Csa1G043030.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATTTTAGGTTGAATACTTATTGCCGGAGACGAGCATCGTGAGCTGAGTGGAACAGTGACACTAATACTATCGTAGCACTGCCATTGCGCCCAAGTGTTGTTCTTCCATGGCGACTGCTCTGGCTGCGCTTCAATTCGCCTTCCTATCTCCTGCCGCTTCTAAAAAAATTGCATATCCCGTAAGTTTCTCTTCCAAATTTTGTTTAATTTACATGACCCCTACTAGTTTTTCAATCAAATTCCACTTAAAACTAGCTGAATCGCATGCTTGGTACTTCAAATTTGTTCTAGATACCATAGATTATAGTCTTTCTATCATGTATGTCTACTCTTTTCTAAAGAAGCTACGGGGTATTGTTCACCAGTTTTTCAGCTCTTCTGGGCGTAGAAATGGCGTACAATTCGTGGGTTGTGTTAATGCTTCCAACCCAAGAAATGCTCAAGGTGTCTTTCTTCTTTCTATTTTAGCTCTTTTTGTGAATTTAGTTTCCGAAATGACACTGTGTGTTTCAGGTGGCTTTGACCCTGATTTGCGTTCTGTGCTTGAGCTGGCCACGAATTCTGAATTGTATGAGCTTGAGCAAATCCTTTTCGGTCCCAGGTTGTTTTGCCTTCCTTTGTTGCATTGTTTAGTAGCATTTTAGCTATAGTGAGATTTTGTGCTTTGATACGGAAAGTGAGTATTAATATGCCAAAGTATGTTTGCTGGGATTTGTTTTTCTTAATTTTGGGAAGTGATGTAGGGAAAATGTTTTATCATGAAGTTTCTAGATTTCCAGATTACTTTCAGGAGGCTGATCTTGTATTGGTGACTTGCAGTTACTTCAGCCCATTGATGAAATCGATTACAAACAGAGGCCAGCCTGACTATGCCATGATTGAAGAAGACCTTGAAGAGAGAGACGGATTTATTTCATCGCTCGAGTCTCGATTCTTGTTTCTAGCAGCCGATGCTCGGTCGACGTTAAGGTTTCAAAATGCCTGATTAGAATTTATGCTTAGTTCTTATTTGTTGGTGTGTGAGGTCAATTGAAATTTCATGCTACCATAGCCATACTGTGTTGCATTACTGGAAATGTTTGCACACGTTTTACTGTAACTGTAGACTGTAGTTAACCTATGTGAGGCTGAATTAAAGATACTTATCTCAGATGGCTTATTCAAGAACTTTTCTACTCCTCGACTTTATGTGAATATCATGTCAATTATATGAATTTATTTCATATGTTGTTCTTGGAAGGGGTTGGAGACCATCTTATAGAGATGTCTTGCTTACAGTGAGAAAAAAGTTAAACGTTCTTTGCTCAACCAAGTTGTCATCTGAAGACCTTGAAGCAGAAATCTTTCTTCATTTGTTACAGGAATATGCAAGGTACTTCTCCTGGAACTGCATTTTAAGGTTGTAGCGGGTTAAGAGAGAATTTTATATTTTTAACTTGATCTTGTAAAATTCGGACGTCTTGCTATATCTTGATAGGTAATCACTGGATATATTGATACAAACACATACTTATCAGTGTGGATATAAATTTCAGTTTTAGCAGTCATGGTTAGAGTCTTAGAGAAAACCCAAAAATTTCATCAATACTTTGAGGAAGTATGCTGCAAAGCGTAGGAAACTAACTGGTGATTGTGCACTAAAATGATGAATTGGATTAGGCAAACATCTCAAATTAGGGATTTGTAACTACGAATGGATATTGCAGTACTAAATCACTAATGTCAATCATTTTAGAAATATTAAGAACTTTGTGAACAAAAGCCAATTAGTATTTCATTTTTTTCAATGCTGTAGGTTTATAATCTATTCAACGTGGTCTTTTAGTAACTAGGCAATCAAGTTTCATACACTAATCAAGTATATGTTGTCCTCTGTGTATGTTGGTAAGTTTGAAAACTTTATCCTTGTCCATGTAGTGAAGAATCAGTAAGGCAGGCTAACCTTGAAGGTACTCTACAACTTGGACTTGATCAGTGGAAGGTGCAAACTTCAGCAGCTACAGATGGAGCATCTGACTTGCAATCCTTGATACTAAGGGTATCAGTTTTATTAGATCTTTTCACGCATGGCATGTTTCATTTCTCATTTAACACCACTGCCTCCTGACATATCTGTCTTTCTCTTTACAGGGTGGTAGTTTGATAACTGTGGTTAAAATGTTTCAAGTGGTAATAATAATAATACACCATACAACCATCCTTTTTATTCTGAAATCCCTTTTCTTGAGAAACTTTCTTCTTTGCCAGTTTGCTAGGACCTTATCTGGGAAGGTGTTCCGAGAAGCAGCCAATTATCAAATTAAAAAGGAAATCATCAAAAAGGTACTTGGGAACATCTAAAACATTCTTCATATGTGGACCTAGAAATAAATACCATGGTTCAGAGAGCACAGCTTAAAGCAACTGAAAATGCCTTTCTTTGCTTTCATGCTCTTTTCTTCCAATTGGCATCTTTTACTTGGAAGTTTTTCTTTCTGAACCTGATTTGGTGGAATGGTTTTCTTTCTCCTCATGGGAACGAGGAATCTCTTTTGAAAGTATGGATGTTCCTTCATGGGAACAGGCAATATCTTATGACTTCGTTGAAGTGAGGGATCTCTTCTAAAAGCATGGAGGGGTGTGTGTGTGTGTGCTGTTACTGTGGTAGATTTGTTTATGAACTAAAGTTTAAGCCTTGTAGCTCTTAAAATTGTTCATGTCTACCTGAAAAGTCTATAAACCATTATCTTTTTACTGAGTGACGTCTGAGTTTAAGGAAAAGAAAATTTCATCCCCTAGATAACCAATCTTTATTCGAAATTTGATGTTTATAAAGTTCTCCCTCTGGTAACATAAAGTTCCAAAAAAACGTAGGATCTGCTTCTAATGCATGAGAGGTACCAACCTAGTTAGACTCTTAAGAACACATAAACTTATTGTCTATAACCTTGTACCTACCTATTTGTTTTGTAGCACGGTCTTTCCACAGTTTTCTGAAATGGAAAAGTTTTTAGTAAATTTTTTTGCCAGCAATCTGTGCTAAATTTTAAAATCATAATTGATTAAGAACATAACAAGTATGAAATAACATATCTGAAAACTCAATACTCAGTAGGTACCATTATTGTCAATACTCAATATCAATATAAATTACTGAACATGAACTGATAGTACAAATACTTATATGATTACCTTAACCTTTACTCTTTACCTTCCTGACTCTTTAGGGTGGACAGTTAGCTGCAGCAAATCTTGAGTCAAGAATAGCCTTGCTTGTTGCCCAAAAGGTGATTGTATTTTTTTTATTTTATTTTGCTTTTTGGCGATGTGATTTGTATGCCAGAGTATCAATTTGGGATGTGAAATCAGTAAGTAGCATGTTTGGAATAATTTTGGAAAAAATGCTTTTTAAACAAATTCATTTGTTCTATAAGCACATTTGATGGATTAAAAGTTTTTGTATAGTGATCAAATGCGTTTTTAAGGAAAATTTTGATTAACAAAAAAAATCCTTAAAAAAATTGGATTATTTTCAGAGACAGACTATCCAAAAATGATGGTAAAGTGATTAACAAAAAATATTCTGAAATATTATTGTAGTAAGAATTTTTGTTTAAACTACTAGTTAAAAATGTGAGACAAACTTTTCTACTGAAAAATTATTTTAAAAAGTGCTTATATAAGTTTTAGCCCATGCACATTCATTAGATACTCATTCAGCTTTATCTTTGAATATTGAGATATGTAGTTCTTGCAATTTGGACAGGGTCTTGCAGGTGCCGCTTCAAGGTATCTGGGTTTGAGAAGCATGATGACTTTGCTCGGCCCAATGTAATTAACCTTTTCTTATTCTCTCTCTAATAAGAAAAATGGTGAAAAGTGGATGGTTGCTTTCAATATTTTTCACTTACACTTTGTATGCAAGTATTTTTGCCTACCTGAGTTTTGTAACATTCAATAGGATATTGGTATTGATGGTGACTGTTGATTAGTGAATATTGTCAACTTCAAAAAGCCCACCTATTGAAACTTTTGGAGAGTAAACCAATCGAATGGCTTAGACCTTGGGTCTCATTGGATAACTCTTTTTTTGTTATATATATAAGAATTCAAAATTTTCTTTTAAGGTAGGGTGGAAACTATAACAAGAAAATTCAGAGGAAGCAAGTATAAATTTCAAGAACGTAGAACTAAAAAGAAAACGTTATCACACGGGAACTTAAATGTTTTGTTGTTCATGATTAGTTTAATGCCAAACAGTTCATAATTATTTGTATATGAATTAGGTTATGGGGAACATTTCTGGCGGATATGGTGATTCAGATGATGGGAACTGATTATGCTAGAATACTACGAGCAATTTATGCTTTTGCACAGGTAATCTTCCTTTGCCTACCTGTTGTACGACTCATTCACTTATAATCTTAGTGCGGGAGATATGAGCATGATAGCAAATAAAGGTCGCAATTAGGTTCACATTATAATCATTACCAGTCTAGTTTTTAATGGTTCAAATTGGTTGTTTCTCCAGTAGAGGCCTACTAATCAAACCTTTCCAAACCCAATAAATAATAGACCACTTGGAACCTTTTCCTTGATCGAGGGTTAGGTGGGTTTGACTTGACGTATATCATGGTTATATTACAATTCAATTTTGTGTTAGTTTCTAATAGGTTCTTGAACTTCTAATTTTGTTTTATAGGTCCTTAATGTATTCATTTTTTTAAAAAAAACTAATTGATGTTCTAGATATAAATTTGAATTTTATGTTTAATAGAATCCATAATTTTCTAATTTGTTAAGTAGATTTATGAATTTGAGGAAAAAGAATATTGAATAGGTCATGGATGTATTAGACATGACATTGAAAACTAAGGGGTCCGTTGATACAAAATTGAAAATTTAAGGAACTATTGAACACTTTCGAAAGTTGAGAACGAAATAGACACATATCTCCAAAAGTTCATGGACTAAATTTGTAATTTAATTAAATGATTGTTTTCCGAATCTGGTTGTGGCAACAAAACAAGTAGAATAGGTCTACTACCAGTTCCAACTATACCTTGGGCTCCAACAATTGCAAGTTTCTATGGAATCATAGAACCAAGTGGACAAGGAGAACTATAAAGTAAAAGAGAGGCAGAGGCAAAGGGGCAATAAGTAGTGGTAGCCAGGTAAGGATTAATGGAGGAATGCAAAGGAGGATTGAAGAATTAAAAACAAAAAAGAAATATGATGAATGTATCGACTTTGACAGGTTGGCTACATGATTAACCTTTGTTATATTGTTTTCCACTGCAAGATTTTAACACGAAACTTCAGAAATCTGTGGGATTGAAATGAAAGAACGATATGATTTGATTATTGATTACTTTACCTGGTATCTGAGAATATTGACTGTTTATGTCGCAGATTCGGATTATGCGCACGTATAGACTACCGTCGTCAACAAGTGACCAACAGAGTATATGAGCTTTTGGAAGCTGCACATTGCAAATCTAATCAACATCAAGATTTTGTTTCGCTTCCATCTCTGTATATAGCAAACCCAGTTGAAGTCAGATGAAATTTTTTTGTAATTTAACTTTGGACATTTACATTTTTTTTTATCAGTTTTG ATGGCGACTGCTCTGGCTGCGCTTCAATTCGCCTTCCTATCTCCTGCCGCTTCTAAAAAAATTGCATATCCCTTTTTCAGCTCTTCTGGGCGTAGAAATGGCGTACAATTCGTGGGTTGTGTTAATGCTTCCAACCCAAGAAATGCTCAAGGTGGCTTTGACCCTGATTTGCGTTCTGTGCTTGAGCTGGCCACGAATTCTGAATTGTATGAGCTTGAGCAAATCCTTTTCGGTCCCAGTTACTTCAGCCCATTGATGAAATCGATTACAAACAGAGGCCAGCCTGACTATGCCATGATTGAAGAAGACCTTGAAGAGAGAGACGGATTTATTTCATCGCTCGAGTCTCGATTCTTGTTTCTAGCAGCCGATGCTCGGTCGACGTTAAGGGGTTGGAGACCATCTTATAGAGATGTCTTGCTTACAGTGAGAAAAAAGTTAAACGTTCTTTGCTCAACCAAGTTGTCATCTGAAGACCTTGAAGCAGAAATCTTTCTTCATTTGTTACAGGAATATGCAAGTGAAGAATCAGTAAGGCAGGCTAACCTTGAAGGTACTCTACAACTTGGACTTGATCAGTGGAAGGTGCAAACTTCAGCAGCTACAGATGGAGCATCTGACTTGCAATCCTTGATACTAAGGGGTGGTAGTTTGATAACTGTGGTTAAAATGTTTCAAGTGTTTGCTAGGACCTTATCTGGGAAGGTGTTCCGAGAAGCAGCCAATTATCAAATTAAAAAGGAAATCATCAAAAAGGGTGGACAGTTAGCTGCAGCAAATCTTGAGTCAAGAATAGCCTTGCTTGTTGCCCAAAAGGGTCTTGCAGGTGCCGCTTCAAGGTATCTGGGTTTGAGAAGCATGATGACTTTGCTCGGCCCAATGTTATGGGGAACATTTCTGGCGGATATGGTGATTCAGATGATGGGAACTGATTATGCTAGAATACTACGAGCAATTTATGCTTTTGCACAGATTCGGATTATGCGCACGTATAGACTACCGTCGTCAACAAGTGACCAACAGAGTATATGA