Csa1G043100.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G043100.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	RING finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
Location	Chr1 : 4726836 .. 4728306 (+)
Sequence length	1137

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCGTCCGGTGGCAACTCTGGCGACGGAGCTGGCGGTGGCGTCGCCTCCCATCCCCCTCAGCTCTACTTCTGCTATACCTGCAATCGTACGGTAACAATTACTCCCTCGTCATCCTCCGATCTTTTATGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGAAAGTCCAAACCCTAACCCTAGCCCTGTTTCCAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCACCTTTCAGCACCGGTGGCGGTGGAAATGGCGGTTTCCCTATCATATTCTCTACGACATCTTCATCTGGTGGCATTGGCGGTGGGGGTTCTATGATGAATGATCTATCAGCGCTATTGGGAGGTGGTTCTCTTCGATCGTCGTCGTCGTTACAAAACCCTGACGGTTTTAATCCCTTGCTTTTTCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAAAACGCTTCGGGAGAGGCGTTTCATCCCCCTTCCAATTTCAATCTTGGTGACTACTTCTTTGGCCCCGGCCTTGAGCAGTTGATTCAACAGCTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGGCCATTGAAGGACTTCCAGATATCAAGATTACGGAGGAATTGTTGGCTACGGATTCTTCACAGTGCGCTGTGTGTAAGGATACGTTTGAGCTTGACGAGGTGGCAAAACTGATGCCTTGCAAACACATATATCATGCAGATTGTATAATTCCTTGGTTGGAATTGCATAATTCTTGTCCAGTATGTCGATATGAATTGCCCACAGATGATCCCGATTACGAGCAAAGAACTCGTGGGTCTTCAGCTCCTAATCGGAGTCAAAGCGAAAGTCAACCCTTTGGGGATTCTTCCACTGGTGGGGAAAATGTTGTCGGAAGCGATCCTAATTCTGACGAGAACTCGCAGACTCAACAAATGGGAGAGCGGAGGGTTAGGAGGATAGCTTTTCCTTGGCCCTTCAGAGGATTTGGTTCAGCTGCTGAGACTAGTAATAGTGGAGGTGGCAACAACAGTGGAAATAACGACGAACCTAGCTCCAGAAATAGGGGAAGCCAGGGTTCTTCCGAGCCAATGCAGGAAGATCTCGATTGATGATTACTGGTATTACATCTAAAATTATTTCCTTCCCTTCTGAAATGTTATCATATCTAGTCTGTACAAACGTTTAAGCTTTACAAAAGTAATATAACCAATTAATTTATGTTCTATGGATGGAATGGAAAATATACCAAACAAATATAGTTATTCACATCTTTGGTGAGATAGAGGGCTTGGGGTTTAGACTTGAAATCCCCAGCTATTCCTCTACACAAGCTTCATTCTTTTCTGTATTTAATTGTCTATATATGAAGGTAAGTAATTCTACTTAATGCAATTTCATCTGAACTATACTCGCATCAAAACCAGTATTGATTTTAGAACTACC

mRNA sequence

ATGTCTTCGTCCGGTGGCAACTCTGGCGACGGAGCTGGCGGTGGCGTCGCCTCCCATCCCCCTCAGCTCTACTTCTGCTATACCTGCAATCGTACGGTAACAATTACTCCCTCGTCATCCTCCGATCTTTTATGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGAAAGTCCAAACCCTAACCCTAGCCCTGTTTCCAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCACCTTTCAGCACCGGTGGCGGTGGAAATGGCGGTTTCCCTATCATATTCTCTACGACATCTTCATCTGGTGGCATTGGCGGTGGGGGTTCTATGATGAATGATCTATCAGCGCTATTGGGAGGTGGTTCTCTTCGATCGTCGTCGTCGTTACAAAACCCTGACGGTTTTAATCCCTTGCTTTTTCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAAAACGCTTCGGGAGAGGCGTTTCATCCCCCTTCCAATTTCAATCTTGGTGACTACTTCTTTGGCCCCGGCCTTGAGCAGTTGATTCAACAGCTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGGCCATTGAAGGACTTCCAGATATCAAGATTACGGAGGAATTGTTGGCTACGGATTCTTCACAGTGCGCTGTGTGTAAGGATACGTTTGAGCTTGACGAGGTGGCAAAACTGATGCCTTGCAAACACATATATCATGCAGATTGTATAATTCCTTGGTTGGAATTGCATAATTCTTGTCCAGTATGTCGATATGAATTGCCCACAGATGATCCCGATTACGAGCAAAGAACTCGTGGGTCTTCAGCTCCTAATCGGAGTCAAAGCGAAAGTCAACCCTTTGGGGATTCTTCCACTGGTGGGGAAAATGTTGTCGGAAGCGATCCTAATTCTGACGAGAACTCGCAGACTCAACAAATGGGAGAGCGGAGGGTTAGGAGGATAGCTTTTCCTTGGCCCTTCAGAGGATTTGGTTCAGCTGCTGAGACTAGTAATAGTGGAGGTGGCAACAACAGTGGAAATAACGACGAACCTAGCTCCAGAAATAGGGGAAGCCAGGGTTCTTCCGAGCCAATGCAGGAAGATCTCGATTGA

Coding sequence (CDS)

