct: 481 PDLLVIADKYDPFTVTNTDCLCINPGSFPRSGFAFKVFYPSSKTVEDSKL 524

[Close]
BLAST of Csa1G435200.1 vs. TrEMBL
Match: A0A0A0LX08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435200 PE=4 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 2.7e-175
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1 

Query: 1   MFRTCFIEVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVI 60
           MFRTCFIEVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVI
Sbjct: 1   MFRTCFIEVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVI 60

Query: 61  LSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKL 120
           LSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKL
Sbjct: 61  LSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKL 120

Query: 121 GKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRV 180
           GKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRV
Sbjct: 121 GKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRV 180

Query: 181 RFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIW 240
           RFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIW
Sbjct: 181 RFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIW 240

Query: 241 NYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 300
           NYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 241 NYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 300

[Close]
BLAST of Csa1G435200.1 vs. TrEMBL
Match: A0A067DVL2_CITSI (DNA polymerase epsilon subunit 2 OS=Citrus sinensis GN=CISIN_1g009713mg PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 2.2e-148
Identity = 248/293 (84.64%), Postives = 272/293 (92.83%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +V+TCGFPPLE+R +SLKLLAG DFFG G L KE+TLR ADLEK+A NDMFVILSDIWLD
Sbjct: 236 QVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLD 295

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
           +EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAAH
Sbjct: 296 NEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
           PRL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEELQ ++ NAIFSSNPCR++FYTQEI
Sbjct: 356 PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRIKFYTQEI 415

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFRQDLLYRMRRSCLIPPS EET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH LH
Sbjct: 416 VFFRQDLLYRMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSLH 475

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 301
           LYPTPH IVL D+S+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEVE SAL
Sbjct: 476 LYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL 528

[Close]
BLAST of Csa1G435200.1 vs. TrEMBL
Match: A0A061FWB8_THECC (DNA polymerase epsilon subunit B2 isoform 1 OS=Theobroma cacao GN=TCM_013360 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 8.3e-148
Identity = 245/288 (85.07%), Postives = 269/288 (93.40%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +V+TCGFPPLE+R KS K+LAG DFFG G L KEETLR ADLEK+AVNDMFVILSDIWLD
Sbjct: 236 QVITCGFPPLEDRDKSFKILAGHDFFGGGTLTKEETLRLADLEKRAVNDMFVILSDIWLD 295

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
           +EE M KLET+L+GFE+VE+VPSLFVLMGNFCSHPCN++F+SFSSLRLQFGKLG+MI AH
Sbjct: 296 NEEVMEKLETVLNGFESVEIVPSLFVLMGNFCSHPCNLSFHSFSSLRLQFGKLGRMIEAH 355

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
           PRL E S+FLFIPGPDDAGPST LPRCALPKYLTEELQ HV NAIFS+NPCR++FYTQEI
Sbjct: 356 PRLKEQSRFLFIPGPDDAGPSTALPRCALPKYLTEELQKHVPNAIFSTNPCRIKFYTQEI 415

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFRQDLLYRMRRSCLIPPSTEET DPFEHLVATITHQSHLCPLPL +QPIIWNYDHCLH
Sbjct: 416 VFFRQDLLYRMRRSCLIPPSTEETDDPFEHLVATITHQSHLCPLPLFVQPIIWNYDHCLH 475

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEV 296
           LYPTPH I+LGDRS+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEV
Sbjct: 476 LYPTPHTIILGDRSEQKAFKYTGITCFNPGSFSDDSTFVAYRPCTQEV 523

[Close]
BLAST of Csa1G435200.1 vs. TrEMBL
Match: B9I4W5_POPTR (DNA polymerase epsilon subunit 2 OS=Populus trichocarpa GN=POPTR_0012s03640g PE=3 SV=2)

HSP 1 Score: 530.8 bits (1366), Expect = 1.1e-147
Identity = 246/293 (83.96%), Postives = 272/293 (92.83%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +V+TCGFPPLEER KSLK LA  DFFG G L KEETLR A+LEK+++NDMFVILSDIW+D
Sbjct: 226 QVITCGFPPLEERDKSLKSLAQHDFFGGGTLTKEETLRLAELEKRSLNDMFVILSDIWVD 285

