Csa1G033170.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G033170.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Glutathione s-transferase, putative; contains IPR012336 (Thioredoxin-like fold)
Location	Chr1 : 3531829 .. 3532062 (+)
Sequence length	234

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAGGAACATACAGTGATGCTTCATGGAATGTGGGCTAGCCCTTTTGTGAAAGGGGTCGAACTTGCCCTCAAAATCAAAGTCATTACTATTGAATCTGTGGAAGAAGATCTCCAAAACAAAACTCCAGAGCTTCTGAGCTTCAATCCCATTTACAAGAATGTTTCTGTACTGATCCACAGTGGAAAACCCATTTGTGAATCACTGGTGATTCTTGAAAACATCAACTAA

mRNA sequence

ATGGCAGAGGAACATACAGTGATGCTTCATGGAATGTGGGCTAGCCCTTTTGTGAAAGGGGTCGAACTTGCCCTCAAAATCAAAGTCATTACTATTGAATCTGTGGAAGAAGATCTCCAAAACAAAACTCCAGAGCTTCTGAGCTTCAATCCCATTTACAAGAATGTTTCTGTACTGATCCACAGTGGAAAACCCATTTGTGAATCACTGGTGATTCTTGAAAACATCAACTAA

Coding sequence (CDS)

ATGGCAGAGGAACATACAGTGATGCTTCATGGAATGTGGGCTAGCCCTTTTGTGAAAGGGGTCGAACTTGCCCTCAAAATCAAAGTCATTACTATTGAATCTGTGGAAGAAGATCTCCAAAACAAAACTCCAGAGCTTCTGAGCTTCAATCCCATTTACAAGAATGTTTCTGTACTGATCCACAGTGGAAAACCCATTTGTGAATCACTGGTGATTCTTGAAAACATCAACTAA

Protein sequence

MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLIHSGKPICESLVILENIN*

Homology

[Close]

BLAST of Csa1G033170.1 vs. Swiss-Prot
Match: GSTU5_ARATH (Glutathione S-transferase U5 OS=Arabidopsis thaliana GN=GSTU5 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.7e-17
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          MAE+  V L G+WASPF + VE+ALK+K I  E VEE L+NK+P LL+ NPI+K V VL+
Sbjct: 1  MAEKEEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLV 60

Query: 61 HSGKPICESLVILENIN 78
          H+GK I ES VILE I+
Sbjct: 61 HNGKTILESHVILEYID 77

[Close]

BLAST of Csa1G033170.1 vs. Swiss-Prot
Match: GSTU9_ARATH (Glutathione S-transferase U9 OS=Arabidopsis thaliana GN=GSTU9 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.7e-17
Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 1


Query: 4  EHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLIHSG 63
          E+ V+LHG +ASP+ K +ELAL++K I  + V+EDLQNK+  LL +NP++K + VL+H+G
Sbjct: 6  ENKVILHGSFASPYSKRIELALRLKSIPYQFVQEDLQNKSQTLLRYNPVHKKIPVLVHNG 65

Query: 64 KPICESLVILENIN 78
          KPI ESL I+E I+
Sbjct: 66 KPISESLFIIEYID 79

[Close]

BLAST of Csa1G033170.1 vs. Swiss-Prot
Match: GSTUA_ARATH (Glutathione S-transferase U10 OS=Arabidopsis thaliana GN=GSTU10 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1


Query: 7  VMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLIHSGKPI 66
          V+LHG W S + K VE+ALK+K +  E +EEDLQNK+  L+  NP++K + VL+H GKP+
Sbjct: 8  VILHGTWISTYSKRVEIALKLKGVLYEYLEEDLQNKSESLIQLNPVHKKIPVLVHDGKPV 67

Query: 67 CESLVILENIN 78
           ESLVILE I+
Sbjct: 68 AESLVILEYID 78

[Close]

BLAST of Csa1G033170.1 vs. Swiss-Prot
Match: GSTU7_ARATH (Glutathione S-transferase U7 OS=Arabidopsis thaliana GN=GSTU7 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.1e-15
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 1


Query: 7  VMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLIHSGKPI 66
          V L GMWASPF + +E+AL +K ++ E +E+D+ NK+  LL  NP++K + VL+H+GKPI
Sbjct: 10 VKLLGMWASPFSRRIEIALTLKGVSYEFLEQDITNKSSLLLQLNPVHKMIPVLVHNGKPI 69

Query: 67 CESLVILENIN 78
           ESLVILE I+
Sbjct: 70 SESLVILEYID 80

[Close]

