Csa1G423130.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCCTTTTATCTTCCTTCTTCCACACAATCTCCATGGACGACACCTCCGAATCCAATCCCTTAACCTCTAAACGCAATCAACACGAAGACGATAACGATTTTGAATCCGACGACGAATCTCTCTCCTTCTCCGATCTTCCCATGGACAGAGAAAACTCCGACGCCCATACTCATCCCGATAGCTTCCGCAAGAATTCACGTAGGTCCTCCTCCGAACCTCTTGATCTCTTCGAATTCTTCACCGCTGGACTCATCACTTCCGAGATTTCTCCCGCAGAGGATTTGATCTTCTGCGGTAGATTGCTCCCTCTCAACAATGATCACTCTACGCGTATTACCGCCGATAAAAGTTCCTGGAAGGAAGAGATTAGTCGAAAACAAACTGTATTTCGAAAACGCTCAGAATCATTGTCCGGATTGCAGAGCTCTGTTTCTCGATCCAACAGTGCGAAATTCAATCTCAAACGGAATAGCCGATCGCTTGATTACCGTAGGCTGTATCGTCAATCAAATTCGATTTTCTCACCGACGGCTGAAATCGATCGTAATTGTTCGATCAAAACTGGTCTGAAGCCTGATTCACTGAACAAAAGGACCTCGTCGAAGCCGCGGTGGTATTTGTTAATGTTCGGAATGGTGAAGTTTCCAGCGGAGATGGAGCTTAGCGACATTAAAAGCAGACAAGTACGCCGGAGTTCGTCGACGCTTTTTCCAACAAACGAAAGCAAAAGTAAATATCACTGCGGTTGGAGCTCCGGCGAGGCGACTTGGAGGATACTTCGAGCGCTTAGCTGCAAGAACCACGCTAGTGTAGATGTAACGGCGTCGTTAACTGCCTAACGTATATTTTCACGTGGATAGCACGTGAGTGGCAGTTACATTATCATTGTTACTATATTGCCCTCGCTGATGTTGTGACATTCAAGTACCTCATGAAGGTTAGTTTGGTAATTTGATATTAAATATTCTTCACGTCCAAGGGAGGATAGTGTACAGTGGCGGAGCGTGGTTGATGATGGTGCGC ATGGACGACACCTCCGAATCCAATCCCTTAACCTCTAAACGCAATCAACACGAAGACGATAACGATTTTGAATCCGACGACGAATCTCTCTCCTTCTCCGATCTTCCCATGGACAGAGAAAACTCCGACGCCCATACTCATCCCGATAGCTTCCGCAAGAATTCACGTAGGTCCTCCTCCGAACCTCTTGATCTCTTCGAATTCTTCACCGCTGGACTCATCACTTCCGAGATTTCTCCCGCAGAGGATTTGATCTTCTGCGGTAGATTGCTCCCTCTCAACAATGATCACTCTACGCGTATTACCGCCGATAAAAGTTCCTGGAAGGAAGAGATTAGTCGAAAACAAACTGTATTTCGAAAACGCTCAGAATCATTGTCCGGATTGCAGAGCTCTGTTTCTCGATCCAACAGTGCGAAATTCAATCTCAAACGGAATAGCCGATCGCTTGATTACCGTAGGCTGTATCGTCAATCAAATTCGATTTTCTCACCGACGGCTGAAATCGATCGTAATTGTTCGATCAAAACTGGTCTGAAGCCTGATTCACTGAACAAAAGGACCTCGTCGAAGCCGCGGTGGTATTTGTTAATGTTCGGAATGGTGAAGTTTCCAGCGGAGATGGAGCTTAGCGACATTAAAAGCAGACAAGTACGCCGGAGTTCGTCGACGCTTTTTCCAACAAACGAAAGCAAAAGTAAATATCACTGCGGTTGGAGCTCCGGCGAGGCGACTTGGAGGATACTTCGAGCGCTTAGCTGCAAGAACCACGCTAGTGTAGATGTAACGGCGTCGTTAACTGCCTAA ATGGACGACACCTCCGAATCCAATCCCTTAACCTCTAAACGCAATCAACACGAAGACGATAACGATTTTGAATCCGACGACGAATCTCTCTCCTTCTCCGATCTTCCCATGGACAGAGAAAACTCCGACGCCCATACTCATCCCGATAGCTTCCGCAAGAATTCACGTAGGTCCTCCTCCGAACCTCTTGATCTCTTCGAATTCTTCACCGCTGGACTCATCACTTCCGAGATTTCTCCCGCAGAGGATTTGATCTTCTGCGGTAGATTGCTCCCTCTCAACAATGATCACTCTACGCGTATTACCGCCGATAAAAGTTCCTGGAAGGAAGAGATTAGTCGAAAACAAACTGTATTTCGAAAACGCTCAGAATCATTGTCCGGATTGCAGAGCTCTGTTTCTCGATCCAACAGTGCGAAATTCAATCTCAAACGGAATAGCCGATCGCTTGATTACCGTAGGCTGTATCGTCAATCAAATTCGATTTTCTCACCGACGGCTGAAATCGATCGTAATTGTTCGATCAAAACTGGTCTGAAGCCTGATTCACTGAACAAAAGGACCTCGTCGAAGCCGCGGTGGTATTTGTTAATGTTCGGAATGGTGAAGTTTCCAGCGGAGATGGAGCTTAGCGACATTAAAAGCAGACAAGTACGCCGGAGTTCGTCGACGCTTTTTCCAACAAACGAAAGCAAAAGTAAATATCACTGCGGTTGGAGCTCCGGCGAGGCGACTTGGAGGATACTTCGAGCGCTTAGCTGCAAGAACCACGCTAGTGTAGATGTAACGGCGTCGTTAACTGCCTAA MDDTSESNPLTSKRNQHEDDNDFESDDESLSFSDLPMDRENSDAHTHPDSFRKNSRRSSSEPLDLFEFFTAGLITSEISPAEDLIFCGRLLPLNNDHSTRITADKSSWKEEISRKQTVFRKRSESLSGLQSSVSRSNSAKFNLKRNSRSLDYRRLYRQSNSIFSPTAEIDRNCSIKTGLKPDSLNKRTSSKPRWYLLMFGMVKFPAEMELSDIKSRQVRRSSSTLFPTNESKSKYHCGWSSGEATWRILRALSCKNHASVDVTASLTA*
