CsGy6G019920.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G019920.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Flavin-containing monooxygenase
Location	Chr6 : 20565796 .. 20567039 (+)
Sequence length	483

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCTTTCGGGATCCAGCCGAGATGTTGTCGGACGGTGGAAGAAGCTTGGTACGAGAAGGAGGAGGAAAGATGGAAGGTGGTGGTGGAAAATACAAGTAGTGGTGAGCAAGAGAGGTATGTTTGTAAGTTTCTTGTGGCAGCTACTGGGGAAAACTGTGAAGGGTTTTTGCCTAACATTCCTGGACTAGAGAGCTTTAACGGTGAGGTTTTGCATTCAAGTGGTTATGATAATGGGCAAAGGTTTAGAGGGAAAGATGTTTTGGTTGTTGGATGTGGGAATTCAGGTATGGAGATTGCTTATGATTTGTCTAACCATGCTGCAAATACTTCAATCGTGGTTCGGAGCCCGGTAATGAATAAATAATTTGATTAATTTTTTTTAATAAGAATTCATATTAAAAATTAAGTAAATGATTGTGGTATTCGATTTGAAATTAAACGCAGGTACACGTGTTAACTAAAGACATAGTTCGATTAGGGATGTTTTTATTGAAGTATTTTCCATGTAATGTTGTGGATTCAATTAGTATAAATCTTGCGAAGTTGAAGTATGGAGATTATTCTAAGTATGGGATTCAAAGGCCAAGAGCAGGAGGTCCTTTTCTTATCAAATCTAAAACTGGACGATCTCCTACCATTGATGTTGGCTGTATGAAAAGAATTCGAACAGGAGAGGTTAAGGTACATATATATAATAATTAAGGTTTAAAGACACAAGTTTTATTTCAATTTCAAATTATTCCATTGATATAAATGTATTAGTTATATATATTATATATTGTTTAGGTTTTTCCATCCATAACATGTATAAAGAGAGATCAAGTGAGATTTGCATATGGGATTGTGAATTGCTTTGATGCAATCATTTTTGCCACTGGCTACAAGAGCACTGTCATTAATTGGCTACAGGTATGTATGTATATTTAGAACATGAGTAAGAGCACTTTTTAACAAATTTATAATCACTTTCAAATATACATATATATGCGGATTTGTAAAACGAGGAAAAACTCAGCTGACATAAATCTTTTTAATCTTGGATGTATATAGGATGAGAAAAATCACTTCAATGAAAATGGAATGCCAAGAGAAAGGTTCCCAAATCATTGGAAAGGGGAAAATGGACTGTATTGTGCTGGATTTGGACAACAAGGTTTATTTGGAATTTCAAATGATGCAAAAAAGATTGCTACTGATATAAGCTTGGCTTTGGGTCTAAACAACACTACTGTGGAGTGA

mRNA sequence

ATGTCGTCTTTCGGGATCCAGCCGAGATGTTGTCGGACGGTGGAAGAAGCTTGGTACGAGAAGGAGGAGGAAAGATGGAAGGTGGTGGTGGAAAATACAAGTAGTGGTATGGAGATTGCTTATGATTTGTCTAACCATGCTGCAAATACTTCAATCGTGGTTCGGAGCCCGGTTTTTCCATCCATAACATGTATAAAGAGAGATCAAGTGAGATTTGCATATGGGATTGTGAATTGCTTTGATGCAATCATTTTTGCCACTGGCTACAAGAGCACTGTCATTAATTGGCTACAGGATGAGAAAAATCACTTCAATGAAAATGGAATGCCAAGAGAAAGGTTCCCAAATCATTGGAAAGGGGAAAATGGACTGTATTGTGCTGGATTTGGACAACAAGGTTTATTTGGAATTTCAAATGATGCAAAAAAGATTGCTACTGATATAAGCTTGGCTTTGGGTCTAAACAACACTACTGTGGAGTGA

Coding sequence (CDS)

