Csa1G011590.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G011590.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	F-box family protein; contains IPR001810 (F-box domain, cyclin-like), IPR011043 (Galactose oxidase/kelch, beta-propeller), IPR017451 (F-box associated interaction domain)
Location	Chr1 : 1690016 .. 1691218 (+)
Sequence length	1203

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTACGGATTGGGTTAGTGGGCTTCCATCCGATATTGGTAAGACAATCTTCTCCAAACTTCTTGTTTCCAATTTACCAGCTTGTAGAGTTGTATGTAAAGCTTGGAATGAGTTGATTTTAGATCATGCTTCCTCAGCTTCTAAATTCCTTACAAATGATTTCATTCTATTTACCTGTGATGTACTCCATCCCTTCCCCTGTCCTGATAATCATACCAATCCCAACATGCATTGTTTACGTTTTGATAATTTAGATTTGGATTTGGATTTGGATTTAGAATTGGAAGTGAATAAATCCTCCAGCTTTGAGGCCGGCGTCGTTTACAAACTCATTAATTCTTGCAATGGCCTCCTGCTTATCTACAAACTCCCTCTTTGTTTCCCCGGCGAATTCCTTTTGCGTGTCGGCATATTTAATCCAATGACCAATGAGTTCTTCCAAGTTCCTCATGATGAGATTGTTGAGTACCATTATGGGTTTGGTTTCATCCCTGCCACAAAGCAGTACAAATTATTTAGAGTCAACTTCCCGCTTAATGTACGGCCGGAAGAACCCAATTCTGTTTCTCACTTGGATGTTTTGACGTTTGGTAGAAGTGAAATCATCGACCCTAAACAATCCCAATGGAGACGTCTTTACTCCCTACCTGGTGGCGTCGAGAATCATGGTGCTCATGTGAATGGAGTTATCTATTGGTTGGGAGAAGGAAAAGAACAAAATGAGTATGTGGTGTATACTCTCGACGTTGAAACTGAAAAAATTCAATTAAGTGCTGTCTTGGAAGTTGTCAATCCCATGTGGATGTCTATACAACAATTTAATGGTACTGTTTATGCAGTTTTTCATATGGAAGAAGCAACTCAAGTGTGGAGGATGCAGGAGAAAAACTCATGGATTAGAGATTTTGTTATTGATGATTGCAACCTTACTCTCGTGAAAGCCTATGAAAATGGTGAGATGTTGTGTATGGTCAAACCAACCGTTTTTTGGTTGTATAATCCTTCAACCGGGAGTAAGAAGGTTCTATCACTCAGGAATGAGAAAAAGATATTTTTAGGCATTTGTCACCTAGAATTGAATTTTGGCTCTCTTCTAAACATTTTGGCCGGTGATGAGAGTGTTGATGAAGTTCTAATTAAGAGAAACAAAGCAAAGAGAAGCAGAAGCAAAGCAAAGAGAAGCAGAAGCCATGGATGA

mRNA sequence

ATGGAGATTACGGATTGGGTTAGTGGGCTTCCATCCGATATTGGTAAGACAATCTTCTCCAAACTTCTTGTTTCCAATTTACCAGCTTGTAGAGTTGTATGTAAAGCTTGGAATGAGTTGATTTTAGATCATGCTTCCTCAGCTTCTAAATTCCTTACAAATGATTTCATTCTATTTACCTGTGATGTACTCCATCCCTTCCCCTGTCCTGATAATCATACCAATCCCAACATGCATTGTTTACGTTTTGATAATTTAGATTTGGATTTGGATTTGGATTTAGAATTGGAAGTGAATAAATCCTCCAGCTTTGAGGCCGGCGTCGTTTACAAACTCATTAATTCTTGCAATGGCCTCCTGCTTATCTACAAACTCCCTCTTTGTTTCCCCGGCGAATTCCTTTTGCGTGTCGGCATATTTAATCCAATGACCAATGAGTTCTTCCAAGTTCCTCATGATGAGATTGTTGAGTACCATTATGGGTTTGGTTTCATCCCTGCCACAAAGCAGTACAAATTATTTAGAGTCAACTTCCCGCTTAATGTACGGCCGGAAGAACCCAATTCTGTTTCTCACTTGGATGTTTTGACGTTTGGTAGAAGTGAAATCATCGACCCTAAACAATCCCAATGGAGACGTCTTTACTCCCTACCTGGTGGCGTCGAGAATCATGGTGCTCATGTGAATGGAGTTATCTATTGGTTGGGAGAAGGAAAAGAACAAAATGAGTATGTGGTGTATACTCTCGACGTTGAAACTGAAAAAATTCAATTAAGTGCTGTCTTGGAAGTTGTCAATCCCATGTGGATGTCTATACAACAATTTAATGGTACTGTTTATGCAGTTTTTCATATGGAAGAAGCAACTCAAGTGTGGAGGATGCAGGAGAAAAACTCATGGATTAGAGATTTTGTTATTGATGATTGCAACCTTACTCTCGTGAAAGCCTATGAAAATGGTGAGATGTTGTGTATGGTCAAACCAACCGTTTTTTGGTTGTATAATCCTTCAACCGGGAGTAAGAAGGTTCTATCACTCAGGAATGAGAAAAAGATATTTTTAGGCATTTGTCACCTAGAATTGAATTTTGGCTCTCTTCTAAACATTTTGGCCGGTGATGAGAGTGTTGATGAAGTTCTAATTAAGAGAAACAAAGCAAAGAGAAGCAGAAGCAAAGCAAAGAGAAGCAGAAGCCATGGATGA

