CsGy6G013250.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G013250.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	receptor like protein 29
Location	Chr6 : 11665166 .. 11666515 (-)
Sequence length	792

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTGTTTTTTCTTCCTTCTACTTTCTCTCTTTTCCCCTATTCTTGCTAACAATCTTGCACCCATTTCCATGCTTCCTTTTGAACTTGAAACTCTCTTCAAAATCATGGATTCCATGTCTACTGATCAAAATTGGAGGCTTTCTTATCCTAACCCTTGTCAACCTGGCTCTTCTTGGCCTGGATTAGAGTGCAAATCATCTTTTATTAACAATACTAATCTCTTTCATGTCTCAAGGCTTGACTTTGGTACTTACCCATATCCTTCTTGTAAACCTACTGCTATTTTCCCTTCATTCATCTTTGATCTCCCTCACCTTCATTCTCTCTTCTTCTTCAATTGCTTCACTCAAACCAATACCACTCTCTCTATTTCCCCCTTCTCTAACTCTTCTTTACAACAACTTAGCCTTCGGTCCAACCCGGCGCTTACCGGCCCGATCCCGTCTCGACTTTCGTCTCTCAAGTCCTTGAAGATACTCACATTGTCTCAAAACCGACTTTTCGGTGCAATTCCGAACGAGGTTTTTGAGTTGGTGTCATTAGTGCATCTTGACTTGAGTTACAATATGCTGACAGGTAGTATACCAATTGAGTTGGGGAATCTTAGAAGCCTTGAAGGTTTGGATTTGAGCTATAATTCACTCAATGGACCAATCCCAACCACAATTGGTCAACTGGGTTTGCTTCAAAAACTTGACTTGAGCTCAAATGCACTCACTTTCAACATACCTGATTCCATTGTGAAGCTTAATTCTTTGGTGTTTTTGGCTTTGAGTAGCAATCAATTTCGTGGGTATTTCCCAGAAGGACTTGAAAAGTTGCAAAACTTGCAATATTTCATTATGGATGATAATCCAATGCAAACTCCTCTGCCTTTAGCATTTGGTGAATTAGTGAAACTACAAGAACTTAGGCTTGCAAGTTGTGGCTATTCTGGTATTATTCCTCCAAGCTTTTCACTTTTAAAAAACTTGACCACTTTATCACTGCAAAACAATCATTTAAGTGGTCAAATCCCAGTTGGATTCAGTGGTCTTTCTCATATTTATCACTTGAATCTTAGTAGAAACTCACTCAGTGGTGCTGTCCCTTTCAACTCAAGTTTCTTGAAAAGATTGGGAAAAAACTTGGATCTCACTGGAAATCCAAGCCTTTGTTTTAGCCCTTCTGAAGCCATCACTGCCCAAAAACTTGGAGTCACTGTCTGTGGAAGCAAGGAAAATGGGTCATTCATTCAACCATCGAATAAATCTCTACCTAGATCCAGCTTTTGTTGTAATCCATTTGCTTTTGCTATTTGTTTGTTGTTGCATCATATATTCTTCTCACTATGGTCTCATTCTTAA

mRNA sequence

ATGTACTGTTTTTTCTTCCTTCTACTTTCTCTCTTTTCCCCTATTCTTGCTAACAATCTTGCACCCATTTCCATGCTTCCTTTTGAACTTGAAACTCTCTTCAAAATCATGGATTCCATGTCTACTGATCAAAATTGGAGGCTTTCTTATCCTAACCCTTGTCAACCTGGCTCTTCTTGGCCTGGATTAGAGTGCAAATCATCTTTTATTAACAATACTAATCTCTTTCATGTCTCAAGGCTTGACTTTGAAGGACTTGAAAAGTTGCAAAACTTGCAATATTTCATTATGGATGATAATCCAATGCAAACTCCTCTGCCTTTAGCATTTGGTGAATTAGTGAAACTACAAGAACTTAGGCTTGCAAGTTGTGGCTATTCTGGTATTATTCCTCCAAGCTTTTCACTTTTAAAAAACTTGACCACTTTATCACTGCAAAACAATCATTTAAGTGGTCAAATCCCAGTTGGATTCAGTGGTCTTTCTCATATTTATCACTTGAATCTTAGTAGAAACTCACTCAGTGGTGCTGTCCCTTTCAACTCAAGTTTCTTGAAAAGATTGGGAAAAAACTTGGATCTCACTGGAAATCCAAGCCTTTGTTTTAGCCCTTCTGAAGCCATCACTGCCCAAAAACTTGGAGTCACTGTCTGTGGAAGCAAGGAAAATGGGTCATTCATTCAACCATCGAATAAATCTCTACCTAGATCCAGCTTTTGTTGTAATCCATTTGCTTTTGCTATTTGTTTGTTGTTGCATCATATATTCTTCTCACTATGGTCTCATTCTTAA

Coding sequence (CDS)