ATGTCGTCTTTCGGGATCCAGCCGAGATGTTGTCGGACGGTGGAAGAAGCTTGGTACGAGAAGGAGGAGGAAAGATGGAAGGTGGTGGTGGAAAATACAAGTAGTGGTATGGAGATTGCTTATGATTTGTCTAACCATGCTGCAAATACTTCAATCGTGGTTCGGAGCCCGGTTTTTCCATCCATAACATGTATAAAGAGAGATCAAGTGAGATTTGCATATGGGATTGTGAATTGCTTTGATGCAATCATTTTTGCCACTGGCTACAAGAGCACTGTCATTAATTGGCTACAGGATGAGAAAAATCACTTCAATGAAAATGGAATGCCAAGAGAAAGGTTCCCAAATCATTGGAAAGGGGAAAATGGACTGTATTGTGCTGGATTTGGACAACAAGGTTTATTTGGAATTTCAAATGATGCAAAAAAGATTGCTACTGATATAAGCTTGGCTTTGGGTCTAAACAACACTACTGTGGAGTGA

Protein sequence

MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTSSGMEIAYDLSNHAANTSIVVRSPVFPSITCIKRDQVRFAYGIVNCFDAIIFATGYKSTVINWLQDEKNHFNENGMPRERFPNHWKGENGLYCAGFGQQGLFGISNDAKKIATDISLALGLNNTTVE

Homology

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BLAST of CsGy6G019920.1 vs. NCBI nr
Match: XP_004146808.1 (PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA11 [Cucumis sativus] >KGN47733.1 hypothetical protein Csa_6G396640 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 3.5e-70
Identity = 160/300 (53.33%), Postives = 160/300 (53.33%), Query Frame = 0


Query: 1   MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTS-------------------------- 60
           MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTS                          
Sbjct: 87  MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTSSGEQERYVCKFLVAATGENCEGFLPN 146

Query: 61  -----------------------------------SGMEIAYDLSNHAANTSIVVRSP-- 120
                                              SGMEIAYDLSNHAANTSIVVRSP  
Sbjct: 147 IPGLESFNGEVLHSSGYDNGQRFRGKDVLVVGCGNSGMEIAYDLSNHAANTSIVVRSPVH 206

Query: 121 ------------------------------------------------------------ 161
                                                                       
Sbjct: 207 VLTKDIVRLGMFLLKYFPCNVVDSISINLAKLKYGDYSKYGIQRPRAGGPFLIKSKTGRS 266

[Close]

BLAST of CsGy6G019920.1 vs. NCBI nr
Match: NP_001306243.1 (probable indole-3-pyruvate monooxygenase YUCCA11 [Cucumis melo] >AJO67754.1 YUCCA type protein 11 [Cucumis melo])

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 153/299 (51.17%), Postives = 157/299 (52.51%), Query Frame = 0


Query: 1   MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTS-------------------------- 60
           MSSFGIQPRCCRTVE+AWY+KEEERWKVVVENTS                          
Sbjct: 87  MSSFGIQPRCCRTVEQAWYDKEEERWKVVVENTSSGEQERYVCRFLVAATGENSEGFLPS 146

Query: 61  -----------------------------------SGMEIAYDLSNHAANTSIVVRSP-- 120
                                              SGMEIAYDLSNHAANTSIVVRSP  
Sbjct: 147 IPGLESFNGEVLHSSGYDNGQRFRGKDVLVVGCGNSGMEIAYDLSNHAANTSIVVRSPVH 206

Query: 121 ------------------------------------------------------------ 161
                                                                       
Sbjct: 207 VLTKDIVRLGMFLLNYFPCKVVDSISITLAKLKYGDYSKYGIQRPRGGPFLIKSKTGRSP 266

[Close]

BLAST of CsGy6G019920.1 vs. NCBI nr
Match: XP_022981515.1 (probable indole-3-pyruvate monooxygenase YUCCA11 [Cucurbita maxima])

HSP 1 Score: 184.5 bits (467), Expect = 2.8e-43
Identity = 115/289 (39.79%), Postives = 131/289 (45.33%), Query Frame = 0