Coding sequence (CDS)

ATGGAGATTACGGATTGGGTTAGTGGGCTTCCATCCGATATTGGTAAGACAATCTTCTCCAAACTTCTTGTTTCCAATTTACCAGCTTGTAGAGTTGTATGTAAAGCTTGGAATGAGTTGATTTTAGATCATGCTTCCTCAGCTTCTAAATTCCTTACAAATGATTTCATTCTATTTACCTGTGATGTACTCCATCCCTTCCCCTGTCCTGATAATCATACCAATCCCAACATGCATTGTTTACGTTTTGATAATTTAGATTTGGATTTGGATTTGGATTTAGAATTGGAAGTGAATAAATCCTCCAGCTTTGAGGCCGGCGTCGTTTACAAACTCATTAATTCTTGCAATGGCCTCCTGCTTATCTACAAACTCCCTCTTTGTTTCCCCGGCGAATTCCTTTTGCGTGTCGGCATATTTAATCCAATGACCAATGAGTTCTTCCAAGTTCCTCATGATGAGATTGTTGAGTACCATTATGGGTTTGGTTTCATCCCTGCCACAAAGCAGTACAAATTATTTAGAGTCAACTTCCCGCTTAATGTACGGCCGGAAGAACCCAATTCTGTTTCTCACTTGGATGTTTTGACGTTTGGTAGAAGTGAAATCATCGACCCTAAACAATCCCAATGGAGACGTCTTTACTCCCTACCTGGTGGCGTCGAGAATCATGGTGCTCATGTGAATGGAGTTATCTATTGGTTGGGAGAAGGAAAAGAACAAAATGAGTATGTGGTGTATACTCTCGACGTTGAAACTGAAAAAATTCAATTAAGTGCTGTCTTGGAAGTTGTCAATCCCATGTGGATGTCTATACAACAATTTAATGGTACTGTTTATGCAGTTTTTCATATGGAAGAAGCAACTCAAGTGTGGAGGATGCAGGAGAAAAACTCATGGATTAGAGATTTTGTTATTGATGATTGCAACCTTACTCTCGTGAAAGCCTATGAAAATGGTGAGATGTTGTGTATGGTCAAACCAACCGTTTTTTGGTTGTATAATCCTTCAACCGGGAGTAAGAAGGTTCTATCACTCAGGAATGAGAAAAAGATATTTTTAGGCATTTGTCACCTAGAATTGAATTTTGGCTCTCTTCTAAACATTTTGGCCGGTGATGAGAGTGTTGATGAAGTTCTAATTAAGAGAAACAAAGCAAAGAGAAGCAGAAGCAAAGCAAAGAGAAGCAGAAGCCATGGATGA

Protein sequence

MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFTCDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSWIRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLELNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG*

Homology

[Close]

BLAST of Csa1G011590.1 vs. Swiss-Prot
Match: FB135_ARATH (F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08
Identity = 101/421 (23.99%), Postives = 157/421 (37.29%), Query Frame = 1


Query: 2   EITDWVSG---------LPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHA--SSASK 61
           +ITD V G         LP DI   IFS+L +S++     VC++W  ++  H   SS+S 
Sbjct: 11  KITDDVDGVGVGGGLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSS 70

Query: 62  FLTNDFILFTCDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVV- 121
             T   +L  CD            +P  + L F      LDL  E +  K+  F      
Sbjct: 71  SPTKPCLLLHCD------------SPIRNGLHF------LDLSEEEKRIKTKKFTLRFAS 130

