Csa1G059210.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G059210.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ankyrin repeat-containing protein; contains IPR020683 (Ankyrin repeat-containing domain)
Location	Chr1 : 6470466 .. 6471487 (-)
Sequence length	642

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGGCCAATATGGGAAGTTCAATAAAGAAAGATATTCCAATTATTGAACAAGGACTAACCATCCCTGAAGTCTGTGTCGAGGACGCAGCACCCAGACAATACAACAGTAAGTTCATCCATCTACATATTCTGTCCCTTATAATTCATGCCCTTCCTTAAATTTACACCCTCTCTTTCTACATTCTTATTACGAACTCCCCTAGTTTTTTTCAAAACAGATTCTACTATAATTGTTGCTGGATATATATTAATAATCTGTGAATTAAGATATTGCTAAATGGACTTTGTAAGTTTTATACAGATGAGAAATCAATATGTATATATTTTATAAAAATTGTGAAGTTTTTATATGAGATATTCGGGTTAAATAGAACACAATAATGTATTTTTTAAGAAAACATTTGTCAAAACCGATACCTTTCAAACTCCTTTATTATTGTTGTTGTTATTATATTCTGTTTATTTAGTATGTGTAGCAAAAACGGAGGAAGAAGACGGATTATCTCAAGAAGCTGATCGGTTAAGAAAAGCTGCTATAAAGGGCGACTGGAAGACTGCAAACTCTATATTTAGCAAATATCCGTTGGCTGTCAATTTGAAAATAGGCCCTTCTAAGACAACAGCGCTTCATATTGCTTCTGTTTGTCACCAATTTTCTTTTGTTGAAAAATTGGTAAAACTTACCTCTGGATCTGACTTAGCTAACAAAGTTGAAGGATTCACAGCTCTTAGTTTTGTCGCTGCTTCAGGAGTTGTAAGAATTGCTAAATTAATGGTTGACAAGAATCGCGAACTTCCAAACATCATTAATGATGATAAAACTTTCCCACTTTTAATGGCGGTAGTTTTCAAACGCAAAGACATGGTTTCCTTTCTCTTCCGCAAGATTAAATTTGAAGCTCTTGAGACTGGTGGACAAATTCAACTTCTCATTTGTACTCTCCTCGCTGATTATTATGGTTCTGATTTTCTAAATCCCTTGATATTATATTCAATATATATCATCAATAACTTAAGTTAA

mRNA sequence

ATGGGAAGTTCAATAAAGAAAGATATTCCAATTATTGAACAAGGACTAACCATCCCTGAAGTCTGTGTCGAGGACGCAGCACCCAGACAATACAACACAAAAACGGAGGAAGAAGACGGATTATCTCAAGAAGCTGATCGGTTAAGAAAAGCTGCTATAAAGGGCGACTGGAAGACTGCAAACTCTATATTTAGCAAATATCCGTTGGCTGTCAATTTGAAAATAGGCCCTTCTAAGACAACAGCGCTTCATATTGCTTCTGTTTGTCACCAATTTTCTTTTGTTGAAAAATTGGTAAAACTTACCTCTGGATCTGACTTAGCTAACAAAGTTGAAGGATTCACAGCTCTTAGTTTTGTCGCTGCTTCAGGAGTTGTAAGAATTGCTAAATTAATGGTTGACAAGAATCGCGAACTTCCAAACATCATTAATGATGATAAAACTTTCCCACTTTTAATGGCGGTAGTTTTCAAACGCAAAGACATGGTTTCCTTTCTCTTCCGCAAGATTAAATTTGAAGCTCTTGAGACTGGTGGACAAATTCAACTTCTCATTTGTACTCTCCTCGCTGATTATTATGGTTCTGATTTTCTAAATCCCTTGATATTATATTCAATATATATCATCAATAACTTAAGTTAA

Coding sequence (CDS)