ATGTCTTCGTCCGGTGGCAACTCTGGCGACGGAGCTGGCGGTGGCGTCGCCTCCCATCCCCCTCAGCTCTACTTCTGCTATACCTGCAATCGTACGGTAACAATTACTCCCTCGTCATCCTCCGATCTTTTATGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGAAAGTCCAAACCCTAACCCTAGCCCTGTTTCCAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCACCTTTCAGCACCGGTGGCGGTGGAAATGGCGGTTTCCCTATCATATTCTCTACGACATCTTCATCTGGTGGCATTGGCGGTGGGGGTTCTATGATGAATGATCTATCAGCGCTATTGGGAGGTGGTTCTCTTCGATCGTCGTCGTCGTTACAAAACCCTGACGGTTTTAATCCCTTGCTTTTTCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAAAACGCTTCGGGAGAGGCGTTTCATCCCCCTTCCAATTTCAATCTTGGTGACTACTTCTTTGGCCCCGGCCTTGAGCAGTTGATTCAACAGCTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGGCCATTGAAGGACTTCCAGATATCAAGATTACGGAGGAATTGTTGGCTACGGATTCTTCACAGTGCGCTGTGTGTAAGGATACGTTTGAGCTTGACGAGGTGGCAAAACTGATGCCTTGCAAACACATATATCATGCAGATTGTATAATTCCTTGGTTGGAATTGCATAATTCTTGTCCAGTATGTCGATATGAATTGCCCACAGATGATCCCGATTACGAGCAAAGAACTCGTGGGTCTTCAGCTCCTAATCGGAGTCAAAGCGAAAGTCAACCCTTTGGGGATTCTTCCACTGGTGGGGAAAATGTTGTCGGAAGCGATCCTAATTCTGACGAGAACTCGCAGACTCAACAAATGGGAGAGCGGAGGGTTAGGAGGATAGCTTTTCCTTGGCCCTTCAGAGGATTTGGTTCAGCTGCTGAGACTAGTAATAGTGGAGGTGGCAACAACAGTGGAAATAACGACGAACCTAGCTCCAGAAATAGGGGAAGCCAGGGTTCTTCCGAGCCAATGCAGGAAGATCTCGATTGA

Protein sequence

MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPSSRNRGSQGSSEPMQEDLD*

Homology

[Close]

BLAST of Csa1G043100.1 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.2e-75
Identity = 165/361 (45.71%), Postives = 211/361 (58.45%), Query Frame = 1


Query: 7   NSGDGAGGGVASHPP--QLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNPS 66
           +SG  + G  A+ P   +++FCY CN+TVTI+ SSS+D  CP CN  F+EE E PNPN S
Sbjct: 2   SSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQS 61

Query: 67  PVSNPFLSFTSEAFP---PFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGG 126
              NP  + +   FP   PFST        P+IF +++++       S M+ +S      
Sbjct: 62  LNFNP--NSSDSFFPMADPFSTL------LPLIFGSSAAAP------SGMDFMSLFGPSM 121

Query: 127 SLRSSSSLQNP--DGFNPLLFLQNYLQS-----ANVQLVIQN-ASGEAFHPPSNFNLGDY 186
             ++ S+ QNP  D F+P  FLQN+LQ+      + + VI+N  S      P NF  GDY
Sbjct: 122 QPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNF--GDY 181

Query: 187 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFEL 246
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAI+ LP +K+T+++L ++ +QCAVC D FE 
Sbjct: 182 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFED 241

Query: 247 DEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQ 306
               K MPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDYE R++GS           
Sbjct: 242 GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGS-------- 301

Query: 307 PFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFR---GFGSAAETSNSGGG 352
                        G    S E  QT +        I  PWPFR   G GS +    +GGG
Sbjct: 302 -------------GDGQGSVEGQQTPRFS------IQLPWPFRRQDGSGSGSGAPGTGGG 319

[Close]

BLAST of Csa1G043100.1 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-73
Identity = 160/351 (45.58%), Postives = 203/351 (57.83%), Query Frame = 1


Query: 3   SSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSS-SSDLLCPNCNDSFVEEMESPNP 62
           SS GN   G G        + +FCY CNRTV +T S  SSD  CP CN+ F+EE ++PNP
Sbjct: 2   SSDGNVTGGGGANTVGVTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNP 61

Query: 63  N-------PSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDL 122
           N       P+P S PF         PF++        P++F ++SS+          N+ 
Sbjct: 62  NQGSGFLNPNPNSIPFHDLFLTLSDPFASL------LPLLFPSSSSTTTSSSASIDPNNP 121

Query: 123 SALLGGGSLRSSSSLQNPDGFNPLLFLQNYLQS-----ANVQLVIQN-ASGEAFHPPSNF 182
           S     G  RS     +P  F+P  F+QN+L       A ++ VIQN  S + F  P+N 
Sbjct: 122 SL---SGPTRSGRG--DPFAFDPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPAN- 181

Query: 183 NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCK 242
            +GDYF GPGLEQLIQQLAENDPNRYGTPPASKSAIE LP + IT+  L ++ +QCAVC 
Sbjct: 182 -IGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCM 241

Query: 243 DTFELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRS 302
           D FE    AK MPCKH+YH DC++PWLELHNSCPVCR+ELPTDDPDYE+R RG+      
Sbjct: 242 DDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGA------ 301

Query: 303 QSESQPFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFG 340
                     ++GG +   S   SD +++T +    R  RI+ PWPF+  G
Sbjct: 302 --------QGTSGGNDGDNSGQRSDGDNRTVE----RSFRISLPWPFQARG 321

[Close]

BLAST of Csa1G043100.1 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.9e-40
Identity = 116/342 (33.92%), Postives = 155/342 (45.32%), Query Frame = 1


Query: 24  YFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNPSPVSNPFLSFTSEAFPPFST 83
           ++C+ C R V +      + +C  C   FVEE++    +P              F  F +
Sbjct: 8   HWCHRCQRAVRL---HGQEPVCFYCGGGFVEELDMAQASP--------------FDMFRS 67

