CsGy6G015180.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G015180.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Putative WRKY transcription factor 33
Location	Chr6 : 13779193 .. 13780306 (-)
Sequence length	474

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATGTATAAGTTATTTAATGCATTGGTTTTTGATCTTGAATGTGTTGTATTAGTCTGAGGTGCAAACTCAGGCATGGGGTTTGGAATGGGAGAATGACGACCGGGGAGATGGATGGGGGATGAGGAACAGATCAGGATCTGAGGATGGGTTTAATTGGAGAAAATATGGGCAAAAAGTGGTAAAAGGAAGTGAAAATCCTAGAAGCTATTACAAATGTACATTCCCAAATTGCCCTGTTAGAAAACAAGTTGAAAGATCGTTGAATAACAATGGTCAAATTACTGAAATTGTTTACAAAAGTAAACATAACCATCCAAAACCAGACTTCACTAGAAGGTCATCTTCCTCTTTTTCTTCTTCTTCTTCTTCTTCCTCTTTTGAACCTGCGCAGCTAAAGAGTTCAATACCCTCTCACTCTGTAACCACGCCGGAGAACTCTTCAATCACCATTGGGGATGATCATTCCGACCAAGCTCATCCAAGAAGATGGTATTTTTCCAAACCCTCTTTTAACTCTCTCTCTTTTCATCCTACCTTATCTTTTCACTAAATTGTAAGTTTAAGTTGGTGTCTATTTCTTTAATAAATTTTTTATTTTGTGTTTAATAATTTCACTCTAGATTTCATATGTAAATATTATGACATTATTCAACTTTCAATATAAATATAAATCATATAAATCATTCATTTTGAGGTTGAGTAAAAACTATTTTGAAATATTAAACAAATCGATAATAACCATTTTGGTTCTTGTACTTTCAATTTTAACGAACATTTTCAAAAATAGCAAAATAAATTGAAATATTTATAAACTATAATAAATTTTTAAATTTTATCAATGAGTGTCTAAACTTCTATCATTGTCTATCTATATCAGTGACTATCAATGTGTAGTATCTGATAGGATCTATTTTTTTTTTGCTATATATATAGTACATATTTTGTCAAATTTACTATTATTTATTTATAATTTCAACCTTTAATCTTTTGTATTTTTTGAAATGGAAAATTTTCTTAGCCATTTTACTATAAATTTAAAAACATATATACATTAAAGATATTGTTTTGCATTATATTTATTATTATTTAGCAAAATTTTAGGAACTAA

mRNA sequence

ATGGATATGTATAAGTTATTTAATGCATTGTCTGAGGTGCAAACTCAGGCATGGGGTTTGGAATGGGAGAATGACGACCGGGGAGATGGATGGGGGATGAGGAACAGATCAGGATCTGAGGATGGGTTTAATTGGAGAAAATATGGGCAAAAAGTGGTAAAAGGAAGTGAAAATCCTAGAAGCTATTACAAATGTACATTCCCAAATTGCCCTGTTAGAAAACAAGTTGAAAGATCGTTGAATAACAATGGTCAAATTACTGAAATTGTTTACAAAAGTAAACATAACCATCCAAAACCAGACTTCACTAGAAGGTCATCTTCCTCTTTTTCTTCTTCTTCTTCTTCTTCCTCTTTTGAACCTGCGCAGCTAAAGAGTTCAATACCCTCTCACTCTGTAACCACGCCGGAGAACTCTTCAATCACCATTGGGGATGATCATTCCGACCAAGCTCATCCAAGAAGATGGAACTAA

Coding sequence (CDS)