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
           SEEAMGKLET+LDGFE+ EVVPSLFV MGNFCSHPCN++F+SFSSLR QFGKLG+MI AH
Sbjct: 286 SEEAMGKLETVLDGFESQEVVPSLFVFMGNFCSHPCNLSFHSFSSLRSQFGKLGQMIGAH 345

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
            RL EHS+F+FIPGP+DAGPSTVLPRC LPKYLTEELQ H+ NAIF+SNPCRV+FYTQEI
Sbjct: 346 QRLKEHSRFMFIPGPEDAGPSTVLPRCPLPKYLTEELQKHIPNAIFASNPCRVKFYTQEI 405

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFR DLLYRMRRSCL+PPSTEET DPFEHLVATITHQSHLCPLPL++QPIIWNYDHCLH
Sbjct: 406 VFFRHDLLYRMRRSCLMPPSTEETDDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLH 465

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 301
           LYP+PH IVLGDRS+Q+AFKYTGITCFNPGSF+NDSTFVAYRPC QEVELSAL
Sbjct: 466 LYPSPHTIVLGDRSEQKAFKYTGITCFNPGSFSNDSTFVAYRPCTQEVELSAL 518

[Close]
BLAST of Csa1G435200.1 vs. TrEMBL
Match: A0A0B0PPT4_GOSAR (DNA polymerase epsilon subunit 2 OS=Gossypium arboreum GN=F383_02352 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 1.1e-147
Identity = 248/293 (84.64%), Postives = 271/293 (92.49%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +V+TCGFPPLE R KSLK+LAG DFFG G L KEETLR ADLEK+AVNDMFVILSDIWLD
Sbjct: 210 QVITCGFPPLENRDKSLKVLAGHDFFGCGTLTKEETLRLADLEKRAVNDMFVILSDIWLD 269

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
           +E+ M KLET+L+GFENVE+VPSLFV MG+FCSHPCN++F+SFSSLR QFGKLG+MI AH
Sbjct: 270 NEQVMEKLETVLNGFENVEIVPSLFVFMGDFCSHPCNLSFHSFSSLRSQFGKLGRMIEAH 329

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
           PRL E SKFLFIPGP+D GPSTVLPRCALPKYLTEELQ HV NAIFSSNPCRV+FYTQE+
Sbjct: 330 PRLKEQSKFLFIPGPNDTGPSTVLPRCALPKYLTEELQKHVPNAIFSSNPCRVKFYTQEM 389

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFRQDLLYRMRRSCLIPPSTEET DPFEHLVATITHQSHLCPLPL +QPIIWNYDHCLH
Sbjct: 390 VFFRQDLLYRMRRSCLIPPSTEETDDPFEHLVATITHQSHLCPLPLFVQPIIWNYDHCLH 449

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 301
           LYPTPH IVLGDRS+Q+AFKYTGITCFNPGSF++DSTFVA+RPC QEVE SAL
Sbjct: 450 LYPTPHTIVLGDRSEQKAFKYTGITCFNPGSFSDDSTFVAFRPCTQEVEFSAL 502

[Close]
BLAST of Csa1G435200.1 vs. TAIR10
Match: AT5G22110.1 (AT5G22110.1 DNA polymerase epsilon subunit B2)

HSP 1 Score: 476.5 bits (1225), Expect = 1.2e-134
Identity = 223/293 (76.11%), Postives = 253/293 (86.35%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +V+TCGFPPLE+R K+LK  +  DFFG G L KEE ++ ADLE++AVND FVILSDIWLD
Sbjct: 234 QVITCGFPPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLD 293

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
            EE M KLET+LDGFE+VE VPSLFV MGNFCS PCN++F S+SSLR QFGKLG+MI  H
Sbjct: 294 DEEVMRKLETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNH 353

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
           PRL E+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  + NAIFSSNPCRV+FY QEI
Sbjct: 354 PRLKENSRFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKFYNQEI 413