Query: 84  GGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSSLQNPDGFNPLLFLQN 143
             G      ++    +          M N L+       +R  +    P+ F  L  L  
Sbjct: 68  HRG------VVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLI 127

Query: 144 YLQSANVQLVIQNASGEAFHPPS------NFNLGDYFFGPGLEQLIQQLAENDPNRYGTP 203
           +      +L   NA    F+  S        N GDYFFGPGLE+L +QL+     R G P
Sbjct: 128 FGGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPP 187

Query: 204 PASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLMPCKHIYHADCIIPWLEL 263
           PA +SAI+ LP IKI +  L +  S C VCKD FEL   AK MPC HIYH+DCI+PWL  
Sbjct: 188 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 247

Query: 264 HNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVGSDPNSDENSQ 323
           HNSCPVCR ELP+           +S P+ SQ+ + P         N   S  +S  NS 
Sbjct: 248 HNSCPVCRQELPS-----------ASGPSSSQNRTTP-------TRNYRSSSSSSSSNS- 305

Query: 324 TQQMGERRVRRIAFPWPFRGFG-SAAETSNSGGGNNSGNNDE 359
            ++ G  R    +  WPFR  G S++ T N GG  NS  +DE
Sbjct: 308 -RENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRNSDTSDE 305

[Close]

BLAST of Csa1G043100.1 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-30
Identity = 81/258 (31.40%), Postives = 125/258 (48.45%), Query Frame = 1


Query: 24  YFCYTCNRTVTI--TPSSSSDLLCPNCNDSFVEEMESPNPNPS---PVSNPFLSFTSEAF 83
           Y+CY+C R +++     +++ +LCP CN  F+EE+E  + +     P S P +    E  
Sbjct: 31  YWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVRSVEETH 90

Query: 84  PPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSSLQNPDGFNPL 143
                    N                    +  N +  L GGG   +   ++N +G    
Sbjct: 91  RSIIRRRRSNRR------------------TSFNPVIVLHGGGGGGAGERVENEEGDGAT 150

Query: 144 LFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQLIQQLAE-----NDPNR 203
              + Y      +    + SG    P  + ++ +   G G E+L++QL++     N   R
Sbjct: 151 RERRAY------EFYYDDGSGSGLRPLPD-SVSEILMGSGFERLLEQLSQIEASGNGIGR 210

Query: 204 YGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLMPCKHIYHADCIIP 263
            G PPASKSAIE LP ++I++     +++ CAVC + FE     + MPCKHI+H DCI+P
Sbjct: 211 SGNPPASKSAIESLPRVEISDCHTKAEAN-CAVCTEVFEAGIEGREMPCKHIFHGDCIVP 262

Query: 264 WLELHNSCPVCRYELPTD 272
           WL + NSCPVCR+ELP+D
Sbjct: 271 WLSIRNSCPVCRFELPSD 262

[Close]

BLAST of Csa1G043100.1 vs. Swiss-Prot
Match: RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.7e-30
Identity = 93/268 (34.70%), Postives = 130/268 (48.51%), Query Frame = 1


Query: 24  YFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESP---NPNPSPVSNPFLSFTSEA-FP 83
           Y+CY+C+R V ++ S S    CP+C+  F+E ++ P    P+ S  +       S   FP
Sbjct: 6   YWCYSCSRFVWVSDSIS----CPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRFP 65

Query: 84  PFSTGGG--------GNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSSLQN 143
           P S+            N   P I + T S+          N +  L G  +  SS  +  
Sbjct: 66  PPSSSSSTPSASMHADNSPTPTIVTRTRSNRS-------PNPVIVLRGSAAAPSSDVVS- 125

Query: 144 PDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQLIQQLAENDP 203
            +G +   F   Y    +        SG    PPS   + ++  G G ++L+ Q+++ + 
Sbjct: 126 -EGLDRSAFQMYYDDGTD--------SGLRPLPPS---MTEFLLGSGFDRLLDQISQIEL 185

Query: 204 NRYGT------PPASKSAIEGLPDIKITEELLATDS-SQCAVCKDTFELDEVAKLMPCKH 263
           N          PPASKSAIE LP I+I    L +DS S CAVCK+ F L   A+ MPC H
Sbjct: 186 NTNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNH 245

Query: 264 IYHADCIIPWLELHNSCPVCRYELPTDD 273
           IYH DCI+PWL + NSCPVCR+ELP +D
Sbjct: 246 IYHPDCILPWLAIRNSCPVCRHELPAED 249

[Close]

BLAST of Csa1G043100.1 vs. TrEMBL
Match: A0A0A0LTV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 3.1e-224
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 1


Query: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG
Sbjct: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180
           GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE
Sbjct: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180

Query: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240
           QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM
Sbjct: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240

Query: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST 300
           PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST
Sbjct: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST 300

Query: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360
           GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS
Sbjct: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360

Query: 361 SRNRGSQGSSEPMQEDLD 379
           SRNRGSQGSSEPMQEDLD
Sbjct: 361 SRNRGSQGSSEPMQEDLD 378

[Close]

BLAST of Csa1G043100.1 vs. TrEMBL
Match: W9T1E8_9ROSA (E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 1.6e-124
Identity = 241/391 (61.64%), Postives = 281/391 (71.87%), Query Frame = 1


Query: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSG   GGG+    PQ YFC+ CNRTV+ITPS +SDL+CP C   F+EE+++PN
Sbjct: 1   MSSSGGNSG---GGGIGISAPQPYFCHQCNRTVSITPSPTSDLVCPVCGGGFLEEVQNPN 60