Query: 1   MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENT--------------------------- 60
           MS FGI+PRCCR+VE AWY+K E +W VVV N                            
Sbjct: 87  MSCFGIEPRCCRSVERAWYDKVEGKWMVVVNNKGSGVEERYVCRYLVAASGENSEGFLPD 146

Query: 61  ----------------------------------SSGMEIAYDLSNHAANTSIVVRSP-- 120
                                             +SGMEIAYDLSN+AANTSIVVRSP  
Sbjct: 147 VPGLKSFHGEVLHSSGYENGERFRGKDVLVVGCGNSGMEIAYDLSNYAANTSIVVRSPVH 206

Query: 121 ------------------------------------------------------------ 150
                                                                       
Sbjct: 207 VLTKDIVRVGMFLLKYLPCKVVDPICINLAKMKYGNSSKYGIRRPKGGPFLIKAKTGRSP 266

[Close]

BLAST of CsGy6G019920.1 vs. NCBI nr
Match: XP_022926282.1 (probable indole-3-pyruvate monooxygenase YUCCA11 [Cucurbita moschata])

HSP 1 Score: 183.0 bits (463), Expect = 8.2e-43
Identity = 115/289 (39.79%), Postives = 130/289 (44.98%), Query Frame = 0


Query: 1   MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENT--------------------------- 60
           MS FGI+PRCCR+VE AWY+K E +W VVV N                            
Sbjct: 87  MSCFGIEPRCCRSVERAWYDKVEGKWMVVVNNKGSGVEERYVCRYLVAATGENSEGFLPD 146

Query: 61  ----------------------------------SSGMEIAYDLSNHAANTSIVVRSP-- 120
                                             +SGMEIAYDLSN+AANTSIVVRSP  
Sbjct: 147 VPGLKSFHGEVLHSSGYENGERFRGKDVLVVGCGNSGMEIAYDLSNYAANTSIVVRSPVH 206

Query: 121 ------------------------------------------------------------ 150
                                                                       
Sbjct: 207 VLTKDIVRVGMFLLRYLPCKVVDPICINLAKMKYGNSSKYGIRRPKGGPFLIKAKTGRSP 266

[Close]

BLAST of CsGy6G019920.1 vs. NCBI nr
Match: XP_023525780.1 (probable indole-3-pyruvate monooxygenase YUCCA11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 114/289 (39.45%), Postives = 130/289 (44.98%), Query Frame = 0


Query: 1   MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENT--------------------------- 60
           MS FGI+PRCCR+VE AWY+K E +W VVV N                            
Sbjct: 87  MSCFGIEPRCCRSVERAWYDKVEGKWMVVVNNKGSGVEERYVCRYLVAASGENSEGFLPD 146

Query: 61  ----------------------------------SSGMEIAYDLSNHAANTSIVVRSP-- 120
                                             +SGMEIAYDLSN+AANTSIVVRSP  
Sbjct: 147 VPGLKSFHGEVLHSSGYENGERFRGKDVLVVGCGNSGMEIAYDLSNYAANTSIVVRSPVH 206

Query: 121 ------------------------------------------------------------ 150
                                                                       
Sbjct: 207 VLTKDIVRVGMFLLKYLPCKVVDPICINLAKMKYGNSSKYGIRRPKGGPFLIKAKTGRSP 266

[Close]

BLAST of CsGy6G019920.1 vs. TAIR10
Match: AT1G21430.1 (Flavin-binding monooxygenase family protein)

HSP 1 Score: 107.5 bits (267), Expect = 8.0e-24
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 54  VRSPVFPSITCIKRDQ---VRFAYGIVNCFDAIIFATGYKSTVINWLQ-DEKNHFNENGM 113
           ++S     +T IKR +   V F  G     D+I+FATGYKS+V  WL+ D+ + FNENGM
Sbjct: 278 IKSGKIQVVTSIKRIEGKTVEFIDGNTKNVDSIVFATGYKSSVSKWLEVDDGDLFNENGM 337