Query: 122 ----YKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVP------HDEIVEYH 181
               + ++ SCNGLL +          +   + ++NP T    ++P      HD+  E  
Sbjct: 131 SMPEFDVVGSCNGLLCL------SDSLYNDSLYLYNPFTTNSLELPECSNKYHDQ--ELV 190

Query: 182 YGFGFIPATKQYKLFRV----------NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQS 241
           +GFGF   TK+YK+ ++          N     R       S + +LT   S+  D   S
Sbjct: 191 FGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLS-SKTTDQSLS 250

Query: 242 QWRRLYSLPGGV--ENHGAHVNGVIYWLGEGKE---QNEYVVYTLDVETEKIQLSAVLEV 301
            WR L   P      +  A VNG ++++   +      ++V + L+ E  K         
Sbjct: 251 -WRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGG 310

Query: 302 VNPMWMSIQQFNGTVYAVFHMEEA-TQVWRMQE---KNSWIRDFVIDDC----------- 359
           +N     +    G + AV +       +W M+    K SW +++ I              
Sbjct: 311 LNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDR 370

[Close]

BLAST of Csa1G011590.1 vs. TrEMBL
Match: A0A0A0LSE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 9.8e-237
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1


Query: 1   MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT 60
           MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT
Sbjct: 1   MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT 60

Query: 61  CDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL 120
           CDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL
Sbjct: 61  CDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL 120

Query: 121 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL 180
           LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL
Sbjct: 121 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL 180

Query: 181 NVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 240
           NVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE
Sbjct: 181 NVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 240

Query: 241 QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW 300
           QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW
Sbjct: 241 QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW 300

Query: 301 IRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE 360
           IRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE
Sbjct: 301 IRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE 360

Query: 361 LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG 401
           LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG
Sbjct: 361 LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG 400

[Close]

BLAST of Csa1G011590.1 vs. TrEMBL
Match: A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.4e-73
Identity = 181/396 (45.71%), Postives = 240/396 (60.61%), Query Frame = 1


Query: 9   GLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCD-VLHP 68
           GLP  I KTIFSKL++S+LP+CR+V   WN+L+LD+ASS   +FL N F+L T D  L+ 
Sbjct: 25  GLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQFLKNAFLLSTSDRGLNY 84

Query: 69  FPCPDNHTNPNMHCLRFDNLDL--DLDLDLELEVNKSSS--FEAGVVYKLI--NSCNGLL 128
             C     NP MHC+  D   L  D D DLE E  KS+S  F+    Y +I   SCNGL+
Sbjct: 85  KLC-----NPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWTYTIIMAGSCNGLM 144

Query: 129 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVNF 188
           LI K       ++    GIFNPMTNEF QV      +  Y YGFGF P TKQYKLFRV F
Sbjct: 145 LISKC-----SDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQYKLFRV-F 204

Query: 189 PLNVRPEEPNSV--SH--LDVLTFGRSEIID--PKQSQWRRLYSLPGGVENHGAHVNGVI 248
               R    +S   +H  ++VLTFGRS      P  +QWRRL++LP  +   G ++NG+I
Sbjct: 205 DKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEIVADGVYLNGII 264

Query: 249 YWLGEGK---EQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHM---- 308
           YWL + K   ++ +YV+Y LDVETE I+++ VL+V +  +  I QFNGT+YA FH+    
Sbjct: 265 YWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNGTIYATFHINWEK 324

Query: 309 -EEATQVWRMQEKNSWIRDFVIDD-----CNLTLVKAYENGEMLCMVKPTVFWLYNPSTG 368
                QVWRMQEK+SW+R FVI D      +L L+K +E+ E+L M+    F  YNPS+ 
Sbjct: 325 DSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMINMDFFCFYNPSSK 384

Query: 369 SKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAGDE 375
            K+++S   +KK +  IC +E LNFG L  IL G +
Sbjct: 385 KKRIISKNQKKKRY--ICQIESLNFGRLSQILEGTQ 407

[Close]

BLAST of Csa1G011590.1 vs. TrEMBL
Match: A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.4e-72
Identity = 175/400 (43.75%), Postives = 235/400 (58.75%), Query Frame = 1


Query: 5   DWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDV 64
           DW  GLP  I KTIFSKL++SNLP+CR VCK WN L+L +ASS   +FLTN F+L T D 
Sbjct: 37  DWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSDR 96

Query: 65  LHPFPCPDNHTNPNMHCLRFDNLDL--DLDLDLELEVNKSSSFEA----GVVYKLINSCN 124
           +  +       NP MHC+  DN     D+D DLE E  KS S +       +  L + CN
Sbjct: 97  MLNYEL----CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQFYGDWTFMILLAHPCN 156

Query: 125 GLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFR 184
           GL+ I K       ++    GIFNPMTNEFFQV   +  +  YHYGFG    +KQYKLFR
Sbjct: 157 GLMFISKC-----SDYTWCQGIFNPMTNEFFQVSEQDTFDDFYHYGFGLSAISKQYKLFR 216

Query: 185 VN--------FPLNVRPEEPNSVSHLDVLTFGRSEIID-PKQSQWRRLYSLPGGVENHGA 244
           V+        F L +     ++   ++VLTFGRS     P  +QWR L++L   +  HG 
Sbjct: 217 VSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWRHLHNLSCDL-IHGV 276

Query: 245 HVNGVIYWLGE---GKEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVF 304
           ++NG+IYWLG+    KE+ EYV+Y LDVETE+I++S +L+ V      +  FNGT+YA+F
Sbjct: 277 YLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQ-VQASDGKMHPFNGTIYALF 336

Query: 305 HM-----EEATQVWRMQEKNSWIRDFVIDDCN-----LTLVKAYENGEMLCMVKPTVFWL 364
           ++         QVW MQEK SWIR FVI D +     L L+K +E+GE+L ++    F  
Sbjct: 337 YINWEKDSRTIQVWSMQEKCSWIRQFVIRDISKEWGCLELIKIFEDGEILFLIDSDFFCF 396

Query: 365 YNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAG 373
           Y+P T  K+++S   +K  F  +C +E LNFGSL  IL G
Sbjct: 397 YHPLTEKKRIISKNQKKNRF--VCQIECLNFGSLPEILEG 423

[Close]

BLAST of Csa1G011590.1 vs. TrEMBL
Match: A0A0A0LUP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014430 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.1e-62
Identity = 163/399 (40.85%), Postives = 227/399 (56.89%), Query Frame = 1


Query: 5   DWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDV 64
           DW  GLP  I K IFSKL++SNLP+CR VCK WN L+L +ASS   +FLTN F+L T D 
Sbjct: 37  DWGKGLPPLIAKIIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSDQ 96

Query: 65  LHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEA----GVVYKLINSCNGL 124
           +  +       NP MH +  DN     D+DLE+E  KS SF+       +  + + CNGL
Sbjct: 97  MLNYEL----CNPKMHSINLDNTQCSDDVDLEMEFIKSGSFQFYGDWTFMILMAHPCNGL 156

Query: 125 LLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVN 184
           + I K       ++    GIFNPMTNEFFQV   +  +  Y+YGFG  P TKQYKLFR +
Sbjct: 157 VFISKC-----SDYTWCQGIFNPMTNEFFQVSEQDTFDDFYNYGFGLSPVTKQYKLFRTS 216

Query: 185 --FPLNVRPEEPNSVS------HLDVLTFGRSEIID-PKQSQWRRLYSLPGG--VENHGA 244
              P + R    ++ S       ++VLTFGRS     P  +QWR L++L     V + G 
Sbjct: 217 KAIPYSKRFRLVSTCSTDDTHYMMEVLTFGRSGTNHIPIHNQWRHLHNLSYDIVVGDGGV 276

Query: 245 HVNGVIY-WLGEG-KEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFH 304
           ++NG+I+ W  +  K + +Y +Y LD ETE+I++S +L+ V+     +  FNGT+YA F+
Sbjct: 277 YLNGIIFGWEKKNVKRKRKYDIYALDDETEQIEMSVILQ-VHARDGKMHLFNGTIYATFY 336

Query: 305 M-----EEATQVWRMQEKNSWIRDFVIDDCN-----LTLVKAYENGEMLCMVKPTVFWLY 364
                 +   QVW MQEK+SWIR FVI D +     L L+K +++G++        F+ Y
Sbjct: 337 TNWEKDDLTVQVWSMQEKHSWIRKFVISDISKQWSCLELIKMFKDGDI-----SDFFYFY 396

Query: 365 NPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAG 373
           NP T  K ++S   +KK    +C +E LNFGSL  I  G
Sbjct: 397 NPLTKKKSIISKDQKKKSC--VCQIECLNFGSLPKIFDG 418

[Close]

BLAST of Csa1G011590.1 vs. TrEMBL
Match: A0A0A0LRY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.4e-57
Identity = 167/397 (42.07%), Postives = 226/397 (56.93%), Query Frame = 1


Query: 3   ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTC 62
           I DW   LP+ IG TIFSKL++SNLP CR+VC+ WN ++LD+AS+   + LT   ++ T 
Sbjct: 15  IMDW-GRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQFQCLTTALLICTN 74