Query: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           P+P P  N F SF+S+          G  GFP++F+TTSSSG   GGG++++DL AL GG
Sbjct: 61  PSPEPSPNSFFSFSSD------DSSFGARGFPLLFTTTSSSGH--GGGALVDDLPALFGG 120

Query: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQS-----ANVQLVIQNASGE--AFHPPSNFNLGDY 180
              R S S ++ D FNP  FLQNYLQ+     ANVQ VI    G+   F  P+N NLGDY
Sbjct: 121 PLTRVSQS-EDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSA+EGLP +KITEELLA+DSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDTFEL 240

Query: 241 DEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQ 300
            E AK MPCKHIYH++CI+PWLELHNSCPVCRYELPTDDPDYEQR RG+S P      + 
Sbjct: 241 GEEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQAAG 300

Query: 301 PFGDSSTGGE-NVV----GSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSG 360
            F  S  GG  N V    GS   S EN QT +M ERR   I+ P  FR FGS AETSN+G
Sbjct: 301 GFNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETSNTG 360

Query: 361 GGNNSGNNDEPSSRNRGSQGS-SEPMQEDLD 379
            GNN+GNN+  +S NRG+Q + SEP  EDLD
Sbjct: 361 SGNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]

BLAST of Csa1G043100.1 vs. TrEMBL
Match: A0A059AWT5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00641 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 3.4e-106
Identity = 220/403 (54.59%), Postives = 266/403 (66.00%), Query Frame = 1


Query: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           M+SSGG +G GAG G     PQLY+C+ C  TV+I  S ++DL+CP+CN  F+EE ESP+
Sbjct: 1   MASSGGRTGAGAGFGGG---PQLYYCHQCRSTVSINRSPTADLVCPDCNGEFLEESESPD 60

Query: 61  PNPS-PVSNPFLSFTSEAFPPFSTGGGGN------GGFPIIFSTTSSSGGIGGGGSM-MN 120
            +P  P   PF +F S       +G GG        G P +F+++S++GG  GGG+  M+
Sbjct: 61  VSPMLPPFFPFENFGSGGSAGSGSGSGGGMSFSSGAGLPWVFTSSSTAGGAAGGGAGGMD 120

Query: 121 DLSALLGGGSL--RSSSSLQNPDGFNPLLFLQNYLQS-----ANVQLVIQNA----SGEA 180
           D SAL GG S       +  NPD FNPLLFL NY Q+     AN+Q VI N     SG +
Sbjct: 121 DFSALFGGASAFGEGGGNSNNPDAFNPLLFLNNYFQTLRAGGANIQFVIDNNTGGDSGGS 180

Query: 181 FHPPSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDS 240
           F  P N NLGDYF G  LEQLIQQLAENDPNRYGTPPASK+AI GLP +KI EE LA+D+
Sbjct: 181 FRFPGNINLGDYFIGSNLEQLIQQLAENDPNRYGTPPASKTAINGLPVVKIDEESLASDN 240

Query: 241 SQCAVCKDTFELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRG 300
           SQCAVCKDTFEL E AK MPCKHIYH+DCI+PWLELHNSCPVCR+ELPTDDPDYEQR RG
Sbjct: 241 SQCAVCKDTFELGEEAKQMPCKHIYHSDCILPWLELHNSCPVCRHELPTDDPDYEQRNRG 300

Query: 301 SSAPNRSQSESQPFGDSSTGGENVVGSDPNSDENSQTQQMGERRVR-RIAFPWPF-RGFG 360
                  Q++    G + T   + +   P S ++SQT Q  ERR R  +  PWPF R FG
Sbjct: 301 ------PQAQQVLGGRTQTDVSSDLSGAPASGDSSQTPQTMERRFRISLPLPWPFNRTFG 360

Query: 361 SAAETSN--SGGGNNSGNNDEPSSRNRGSQGS--SEPMQEDLD 379
           S AETS+  SG GNN+GNND  S+   G+  +  SE  QEDLD
Sbjct: 361 SPAETSDSGSGSGNNNGNNDGNSNTGGGANRNFESETRQEDLD 394

[Close]

BLAST of Csa1G043100.1 vs. TrEMBL
Match: A0A068TRB9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022708001 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.1e-104
Identity = 221/401 (55.11%), Postives = 253/401 (63.09%), Query Frame = 1


Query: 5   GGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSS--SDLLCPNCNDSFVEEMESPNPN 64
           GG    GAGGG A   PQ YFCY C RTVTI+PS S  S+L+CPNC+  F+EE ES +  
Sbjct: 8   GGGDRGGAGGGTA---PQNYFCYQCQRTVTISPSPSPTSELVCPNCHGGFLEESESADEP 67

Query: 65  PSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGS 124
           PSP +     F    F     GGGG GGFP+IFS++S     GGGG +  DLSAL GG +
Sbjct: 68  PSPPAVGPDLFFPPIFGGGGGGGGGGGGFPVIFSSSS-----GGGGEI--DLSALFGGAA 127

Query: 125 LRSSSSLQNPDGFNPLLFLQNYLQS-----ANVQLVIQNASGEAFHP-------PSNFNL 184
                  Q+P+ FNP  FL NYL +     AN+Q+V  N  G            P NF  
Sbjct: 128 ---GYPAQSPNEFNPFAFLNNYLNNLRAGGANIQVVFDNPGGGVGIGFGGGGGLPGNF-- 187

Query: 185 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDT 244
           GDYF GPGLEQLIQQLAENDPNRYGTPPASKSA+EGLP +K+TEELLATDSSQCAVCKD+
Sbjct: 188 GDYFVGPGLEQLIQQLAENDPNRYGTPPASKSAVEGLPTVKMTEELLATDSSQCAVCKDS 247