BLAST of Csa1G423130.1 vs. TrEMBL
Match: A0A0A0LU50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423130 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 1.0e-149 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1
BLAST of Csa1G423130.1 vs. TrEMBL
Match: F6GXG9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00900 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.8e-51 Identity = 131/245 (53.47%), Postives = 165/245 (67.35%), Query Frame = 1
BLAST of Csa1G423130.1 vs. TrEMBL
Match: B9N2Z7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s18380g PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.1e-42 Identity = 120/262 (45.80%), Postives = 162/262 (61.83%), Query Frame = 1
BLAST of Csa1G423130.1 vs. TrEMBL
Match: W9R2S2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012849 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 5.5e-42 Identity = 121/266 (45.49%), Postives = 164/266 (61.65%), Query Frame = 1
BLAST of Csa1G423130.1 vs. TrEMBL
Match: A0A059CLA9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00156 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.6e-41 Identity = 113/251 (45.02%), Postives = 155/251 (61.75%), Query Frame = 1
BLAST of Csa1G423130.1 vs. TAIR10
Match: AT4G30230.1 (AT4G30230.1 unknown protein) HSP 1 Score: 134.4 bits (337), Expect = 1.0e-31 Identity = 95/253 (37.55%), Postives = 139/253 (54.94%), Query Frame = 1
BLAST of Csa1G423130.1 vs. NCBI nr
Match: gi|778660738|ref|XP_011656822.1| (PREDICTED: uncharacterized protein LOC105435774 [Cucumis sativus]) HSP 1 Score: 537.3 bits (1383), Expect = 1.5e-149 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1
BLAST of Csa1G423130.1 vs. NCBI nr
Match: gi|659107303|ref|XP_008453606.1| (PREDICTED: uncharacterized protein LOC103494265 [Cucumis melo]) HSP 1 Score: 502.3 bits (1292), Expect = 5.3e-139 Identity = 255/268 (95.15%), Postives = 262/268 (97.76%), Query Frame = 1
BLAST of Csa1G423130.1 vs. NCBI nr
Match: gi|731408614|ref|XP_010656920.1| (PREDICTED: uncharacterized protein LOC104880802 [Vitis vinifera]) HSP 1 Score: 209.9 bits (533), Expect = 5.4e-51 Identity = 131/245 (53.47%), Postives = 165/245 (67.35%), Query Frame = 1
BLAST of Csa1G423130.1 vs. NCBI nr
Match: gi|645234191|ref|XP_008223699.1| (PREDICTED: uncharacterized protein LOC103323479 [Prunus mume]) HSP 1 Score: 204.1 bits (518), Expect = 3.0e-49 Identity = 118/251 (47.01%), Postives = 165/251 (65.74%), Query Frame = 1
BLAST of Csa1G423130.1 vs. NCBI nr
Match: gi|1009105376|ref|XP_015879338.1| (PREDICTED: uncharacterized protein LOC107415205 [Ziziphus jujuba]) HSP 1 Score: 193.0 bits (489), Expect = 6.9e-46 Identity = 125/265 (47.17%), Postives = 171/265 (64.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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