Query: 63  DVLHPFPCPDNHTNPN--MHCLRFD---NLDLDLDLDLELEVNKSSSFEAGVVYKLINSC 122
           D    F    +  N N  M C+ FD   +L  + DLD EL  + S  F+      +I+ C
Sbjct: 75  DEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLLFDGNWSIHIISQC 134

Query: 123 NGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVP-HDEIVEYHYGFGFIPATKQYKLFR 182
           NGLL +      + G  L   GIFNPMTNEF Q+P HDE      GFG   +TKQYKLFR
Sbjct: 135 NGLLYVITNNYEYHG--LYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGCGISTKQYKLFR 194

Query: 183 V--NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSL--PGGVENHGAHVNGV 242
           V   FP   R  E      +DVL FG         ++WR L  L  P  V    A++NGV
Sbjct: 195 VRTTFP---RGGEGRKGMEMDVLRFG-------NDNKWRYLPFLPSPSHVFVCSAYLNGV 254

Query: 243 IYWLGEGK-EQNEYVVYTLDVETEKIQLSAVLEV--VNPMWMSIQQFNGTVYAVF--HME 302
           IYWLG+ + ++NE V++  DVETEK + S +L+V  V+   +++ +F  T+YA F     
Sbjct: 255 IYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMTY 314

Query: 303 EATQVWRMQEKNSWIRD-FVIDDC-----NLTLVKAYENGE-MLCMVKPTVFWLYNPSTG 362
           ++ QVW+MQEK SWI +  V+DD      +LT+++A E+ E +LCMV    F  YN   G
Sbjct: 315 DSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIFG 374

Query: 363 --SKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAGD 374
              KKV+    EK  F  I  +E LNFGSL NIL+G+
Sbjct: 375 RRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGE 398

[Close]

BLAST of Csa1G011590.1 vs. TAIR10
Match: AT3G07870.1 (AT3G07870.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-09
Identity = 101/421 (23.99%), Postives = 157/421 (37.29%), Query Frame = 1


Query: 2   EITDWVSG---------LPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHA--SSASK 61
           +ITD V G         LP DI   IFS+L +S++     VC++W  ++  H   SS+S 
Sbjct: 11  KITDDVDGVGVGGGLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSS 70

Query: 62  FLTNDFILFTCDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVV- 121
             T   +L  CD            +P  + L F      LDL  E +  K+  F      
Sbjct: 71  SPTKPCLLLHCD------------SPIRNGLHF------LDLSEEEKRIKTKKFTLRFAS 130

Query: 122 ----YKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVP------HDEIVEYH 181
               + ++ SCNGLL +          +   + ++NP T    ++P      HD+  E  
Sbjct: 131 SMPEFDVVGSCNGLLCL------SDSLYNDSLYLYNPFTTNSLELPECSNKYHDQ--ELV 190

Query: 182 YGFGFIPATKQYKLFRV----------NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQS 241
           +GFGF   TK+YK+ ++          N     R       S + +LT   S+  D   S
Sbjct: 191 FGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLS-SKTTDQSLS 250

Query: 242 QWRRLYSLPGGV--ENHGAHVNGVIYWLGEGKE---QNEYVVYTLDVETEKIQLSAVLEV 301
            WR L   P      +  A VNG ++++   +      ++V + L+ E  K         
Sbjct: 251 -WRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGG 310

Query: 302 VNPMWMSIQQFNGTVYAVFHMEEA-TQVWRMQE---KNSWIRDFVIDDC----------- 359
           +N     +    G + AV +       +W M+    K SW +++ I              
Sbjct: 311 LNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDR 370

[Close]

BLAST of Csa1G011590.1 vs. TAIR10
Match: AT1G33020.1 (AT1G33020.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 49.7 bits (117), Expect = 4.9e-06
Identity = 58/263 (22.05%), Postives = 106/263 (40.30%), Query Frame = 1


Query: 7   VSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDF----ILFTCD 66
           +  +P+D+   IFS++   ++  CR V K W  + L H      FLT       +LF   
Sbjct: 7   LDSIPTDLILEIFSRMSTKSIGRCRCVSKLWKSM-LGHPYFTELFLTRSSDHPRLLFGVK 66

Query: 67  -----VLHPFPCP-DNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSC 126
                +    P P D +   ++     +  D  ++   ++  N+ + + +G +Y      
Sbjct: 67  RERQWLFFSSPQPQDLYEKSSLVDFHMNFSDFHMNFSGDIRRNECT-YVSGFIYFPRKRI 126