ATGGATATGTATAAGTTATTTAATGCATTGTCTGAGGTGCAAACTCAGGCATGGGGTTTGGAATGGGAGAATGACGACCGGGGAGATGGATGGGGGATGAGGAACAGATCAGGATCTGAGGATGGGTTTAATTGGAGAAAATATGGGCAAAAAGTGGTAAAAGGAAGTGAAAATCCTAGAAGCTATTACAAATGTACATTCCCAAATTGCCCTGTTAGAAAACAAGTTGAAAGATCGTTGAATAACAATGGTCAAATTACTGAAATTGTTTACAAAAGTAAACATAACCATCCAAAACCAGACTTCACTAGAAGGTCATCTTCCTCTTTTTCTTCTTCTTCTTCTTCTTCCTCTTTTGAACCTGCGCAGCTAAAGAGTTCAATACCCTCTCACTCTGTAACCACGCCGGAGAACTCTTCAATCACCATTGGGGATGATCATTCCGACCAAGCTCATCCAAGAAGATGGAACTAA

Protein sequence

MDMYKLFNALSEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTRRSSSSFSSSSSSSSFEPAQLKSSIPSHSVTTPENSSITIGDDHSDQAHPRRWN

Homology

[Close]

BLAST of CsGy6G015180.1 vs. NCBI nr
Match: KGN47228.1 (hypothetical protein Csa_6G216960 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 11  SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC 70
           SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC
Sbjct: 124 SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC 183

Query: 71  PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTRXXXXXXXXXXXXXXXEPAQLKSSIPS 130
           PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTRXXXXXXXXXXXXXXXEPAQLKSSIPS
Sbjct: 184 PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTRXXXXXXXXXXXXXXXEPAQLKSSIPS 243

Query: 131 HSVTTPENSSITIGDDHSDQAHPRRW 157
           HSVTTPENSSITIGDDHSDQAHPRRW
Sbjct: 244 HSVTTPENSSITIGDDHSDQAHPRRW 269

[Close]

BLAST of CsGy6G015180.1 vs. NCBI nr
Match: NP_001274406.1 (probable WRKY transcription factor 33-like [Cucumis sativus] >ADU52522.1 WRKY protein [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 6.8e-50
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 11  SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC 70
           SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC
Sbjct: 97  SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC 156

Query: 71  PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTR 105
           PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTR
Sbjct: 157 PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTR 190

[Close]

BLAST of CsGy6G015180.1 vs. NCBI nr
Match: XP_008463823.1 (PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 26, partial [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 6   LFNALSEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKC 65
           +F + S VQT+AWGLE E+ DRG+ W MRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKC
Sbjct: 131 MFQSSSTVQTEAWGLESES-DRGE-WEMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKC 190

Query: 66  TFPNCPVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTR 105
           TFPNCPVRKQVERSLNNN QITEIVYKSKHNHPKPDFTR
Sbjct: 191 TFPNCPVRKQVERSLNNNAQITEIVYKSKHNHPKPDFTR 227

[Close]

BLAST of CsGy6G015180.1 vs. NCBI nr
Match: XP_023534752.1 (WRKY transcription factor WRKY24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32
Identity = 87/128 (67.97%), Postives = 99/128 (77.34%), Query Frame = 0


Query: 34  RNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYKS 93
           +NR+ S+DG+NWRKYGQK+VKGSENPRSYYKCT P CPVRKQVE+SL  NGQITEIVYKS
Sbjct: 168 KNRT-SDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL--NGQITEIVYKS 227

Query: 94  KHNHPKPDFTRXXXXXXXXXXXXXXXE-----PAQLKSSIPSHSVTTPENSSITIGDDHS 153
           KHNHPKP+F R  XXXXXXXXX           A+ K S+ S S+ TPENSS TIGDD S
Sbjct: 228 KHNHPKPEFPRRSXXXXXXXXXWLSQALPQTMAAEPKHSMASDSIPTPENSSTTIGDDDS 287

Query: 154 DQAHPRRW 157
           D+   +RW
Sbjct: 288 DELDAKRW 292

[Close]

BLAST of CsGy6G015180.1 vs. NCBI nr
Match: XP_023007167.1 (WRKY transcription factor WRKY24-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 147.1 bits (370), Expect = 4.9e-32
Identity = 93/133 (69.92%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 34  RNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYKS 93
           +NR+ S+DG+NWRKYGQK+VKGSENPRSYYKCT P CPVRKQVE+SL  NGQITEIVYKS
Sbjct: 168 KNRA-SDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL--NGQITEIVYKS 227