ATGGGAAGTTCAATAAAGAAAGATATTCCAATTATTGAACAAGGACTAACCATCCCTGAAGTCTGTGTCGAGGACGCAGCACCCAGACAATACAACACAAAAACGGAGGAAGAAGACGGATTATCTCAAGAAGCTGATCGGTTAAGAAAAGCTGCTATAAAGGGCGACTGGAAGACTGCAAACTCTATATTTAGCAAATATCCGTTGGCTGTCAATTTGAAAATAGGCCCTTCTAAGACAACAGCGCTTCATATTGCTTCTGTTTGTCACCAATTTTCTTTTGTTGAAAAATTGGTAAAACTTACCTCTGGATCTGACTTAGCTAACAAAGTTGAAGGATTCACAGCTCTTAGTTTTGTCGCTGCTTCAGGAGTTGTAAGAATTGCTAAATTAATGGTTGACAAGAATCGCGAACTTCCAAACATCATTAATGATGATAAAACTTTCCCACTTTTAATGGCGGTAGTTTTCAAACGCAAAGACATGGTTTCCTTTCTCTTCCGCAAGATTAAATTTGAAGCTCTTGAGACTGGTGGACAAATTCAACTTCTCATTTGTACTCTCCTCGCTGATTATTATGGTTCTGATTTTCTAAATCCCTTGATATTATATTCAATATATATCATCAATAACTTAAGTTAA

Protein sequence

MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYNTKTEEEDGLSQEADRLRKAAIKGDWKTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTALSFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALETGGQIQLLICTLLADYYGSDFLNPLILYSIYIINNLS*

Homology

[Close]

BLAST of Csa1G059210.1 vs. TrEMBL
Match: A0A0A0LWZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059210 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.2e-113
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1


Query: 1   MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYNTKTEEEDGLSQEADRLRKAAIKGDWKTA 60
           MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYNTKTEEEDGLSQEADRLRKAAIKGDWKTA
Sbjct: 1   MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYNTKTEEEDGLSQEADRLRKAAIKGDWKTA 60

Query: 61  NSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTALSFV 120
           NSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTALSFV
Sbjct: 61  NSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTALSFV 120

Query: 121 AASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALETGGQ 180
           AASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALETGGQ
Sbjct: 121 AASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALETGGQ 180

Query: 181 IQLLICTLLADYYGSDFLNPLILYSIYIINNLS 214
           IQLLICTLLADYYGSDFLNPLILYSIYIINNLS
Sbjct: 181 IQLLICTLLADYYGSDFLNPLILYSIYIINNLS 213

[Close]

BLAST of Csa1G059210.1 vs. TrEMBL
Match: A0A0A0LRU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058660 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.3e-33
Identity = 90/177 (50.85%), Postives = 113/177 (63.84%), Query Frame = 1


Query: 19  PEVCVEDAAPRQYNTKTEEEDGLSQEADRLRKAAIKGDWKTANSIFSKYPLAVNLKIGPS 78
           P    E+ +   YNT+ ++  GL      L ++AIKGDWKTA SIF     A+ +KI   
Sbjct: 127 PNPPAENQSSILYNTRKKK--GLLPVHVVLYQSAIKGDWKTAKSIFDVDSSAITMKITDG 186

Query: 79  KTTALHIASVCHQFSFVEKLVK-LTSGSDLANKV-EGFTALSFVAASGVVRIAKLMVDKN 138
           + T LHIA+     SFVE LVK  +S SDLA K   G TAL+F AASGVVRIAK+MVD N
Sbjct: 187 EDTPLHIAAAAKHISFVENLVKEYSSPSDLAIKNGNGDTALAFAAASGVVRIAKVMVDNN 246

Query: 139 RELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALETGGQIQLLICTLLADYY 194
            ELPN+ N +K FP+LMAV +KRK+M SFL  K  F+ L    QI+LLI  + +DYY
Sbjct: 247 AELPNLYNANKPFPVLMAVAYKRKEMASFLLSKTDFQKLNNFEQIELLIAAISSDYY 301