BLAST of Csa1G033170.1 vs. Swiss-Prot
Match: GSTU8_ARATH (Glutathione S-transferase U8 OS=Arabidopsis thaliana GN=GSTU8 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.9e-15
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQ-NKTPELLSFNPIYKNVSVL 60
          M +E  V L G+W SPF K VE+ LK+K I  E +EED+  N++P LL +NPI+K V VL
Sbjct: 1  MNQEEHVKLLGLWGSPFSKRVEMVLKLKGIPYEYIEEDVYGNRSPMLLKYNPIHKKVPVL 60

Query: 61 IHSGKPICESLVILENI 77
          IH+G+ I ESLVI+E I
Sbjct: 61 IHNGRSIAESLVIVEYI 77

[Close]

BLAST of Csa1G033170.1 vs. TrEMBL
Match: A0A0A0LTD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033170 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.2e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI
Sbjct: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60

Query: 61 HSGKPICESLVILENIN 78
          HSGKPICESLVILENIN
Sbjct: 61 HSGKPICESLVILENIN 77

[Close]

BLAST of Csa1G033170.1 vs. TrEMBL
Match: A0A0A0LVI6_CUCSA (Glutathione s-transferase OS=Cucumis sativus GN=Csa_1G033160 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.6e-21
Identity = 51/76 (67.11%), Postives = 61/76 (80.26%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          M EE+ V+L+G+WASPFVK VELALKIK I  E VEED  NK+PELL FNP+YK V VL+
Sbjct: 1  MTEENKVVLYGLWASPFVKRVELALKIKAIPFEYVEEDFLNKSPELLKFNPVYKKVPVLV 60

Query: 61 HSGKPICESLVILENI 77
          H+G+PICES +I E I
Sbjct: 61 HNGRPICESAIIFEYI 76

[Close]

BLAST of Csa1G033170.1 vs. TrEMBL
Match: A0A0A0LSP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033140 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.5e-21
Identity = 50/76 (65.79%), Postives = 64/76 (84.21%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          MAE++ V+L+GMWASP+ K V+LALKIK I  + VEEDLQNK+P+LL FNP+YK V VL+
Sbjct: 1  MAEQNRVVLYGMWASPYAKRVQLALKIKGIPFQYVEEDLQNKSPDLLKFNPVYKKVPVLV 60

Query: 61 HSGKPICESLVILENI 77
          H+G+PICES +ILE I
Sbjct: 61 HNGRPICESALILEYI 76

[Close]

BLAST of Csa1G033170.1 vs. TrEMBL
Match: A0A0A0LTC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033120 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-20
Identity = 49/76 (64.47%), Postives = 64/76 (84.21%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          MA+++ V+L+GMWASP+ K V+LALKIK I  + VEEDLQNK+P+LL FNP+YK V VL+
Sbjct: 1  MADQNRVVLYGMWASPYAKRVQLALKIKGIPFQYVEEDLQNKSPDLLKFNPVYKKVPVLV 60

Query: 61 HSGKPICESLVILENI 77
          H+G+PICES +ILE I
Sbjct: 61 HNGRPICESALILEYI 76

[Close]

BLAST of Csa1G033170.1 vs. TrEMBL
Match: A0A068VLA6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00013515001 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-20
Identity = 49/74 (66.22%), Postives = 64/74 (86.49%), Query Frame = 1


Query: 4  EHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLIHSG 63
          E+ V+LHGMWASP+VK VELALKIK I  E VEE+L+NK+P+LL +NP++K V VL+H+G
Sbjct: 5  ENKVVLHGMWASPYVKRVELALKIKGIPFEYVEENLRNKSPQLLKYNPVHKKVPVLVHNG 64

Query: 64 KPICESLVILENIN 78
          KP+CESLVILE ++
Sbjct: 65 KPVCESLVILEYLD 78

[Close]

BLAST of Csa1G033170.1 vs. TAIR10
Match: AT2G29450.1 (AT2G29450.1 glutathione S-transferase tau 5)

HSP 1 Score: 87.8 bits (216), Expect = 3.2e-18
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          MAE+  V L G+WASPF + VE+ALK+K I  E VEE L+NK+P LL+ NPI+K V VL+
Sbjct: 1  MAEKEEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLV 60

Query: 61 HSGKPICESLVILENIN 78
          H+GK I ES VILE I+
Sbjct: 61 HNGKTILESHVILEYID 77

[Close]

BLAST of Csa1G033170.1 vs. TAIR10
Match: AT5G62480.1 (AT5G62480.1 glutathione S-transferase tau 9)

HSP 1 Score: 87.0 bits (214), Expect = 5.4e-18
Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 1


Query: 4  EHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLIHSG 63
          E+ V+LHG +ASP+ K +ELAL++K I  + V+EDLQNK+  LL +NP++K + VL+H+G
Sbjct: 6  ENKVILHGSFASPYSKRIELALRLKSIPYQFVQEDLQNKSQTLLRYNPVHKKIPVLVHNG 65