Query: 127 NGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRV 186
              L  +++             I NP+T ++  +      E     GF P  KQ+K+ R+
Sbjct: 127 KNYLCDFRV-------------ICNPITGQYAILQLITFHEKRSFLGFDPIDKQFKVLRM 186

Query: 187 NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHV--NGVIYW 246
            +       +   V H  +LT      ++P + +WR++   P   E     +  NGV+Y+
Sbjct: 187 KY------NDRGIVVH-HILT------LEPGKMRWRKI-RCPLAHEPFWEEICANGVLYY 240

Query: 247 LGEGKEQNEYVVYTLDVETEKIQ 258
           L E  +   YV+   DV +EK +
Sbjct: 247 LAEPTDGGSYVICCFDVRSEKFK 240

[Close]

BLAST of Csa1G011590.1 vs. NCBI nr
Match: gi|778664711|ref|XP_011660339.1| (PREDICTED: putative F-box protein At1g32420 [Cucumis sativus])

HSP 1 Score: 827.0 bits (2135), Expect = 1.4e-236
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1


Query: 1   MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT 60
           MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT
Sbjct: 1   MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT 60

Query: 61  CDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL 120
           CDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL
Sbjct: 61  CDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL 120

Query: 121 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL 180
           LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL
Sbjct: 121 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL 180

Query: 181 NVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 240
           NVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE
Sbjct: 181 NVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 240

Query: 241 QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW 300
           QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW
Sbjct: 241 QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW 300

Query: 301 IRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE 360
           IRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE
Sbjct: 301 IRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE 360

Query: 361 LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG 401
           LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG
Sbjct: 361 LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG 400

[Close]

BLAST of Csa1G011590.1 vs. NCBI nr
Match: gi|700210076|gb|KGN65172.1| (hypothetical protein Csa_1G257290 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 3.4e-73
Identity = 181/396 (45.71%), Postives = 240/396 (60.61%), Query Frame = 1


Query: 9   GLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCD-VLHP 68
           GLP  I KTIFSKL++S+LP+CR+V   WN+L+LD+ASS   +FL N F+L T D  L+ 
Sbjct: 25  GLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQFLKNAFLLSTSDRGLNY 84

Query: 69  FPCPDNHTNPNMHCLRFDNLDL--DLDLDLELEVNKSSS--FEAGVVYKLI--NSCNGLL 128
             C     NP MHC+  D   L  D D DLE E  KS+S  F+    Y +I   SCNGL+
Sbjct: 85  KLC-----NPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWTYTIIMAGSCNGLM 144

Query: 129 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVNF 188
           LI K       ++    GIFNPMTNEF QV      +  Y YGFGF P TKQYKLFRV F
Sbjct: 145 LISKC-----SDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQYKLFRV-F 204

Query: 189 PLNVRPEEPNSV--SH--LDVLTFGRSEIID--PKQSQWRRLYSLPGGVENHGAHVNGVI 248
               R    +S   +H  ++VLTFGRS      P  +QWRRL++LP  +   G ++NG+I
Sbjct: 205 DKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEIVADGVYLNGII 264

Query: 249 YWLGEGK---EQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHM---- 308
           YWL + K   ++ +YV+Y LDVETE I+++ VL+V +  +  I QFNGT+YA FH+    
Sbjct: 265 YWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNGTIYATFHINWEK 324

Query: 309 -EEATQVWRMQEKNSWIRDFVIDD-----CNLTLVKAYENGEMLCMVKPTVFWLYNPSTG 368
                QVWRMQEK+SW+R FVI D      +L L+K +E+ E+L M+    F  YNPS+ 
Sbjct: 325 DSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMINMDFFCFYNPSSK 384

Query: 369 SKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAGDE 375
            K+++S   +KK +  IC +E LNFG L  IL G +
Sbjct: 385 KKRIISKNQKKKRY--ICQIESLNFGRLSQILEGTQ 407

[Close]

BLAST of Csa1G011590.1 vs. NCBI nr
Match: gi|700208649|gb|KGN63745.1| (hypothetical protein Csa_1G014420 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 4.9e-72
Identity = 175/400 (43.75%), Postives = 235/400 (58.75%), Query Frame = 1


Query: 5   DWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDV 64
           DW  GLP  I KTIFSKL++SNLP+CR VCK WN L+L +ASS   +FLTN F+L T D 
Sbjct: 37  DWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSDR 96

Query: 65  LHPFPCPDNHTNPNMHCLRFDNLDL--DLDLDLELEVNKSSSFEA----GVVYKLINSCN 124
           +  +       NP MHC+  DN     D+D DLE E  KS S +       +  L + CN
Sbjct: 97  MLNYEL----CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQFYGDWTFMILLAHPCN 156

Query: 125 GLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFR 184
           GL+ I K       ++    GIFNPMTNEFFQV   +  +  YHYGFG    +KQYKLFR
Sbjct: 157 GLMFISKC-----SDYTWCQGIFNPMTNEFFQVSEQDTFDDFYHYGFGLSAISKQYKLFR 216

Query: 185 VN--------FPLNVRPEEPNSVSHLDVLTFGRSEIID-PKQSQWRRLYSLPGGVENHGA 244
           V+        F L +     ++   ++VLTFGRS     P  +QWR L++L   +  HG 
Sbjct: 217 VSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWRHLHNLSCDL-IHGV 276

Query: 245 HVNGVIYWLGE---GKEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVF 304
           ++NG+IYWLG+    KE+ EYV+Y LDVETE+I++S +L+ V      +  FNGT+YA+F
Sbjct: 277 YLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQ-VQASDGKMHPFNGTIYALF 336

Query: 305 HM-----EEATQVWRMQEKNSWIRDFVIDDCN-----LTLVKAYENGEMLCMVKPTVFWL 364
           ++         QVW MQEK SWIR FVI D +     L L+K +E+GE+L ++    F  
Sbjct: 337 YINWEKDSRTIQVWSMQEKCSWIRQFVIRDISKEWGCLELIKIFEDGEILFLIDSDFFCF 396

Query: 365 YNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAG 373
           Y+P T  K+++S   +K  F  +C +E LNFGSL  IL G
Sbjct: 397 YHPLTEKKRIISKNQKKNRF--VCQIECLNFGSLPEILEG 423

[Close]

BLAST of Csa1G011590.1 vs. NCBI nr
Match: gi|659120418|ref|XP_008460183.1| (PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 2.9e-64
Identity = 171/390 (43.85%), Postives = 223/390 (57.18%), Query Frame = 1


Query: 9   GLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFTCDVLHPFP 68
           GLP  I + I   +++SN P  RVV K WN  ILD+A   S    N F+L TCD      
Sbjct: 9   GLPHHIVREILRWVVISNFPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTCD-----R 68

Query: 69  CPDNHT-NPNMHCLRFDNLDLDLDLDLELE-VNKSSSFEAGVVYKLI----NSCNGLLLI 128
            P+N   N  MHC+RFD     LD DLE E   KS S      +  I    NSCNGL+ I
Sbjct: 69  TPNNKDLNHKMHCIRFDTTT-HLDFDLESEWTTKSPSLSFDGDWPFISLVDNSCNGLVFI 128

Query: 129 YKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVNFPL 188
            K        F    GIFNPMTNEFFQ+P  E+    Y Y  GF P TKQYKLFRV    
Sbjct: 129 CKCAF-----FTRCDGIFNPMTNEFFQIPRGELDGDIYSYELGFSPTTKQYKLFRVTESF 188

Query: 189 NVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 248
            +  +  N+ S +DVLTF R    +   SQWRRL+SLP  + N GA++NGVIYW+G  ++
Sbjct: 189 FLDGDADNNSSIMDVLTFTRRSETNHNHSQWRRLHSLPLRIHN-GAYLNGVIYWIGTKED 248

Query: 249 -QNEYVVYTLDVETEKIQLSAVLEV---VNPMWMSIQQFNGTVYAVFHMEEAT-----QV 308
            +NEY++Y ++VETE I+LS +L++         S++QFN +VYA F +   T     QV
Sbjct: 249 KENEYIIYAVNVETELIELSFILDLGPCSTSSHASLKQFNSSVYATFFINPKTYNSSIQV 308

Query: 309 WRMQEKNSWIRDFVIDD-----CNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSL 368
           WRMQEK+ WIR+FVI D      +LTL+KA+E+GE+L        W        +K +  
Sbjct: 309 WRMQEKDLWIREFVIVDIPINWSSLTLIKAFEDGEIL--------W--------RKKIVT 368

Query: 369 RNEKKIFLGICHLE-LNFGSLLNILAGDES 376
           +N+KK    +C +E LNFG L NILAG+E+
Sbjct: 369 KNQKK-DRRVCQIEYLNFGLLQNILAGEET 369

[Close]

BLAST of Csa1G011590.1 vs. NCBI nr
Match: gi|700208650|gb|KGN63746.1| (hypothetical protein Csa_1G014430 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 1.0e-61
Identity = 163/399 (40.85%), Postives = 227/399 (56.89%), Query Frame = 1