Query: 94  KHNHPKPDFTRXXXXXXXXXXXXXXXE----------PAQLKSSIPSHSVTTPENSSITI 153
           KHNHPKP+F RXXXXXXXXXXXXXXX            A+ K S+ S S+ TPENSS TI
Sbjct: 228 KHNHPKPEFPRXXXXXXXXXXXXXXXXXLSQALPQTMAAEPKHSMASDSIPTPENSSTTI 287

Query: 154 GDDHSDQAHPRRW 157
           GDD SD+   +RW
Sbjct: 288 GDDDSDEQDAKRW 297

[Close]

BLAST of CsGy6G015180.1 vs. TAIR10
Match: AT2G38470.1 (WRKY DNA-binding protein 33)

HSP 1 Score: 117.1 bits (292), Expect = 9.9e-27
Identity = 56/73 (76.71%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 32  GMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVY 91
           G   R G EDG+NWRKYGQK VKGSENPRSYYKCTFPNCP +K+VERSL   GQITEIVY
Sbjct: 177 GREQRKG-EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL--EGQITEIVY 236

Query: 92  KSKHNHPKPDFTR 105
           K  HNHPKP  TR
Sbjct: 237 KGSHNHPKPQSTR 246

[Close]

BLAST of CsGy6G015180.1 vs. TAIR10
Match: AT5G07100.1 (WRKY DNA-binding protein 26)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 47/72 (65.28%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 33  MRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYK 92
           M +   S+DG+NWRKYGQK VKGSENPRSY+KCT+PNC  +K+VE SL   GQ+ EIVYK
Sbjct: 110 MSSNKTSDDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSL-VKGQMIEIVYK 169

Query: 93  SKHNHPKPDFTR 105
             HNHPKP  T+
Sbjct: 170 GSHNHPKPQSTK 180

[Close]

BLAST of CsGy6G015180.1 vs. TAIR10
Match: AT1G13960.1 (WRKY DNA-binding protein 4)

HSP 1 Score: 100.9 bits (250), Expect = 7.3e-22
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 39  SEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYKSKHNHP 98
           ++DG+NWRKYGQK VKGSE PRSYYKCT P CPV+K+VERSL  +GQ+TEI+YK +HNH 
Sbjct: 228 ADDGYNWRKYGQKQVKGSEFPRSYYKCTNPGCPVKKKVERSL--DGQVTEIIYKGQHNHE 287

Query: 99  KPDFTR 105
            P  T+
Sbjct: 288 PPQNTK 291

[Close]

BLAST of CsGy6G015180.1 vs. TAIR10
Match: AT2G03340.1 (WRKY DNA-binding protein 3)

HSP 1 Score: 98.2 bits (243), Expect = 4.8e-21
Identity = 55/136 (40.44%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 39  SEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYKSKHNHP 98
           ++DG+NWRKYGQK VKGS+ PRSYYKCT P CPV+K+VERSL  +GQ+TEI+YK +HNH 
Sbjct: 249 ADDGYNWRKYGQKQVKGSDFPRSYYKCTHPACPVKKKVERSL--DGQVTEIIYKGQHNHE 308

Query: 99  KPDFTRXXXXXXXXXXXXXXXEPA-----QLKSSIPSHSVTTPE------------NSSI 158
            P                   + +     + K    +  VTT E            N+  
Sbjct: 309 LPQKRGNNNGSCKSSDIANQFQTSNSSLNKSKRDQETSQVTTTEQMSEASDSEEVGNAET 368

[Close]

BLAST of CsGy6G015180.1 vs. TAIR10
Match: AT5G56270.1 (WRKY DNA-binding protein 2)

HSP 1 Score: 97.8 bits (242), Expect = 6.2e-21
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 33  MRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYK 92
           M   + +EDG+NWRKYGQK+VKGSE PRSYYKCT PNC V+K+VERS    G ITEI+YK
Sbjct: 266 MAGGAPAEDGYNWRKYGQKLVKGSEYPRSYYKCTNPNCQVKKKVERS--REGHITEIIYK 325