[Close]

BLAST of Csa1G059210.1 vs. TrEMBL
Match: A0A0A0LWY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059180 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-32
Identity = 83/147 (56.46%), Postives = 102/147 (69.39%), Query Frame = 1


Query: 48  LRKAAIKGDWKTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDL 107
           L +AAIKGDWKTA SIF     A+ +KI     T LHIA+     SFVEKLV+  S SDL
Sbjct: 155 LYQAAIKGDWKTAKSIFDVDSSAITMKITGGVDTPLHIAAAAKHISFVEKLVEKYSLSDL 214

Query: 108 ANKVE-GFTALSFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFL 167
           A K + G TAL+F AASGVVRIA++MVDKN +LPNI N +  FP+LMAV +KRK+M SFL
Sbjct: 215 AIKNKNGDTALAFAAASGVVRIAEVMVDKNEKLPNICNANTKFPVLMAVAYKRKEMASFL 274

Query: 168 FRKIKFEALETGGQIQLLICTLLADYY 194
             K  F+ +E   QI+LLI  + +DYY
Sbjct: 275 LSKTNFQKIEAFEQIELLISAISSDYY 301

[Close]

BLAST of Csa1G059210.1 vs. TrEMBL
Match: A0A0A0LU57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059730 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-25
Identity = 73/157 (46.50%), Postives = 104/157 (66.24%), Query Frame = 1


Query: 43  QEADRLRKAAIKGDWKTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKL- 102
           + A +L +AA+KGDW+ AN+IF K    +  KI   + TALHIA+     SFVEKLVKL 
Sbjct: 48  KNAVKLHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLY 107

Query: 103 -TSGSDLANK-VEGFTALSFVAASGVVRIAKLMVDKNRELPNIINDD--KTFPLLMAVVF 162
            ++G DLA K  +G TAL++ A SG+VRIA+ +VD + +L + ++D   K  PLL +V +
Sbjct: 108 SSNGFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFY 167

Query: 163 KRKDMVSFLFRKIKFEALETGGQIQLLICTLLADYYG 195
           K KDM S+LF +  F  L+T  Q+ LL+ T+ +DYYG
Sbjct: 168 KLKDMASYLFSQTNFNDLQTNQQLDLLLATVDSDYYG 204

[Close]

BLAST of Csa1G059210.1 vs. TrEMBL
Match: A0A0A0LRZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060260 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24
Identity = 75/162 (46.30%), Postives = 98/162 (60.49%), Query Frame = 1


Query: 44  EADRLRKAAIKGDWKTANSIFSKYPLA-VNLKIGPSKTTALHIASVCHQFSFVEKLVKLT 103
           +A  L +AA KGDWK A SIF  +P + ++ +I     TALHIA+     SFVEKL+KL 
Sbjct: 21  KAVNLYQAAFKGDWKAAQSIFDDHPPSWISKEITSKGNTALHIAAAAKHISFVEKLIKLY 80

Query: 104 SGS--DLAN-KVEGFTALSFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKR 163
           S    DLA     G TALS+ A SGVV IA+ MV +N  LP+I +     P+L AV++KR
Sbjct: 81  SHHQLDLARPNGAGCTALSYAAVSGVVSIAEAMVLQNNILPDIPDHKGRIPVLKAVIYKR 140

Query: 164 KDMVSFLFRKIKFEALETGGQIQLLICTLLADYY--GSDFLN 200
           KDM  +L+ +  FE LE   Q  LL+ T+ +DYY    D LN
Sbjct: 141 KDMAFYLYHQTNFEGLENNQQFDLLLATIDSDYYDIALDILN 182

[Close]

BLAST of Csa1G059210.1 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein)

HSP 1 Score: 105.9 bits (263), Expect = 3.1e-23
Identity = 60/157 (38.22%), Postives = 83/157 (52.87%), Query Frame = 1