Query: 114 PRERFPNHWKGENGLYCAGFGQQGLFGISNDAKKIATDI-SLALG 154
           P+  FP+HWKG+NGLY AGFG+QGL GIS DA+ IA DI SL  G
Sbjct: 338 PKREFPDHWKGKNGLYSAGFGKQGLAGISRDARNIARDIDSLVCG 382

[Close]

BLAST of CsGy6G019920.1 vs. TAIR10
Match: AT1G48910.1 (Flavin-containing monooxygenase family protein)

HSP 1 Score: 88.6 bits (218), Expect = 3.8e-18
Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 62  ITCIKRDQVRFAYGIVNCFDAIIFATGYKSTVINWLQDEKNHFNENGMPRERFPNHWKGE 121
           I  I    + F  G    FDAI+FATGYKS+V NWL+D +    ++G P+   P HWKGE
Sbjct: 287 IGSINGKTLTFENGHKQDFDAIVFATGYKSSVCNWLEDYEYVMKKDGFPKAPMPKHWKGE 346

Query: 122 NGLYCAGFGQQGLFGISNDAKKIATDI 149
             LYCAGF ++G+ G + DA  +A DI
Sbjct: 347 KNLYCAGFSRKGIAGGAEDAMSVADDI 373

HSP 2 Score: 37.4 bits (85), Expect = 1.0e-02
Identity = 16/30 (53.33%), Postives = 24/30 (80.00%), Query Frame = 0


Query: 28  VVVENTSSGMEIAYDLSNHAANTSIVVRSP 58
           +VV   +SGMEI++DL N  ANT+I++R+P
Sbjct: 174 LVVGGGNSGMEISFDLCNFGANTTILIRTP 203

[Close]

BLAST of CsGy6G019920.1 vs. TAIR10
Match: AT4G13260.1 (Flavin-binding monooxygenase family protein)

HSP 1 Score: 88.6 bits (218), Expect = 3.8e-18
Identity = 44/93 (47.31%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 58  VFPSITCIKRDQVRFAYGIVNCFDAIIFATGYKSTVINWLQDEKNHFNENGMPRERFPNH 117
           V+P +  +      F  G V+ FDAII ATGYKS V  WL+       ++G P + FPN 
Sbjct: 310 VYPELKRVMHYSAEFVDGRVDNFDAIILATGYKSNVPMWLKGVNMFSEKDGFPHKPFPNG 369

Query: 118 WKGENGLYCAGFGQQGLFGISNDAKKIATDISL 151
           WKGE+GLY  GF + GL G + DAKKIA DI +
Sbjct: 370 WKGESGLYAVGFTKLGLLGAAIDAKKIAEDIEV 402

[Close]

BLAST of CsGy6G019920.1 vs. TAIR10
Match: AT5G25620.2 (Flavin-binding monooxygenase family protein)

HSP 1 Score: 88.6 bits (218), Expect = 3.8e-18
Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 58  VFPSITCIKRDQVRFAYGIVNCFDAIIFATGYKSTVINWLQDEKNHFNENGMPRERFPNH 117
           V   I  +KR +V F  G    FDAII ATGYKS V +WL++ K    ++G P + FP  
Sbjct: 306 VCSGIRRLKRHEVEFDNGKTERFDAIILATGYKSNVPSWLKENKMFSKKDGFPIQEFPEG 365

Query: 118 WKGENGLYCAGFGQQGLFGISNDAKKIATDI 149
           W+GE GLY  GF ++G+ G S DAK+IA DI
Sbjct: 366 WRGECGLYAVGFTKRGISGASMDAKRIAEDI 396

[Close]

BLAST of CsGy6G019920.1 vs. TAIR10
Match: AT1G04180.1 (YUCCA 9)

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-17
Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 58  VFPSITCIKRDQVRFAYGIVNCFDAIIFATGYKSTVINWLQDEKNHFNENGMPRERFPNH 117
           + P+I    R  V    G     DA++ ATGY+S V +WLQ E   F++NG P+  FPN 
Sbjct: 306 IVPAIKQFSRHHVELVDGQKLDIDAVVLATGYRSNVPSWLQ-ESEFFSKNGFPKSPFPNA 365