Query: 245 FELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQS 304
           F LDE AK MPCKHIYH+DCI+PWLELHNSCPVCRYELPTDDPDYE R  G    N S S
Sbjct: 248 FLLDEEAKQMPCKHIYHSDCILPWLELHNSCPVCRYELPTDDPDYESRRNGQQGGNNSTS 307

Query: 305 ESQPFG-------DSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAE 364
             + FG       +  TG   + G   N  EN QT +  ERR  RI+ PW FRGFGS AE
Sbjct: 308 NVRSFGINIRTDDNLGTGSGGLSGGAVN-QENPQTPRTVERRF-RISLPWLFRGFGSPAE 367

Query: 365 TSNSGGGNNSGNNDEPSSRNRGSQGSS------EPMQEDLD 379
           TS SGG  NS   +  S +N  + G S      +   EDLD
Sbjct: 368 TSGSGGAANSDGGNNGSRQNNNNSGGSNTDSGGQARMEDLD 391

[Close]

BLAST of Csa1G043100.1 vs. TrEMBL
Match: F6HVS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00320 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.9e-104
Identity = 217/380 (57.11%), Postives = 248/380 (65.26%), Query Frame = 1


Query: 4   SGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNP 63
           SGG+ G G GGG A+  PQ YFCY CN TV+ITPS +SD LCP+CND F+EE+E+PNPNP
Sbjct: 7   SGGSGGGGPGGGSAA--PQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNP 66

Query: 64  SPVS--NPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGG 123
            PV   NPFL F+    P  S  G     FP +  +T++ G I    S+  D   L G  
Sbjct: 67  IPVPIPNPFLGFSD--LPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV--DFPGLFGA- 126

Query: 124 SLRSSSSLQNPDGFNPLLFLQNYLQS-----ANVQLVIQNASGEAFHPPSNFNLGDYFFG 183
                    +PD F+P  FLQNYLQ+      NVQ VI   S E     S  NLGDYF G
Sbjct: 127 ---------DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSP-NLGDYFIG 186

Query: 184 PGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEV 243
           PGLEQLIQQLAENDPNRYGTPPASKSAIEGLP I+IT ELL TDSSQCAVCKD+FELDE 
Sbjct: 187 PGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEE 246

Query: 244 AKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTR--------GSSAPNRS 303
           AK MPCKHIYH DCI+PWLELHNSCPVCRYELPTDDPDYE RTR        G++A   +
Sbjct: 247 AKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVNQTGGNAAAVAA 306

Query: 304 QSESQPFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSG 363
              +      + GG  V G +P    N QT +  + R+ RI+FPWPFR FGS AETSNS 
Sbjct: 307 AGAASNSASGAAGGAAVSGENP----NPQTPRTAD-RMFRISFPWPFRTFGSPAETSNSN 364

Query: 364 --GGNNSGN--NDEPSSRNR 365
             GG+N GN  N E  S NR
Sbjct: 367 NDGGSNPGNRANQESGSENR 364

[Close]

BLAST of Csa1G043100.1 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 285.0 bits (728), Expect = 6.6e-77
Identity = 165/361 (45.71%), Postives = 211/361 (58.45%), Query Frame = 1


Query: 7   NSGDGAGGGVASHPP--QLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNPS 66
           +SG  + G  A+ P   +++FCY CN+TVTI+ SSS+D  CP CN  F+EE E PNPN S
Sbjct: 2   SSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQS 61

Query: 67  PVSNPFLSFTSEAFP---PFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGG 126
              NP  + +   FP   PFST        P+IF +++++       S M+ +S      
Sbjct: 62  LNFNP--NSSDSFFPMADPFSTL------LPLIFGSSAAAP------SGMDFMSLFGPSM 121

Query: 127 SLRSSSSLQNP--DGFNPLLFLQNYLQS-----ANVQLVIQN-ASGEAFHPPSNFNLGDY 186
             ++ S+ QNP  D F+P  FLQN+LQ+      + + VI+N  S      P NF  GDY
Sbjct: 122 QPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNF--GDY 181

Query: 187 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFEL 246
           FFGPGLEQLIQQLAENDPNRYGTPPASKSAI+ LP +K+T+++L ++ +QCAVC D FE 
Sbjct: 182 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFED 241

Query: 247 DEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQ 306
               K MPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDYE R++GS           
Sbjct: 242 GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGS-------- 301

Query: 307 PFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFR---GFGSAAETSNSGGG 352
                        G    S E  QT +        I  PWPFR   G GS +    +GGG
Sbjct: 302 -------------GDGQGSVEGQQTPRFS------IQLPWPFRRQDGSGSGSGAPGTGGG 319

[Close]

BLAST of Csa1G043100.1 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 8.7e-45
Identity = 108/263 (41.06%), Postives = 149/263 (56.65%), Query Frame = 1


Query: 108 GSMMNDLSALLGGGSLRSSSSLQNPDGFNP---LLFLQNYLQSANVQLVIQNASGEAFHP 167
           G+++  L  +  G +    SS  N D       ++ +  Y QS    LV+ +   +  + 
Sbjct: 152 GNILQLLQGIRAGIASEYESSDNNWDNSRERDRVIMINPYNQS----LVVPSDQNQ--NH 211

Query: 168 PSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQC 227
           PS  +LGDYF GPGL+ L+Q LAENDPNR GTPPA K A+E LP +KI E L      QC
Sbjct: 212 PSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QC 271