Query: 38  EDGLSQEADRLRKAAIKGDWKTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEK 97
           +D L  +  +L +AA+KGDWK AN I  +    +  KI     T LHIA       FV  
Sbjct: 81  DDKLRAKGVQLYQAALKGDWKAANGIIIEQKYIIYQKITSKSETVLHIAVAAKHEGFVRN 140

Query: 98  LVKLTSGSDLA-NKVEGFTALSFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVV 157
           L+     +DLA   V+G TAL F AASGVV IAK++++KN++LP I    KT P+ MA +
Sbjct: 141 LLGSLESNDLALRNVDGNTALCFAAASGVVEIAKMLIEKNKDLPMIRGGGKTTPIHMAAL 200

Query: 158 FKRKDMVSFLFRKIKFEALETGGQIQLLICTLLADYY 194
           F   +MV +L++  +F        + L    + AD Y
Sbjct: 201 FGHGEMVKYLYKNTRFREFNDEEFVNLFHAVISADIY 237

[Close]

BLAST of Csa1G059210.1 vs. TAIR10
Match: AT3G54070.1 (AT3G54070.1 Ankyrin repeat family protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-16
Identity = 51/161 (31.68%), Postives = 81/161 (50.31%), Query Frame = 1


Query: 35  TEEEDGLSQEADRLRKAAIKGDWKTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSF 94
           T E+       + + KA + GDWKTA+++ S+    V  +I  +   ALHIA       F
Sbjct: 41  TSEDVTKPHSRNLMYKAVLTGDWKTASTLISRKECNVVEQITGNSEIALHIAVAAKHKDF 100

Query: 95  VEKLVKLTSGSDLANK-VEGFTALSFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLM 154
           V  L++     DL+ K  +G T LSF AA G +  A+++++  R+LP+I N+    P+ +
Sbjct: 101 VRNLLREMDPPDLSLKNKDGNTPLSFAAALGDIETAEMLINMIRDLPDISNEKTMTPIHI 160

Query: 155 AVVFKRKDMVSFLFRKIKFEALETGGQIQLLICTLLADYYG 195
           A ++   +MV +LF K   + L     + L    + AD YG
Sbjct: 161 AALYGHGEMVQYLFSKTSIKDLNDQQYLNLFHTMISADIYG 201

[Close]

BLAST of Csa1G059210.1 vs. TAIR10
Match: AT3G18670.1 (AT3G18670.1 Ankyrin repeat family protein)

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-07
Identity = 33/137 (24.09%), Postives = 67/137 (48.91%), Query Frame = 1


Query: 37  EEDGLSQEADR---LRKAAIKGDWKTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFS 96
           ++D + QE      L K    G+ +       + P A+   +  +  T +H A +     
Sbjct: 39  QKDEIRQENSTYLVLFKNIDSGELEATKDFLDRNPEALTAILTSNGDTPIHKAVLSGHIK 98

Query: 97  FVEKLVKLTSGSDLANKVE---GFTALSFVAASGVVRIAKLMVDKNRELPNIINDDKTFP 156
            VE++++     +   K++   G+TAL++ A  G+VRIA+ +V+K   L ++ N  +  P
Sbjct: 99  IVEEIIRRIHDPEQVLKIKNDNGYTALTYAATGGIVRIAECLVNKCPGLVSVRNAKEHIP 158

Query: 157 LLMAVVFKRKDMVSFLF 168
           +++A ++  K +V +L+
Sbjct: 159 IVVASLYGHKHLVQYLY 175

[Close]

BLAST of Csa1G059210.1 vs. NCBI nr
Match: gi|700209395|gb|KGN64491.1| (hypothetical protein Csa_1G059210 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 1.8e-113
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1


Query: 1   MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYNTKTEEEDGLSQEADRLRKAAIKGDWKTA 60
           MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYNTKTEEEDGLSQEADRLRKAAIKGDWKTA
Sbjct: 1   MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYNTKTEEEDGLSQEADRLRKAAIKGDWKTA 60