Query: 118 WKGENGLYCAGFGQQGLFGISNDAKKIATDI 149
           WKG++GLY AGF ++GL G S DA  IA DI
Sbjct: 366 WKGKSGLYAAGFTRKGLAGASVDAVNIAQDI 395

[Close]

BLAST of CsGy6G019920.1 vs. Swiss-Prot
Match: sp|Q9LPL3|YUC11_ARATH (Probable indole-3-pyruvate monooxygenase YUCCA11 OS=Arabidopsis thaliana OX=3702 GN=YUC11 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-22
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 54  VRSPVFPSITCIKRDQ---VRFAYGIVNCFDAIIFATGYKSTVINWLQ-DEKNHFNENGM 113
           ++S     +T IKR +   V F  G     D+I+FATGYKS+V  WL+ D+ + FNENGM
Sbjct: 278 IKSGKIQVVTSIKRIEGKTVEFIDGNTKNVDSIVFATGYKSSVSKWLEVDDGDLFNENGM 337

Query: 114 PRERFPNHWKGENGLYCAGFGQQGLFGISNDAKKIATDI-SLALG 154
           P+  FP+HWKG+NGLY AGFG+QGL GIS DA+ IA DI SL  G
Sbjct: 338 PKREFPDHWKGKNGLYSAGFGKQGLAGISRDARNIARDIDSLVCG 382

[Close]

BLAST of CsGy6G019920.1 vs. Swiss-Prot
Match: sp|Q9FVQ0|YUC10_ARATH (Probable indole-3-pyruvate monooxygenase YUCCA10 OS=Arabidopsis thaliana OX=3702 GN=YUC10 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.9e-17
Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 62  ITCIKRDQVRFAYGIVNCFDAIIFATGYKSTVINWLQDEKNHFNENGMPRERFPNHWKGE 121
           I  I    + F  G    FDAI+FATGYKS+V NWL+D +    ++G P+   P HWKGE
Sbjct: 287 IGSINGKTLTFENGHKQDFDAIVFATGYKSSVCNWLEDYEYVMKKDGFPKAPMPKHWKGE 346

Query: 122 NGLYCAGFGQQGLFGISNDAKKIATDI 149
             LYCAGF ++G+ G + DA  +A DI
Sbjct: 347 KNLYCAGFSRKGIAGGAEDAMSVADDI 373

[Close]

BLAST of CsGy6G019920.1 vs. Swiss-Prot
Match: sp|Q9SVQ1|YUC2_ARATH (Indole-3-pyruvate monooxygenase YUCCA2 OS=Arabidopsis thaliana OX=3702 GN=YUC2 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.9e-17
Identity = 44/93 (47.31%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 58  VFPSITCIKRDQVRFAYGIVNCFDAIIFATGYKSTVINWLQDEKNHFNENGMPRERFPNH 117
           V+P +  +      F  G V+ FDAII ATGYKS V  WL+       ++G P + FPN 
Sbjct: 310 VYPELKRVMHYSAEFVDGRVDNFDAIILATGYKSNVPMWLKGVNMFSEKDGFPHKPFPNG 369

Query: 118 WKGENGLYCAGFGQQGLFGISNDAKKIATDISL 151
           WKGE+GLY  GF + GL G + DAKKIA DI +
Sbjct: 370 WKGESGLYAVGFTKLGLLGAAIDAKKIAEDIEV 402

[Close]

BLAST of CsGy6G019920.1 vs. Swiss-Prot
Match: sp|Q8VZ59|YUC6_ARATH (Indole-3-pyruvate monooxygenase YUCCA6 OS=Arabidopsis thaliana OX=3702 GN=YUC6 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.9e-17
Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 58  VFPSITCIKRDQVRFAYGIVNCFDAIIFATGYKSTVINWLQDEKNHFNENGMPRERFPNH 117
           V   I  +KR +V F  G    FDAII ATGYKS V +WL++ K    ++G P + FP  
Sbjct: 314 VCSGIRRLKRHEVEFDNGKTERFDAIILATGYKSNVPSWLKENKMFSKKDGFPIQEFPEG 373