Query: 228 AVCKDTFELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSA 287
           +VC D FE    AK MPCKH +H  CI+PWLELH+SCPVCR+ELP+   D ++    S  
Sbjct: 272 SVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSER 331

Query: 288 PNRSQSESQPFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRG-FGSAAE 347
             R+++  +      T   NVV +  N+D   +  ++     RR +FPWPF G F S++ 
Sbjct: 332 VLRTRNVRE------TSNGNVVENVGNADRGRE-DEVRSGNGRRFSFPWPFSGLFSSSSS 391

Query: 348 TSNSGGGNNSGNNDEPSSRNRGS 367
           +S+S  G+ SG N+   SR+ GS
Sbjct: 392 SSSSTSGSQSGENNF-FSRSSGS 394

[Close]

BLAST of Csa1G043100.1 vs. TAIR10
Match: AT1G55530.1 (AT1G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 2.8e-43
Identity = 95/238 (39.92%), Postives = 132/238 (55.46%), Query Frame = 1


Query: 114 LSALLGGGSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDY 173
           L  +  G S+ S S+     G NP   +   + ++N  + +QN++     P  +  LGDY
Sbjct: 125 LQGIRAGLSVESEST--GNGGNNPGRVI--LINTSNQTITVQNSADMDSVPAGS--LGDY 184

Query: 174 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFEL 233
           F GPG E L+Q+LAENDPNRYGTPPA K A+E L  +KI E L      QC+VC D FE+
Sbjct: 185 FIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCLDDFEI 244

Query: 234 DEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQ 293
              AKLMPC H +H+DC++PWLELH+SCPVCRY+LP D    E +T   +  + +   S 
Sbjct: 245 GTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPAD----EAKTDSVTTTSDNNGSSS 304

Query: 294 PFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRR----IAFPWPFRGFGSAAETSNS 348
               +S G EN  G+    +E  + ++  E          + PWPF    S+++ SN+
Sbjct: 305 ASATTSHGAENSDGNRRQEEEEEEEEEEEEENENNDGSGFSIPWPFSTLFSSSQDSNA 346

[Close]

BLAST of Csa1G043100.1 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-41
Identity = 116/342 (33.92%), Postives = 155/342 (45.32%), Query Frame = 1


Query: 24  YFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNPSPVSNPFLSFTSEAFPPFST 83
           ++C+ C R V +      + +C  C   FVEE++    +P              F  F +
Sbjct: 8   HWCHRCQRAVRL---HGQEPVCFYCGGGFVEELDMAQASP--------------FDMFRS 67

Query: 84  GGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSSLQNPDGFNPLLFLQN 143
             G      ++    +          M N L+       +R  +    P+ F  L  L  
Sbjct: 68  HRG------VVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLI 127

Query: 144 YLQSANVQLVIQNASGEAFHPPS------NFNLGDYFFGPGLEQLIQQLAENDPNRYGTP 203
           +      +L   NA    F+  S        N GDYFFGPGLE+L +QL+     R G P
Sbjct: 128 FGGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPP 187

Query: 204 PASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLMPCKHIYHADCIIPWLEL 263
           PA +SAI+ LP IKI +  L +  S C VCKD FEL   AK MPC HIYH+DCI+PWL  
Sbjct: 188 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 247

Query: 264 HNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVGSDPNSDENSQ 323
           HNSCPVCR ELP+           +S P+ SQ+ + P         N   S  +S  NS 
Sbjct: 248 HNSCPVCRQELPS-----------ASGPSSSQNRTTP-------TRNYRSSSSSSSSNS- 305

Query: 324 TQQMGERRVRRIAFPWPFRGFG-SAAETSNSGGGNNSGNNDE 359
            ++ G  R    +  WPFR  G S++ T N GG  NS  +DE
Sbjct: 308 -RENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRNSDTSDE 305

[Close]

BLAST of Csa1G043100.1 vs. TAIR10
Match: AT3G13430.1 (AT3G13430.1 RING/U-box superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 5.0e-40
Identity = 112/323 (34.67%), Postives = 159/323 (49.23%), Query Frame = 1


Query: 24  YFCYTCNRTVTITPSSSSDLL-CPNCNDSFVEEMESPNPNPS------PV---------- 83
           Y+C+ C+R+V   P    +++ C  C   FVEEM++ + + +      P+          
Sbjct: 9   YWCHMCSRSVI--PLIQDEIIKCNFCQSGFVEEMDNNDDHQAADSLWTPILMEMMNNNHD 68

Query: 84  --------SNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGS--MMNDLSA 143
                   S   L    E       G   N G   I         I    S  ++N L  
Sbjct: 69  QHSTNQEDSESILEDEDEDEDDGDDGDQNNDGEIDITHQLEEIRRIRTRHSTAIVNLLQG 128

Query: 144 LLGGGSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFG 203
           +  G  + S ++  NPD    ++ + ++    N ++ +   S +    PS  +LGDYF G
Sbjct: 129 IRAGLLIESENNEDNPDNSELVVLINSF----NQRIRVHQDSVDTTSVPSG-SLGDYFIG 188

Query: 204 PGLEQLIQQLAEND-PNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDE 263
           PG E L+Q+LAEND  NRYGTPPA+K A+E L  +KI + LL     QC+VC D FE+  
Sbjct: 189 PGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----QCSVCLDDFEIGM 248

Query: 264 VAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPF 319
            AK MPCKH +H+DC++PWLELH+SCPVCRY LPT D D E +T   ++ N   +E    
Sbjct: 249 EAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD-EPKTDAETSRNDDNNE---- 308

[Close]