Query: 93  SKHNHPKP 101
             HNH KP
Sbjct: 326 GAHNHLKP 331

[Close]

BLAST of CsGy6G015180.1 vs. Swiss-Prot
Match: sp|Q6B6R4|WRK24_ORYSI (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-28
Identity = 66/122 (54.10%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 36  RSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYKSKH 95
           R  S+DG+NWRKYGQK VKGSENPRSYYKCTFPNCP +K+VERSL  +GQITEIVYK  H
Sbjct: 216 RRSSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL--DGQITEIVYKGTH 275

Query: 96  NHPKPDFTRXXXXXXXXXXXXXXXEPAQLKSSIPSHSVTTPENSSITIGDDHSDQAHPRR 155
           NH KP  TR               + ++      S +  TPENSS + GDD      PR 
Sbjct: 276 NHAKPQNTRRNSGSSAAQVLQSGGDMSEHSFGGMSGTAATPENSSASFGDDEIGVGSPRA 335

Query: 156 WN 158
            N
Sbjct: 336 GN 335

[Close]

BLAST of CsGy6G015180.1 vs. Swiss-Prot
Match: sp|Q6IEQ7|WRK24_ORYSJ (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 66/122 (54.10%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 36  RSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYKSKH 95
           R  S+DG+NWRKYGQK VKGSENPRSYYKCTFPNCP +K+VERSL  +GQITEIVYK  H
Sbjct: 216 RRSSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL--DGQITEIVYKGTH 275

Query: 96  NHPKPDFTRXXXXXXXXXXXXXXXEPAQLKSSIPSHSVTTPENSSITIGDDHSDQAHPRR 155
           NH KP  TR               + ++      S +  TPENSS + GDD      PR 
Sbjct: 276 NHAKPQNTRRNSGSSAAQVLQSGGDMSEHSFGGMSGTAATPENSSASFGDDEIRVGSPRA 335

Query: 156 WN 158
            N
Sbjct: 336 GN 335

[Close]

BLAST of CsGy6G015180.1 vs. Swiss-Prot
Match: sp|Q8S8P5|WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana OX=3702 GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 56/73 (76.71%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 32  GMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVY 91
           G   R G EDG+NWRKYGQK VKGSENPRSYYKCTFPNCP +K+VERSL   GQITEIVY
Sbjct: 177 GREQRKG-EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL--EGQITEIVY 236

Query: 92  KSKHNHPKPDFTR 105
           K  HNHPKP  TR
Sbjct: 237 KGSHNHPKPQSTR 246

[Close]

BLAST of CsGy6G015180.1 vs. Swiss-Prot
Match: sp|Q9C5T3|WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana OX=3702 GN=WRKY26 PE=1 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-21
Identity = 47/72 (65.28%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 33  MRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYK 92
           M +   S+DG+NWRKYGQK VKGSENPRSY+KCT+PNC  +K+VE SL   GQ+ EIVYK
Sbjct: 110 MSSNKTSDDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSL-VKGQMIEIVYK 169

Query: 93  SKHNHPKPDFTR 105
             HNHPKP  T+
Sbjct: 170 GSHNHPKPQSTK 180

[Close]

BLAST of CsGy6G015180.1 vs. Swiss-Prot
Match: sp|Q6VWJ6|WRK46_HORVU (WRKY transcription factor SUSIBA2 OS=Hordeum vulgare OX=4513 GN=WRKY46 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.7e-21
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 39  SEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYKSKHNHP 98
           ++DG+NWRKYGQK VKGSENPRSYYKCT PNC V+K +ER++  +G ITE+VYK +HNHP
Sbjct: 188 ADDGYNWRKYGQKHVKGSENPRSYYKCTHPNCEVKKLLERAV--DGLITEVVYKGRHNHP 247

Query: 99  KPDFTR 105
           KP   R
Sbjct: 248 KPQPNR 251

[Close]

BLAST of CsGy6G015180.1 vs. TrEMBL
Match: tr|A0A0A0KCF6|A0A0A0KCF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G216960 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.9e-71
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 11  SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC 70
           SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC
Sbjct: 124 SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC 183