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFRQDLLYRMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPIIWNYDH L 
Sbjct: 414 VFFRQDLLYRMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPIIWNYDHALR 473

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 301
           LYPTPH IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Sbjct: 474 LYPTPHTIVLGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSAL 526

[Close]
BLAST of Csa1G435200.1 vs. NCBI nr
Match: gi|700210428|gb|KGN65524.1| (hypothetical protein Csa_1G435200 [Cucumis sativus])

HSP 1 Score: 622.5 bits (1604), Expect = 3.9e-175
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1 

Query: 1   MFRTCFIEVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVI 60
           MFRTCFIEVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVI
Sbjct: 1   MFRTCFIEVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVI 60

Query: 61  LSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKL 120
           LSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKL
Sbjct: 61  LSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKL 120

Query: 121 GKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRV 180
           GKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRV
Sbjct: 121 GKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRV 180

Query: 181 RFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIW 240
           RFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIW
Sbjct: 181 RFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIW 240

Query: 241 NYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 300
           NYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 241 NYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 300

[Close]
BLAST of Csa1G435200.1 vs. NCBI nr
Match: gi|778660923|ref|XP_011657177.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus])

HSP 1 Score: 605.9 bits (1561), Expect = 3.8e-170
Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +VVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD
Sbjct: 236 QVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 295

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
           SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH
Sbjct: 296 SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 355

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
           PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI
Sbjct: 356 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 415

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH
Sbjct: 416 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 475

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 301
           LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 476 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 528

[Close]
BLAST of Csa1G435200.1 vs. NCBI nr
Match: gi|659066275|ref|XP_008463560.1| (PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo])

HSP 1 Score: 589.0 bits (1517), Expect = 4.8e-165
Identity = 284/293 (96.93%), Postives = 287/293 (97.95%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +VVTCGFPPLEER KSLKLLAGQDFFG GVLPKEETLR ADLEKKAVNDMFVILSDIWLD
Sbjct: 237 QVVTCGFPPLEERDKSLKLLAGQDFFGGGVLPKEETLRLADLEKKAVNDMFVILSDIWLD 296

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
           SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH
Sbjct: 297 SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 356

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
           PRLN+HSKF FIPGPDDAGPSTVLPRCALPKYLTEELQ+HV NA FSSNPCRVRFYTQEI
Sbjct: 357 PRLNKHSKFXFIPGPDDAGPSTVLPRCALPKYLTEELQVHVPNATFSSNPCRVRFYTQEI 416

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH
Sbjct: 417 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 476

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 301
           LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 477 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529

[Close]
BLAST of Csa1G435200.1 vs. NCBI nr
Match: gi|641823196|gb|KDO42631.1| (hypothetical protein CISIN_1g009713mg [Citrus sinensis])

HSP 1 Score: 533.1 bits (1372), Expect = 3.1e-148
Identity = 248/293 (84.64%), Postives = 272/293 (92.83%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +V+TCGFPPLE+R +SLKLLAG DFFG G L KE+TLR ADLEK+A NDMFVILSDIWLD
Sbjct: 236 QVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLD 295

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
           +EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAAH
Sbjct: 296 NEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
           PRL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEELQ ++ NAIFSSNPCR++FYTQEI
Sbjct: 356 PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRIKFYTQEI 415

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFRQDLLYRMRRSCLIPPS EET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH LH
Sbjct: 416 VFFRQDLLYRMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSLH 475

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 301
           LYPTPH IVL D+S+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEVE SAL
Sbjct: 476 LYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL 528

[Close]
BLAST of Csa1G435200.1 vs. NCBI nr
Match: gi|568848623|ref|XP_006478101.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Citrus sinensis])

HSP 1 Score: 533.1 bits (1372), Expect = 3.1e-148
Identity = 248/293 (84.64%), Postives = 272/293 (92.83%), Query Frame = 1 

Query: 8   EVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 67
           +V+TCGFPPLE+R +SLKLLAG DFFG G L KE+TLR ADLEK+A NDMFVILSDIWLD
Sbjct: 236 QVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLD 295

Query: 68  SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 127
           +EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAAH
Sbjct: 296 NEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355