Query: 64 KPICESLVILENIN 78
          KPI ESL I+E I+
Sbjct: 66 KPISESLFIIEYID 79

[Close]

BLAST of Csa1G033170.1 vs. TAIR10
Match: AT1G74590.1 (AT1G74590.1 glutathione S-transferase TAU 10)

HSP 1 Score: 86.3 bits (212), Expect = 9.3e-18
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1


Query: 7  VMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLIHSGKPI 66
          V+LHG W S + K VE+ALK+K +  E +EEDLQNK+  L+  NP++K + VL+H GKP+
Sbjct: 8  VILHGTWISTYSKRVEIALKLKGVLYEYLEEDLQNKSESLIQLNPVHKKIPVLVHDGKPV 67

Query: 67 CESLVILENIN 78
           ESLVILE I+
Sbjct: 68 AESLVILEYID 78

[Close]

BLAST of Csa1G033170.1 vs. TAIR10
Match: AT2G29420.1 (AT2G29420.1 glutathione S-transferase tau 7)

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-16
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 1


Query: 7  VMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLIHSGKPI 66
          V L GMWASPF + +E+AL +K ++ E +E+D+ NK+  LL  NP++K + VL+H+GKPI
Sbjct: 10 VKLLGMWASPFSRRIEIALTLKGVSYEFLEQDITNKSSLLLQLNPVHKMIPVLVHNGKPI 69

Query: 67 CESLVILENIN 78
           ESLVILE I+
Sbjct: 70 SESLVILEYID 80

[Close]

BLAST of Csa1G033170.1 vs. TAIR10
Match: AT3G09270.1 (AT3G09270.1 glutathione S-transferase TAU 8)

HSP 1 Score: 80.9 bits (198), Expect = 3.9e-16
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQ-NKTPELLSFNPIYKNVSVL 60
          M +E  V L G+W SPF K VE+ LK+K I  E +EED+  N++P LL +NPI+K V VL
Sbjct: 1  MNQEEHVKLLGLWGSPFSKRVEMVLKLKGIPYEYIEEDVYGNRSPMLLKYNPIHKKVPVL 60

Query: 61 IHSGKPICESLVILENI 77
          IH+G+ I ESLVI+E I
Sbjct: 61 IHNGRSIAESLVIVEYI 77

[Close]

BLAST of Csa1G033170.1 vs. NCBI nr
Match: gi|700208901|gb|KGN63997.1| (hypothetical protein Csa_1G033170 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 4.6e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI
Sbjct: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60

Query: 61 HSGKPICESLVILENIN 78
          HSGKPICESLVILENIN
Sbjct: 61 HSGKPICESLVILENIN 77

[Close]

BLAST of Csa1G033170.1 vs. NCBI nr
Match: gi|778656835|ref|XP_004151688.2| (PREDICTED: glutathione S-transferase U9-like [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 3.8e-21
Identity = 51/76 (67.11%), Postives = 61/76 (80.26%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          M EE+ V+L+G+WASPFVK VELALKIK I  E VEED  NK+PELL FNP+YK V VL+
Sbjct: 1  MTEENKVVLYGLWASPFVKRVELALKIKAIPFEYVEEDFLNKSPELLKFNPVYKKVPVLV 60

Query: 61 HSGKPICESLVILENI 77
          H+G+PICES +I E I
Sbjct: 61 HNGRPICESAIIFEYI 76

[Close]

BLAST of Csa1G033170.1 vs. NCBI nr
Match: gi|778656832|ref|XP_011649756.1| (PREDICTED: glutathione S-transferase U9-like [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 6.5e-21
Identity = 50/76 (65.79%), Postives = 64/76 (84.21%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          MAE++ V+L+GMWASP+ K V+LALKIK I  + VEEDLQNK+P+LL FNP+YK V VL+
Sbjct: 1  MAEQNRVVLYGMWASPYAKRVQLALKIKGIPFQYVEEDLQNKSPDLLKFNPVYKKVPVLV 60

Query: 61 HSGKPICESLVILENI 77
          H+G+PICES +ILE I
Sbjct: 61 HNGRPICESALILEYI 76

[Close]

BLAST of Csa1G033170.1 vs. NCBI nr
Match: gi|661869435|emb|CDP21575.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-20
Identity = 49/74 (66.22%), Postives = 64/74 (86.49%), Query Frame = 1


Query: 4  EHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLIHSG 63
          E+ V+LHGMWASP+VK VELALKIK I  E VEE+L+NK+P+LL +NP++K V VL+H+G
Sbjct: 5  ENKVVLHGMWASPYVKRVELALKIKGIPFEYVEENLRNKSPQLLKYNPVHKKVPVLVHNG 64