BLAST of Csa1G043100.1 vs. NCBI nr
Match: gi|449439501|ref|XP_004137524.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 785.4 bits (2027), Expect = 4.4e-224
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 1


Query: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG
Sbjct: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180
           GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE
Sbjct: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180

Query: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240
           QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM
Sbjct: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240

Query: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST 300
           PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST
Sbjct: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST 300

Query: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360
           GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS
Sbjct: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360

Query: 361 SRNRGSQGSSEPMQEDLD 379
           SRNRGSQGSSEPMQEDLD
Sbjct: 361 SRNRGSQGSSEPMQEDLD 378

[Close]

BLAST of Csa1G043100.1 vs. NCBI nr
Match: gi|659066950|ref|XP_008467256.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 767.3 bits (1980), Expect = 1.2e-218
Identity = 371/378 (98.15%), Postives = 372/378 (98.41%), Query Frame = 1


Query: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSGDGAGGG  S+PPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN
Sbjct: 1   MSSSGGNSGDGAGGGAVSYPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           PNPSPV NPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG
Sbjct: 61  PNPSPVPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180
           GSLRS SSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE
Sbjct: 121 GSLRS-SSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180

Query: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240
           QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM
Sbjct: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240

Query: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST 300
           PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTR SSAPNRSQSESQPFGDSST
Sbjct: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRASSAPNRSQSESQPFGDSST 300

Query: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360
           GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS
Sbjct: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360

Query: 361 SRNRGSQGSSEPMQEDLD 379
           SRNRGSQ SSEPMQEDLD
Sbjct: 361 SRNRGSQSSSEPMQEDLD 377

[Close]

BLAST of Csa1G043100.1 vs. NCBI nr
Match: gi|703069031|ref|XP_010088395.1| (E3 ubiquitin-protein ligase RING1 [Morus notabilis])

HSP 1 Score: 454.1 bits (1167), Expect = 2.3e-124
Identity = 241/391 (61.64%), Postives = 281/391 (71.87%), Query Frame = 1


Query: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSG   GGG+    PQ YFC+ CNRTV+ITPS +SDL+CP C   F+EE+++PN
Sbjct: 1   MSSSGGNSG---GGGIGISAPQPYFCHQCNRTVSITPSPTSDLVCPVCGGGFLEEVQNPN 60

Query: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           P+P P  N F SF+S+          G  GFP++F+TTSSSG   GGG++++DL AL GG
Sbjct: 61  PSPEPSPNSFFSFSSD------DSSFGARGFPLLFTTTSSSGH--GGGALVDDLPALFGG 120

Query: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQS-----ANVQLVIQNASGE--AFHPPSNFNLGDY 180
              R S S ++ D FNP  FLQNYLQ+     ANVQ VI    G+   F  P+N NLGDY
Sbjct: 121 PLTRVSQS-EDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNLGDY 180

Query: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFEL 240
           FFGPGLEQLIQQLAENDPNRYGTPPASKSA+EGLP +KITEELLA+DSSQCAVCKDTFEL
Sbjct: 181 FFGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDTFEL 240

Query: 241 DEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQ 300
            E AK MPCKHIYH++CI+PWLELHNSCPVCRYELPTDDPDYEQR RG+S P      + 
Sbjct: 241 GEEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQAAG 300

Query: 301 PFGDSSTGGE-NVV----GSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSG 360
            F  S  GG  N V    GS   S EN QT +M ERR   I+ P  FR FGS AETSN+G
Sbjct: 301 GFNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETSNTG 360

Query: 361 GGNNSGNNDEPSSRNRGSQGS-SEPMQEDLD 379
            GNN+GNN+  +S NRG+Q + SEP  EDLD
Sbjct: 361 SGNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]

BLAST of Csa1G043100.1 vs. NCBI nr
Match: gi|1009133460|ref|XP_015883912.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba])

HSP 1 Score: 422.9 bits (1086), Expect = 5.8e-115
Identity = 232/389 (59.64%), Postives = 269/389 (69.15%), Query Frame = 1


Query: 1   MSSSGGN-SGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESP 60
           MSSSGG+  G G  G   +  PQLYFC+ C+RTVT+TPS ++DLLCP CN  FVEE+ +P
Sbjct: 1   MSSSGGSLGGAGVAGTAGAGSPQLYFCHVCDRTVTLTPSPTTDLLCPVCNGGFVEELGTP 60

Query: 61  NPNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLG 120
            PNP+P  N FL F+ E+ P       G  GFP +FST +SSG   G  ++++DLSAL G
Sbjct: 61  -PNPNP--NTFLPFSHES-PSL-----GAAGFPFLFSTAASSGPTSGPATVVDDLSALFG 120

Query: 121 GGSLRSSS-SLQNPDGFNPLLFLQNYLQS-----ANVQLVIQNA-SGE--AFHPPSNFNL 180
            G  R+   + Q+PD FNP LFLQNYLQ+     ANVQ VI +  SG+   F  PSN NL
Sbjct: 121 AGPTRNQHLTFQDPDAFNPFLFLQNYLQTLRANGANVQFVIDSGGSGDPAGFRVPSNLNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDT 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI+GLP +KI+EELLA+DSSQCAVCKDT
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIQGLPVVKISEELLASDSSQCAVCKDT 240

Query: 241 FELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQS 300
           FEL E AK MPCKHIYH+DCI+PWLELHNSCPVCRYELPTDDPDYEQRTR  S       
Sbjct: 241 FELGEEAKQMPCKHIYHSDCIVPWLELHNSCPVCRYELPTDDPDYEQRTREGSGVGNQSR 300