Query: 61  NSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTALSFV 120
           NSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTALSFV
Sbjct: 61  NSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTALSFV 120

Query: 121 AASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALETGGQ 180
           AASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALETGGQ
Sbjct: 121 AASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALETGGQ 180

Query: 181 IQLLICTLLADYYGSDFLNPLILYSIYIINNLS 214
           IQLLICTLLADYYGSDFLNPLILYSIYIINNLS
Sbjct: 181 IQLLICTLLADYYGSDFLNPLILYSIYIINNLS 213

[Close]

BLAST of Csa1G059210.1 vs. NCBI nr
Match: gi|449454893|ref|XP_004145188.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 1.5e-99
Identity = 192/196 (97.96%), Postives = 192/196 (97.96%), Query Frame = 1


Query: 1   MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYN---TKTEEEDGLSQEADRLRKAAIKGDW 60
           MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYN    KTEEEDGLSQEADRLRKAAIKGDW
Sbjct: 1   MGSSIKKDIPIIEQGLTIPEVCVEDAAPRQYNICVAKTEEEDGLSQEADRLRKAAIKGDW 60

Query: 61  KTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTAL 120
           KTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTAL
Sbjct: 61  KTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDLANKVEGFTAL 120

Query: 121 SFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALET 180
           SFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALET
Sbjct: 121 SFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALET 180

Query: 181 GGQIQLLICTLLADYY 194
           GGQIQLLICTLLADYY
Sbjct: 181 GGQIQLLICTLLADYY 196

[Close]

BLAST of Csa1G059210.1 vs. NCBI nr
Match: gi|700209387|gb|KGN64483.1| (hypothetical protein Csa_1G058660 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 9.1e-33
Identity = 90/177 (50.85%), Postives = 113/177 (63.84%), Query Frame = 1


Query: 19  PEVCVEDAAPRQYNTKTEEEDGLSQEADRLRKAAIKGDWKTANSIFSKYPLAVNLKIGPS 78
           P    E+ +   YNT+ ++  GL      L ++AIKGDWKTA SIF     A+ +KI   
Sbjct: 127 PNPPAENQSSILYNTRKKK--GLLPVHVVLYQSAIKGDWKTAKSIFDVDSSAITMKITDG 186

Query: 79  KTTALHIASVCHQFSFVEKLVK-LTSGSDLANKV-EGFTALSFVAASGVVRIAKLMVDKN 138
           + T LHIA+     SFVE LVK  +S SDLA K   G TAL+F AASGVVRIAK+MVD N
Sbjct: 187 EDTPLHIAAAAKHISFVENLVKEYSSPSDLAIKNGNGDTALAFAAASGVVRIAKVMVDNN 246

Query: 139 RELPNIINDDKTFPLLMAVVFKRKDMVSFLFRKIKFEALETGGQIQLLICTLLADYY 194
            ELPN+ N +K FP+LMAV +KRK+M SFL  K  F+ L    QI+LLI  + +DYY
Sbjct: 247 AELPNLYNANKPFPVLMAVAYKRKEMASFLLSKTDFQKLNNFEQIELLIAAISSDYY 301

[Close]

BLAST of Csa1G059210.1 vs. NCBI nr
Match: gi|778658335|ref|XP_011652537.1| (PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 2.0e-32
Identity = 83/147 (56.46%), Postives = 102/147 (69.39%), Query Frame = 1


Query: 48  LRKAAIKGDWKTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDL 107
           L +AAIKGDWKTA SIF     A+ +KI     T LHIA+     SFVEKLV+  S SDL
Sbjct: 155 LYQAAIKGDWKTAKSIFDVDSSAITMKITGGVDTPLHIAAAAKHISFVEKLVEKYSLSDL 214