Query: 71  PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTRXXXXXXXXXXXXXXXEPAQLKSSIPS 130
           PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTRXXXXXXXXXXXXXXXEPAQLKSSIPS
Sbjct: 184 PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTRXXXXXXXXXXXXXXXEPAQLKSSIPS 243

Query: 131 HSVTTPENSSITIGDDHSDQAHPRRW 157
           HSVTTPENSSITIGDDHSDQAHPRRW
Sbjct: 244 HSVTTPENSSITIGDDHSDQAHPRRW 269

[Close]

BLAST of CsGy6G015180.1 vs. TrEMBL
Match: tr|E7CEX9|E7CEX9_CUCSA (WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY38 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.5e-50
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 11  SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC 70
           SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC
Sbjct: 97  SEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNC 156

Query: 71  PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTR 105
           PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTR
Sbjct: 157 PVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTR 190

[Close]

BLAST of CsGy6G015180.1 vs. TrEMBL
Match: tr|A0A1S3CK37|A0A1S3CK37_CUCME (LOW QUALITY PROTEIN: probable WRKY transcription factor 26 OS=Cucumis melo OX=3656 GN=LOC103501873 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-41
Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 6   LFNALSEVQTQAWGLEWENDDRGDGWGMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKC 65
           +F + S VQT+AWGLE E+ DRG+ W MRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKC
Sbjct: 131 MFQSSSTVQTEAWGLESES-DRGE-WEMRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKC 190

Query: 66  TFPNCPVRKQVERSLNNNGQITEIVYKSKHNHPKPDFTR 105
           TFPNCPVRKQVERSLNNN QITEIVYKSKHNHPKPDFTR
Sbjct: 191 TFPNCPVRKQVERSLNNNAQITEIVYKSKHNHPKPDFTR 227

[Close]

BLAST of CsGy6G015180.1 vs. TrEMBL
Match: tr|A0A2G5EQU3|A0A2G5EQU3_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00500209v1 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-28
Identity = 70/128 (54.69%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 33  MRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYK 92
           +R +  S+DG+NWRKYGQK VKGSENPRSYYKCTFPNCP +K+VERSL  +GQITEIVYK
Sbjct: 243 LREQRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL--DGQITEIVYK 302

Query: 93  SKHNHPKPDFTRXXXXXXXXXXXXXXXEPAQLKSSIPSH------SVTTPENSSITIGDD 152
             HNH KP  TR                 +++     SH      SVTTPENSSI+IGD+
Sbjct: 303 GSHNHAKPQSTRRSSASSQSIQAAVVPSSSEVSDHFGSHGNTQMDSVTTPENSSISIGDE 362

Query: 153 HSDQAHPR 155
             D++  R
Sbjct: 363 DLDRSSQR 368

[Close]

BLAST of CsGy6G015180.1 vs. TrEMBL
Match: tr|A0A2R6P6G2|A0A2R6P6G2_ACTCH (WRKY transcription factor OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31852 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.3e-28
Identity = 71/123 (57.72%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 33  MRNRSGSEDGFNWRKYGQKVVKGSENPRSYYKCTFPNCPVRKQVERSLNNNGQITEIVYK 92
           +R +  SEDG+NWRKYGQK VKGSENPRSYYKCTFPNCP +K+VERS+  +GQITEIVYK
Sbjct: 231 IREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSI--DGQITEIVYK 290

Query: 93  SKHNHPKPDFTRXXXXXXXXXXXXXXXEPAQLKS-----SIPSHSVTTPENSSITIGDDH 151
             HNHPKP  TR                    KS     + P   V TPENSSI+IGDD 
Sbjct: 291 GNHNHPKPQSTRRSSSSASSQAIQAHTNEIPDKSYASHGNGPMDLVATPENSSISIGDDE 350

The following BLAST results are available for this feature:

BLAST of CsGy6G015180.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47228.1	1.2e-70	100.00	hypothetical protein Csa_6G216960 [Cucumis sativus]	[more]
NP_001274406.1	6.8e-50	100.00	probable WRKY transcription factor 33-like [Cucumis sativus] >ADU52522.1 WRKY pr...	[more]
XP_008463823.1	1.5e-41	86.87	PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 26, partial [...	[more]
XP_023534752.1	1.3e-32	67.97	WRKY transcription factor WRKY24-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007167.1	4.9e-32	69.92	WRKY transcription factor WRKY24-like isoform X1 [Cucurbita maxima]	[more]

BLAST of CsGy6G015180.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38470.1	9.9e-27	76.71	WRKY DNA-binding protein 33	[more]
AT5G07100.1	1.9e-22	65.28	WRKY DNA-binding protein 26	[more]
AT1G13960.1	7.3e-22	68.18	WRKY DNA-binding protein 4	[more]
AT2G03340.1	4.8e-21	40.44	WRKY DNA-binding protein 3	[more]
AT5G56270.1	6.2e-21	67.65	WRKY DNA-binding protein 2	[more]

BLAST of CsGy6G015180.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6B6R4\|WRK24_ORYSI	1.7e-28	54.10	WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY2...	[more]
sp\|Q6IEQ7\|WRK24_ORYSJ	2.2e-28	54.10	WRKY transcription factor WRKY24 OS=Oryza sativa subsp. japonica OX=39947 GN=WRK...	[more]
sp\|Q8S8P5\|WRK33_ARATH	1.8e-25	76.71	Probable WRKY transcription factor 33 OS=Arabidopsis thaliana OX=3702 GN=WRKY33 ...	[more]
sp\|Q9C5T3\|WRK26_ARATH	3.5e-21	65.28	Probable WRKY transcription factor 26 OS=Arabidopsis thaliana OX=3702 GN=WRKY26 ...	[more]
sp\|Q6VWJ6\|WRK46_HORVU	7.7e-21	68.18	WRKY transcription factor SUSIBA2 OS=Hordeum vulgare OX=4513 GN=WRKY46 PE=1 SV=1	[more]

BLAST of CsGy6G015180.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCF6\|A0A0A0KCF6_CUCSA	7.9e-71	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G216960 PE=4 SV=1	[more]
tr\|E7CEX9\|E7CEX9_CUCSA	4.5e-50	100.00	WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY38 PE=2 SV=1	[more]
tr\|A0A1S3CK37\|A0A1S3CK37_CUCME	1.0e-41	86.87	LOW QUALITY PROTEIN: probable WRKY transcription factor 26 OS=Cucumis melo OX=36...	[more]
tr\|A0A2G5EQU3\|A0A2G5EQU3_AQUCA	1.7e-28	54.69	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00500209v1 PE=4...	[more]
tr\|A0A2R6P6G2\|A0A2R6P6G2_ACTCH	6.3e-28	57.72	WRKY transcription factor OS=Actinidia chinensis var. chinensis OX=1590841 GN=CE...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036576	WRKY_dom_sf
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy6G015180	CsGy6G015180	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy6G015180.1	CsGy6G015180.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G015180.1.CDS.3	CsGy6G015180.1.CDS.3	CDS
CsGy6G015180.1.CDS.2	CsGy6G015180.1.CDS.2	CDS
CsGy6G015180.1.CDS.1	CsGy6G015180.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G015180.1.exon.3	CsGy6G015180.1.exon.3	exon
CsGy6G015180.1.exon.2	CsGy6G015180.1.exon.2	exon
CsGy6G015180.1.exon.1	CsGy6G015180.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 39..99 e-value: 1.8E-37 score: 140.5
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 40..98 e-value: 1.2E-26 score: 92.7
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 40..100 score: 24.501
IPR036576	WRKY domain superfamily	GENE3D	G3DSA:2.20.25.80		coord: 31..101 e-value: 6.0E-29 score: 101.5
IPR036576	WRKY domain superfamily	SUPERFAMILY	SSF118290	WRKY DNA-binding domain	coord: 37..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..146
None	No IPR available	PANTHER	PTHR31221:SF1	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	coord: 36..140
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 36..140