Query: 301 ESQPFGDSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGG 360
               F  SS G +   G+   S EN  T      R  R++ P  FR FGS AETSNSG G
Sbjct: 301 TGGGFNASSGGNDGGTGTGAASGENPPTP-----RSFRVSLPRLFRVFGSPAETSNSGSG 360

Query: 361 NNSGNNDEPSSRNRGSQGSS-EPMQEDLD 379
           NN G     ++ NRG+  S  EP QEDLD
Sbjct: 361 NNDG---ATNTGNRGNPNSGPEPRQEDLD 372

[Close]

BLAST of Csa1G043100.1 vs. NCBI nr
Match: gi|645270190|ref|XP_008240345.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Prunus mume])

HSP 1 Score: 412.5 bits (1059), Expect = 7.8e-112
Identity = 232/403 (57.57%), Postives = 269/403 (66.75%), Query Frame = 1


Query: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSG   GG +A  PPQLYFC+ C+RTV++ P  +SDL+CP C+  FVEEME+PN
Sbjct: 1   MSSSGGNSGS-VGGPIA--PPQLYFCHQCDRTVSLNPPPTSDLVCPICSGGFVEEMETPN 60

Query: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
            NP P  NPF S  S   PPF++ G     FP++FS         G G+  +DLSAL GG
Sbjct: 61  SNPFP-PNPFFSVPSSDAPPFASSG-----FPLLFSAP-------GPGNFSDDLSALFGG 120

Query: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQS-----ANVQLVIQNASGEA-----FHPPSNFNL 180
              RSS   Q+PD FNP +FLQNYLQ+     ANVQ VI N  G       F  P N NL
Sbjct: 121 APARSSP-FQDPDAFNPFVFLQNYLQTLRANGANVQFVIDNNPGAGGDPAGFRVPHNLNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDT 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSA+EGLP +KI++ELL +DSSQCAVCKD+
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAVEGLPVVKISKELLDSDSSQCAVCKDS 240

Query: 241 FELDEVAKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQS 300
           FEL E AK MPCKHIYH+DCI+PWLELHNSCPVCRYELPTDD DYEQR  G+ A     +
Sbjct: 241 FELGEEAKQMPCKHIYHSDCILPWLELHNSCPVCRYELPTDDTDYEQRLSGAPANANRAN 300

Query: 301 ESQPFGD----SSTGGENVVGSD---------PNSDENSQTQQMGERRVRRIAFPWPFRG 360
           +S   G     +  GG +  GS          P+ D  S T +  ERR   I+ P  FR 
Sbjct: 301 QSAAAGGVNIFAGVGGGSGSGSGSGIGIGIGAPSLDNQSPTPRTVERRF-TISLPRLFRV 360

Query: 361 FGSAAETSNSGGGNNSGNNDEPSSRNRG--SQGSSEPMQEDLD 379
           FG +AETSNSG    SGNNDE +S NRG  + GS EP  EDLD
Sbjct: 361 FGGSAETSNSG----SGNNDESNSGNRGGHNSGSEEPRHEDLD 381

The following BLAST results are available for this feature:

BLAST of Csa1G043100.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNG1L_ARATH	1.2e-75	45.71	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1...	[more]
RING1_GOSHI	1.1e-73	45.58	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1	[more]
RHC1A_ARATH	7.9e-40	33.92	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2...	[more]
RDUF1_ARATH	1.5e-30	31.40	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1	[more]
RHC2A_ARATH	9.7e-30	34.70	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2...	[more]

BLAST of Csa1G043100.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTV3_CUCSA	3.1e-224	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1	[more]
W9T1E8_9ROSA	1.6e-124	61.64	E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1	[more]
A0A059AWT5_EUCGR	3.4e-106	54.59	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00641 PE=4 SV=1	[more]
A0A068TRB9_COFCA	1.1e-104	55.11	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022708001 PE=4 SV=1	[more]
F6HVS8_VITVI	1.9e-104	57.11	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00320 PE=4 SV=...	[more]

BLAST of Csa1G043100.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19950.1	6.6e-77	45.71	RING/U-box superfamily protein	[more]
AT5G56340.1	8.7e-45	41.06	RING/U-box superfamily protein	[more]
AT1G55530.1	2.8e-43	39.92	RING/U-box superfamily protein	[more]
AT2G40830.2	4.5e-41	33.92	RING-H2 finger C1A	[more]
AT3G13430.1	5.0e-40	34.67	RING/U-box superfamily protein	[more]

BLAST of Csa1G043100.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439501\|ref\|XP_004137524.1\|	4.4e-224	100.00	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]	[more]
gi\|659066950\|ref\|XP_008467256.1\|	1.2e-218	98.15	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]
gi\|703069031\|ref\|XP_010088395.1\|	2.3e-124	61.64	E3 ubiquitin-protein ligase RING1 [Morus notabilis]	[more]
gi\|1009133460\|ref\|XP_015883912.1\|	5.8e-115	59.64	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba]	[more]
gi\|645270190\|ref\|XP_008240345.1\|	7.8e-112	57.57	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G043100	Csa1G043100	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G043100.1	Csa1G043100.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G043100.1.cds1	Csa1G043100.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G043100.1.utr3p1	Csa1G043100.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 223..265 score: 1.6
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 224..264 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 224..265 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 220..275 score: 1.9
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 21..377 score: 8.0E
None	No IPR available	PANTHER	PTHR22763:SF5	E3 UBIQUITIN-PROTEIN LIGASE CIP8	coord: 21..377 score: 8.0E
None	No IPR available	PFAM	PF14369	zinc_ribbon_9	coord: 22..56 score: 2.0
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 212..272 score: 2.52