Query: 108 ANKVE-GFTALSFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFL 167
           A K + G TAL+F AASGVVRIA++MVDKN +LPNI N +  FP+LMAV +KRK+M SFL
Sbjct: 215 AIKNKNGDTALAFAAASGVVRIAEVMVDKNEKLPNICNANTKFPVLMAVAYKRKEMASFL 274

Query: 168 FRKIKFEALETGGQIQLLICTLLADYY 194
             K  F+ +E   QI+LLI  + +DYY
Sbjct: 275 LSKTNFQKIEAFEQIELLISAISSDYY 301

[Close]

BLAST of Csa1G059210.1 vs. NCBI nr
Match: gi|659067679|ref|XP_008440732.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 2.0e-32
Identity = 81/147 (55.10%), Postives = 100/147 (68.03%), Query Frame = 1


Query: 48  LRKAAIKGDWKTANSIFSKYPLAVNLKIGPSKTTALHIASVCHQFSFVEKLVKLTSGSDL 107
           L +AAIKGDWKTA SIF     A+ +KI   + T LHIA+     SFVE LV   S  +L
Sbjct: 152 LYQAAIKGDWKTAKSIFDVDSSAITMKITDGEDTPLHIAAAARHISFVENLVGKYSSDNL 211

Query: 108 ANK-VEGFTALSFVAASGVVRIAKLMVDKNRELPNIINDDKTFPLLMAVVFKRKDMVSFL 167
           A K   G TAL+F AASGVVRIAK+MVDKN +LPN+ N+ K FP+LMAV +KRK+M SFL
Sbjct: 212 AIKNSNGDTALAFAAASGVVRIAKVMVDKNEKLPNLYNNSKQFPVLMAVAYKRKEMASFL 271

Query: 168 FRKIKFEALETGGQIQLLICTLLADYY 194
             K  F+ L+   QI+LLI  + +DYY
Sbjct: 272 LSKTDFQTLDEFEQIELLISAISSDYY 298

The following BLAST results are available for this feature:

BLAST of Csa1G059210.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWZ9_CUCSA	1.2e-113	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059210 PE=4 SV=1	[more]
A0A0A0LRU9_CUCSA	6.3e-33	50.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058660 PE=4 SV=1	[more]
A0A0A0LWY1_CUCSA	1.4e-32	56.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059180 PE=4 SV=1	[more]
A0A0A0LU57_CUCSA	1.3e-25	46.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059730 PE=4 SV=1	[more]
A0A0A0LRZ3_CUCSA	2.4e-24	46.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060260 PE=4 SV=1	[more]

BLAST of Csa1G059210.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35830.1	3.1e-23	38.22	Ankyrin repeat family protein	[more]
AT3G54070.1	2.8e-16	31.68	Ankyrin repeat family protein	[more]
AT3G18670.1	3.1e-07	24.09	Ankyrin repeat family protein	[more]

BLAST of Csa1G059210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209395\|gb\|KGN64491.1\|	1.8e-113	100.00	hypothetical protein Csa_1G059210 [Cucumis sativus]	[more]
gi\|449454893\|ref\|XP_004145188.1\|	1.5e-99	97.96	PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis sativus]	[more]
gi\|700209387\|gb\|KGN64483.1\|	9.1e-33	50.85	hypothetical protein Csa_1G058660 [Cucumis sativus]	[more]
gi\|778658335\|ref\|XP_011652537.1\|	2.0e-32	56.46	PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein At5g02620-like...	[more]
gi\|659067679\|ref\|XP_008440732.1\|	2.0e-32	55.10	PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR020683	Ankyrin_rpt-contain_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G059210	Csa1G059210	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G059210.1	Csa1G059210.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G059210.1.cds2	Csa1G059210.1.cds2	CDS
Csa1G059210.1.cds1	Csa1G059210.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G059210.1.utr5p1	Csa1G059210.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 48..177 score: 6.0
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 83..169 score: 3.
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 78..169 score: 11
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 48..167 score: 1.07
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 43..193 score: 3.0
None	No IPR available	PANTHER	PTHR24177:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 43..193 score: 3.0