Query: 118 WKGENGLYCAGFGQQGLFGISNDAKKIATDI 149
           W+GE GLY  GF ++G+ G S DAK+IA DI
Sbjct: 374 WRGECGLYAVGFTKRGISGASMDAKRIAEDI 404

[Close]

BLAST of CsGy6G019920.1 vs. Swiss-Prot
Match: sp|Q9LFM5|YUC4_ARATH (Probable indole-3-pyruvate monooxygenase YUCCA4 OS=Arabidopsis thaliana OX=3702 GN=YUC4 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.6e-16
Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 65  IKRDQVRFAYGIVNCFDAIIFATGYKSTVINWLQDEKNHFNENGMPRERFPNHWKGENGL 124
           I R+  +F  G    FD+II ATGYKS V +WL+ E + F + GMP+  FPN WKGE GL
Sbjct: 300 ITRNGAKFLNGKEIEFDSIILATGYKSNVPDWLK-ENSFFTKEGMPKTPFPNGWKGEKGL 359

Query: 125 YCAGFGQQGLFGISNDAKKIATDIS 150
           Y  GF ++GL G + DA KIA DI+
Sbjct: 360 YTVGFTRRGLSGTAYDAVKIAEDIT 383

[Close]

BLAST of CsGy6G019920.1 vs. TrEMBL
Match: tr|A0A0A0KDV0|A0A0A0KDV0_CUCSA (Flavin-containing monooxygenase OS=Cucumis sativus OX=3659 GN=Csa_6G396640 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.3e-70
Identity = 160/300 (53.33%), Postives = 160/300 (53.33%), Query Frame = 0


Query: 1   MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTS-------------------------- 60
           MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTS                          
Sbjct: 87  MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTSSGEQERYVCKFLVAATGENCEGFLPN 146

Query: 61  -----------------------------------SGMEIAYDLSNHAANTSIVVRSP-- 120
                                              SGMEIAYDLSNHAANTSIVVRSP  
Sbjct: 147 IPGLESFNGEVLHSSGYDNGQRFRGKDVLVVGCGNSGMEIAYDLSNHAANTSIVVRSPVH 206

Query: 121 ------------------------------------------------------------ 161
                                                                       
Sbjct: 207 VLTKDIVRLGMFLLKYFPCNVVDSISINLAKLKYGDYSKYGIQRPRAGGPFLIKSKTGRS 266

[Close]

BLAST of CsGy6G019920.1 vs. TrEMBL
Match: tr|A0A0F6PC55|A0A0F6PC55_CUCME (Flavin-containing monooxygenase OS=Cucumis melo OX=3656 GN=YUC11 PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 7.1e-67
Identity = 153/299 (51.17%), Postives = 157/299 (52.51%), Query Frame = 0


Query: 1   MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTS-------------------------- 60
           MSSFGIQPRCCRTVE+AWY+KEEERWKVVVENTS                          
Sbjct: 87  MSSFGIQPRCCRTVEQAWYDKEEERWKVVVENTSSGEQERYVCRFLVAATGENSEGFLPS 146

Query: 61  -----------------------------------SGMEIAYDLSNHAANTSIVVRSP-- 120
                                              SGMEIAYDLSNHAANTSIVVRSP  
Sbjct: 147 IPGLESFNGEVLHSSGYDNGQRFRGKDVLVVGCGNSGMEIAYDLSNHAANTSIVVRSPVH 206

Query: 121 ------------------------------------------------------------ 161
                                                                       
Sbjct: 207 VLTKDIVRLGMFLLNYFPCKVVDSISITLAKLKYGDYSKYGIQRPRGGPFLIKSKTGRSP 266

[Close]

BLAST of CsGy6G019920.1 vs. TrEMBL
Match: tr|A0A200R106|A0A200R106_9MAGN (Pyridine nucleotide-disulfide oxidoreductase OS=Macleaya cordata OX=56857 GN=BVC80_773g14 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 72/125 (57.60%), Postives = 91/125 (72.80%), Query Frame = 0