ATGGCGACTGCTCTGGCTGCGCTTCAATTCGCCTTCCTATCTCCTGCCGCTTCTAAAAAAATTGCATATCCCTTTTTCAGCTCTTCTGGGCGTAGAAATGGCGTACAATTCGTGGGTTGTGTTAATGCTTCCAACCCAAGAAATGCTCAAGGTGGCTTTGACCCTGATTTGCGTTCTGTGCTTGAGCTGGCCACGAATTCTGAATTGTATGAGCTTGAGCAAATCCTTTTCGGTCCCAGTTACTTCAGCCCATTGATGAAATCGATTACAAACAGAGGCCAGCCTGACTATGCCATGATTGAAGAAGACCTTGAAGAGAGAGACGGATTTATTTCATCGCTCGAGTCTCGATTCTTGTTTCTAGCAGCCGATGCTCGGTCGACGTTAAGGGGTTGGAGACCATCTTATAGAGATGTCTTGCTTACAGTGAGAAAAAAGTTAAACGTTCTTTGCTCAACCAAGTTGTCATCTGAAGACCTTGAAGCAGAAATCTTTCTTCATTTGTTACAGGAATATGCAAGTGAAGAATCAGTAAGGCAGGCTAACCTTGAAGGTACTCTACAACTTGGACTTGATCAGTGGAAGGTGCAAACTTCAGCAGCTACAGATGGAGCATCTGACTTGCAATCCTTGATACTAAGGGGTGGTAGTTTGATAACTGTGGTTAAAATGTTTCAAGTGTTTGCTAGGACCTTATCTGGGAAGGTGTTCCGAGAAGCAGCCAATTATCAAATTAAAAAGGAAATCATCAAAAAGGGTGGACAGTTAGCTGCAGCAAATCTTGAGTCAAGAATAGCCTTGCTTGTTGCCCAAAAGGGTCTTGCAGGTGCCGCTTCAAGGTATCTGGGTTTGAGAAGCATGATGACTTTGCTCGGCCCAATGTTATGGGGAACATTTCTGGCGGATATGGTGATTCAGATGATGGGAACTGATTATGCTAGAATACTACGAGCAATTTATGCTTTTGCACAGATTCGGATTATGCGCACGTATAGACTACCGTCGTCAACAAGTGACCAACAGAGTATATGA MATALAALQFAFLSPAASKKIAYPFFSSSGRRNGVQFVGCVNASNPRNAQGGFDPDLRSVLELATNSELYELEQILFGPSYFSPLMKSITNRGQPDYAMIEEDLEERDGFISSLESRFLFLAADARSTLRGWRPSYRDVLLTVRKKLNVLCSTKLSSEDLEAEIFLHLLQEYASEESVRQANLEGTLQLGLDQWKVQTSAATDGASDLQSLILRGGSLITVVKMFQVFARTLSGKVFREAANYQIKKEIIKKGGQLAAANLESRIALLVAQKGLAGAASRYLGLRSMMTLLGPMLWGTFLADMVIQMMGTDYARILRAIYAFAQIRIMRTYRLPSSTSDQQSI*
BLAST of Csa1G043030.1 vs. TrEMBL
Match: A0A0A0LT63_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043030 PE=4 SV=1) HSP 1 Score: 659.8 bits (1701), Expect = 1.8e-186 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1
BLAST of Csa1G043030.1 vs. TrEMBL
Match: V4TXE1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020853mg PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 8.4e-120 Identity = 234/351 (66.67%), Postives = 278/351 (79.20%), Query Frame = 1
BLAST of Csa1G043030.1 vs. TrEMBL
Match: A0A067DPC8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018537mg PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 8.4e-120 Identity = 234/351 (66.67%), Postives = 278/351 (79.20%), Query Frame = 1