Query: 64 KPICESLVILENIN 78
          KP+CESLVILE ++
Sbjct: 65 KPVCESLVILEYLD 78

[Close]

BLAST of Csa1G033170.1 vs. NCBI nr
Match: gi|778656826|ref|XP_004137407.2| (PREDICTED: glutathione S-transferase U9-like [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-20
Identity = 49/76 (64.47%), Postives = 64/76 (84.21%), Query Frame = 1


Query: 1  MAEEHTVMLHGMWASPFVKGVELALKIKVITIESVEEDLQNKTPELLSFNPIYKNVSVLI 60
          MA+++ V+L+GMWASP+ K V+LALKIK I  + VEEDLQNK+P+LL FNP+YK V VL+
Sbjct: 1  MADQNRVVLYGMWASPYAKRVQLALKIKGIPFQYVEEDLQNKSPDLLKFNPVYKKVPVLV 60

Query: 61 HSGKPICESLVILENI 77
          H+G+PICES +ILE I
Sbjct: 61 HNGRPICESALILEYI 76

The following BLAST results are available for this feature:

BLAST of Csa1G033170.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GSTU5_ARATH	5.7e-17	59.74	Glutathione S-transferase U5 OS=Arabidopsis thaliana GN=GSTU5 PE=2 SV=1	[more]
GSTU9_ARATH	9.7e-17	54.05	Glutathione S-transferase U9 OS=Arabidopsis thaliana GN=GSTU9 PE=2 SV=1	[more]
GSTUA_ARATH	1.6e-16	54.93	Glutathione S-transferase U10 OS=Arabidopsis thaliana GN=GSTU10 PE=2 SV=1	[more]
GSTU7_ARATH	4.1e-15	53.52	Glutathione S-transferase U7 OS=Arabidopsis thaliana GN=GSTU7 PE=2 SV=1	[more]
GSTU8_ARATH	6.9e-15	54.55	Glutathione S-transferase U8 OS=Arabidopsis thaliana GN=GSTU8 PE=2 SV=1	[more]

BLAST of Csa1G033170.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTD4_CUCSA	3.2e-35	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033170 PE=4 SV=1	[more]
A0A0A0LVI6_CUCSA	2.6e-21	67.11	Glutathione s-transferase OS=Cucumis sativus GN=Csa_1G033160 PE=3 SV=1	[more]
A0A0A0LSP6_CUCSA	4.5e-21	65.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033140 PE=3 SV=1	[more]
A0A0A0LTC3_CUCSA	1.0e-20	64.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033120 PE=3 SV=1	[more]
A0A068VLA6_COFCA	1.0e-20	66.22	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00013515001 PE=4 SV=1	[more]

BLAST of Csa1G033170.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G29450.1	3.2e-18	59.74	glutathione S-transferase tau 5	[more]
AT5G62480.1	5.4e-18	54.05	glutathione S-transferase tau 9	[more]
AT1G74590.1	9.3e-18	54.93	glutathione S-transferase TAU 10	[more]
AT2G29420.1	2.3e-16	53.52	glutathione S-transferase tau 7	[more]
AT3G09270.1	3.9e-16	54.55	glutathione S-transferase TAU 8	[more]

BLAST of Csa1G033170.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208901\|gb\|KGN63997.1\|	4.6e-35	100.00	hypothetical protein Csa_1G033170 [Cucumis sativus]	[more]
gi\|778656835\|ref\|XP_004151688.2\|	3.8e-21	67.11	PREDICTED: glutathione S-transferase U9-like [Cucumis sativus]	[more]
gi\|778656832\|ref\|XP_011649756.1\|	6.5e-21	65.79	PREDICTED: glutathione S-transferase U9-like [Cucumis sativus]	[more]
gi\|661869435\|emb\|CDP21575.1\|	1.4e-20	66.22	unnamed protein product [Coffea canephora]	[more]
gi\|778656826\|ref\|XP_004137407.2\|	1.4e-20	64.47	PREDICTED: glutathione S-transferase U9-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004045	Glutathione_S-Trfase_N
IPR012336	Thioredoxin-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0010583	response to cyclopentenone
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G033170	Csa1G033170	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G033170.1	Csa1G033170.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G033170.1.cds1	Csa1G033170.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004045	Glutathione S-transferase, N-terminal	PFAM	PF02798	GST_N	coord: 7..74 score: 1.7
IPR004045	Glutathione S-transferase, N-terminal	PROFILE	PS50404	GST_NTER	coord: 5..77 score: 1
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 5..75 score: 3.2
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 4..76 score: 4.58
None	No IPR available	PANTHER	PTHR11260	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	coord: 1..77 score: 5.2
None	No IPR available	PANTHER	PTHR11260:SF221	GLUTATHIONE S-TRANSFERASE U9	coord: 1..77 score: 5.2