Query: 28  VVVENTSSGMEIAYDLSNHAANTSIVVRSPVFPSITCIKRDQVRFAYGIVNCFDAIIFAT 87
           +VV   +SGMEIAYDLSN  A TSIVVRSPV P ++ I+++ V F    ++ FD+IIFAT
Sbjct: 174 LVVGCGNSGMEIAYDLSNFGACTSIVVRSPVLPEVSRIEKNYVAFNNDEIHQFDSIIFAT 233

Query: 88  GYKSTVINWLQDEKNHFNENGMPRERFPNHWKGENGLYCAGFGQQGLFGISNDAKKIATD 147
           GY+ST  NWL+D  +   +NGMP+ RFPNHWKG NGLYCAG  ++GL G+S DA+ IA D
Sbjct: 234 GYRSTANNWLKDHDSLLGKNGMPKNRFPNHWKGANGLYCAGLSRRGLAGVSMDAEAIAND 293

Query: 148 ISLAL 153
           I   L
Sbjct: 294 IKFIL 298

[Close]

BLAST of CsGy6G019920.1 vs. TrEMBL
Match: tr|M5VV62|M5VV62_PRUPE (Flavin-containing monooxygenase OS=Prunus persica OX=3760 GN=PRUPE_8G014100 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.6e-32
Identity = 99/293 (33.79%), Postives = 123/293 (41.98%), Query Frame = 0


Query: 1   MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENTS-------------------------- 60
           +S F IQP   R VE A+Y+ + E+W V+V+NTS                          
Sbjct: 87  VSHFKIQPLYHRVVETAFYDADVEKWHVIVKNTSLDAQEIYLGKFLVVASGENSEGYIPQ 146

Query: 61  -----------------------------------SGMEIAYDLSNHAANTSIVVRSP-- 120
                                              SGMEIAYDLSN  ANTSIVVRSP  
Sbjct: 147 VQGLDSFGGEFMHSSKYENGKKYSGKNVLVVGCGNSGMEIAYDLSNSGANTSIVVRSPIH 206

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 207 VLTKEIVFLGMVMAKYIPINLVDNVMVILSKLRFGDLSKYGIRRPKSGPFFLKEKGQAPI 266

[Close]

BLAST of CsGy6G019920.1 vs. TrEMBL
Match: tr|A0A2P6REW6|A0A2P6REW6_ROSCH (Putative indole-3-pyruvate monooxygenase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0484941 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.6e-32
Identity = 97/294 (32.99%), Postives = 122/294 (41.50%), Query Frame = 0


Query: 1   MSSFGIQPRCCRTVEEAWYEKEEERWKVVVENT--------------------------- 60
           +S+F I P   R+VE A+Y +  E+W VVV NT                           
Sbjct: 87  VSTFNINPMYHRSVETAFYNENVEKWYVVVNNTRLGVKETYYGKFLVVASGENGEGYVPE 146

Query: 61  ----------------------------------SSGMEIAYDLSNHAANTSIVVRSP-- 120
                                             +SGMEIAYDLSN+ ANT IVVRSP  
Sbjct: 147 TKGLDTFNGEYIHSSKYENGMKYRGKDVLVVGSGNSGMEIAYDLSNYGANTFIVVRSPVH 206

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 207 VLTKEIVFFGMVLSKYLPVKVIDGIVLILGKLKFGNLSKYGIHKPTIGPFYLKEHEGQAP 266

The following BLAST results are available for this feature:

BLAST of CsGy6G019920.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146808.1	3.5e-70	53.33	PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA11 [Cucumis sativus] >K...	[more]
NP_001306243.1	1.1e-66	51.17	probable indole-3-pyruvate monooxygenase YUCCA11 [Cucumis melo] >AJO67754.1 YUCC...	[more]
XP_022981515.1	2.8e-43	39.79	probable indole-3-pyruvate monooxygenase YUCCA11 [Cucurbita maxima]	[more]
XP_022926282.1	8.2e-43	39.79	probable indole-3-pyruvate monooxygenase YUCCA11 [Cucurbita moschata]	[more]
XP_023525780.1	1.1e-42	39.45	probable indole-3-pyruvate monooxygenase YUCCA11 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G019920.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G21430.1	8.0e-24	54.29	Flavin-binding monooxygenase family protein	[more]
AT1G48910.1	3.8e-18	47.13	Flavin-containing monooxygenase family protein	[more]
AT4G13260.1	3.8e-18	47.31	Flavin-binding monooxygenase family protein	[more]
AT5G25620.2	3.8e-18	48.35	Flavin-binding monooxygenase family protein	[more]
AT1G04180.1	4.2e-17	47.25	YUCCA 9	[more]