Query: 128 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 187
           PRL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEELQ ++ NAIFSSNPCR++FYTQEI
Sbjct: 356 PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRIKFYTQEI 415

Query: 188 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 247
           VFFRQDLLYRMRRSCLIPPS EET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH LH
Sbjct: 416 VFFRQDLLYRMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSLH 475

Query: 248 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 301
           LYPTPH IVL D+S+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEVE SAL
Sbjct: 476 LYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL 528

The following BLAST results are available for this feature:
BLAST of Csa1G435200.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DPB2_ARATH2.2e-13376.11DNA polymerase epsilon subunit B OS=Arabidopsis thaliana GN=DPB2 PE=1 SV=1[more]
DPOE2_CHICK1.4e-5037.59DNA polymerase epsilon subunit 2 OS=Gallus gallus GN=POLE2 PE=2 SV=1[more]
DPOE2_DICDI4.4e-4935.92DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum GN=pole2 PE=3 SV=1[more]
DPOE2_BOVIN1.8e-4735.52DNA polymerase epsilon subunit 2 OS=Bos taurus GN=POLE2 PE=2 SV=1[more]
DPOE2_MOUSE5.3e-4735.52DNA polymerase epsilon subunit 2 OS=Mus musculus GN=Pole2 PE=2 SV=2[more]
BLAST of Csa1G435200.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX08_CUCSA2.7e-175100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435200 PE=4 SV=1[more]
A0A067DVL2_CITSI2.2e-14884.64DNA polymerase epsilon subunit 2 OS=Citrus sinensis GN=CISIN_1g009713mg PE=3 SV=... [more]
A0A061FWB8_THECC8.3e-14885.07DNA polymerase epsilon subunit B2 isoform 1 OS=Theobroma cacao GN=TCM_013360 PE=... [more]
B9I4W5_POPTR1.1e-14783.96DNA polymerase epsilon subunit 2 OS=Populus trichocarpa GN=POPTR_0012s03640g PE=... [more]
A0A0B0PPT4_GOSAR1.1e-14784.64DNA polymerase epsilon subunit 2 OS=Gossypium arboreum GN=F383_02352 PE=4 SV=1[more]
BLAST of Csa1G435200.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22110.11.2e-13476.11 DNA polymerase epsilon subunit B2[more]
BLAST of Csa1G435200.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210428|gb|KGN65524.1|3.9e-175100.00hypothetical protein Csa_1G435200 [Cucumis sativus][more]
gi|778660923|ref|XP_011657177.1|3.8e-17099.66PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus][more]
gi|659066275|ref|XP_008463560.1|4.8e-16596.93PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo][more]
gi|641823196|gb|KDO42631.1|3.1e-14884.64hypothetical protein CISIN_1g009713mg [Citrus sinensis][more]
gi|568848623|ref|XP_006478101.1|3.1e-14884.64PREDICTED: DNA polymerase epsilon subunit 2 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_alpha/epsilon_bsu
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003887DNA-directed DNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0006261 DNA-dependent DNA replication
cellular_component GO:0008622 epsilon DNA polymerase complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa1G435200Csa1G435200gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa1G435200.1Csa1G435200.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa1G435200.1.cds1Csa1G435200.1.cds1CDS
Csa1G435200.1.cds2Csa1G435200.1.cds2CDS
Csa1G435200.1.cds3Csa1G435200.1.cds3CDS
Csa1G435200.1.cds4Csa1G435200.1.cds4CDS
Csa1G435200.1.cds5Csa1G435200.1.cds5CDS
Csa1G435200.1.cds6Csa1G435200.1.cds6CDS
Csa1G435200.1.cds7Csa1G435200.1.cds7CDS
Csa1G435200.1.cds8Csa1G435200.1.cds8CDS
Csa1G435200.1.cds9Csa1G435200.1.cds9CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa1G435200.1.utr3p1Csa1G435200.1.utr3p1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007185DNA polymerase alpha/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 58..266
score: 9.5
NoneNo IPR availablePANTHERPTHR12708DNA POLYMERASE EPSILON SUBUNIT Bcoord: 9..300
score: 2.0E