BLAST of Csa1G043030.1 vs. TrEMBL
Match: D7U694_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g00930 PE=4 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 1.1e-116 Identity = 231/347 (66.57%), Postives = 270/347 (77.81%), Query Frame = 1
BLAST of Csa1G043030.1 vs. TrEMBL
Match: A0A059AVN8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00587 PE=4 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 1.8e-114 Identity = 226/334 (67.66%), Postives = 270/334 (80.84%), Query Frame = 1
BLAST of Csa1G043030.1 vs. TAIR10
Match: AT1G73470.3 (AT1G73470.3 unknown protein) HSP 1 Score: 376.7 bits (966), Expect = 1.5e-104 Identity = 201/339 (59.29%), Postives = 251/339 (74.04%), Query Frame = 1
BLAST of Csa1G043030.1 vs. NCBI nr
Match: gi|449439491|ref|XP_004137519.1| (PREDICTED: uncharacterized protein LOC101204111 [Cucumis sativus]) HSP 1 Score: 659.8 bits (1701), Expect = 2.5e-186 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1
BLAST of Csa1G043030.1 vs. NCBI nr
Match: gi|659066929|ref|XP_008467154.1| (PREDICTED: uncharacterized protein LOC103504561 isoform X3 [Cucumis melo]) HSP 1 Score: 627.9 bits (1618), Expect = 1.1e-176 Identity = 325/343 (94.75%), Postives = 332/343 (96.79%), Query Frame = 1
BLAST of Csa1G043030.1 vs. NCBI nr
Match: gi|659066927|ref|XP_008467146.1| (PREDICTED: uncharacterized protein LOC103504561 isoform X2 [Cucumis melo]) HSP 1 Score: 623.2 bits (1606), Expect = 2.6e-175 Identity = 325/344 (94.48%), Postives = 332/344 (96.51%), Query Frame = 1
BLAST of Csa1G043030.1 vs. NCBI nr
Match: gi|659066925|ref|XP_008467136.1| (PREDICTED: uncharacterized protein LOC103504561 isoform X1 [Cucumis melo]) HSP 1 Score: 620.5 bits (1599), Expect = 1.7e-174 Identity = 325/351 (92.59%), Postives = 332/351 (94.59%), Query Frame = 1
BLAST of Csa1G043030.1 vs. NCBI nr
Match: gi|659066931|ref|XP_008467162.1| (PREDICTED: uncharacterized protein LOC103504561 isoform X4 [Cucumis melo]) HSP 1 Score: 472.2 bits (1214), Expect = 7.5e-130 Identity = 246/258 (95.35%), Postives = 252/258 (97.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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