BLAST of CsGy6G019920.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LPL3\|YUC11_ARATH	1.4e-22	54.29	Probable indole-3-pyruvate monooxygenase YUCCA11 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9FVQ0\|YUC10_ARATH	6.9e-17	47.13	Probable indole-3-pyruvate monooxygenase YUCCA10 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9SVQ1\|YUC2_ARATH	6.9e-17	47.31	Indole-3-pyruvate monooxygenase YUCCA2 OS=Arabidopsis thaliana OX=3702 GN=YUC2 P...	[more]
sp\|Q8VZ59\|YUC6_ARATH	6.9e-17	48.35	Indole-3-pyruvate monooxygenase YUCCA6 OS=Arabidopsis thaliana OX=3702 GN=YUC6 P...	[more]
sp\|Q9LFM5\|YUC4_ARATH	7.6e-16	51.76	Probable indole-3-pyruvate monooxygenase YUCCA4 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsGy6G019920.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDV0\|A0A0A0KDV0_CUCSA	2.3e-70	53.33	Flavin-containing monooxygenase OS=Cucumis sativus OX=3659 GN=Csa_6G396640 PE=3 ...	[more]
tr\|A0A0F6PC55\|A0A0F6PC55_CUCME	7.1e-67	51.17	Flavin-containing monooxygenase OS=Cucumis melo OX=3656 GN=YUC11 PE=2 SV=1	[more]
tr\|A0A200R106\|A0A200R106_9MAGN	1.5e-32	57.60	Pyridine nucleotide-disulfide oxidoreductase OS=Macleaya cordata OX=56857 GN=BVC...	[more]
tr\|M5VV62\|M5VV62_PRUPE	9.6e-32	33.79	Flavin-containing monooxygenase OS=Prunus persica OX=3760 GN=PRUPE_8G014100 PE=3...	[more]
tr\|A0A2P6REW6\|A0A2P6REW6_ROSCH	9.6e-32	32.99	Putative indole-3-pyruvate monooxygenase OS=Rosa chinensis OX=74649 GN=RchiOBHm_...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036188	FAD/NAD-bd_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0004499	N,N-dimethylaniline monooxygenase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy6G019920	CsGy6G019920	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy6G019920.1	CsGy6G019920.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G019920.1.exon.1	CsGy6G019920.1.exon.1	exon
CsGy6G019920.1.exon.2	CsGy6G019920.1.exon.2	exon
CsGy6G019920.1.exon.3	CsGy6G019920.1.exon.3	exon
CsGy6G019920.1.exon.4	CsGy6G019920.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G019920.1.CDS.1	CsGy6G019920.1.CDS.1	CDS
CsGy6G019920.1.CDS.2	CsGy6G019920.1.CDS.2	CDS
CsGy6G019920.1.CDS.3	CsGy6G019920.1.CDS.3	CDS
CsGy6G019920.1.CDS.4	CsGy6G019920.1.CDS.4	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	G3DSA:3.50.50.60		coord: 20..154 e-value: 1.3E-14 score: 55.9
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	coord: 15..148
None	No IPR available	PANTHER	PTHR43539:SF9	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA10-RELATED	coord: 29..58
None	No IPR available	PANTHER	PTHR43539	FAMILY NOT NAMED	coord: 29..58
None	No IPR available	PANTHER	PTHR43539:SF9	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA10-RELATED	coord: 58..152
None	No IPR available	PANTHER	PTHR43539	FAMILY NOT NAMED	coord: 58..152