Query: 5   DWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDV 64
           DW  GLP  I K IFSKL++SNLP+CR VCK WN L+L +ASS   +FLTN F+L T D 
Sbjct: 37  DWGKGLPPLIAKIIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSDQ 96

Query: 65  LHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEA----GVVYKLINSCNGL 124
           +  +       NP MH +  DN     D+DLE+E  KS SF+       +  + + CNGL
Sbjct: 97  MLNYEL----CNPKMHSINLDNTQCSDDVDLEMEFIKSGSFQFYGDWTFMILMAHPCNGL 156

Query: 125 LLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVN 184
           + I K       ++    GIFNPMTNEFFQV   +  +  Y+YGFG  P TKQYKLFR +
Sbjct: 157 VFISKC-----SDYTWCQGIFNPMTNEFFQVSEQDTFDDFYNYGFGLSPVTKQYKLFRTS 216

Query: 185 --FPLNVRPEEPNSVS------HLDVLTFGRSEIID-PKQSQWRRLYSLPGG--VENHGA 244
              P + R    ++ S       ++VLTFGRS     P  +QWR L++L     V + G 
Sbjct: 217 KAIPYSKRFRLVSTCSTDDTHYMMEVLTFGRSGTNHIPIHNQWRHLHNLSYDIVVGDGGV 276

Query: 245 HVNGVIY-WLGEG-KEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFH 304
           ++NG+I+ W  +  K + +Y +Y LD ETE+I++S +L+ V+     +  FNGT+YA F+
Sbjct: 277 YLNGIIFGWEKKNVKRKRKYDIYALDDETEQIEMSVILQ-VHARDGKMHLFNGTIYATFY 336

Query: 305 M-----EEATQVWRMQEKNSWIRDFVIDDCN-----LTLVKAYENGEMLCMVKPTVFWLY 364
                 +   QVW MQEK+SWIR FVI D +     L L+K +++G++        F+ Y
Sbjct: 337 TNWEKDDLTVQVWSMQEKHSWIRKFVISDISKQWSCLELIKMFKDGDI-----SDFFYFY 396

Query: 365 NPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAG 373
           NP T  K ++S   +KK    +C +E LNFGSL  I  G
Sbjct: 397 NPLTKKKSIISKDQKKKSC--VCQIECLNFGSLPKIFDG 418

The following BLAST results are available for this feature:

BLAST of Csa1G011590.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB135_ARATH	2.9e-08	23.99	F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1	[more]

BLAST of Csa1G011590.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSE0_CUCSA	9.8e-237	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1	[more]
A0A0A0LWG1_CUCSA	2.4e-73	45.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1	[more]
A0A0A0LPC6_CUCSA	3.4e-72	43.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1	[more]
A0A0A0LUP7_CUCSA	7.1e-62	40.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014430 PE=4 SV=1	[more]
A0A0A0LRY6_CUCSA	2.4e-57	42.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1	[more]

BLAST of Csa1G011590.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07870.1	1.6e-09	23.99	F-box and associated interaction domains-containing protein	[more]
AT1G33020.1	4.9e-06	22.05	F-box and associated interaction domains-containing protein	[more]

BLAST of Csa1G011590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664711\|ref\|XP_011660339.1\|	1.4e-236	100.00	PREDICTED: putative F-box protein At1g32420 [Cucumis sativus]	[more]
gi\|700210076\|gb\|KGN65172.1\|	3.4e-73	45.71	hypothetical protein Csa_1G257290 [Cucumis sativus]	[more]
gi\|700208649\|gb\|KGN63745.1\|	4.9e-72	43.75	hypothetical protein Csa_1G014420 [Cucumis sativus]	[more]
gi\|659120418\|ref\|XP_008460183.1\|	2.9e-64	43.85	PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]	[more]
gi\|700208650\|gb\|KGN63746.1\|	1.0e-61	40.85	hypothetical protein Csa_1G014430 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR011043	Gal_Oxase/kelch_b-propeller
IPR013187	F-box-assoc_dom_typ3
IPR017451	F-box-assoc_interact_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G011590	Csa1G011590	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G011590.1	Csa1G011590.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G011590.1.cds1	Csa1G011590.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 7..43 score: 4.
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 10..50 score: 2.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 4..54 score: 5.4
IPR011043	Galactose oxidase/kelch, beta-propeller	unknown	SSF50965	Galactose oxidase, central domain	coord: 137..159 score: 1.03E-5coord: 187..340 score: 1.0
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 227..325 score: 3.
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	TIGR01640	coord: 115..310 score: 2.1
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 5..43 score: 2.
None	No IPR available	PANTHER	PTHR31790	FAMILY NOT NAMED	coord: 5..381 score: 4.4