CsGy6G013670.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGACATCAAGAACAAAAGTGTTGAAGAACAAGAACAAGATATCAACCTTCAAATCGCCAACCTTCAAATCGGCACATCGAATTCTCAAAAACAGATGGAGATATTTTCAAATAATGAAGAATTGGAGAGATCACCGAATGGATCGAGAAACACAGAATCAAACGAAGCAGGATCATCGAAAAAGAATGAACAAGAATCTGATTATGATTCTGGTTCTGATTCGGATATGGATGATCCTCTGTTAGTAATAGAGAAAATTCTATTGAAATACAACGATTTCATTGAGTACGTATACCAAATCTTGAAAAAGTATGAAGAGAAACAAGATTGGAGTGAGATTGTTGAGATAGTACAAAAGCTGGTTAAAACTTTGAATCAACATATGATAGTAGTGGATTTTTATATGAAATGTCTTGAAGAGTTGGGATGTTTTGAGAAGCAATATCAATTCAGAGAAACTCATACTCTTAATATATTAGATGTGATTCGACATATAAATACAAGAATTGCAAGTTCGAGTAGTTTTAGACTTGTTTCGGATATCAAGAACAGAGGAAAAGTGTTGCCCATATGTTTAGGGGAGTTTGAGAGATCGAGGCGAGAATTGAGTCTAATGATTGATTCAATGCAATTACTGAAGAAACTGGGTTTGGAATTAGATCGTGATGATGAAACAAGATGA ATGGCTGACATCAAGAACAAAAGTGTTGAAGAACAAGAACAAGATATCAACCTTCAAATCGCCAACCTTCAAATCGGCACATCGAATTCTCAAAAACAGATGGAGATATTTTCAAATAATGAAGAATTGGAGAGATCACCGAATGGATCGAGAAACACAGAATCAAACGAAGCAGGATCATCGAAAAAGAATGAACAAGAATCTGATTATGATTCTGGTTCTGATTCGGATATGGATGATCCTCTGTTAGTAATAGAGAAAATTCTATTGAAATACAACGATTTCATTGAGTACGTATACCAAATCTTGAAAAAGTATGAAGAGAAACAAGATTGGAGTGAGATTGTTGAGATAGTACAAAAGCTGGTTAAAACTTTGAATCAACATATGATAGTAGTGGATTTTTATATGAAATGTCTTGAAGAGTTGGGATGTTTTGAGAAGCAATATCAATTCAGAGAAACTCATACTCTTAATATATTAGATGTGATTCGACATATAAATACAAGAATTGCAAGTTCGAGTAGTTTTAGACTTGTTTCGGATATCAAGAACAGAGGAAAAGTGTTGCCCATATGTTTAGGGGAGTTTGAGAGATCGAGGCGAGAATTGAGTCTAATGATTGATTCAATGCAATTACTGAAGAAACTGGGTTTGGAATTAGATCGTGATGATGAAACAAGATGA ATGGCTGACATCAAGAACAAAAGTGTTGAAGAACAAGAACAAGATATCAACCTTCAAATCGCCAACCTTCAAATCGGCACATCGAATTCTCAAAAACAGATGGAGATATTTTCAAATAATGAAGAATTGGAGAGATCACCGAATGGATCGAGAAACACAGAATCAAACGAAGCAGGATCATCGAAAAAGAATGAACAAGAATCTGATTATGATTCTGGTTCTGATTCGGATATGGATGATCCTCTGTTAGTAATAGAGAAAATTCTATTGAAATACAACGATTTCATTGAGTACGTATACCAAATCTTGAAAAAGTATGAAGAGAAACAAGATTGGAGTGAGATTGTTGAGATAGTACAAAAGCTGGTTAAAACTTTGAATCAACATATGATAGTAGTGGATTTTTATATGAAATGTCTTGAAGAGTTGGGATGTTTTGAGAAGCAATATCAATTCAGAGAAACTCATACTCTTAATATATTAGATGTGATTCGACATATAAATACAAGAATTGCAAGTTCGAGTAGTTTTAGACTTGTTTCGGATATCAAGAACAGAGGAAAAGTGTTGCCCATATGTTTAGGGGAGTTTGAGAGATCGAGGCGAGAATTGAGTCTAATGATTGATTCAATGCAATTACTGAAGAAACTGGGTTTGGAATTAGATCGTGATGATGAAACAAGATGA MADIKNKSVEEQEQDINLQIANLQIGTSNSQKQMEIFSNNEELERSPNGSRNTESNEAGSSKKNEQESDYDSGSDSDMDDPLLVIEKILLKYNDFIEYVYQILKKYEEKQDWSEIVEIVQKLVKTLNQHMIVVDFYMKCLEELGCFEKQYQFRETHTLNILDVIRHINTRIASSSSFRLVSDIKNRGKVLPICLGEFERSRRELSLMIDSMQLLKKLGLELDRDDETR
BLAST of CsGy6G013670.1 vs. NCBI nr
Match: KGN47072.1 (hypothetical protein Csa_6G185220 [Cucumis sativus]) HSP 1 Score: 391.0 bits (1003), Expect = 2.8e-105 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsGy6G013670.1 vs. NCBI nr
Match: KGN47073.1 (hypothetical protein Csa_6G185230 [Cucumis sativus]) HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49 Identity = 117/192 (60.94%), Postives = 139/192 (72.40%), Query Frame = 0
BLAST of CsGy6G013670.1 vs. NCBI nr
Match: KGN47071.1 (hypothetical protein Csa_6G185210 [Cucumis sativus]) HSP 1 Score: 178.3 bits (451), Expect = 2.9e-41 Identity = 105/193 (54.40%), Postives = 127/193 (65.80%), Query Frame = 0
BLAST of CsGy6G013670.1 vs. NCBI nr
Match: KGN47070.1 (hypothetical protein Csa_6G184210 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 3.3e-29 Identity = 86/191 (45.03%), Postives = 116/191 (60.73%), Query Frame = 0
BLAST of CsGy6G013670.1 vs. NCBI nr
Match: KGN47069.1 (hypothetical protein Csa_6G184200 [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 6.3e-28 Identity = 93/206 (45.15%), Postives = 126/206 (61.17%), Query Frame = 0
BLAST of CsGy6G013670.1 vs. TrEMBL
Match: tr|A0A0A0KF99|A0A0A0KF99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185220 PE=4 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.9e-105 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsGy6G013670.1 vs. TrEMBL
Match: tr|A0A0A0KC44|A0A0A0KC44_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185230 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49 Identity = 117/192 (60.94%), Postives = 139/192 (72.40%), Query Frame = 0
BLAST of CsGy6G013670.1 vs. TrEMBL
Match: tr|A0A0A0KH35|A0A0A0KH35_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185210 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41 Identity = 105/193 (54.40%), Postives = 127/193 (65.80%), Query Frame = 0
BLAST of CsGy6G013670.1 vs. TrEMBL
Match: tr|A0A0A0KBL9|A0A0A0KBL9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G184210 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.2e-29 Identity = 86/191 (45.03%), Postives = 116/191 (60.73%), Query Frame = 0
BLAST of CsGy6G013670.1 vs. TrEMBL
Match: tr|A0A0A0KE23|A0A0A0KE23_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G184200 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 4.1e-28 Identity = 93/206 (45.15%), Postives = 126/206 (61.17%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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