ATGTACTGTTTTTTCTTCCTTCTACTTTCTCTCTTTTCCCCTATTCTTGCTAACAATCTTGCACCCATTTCCATGCTTCCTTTTGAACTTGAAACTCTCTTCAAAATCATGGATTCCATGTCTACTGATCAAAATTGGAGGCTTTCTTATCCTAACCCTTGTCAACCTGGCTCTTCTTGGCCTGGATTAGAGTGCAAATCATCTTTTATTAACAATACTAATCTCTTTCATGTCTCAAGGCTTGACTTTGAAGGACTTGAAAAGTTGCAAAACTTGCAATATTTCATTATGGATGATAATCCAATGCAAACTCCTCTGCCTTTAGCATTTGGTGAATTAGTGAAACTACAAGAACTTAGGCTTGCAAGTTGTGGCTATTCTGGTATTATTCCTCCAAGCTTTTCACTTTTAAAAAACTTGACCACTTTATCACTGCAAAACAATCATTTAAGTGGTCAAATCCCAGTTGGATTCAGTGGTCTTTCTCATATTTATCACTTGAATCTTAGTAGAAACTCACTCAGTGGTGCTGTCCCTTTCAACTCAAGTTTCTTGAAAAGATTGGGAAAAAACTTGGATCTCACTGGAAATCCAAGCCTTTGTTTTAGCCCTTCTGAAGCCATCACTGCCCAAAAACTTGGAGTCACTGTCTGTGGAAGCAAGGAAAATGGGTCATTCATTCAACCATCGAATAAATCTCTACCTAGATCCAGCTTTTGTTGTAATCCATTTGCTTTTGCTATTTGTTTGTTGTTGCATCATATATTCTTCTCACTATGGTCTCATTCTTAA

Protein sequence

MYCFFFLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLFHVSRLDFEGLEKLQNLQYFIMDDNPMQTPLPLAFGELVKLQELRLASCGYSGIIPPSFSLLKNLTTLSLQNNHLSGQIPVGFSGLSHIYHLNLSRNSLSGAVPFNSSFLKRLGKNLDLTGNPSLCFSPSEAITAQKLGVTVCGSKENGSFIQPSNKSLPRSSFCCNPFAFAICLLLHHIFFSLWSHS

Homology

[Close]

BLAST of CsGy6G013250.1 vs. NCBI nr
Match: XP_004143187.1 (PREDICTED: protein TOO MANY MOUTHS [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 7.1e-60
Identity = 230/449 (51.22%), Postives = 234/449 (52.12%), Query Frame = 0


Query: 1   MYCFFFLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSW 60
           MYCFFFLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSW
Sbjct: 1   MYCFFFLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSW 60

Query: 61  PGLECKSSFINNTNLFHVSRLDF---------------------EGLEKL---------- 120
           PGLECKSSFINNTNLFHVSRLDF                       L  L          
Sbjct: 61  PGLECKSSFINNTNLFHVSRLDFGTYPYPSCKPTAIFPSFIFDLPHLHSLFFFNCFTQTN 120

Query: 121 ----------QNLQYFIMDDNPMQT-PLPLAFGELVKLQELRL----------------- 180
                      +LQ   +  NP  T P+P     L  L+ L L                 
Sbjct: 121 TTLSISPFSNSSLQQLSLRSNPALTGPIPSRLSSLKSLKILTLXXXXXXXXXXXXXXXXX 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ------------------------------------------------------------ 264
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

[Close]

BLAST of CsGy6G013250.1 vs. NCBI nr
Match: XP_008456382.1 (PREDICTED: protein TOO MANY MOUTHS [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 2.3e-50
Identity = 215/445 (48.31%), Postives = 222/445 (49.89%), Query Frame = 0


Query: 1   MYCFFFLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSW 60
           MYCF FLLLSLFSPILANNLAPISMLPFELETLFKIMDSMS+DQNWRLS+PNPCQPGSSW
Sbjct: 1   MYCFSFLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSSDQNWRLSHPNPCQPGSSW 60

Query: 61  PGLECKSSFINNTNLFHVSRLDF---------------------EGLEKL---------- 120
           PGLECKSS INNTN FHVSRLDF                       L  L          
Sbjct: 61  PGLECKSSLINNTNFFHVSRLDFGTYPYPSCKPTAIFPSFIFDLPHLHSLFFFNCFTHTN 120

Query: 121 ----------QNLQYFIMDDNPMQT-PLPLAFGELVKLQELRL----------------- 180
                      +LQ   +  NP  T P+P     L  L+ L L                 
Sbjct: 121 TTLSISPFSNSSLQQLSLRSNPALTGPIPSRLSSLKSLKILTLXXXXXXXXXXXXXXXXX 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ------------------------------------------------------------ 260
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

[Close]

BLAST of CsGy6G013250.1 vs. NCBI nr
Match: KGN47021.1 (hypothetical protein Csa_6G169860 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 9.1e-47
Identity = 206/425 (48.47%), Postives = 210/425 (49.41%), Query Frame = 0


Query: 25  MLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLFHVSRLDF- 84
           MLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLFHVSRLDF 
Sbjct: 1   MLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLFHVSRLDFG 60

Query: 85  --------------------EGLEKL--------------------QNLQYFIMDDNPMQ 144
                                 L  L                     +LQ   +  NP  
Sbjct: 61  TYPYPSCKPTAIFPSFIFDLPHLHSLFFFNCFTQTNTTLSISPFSNSSLQQLSLRSNPAL 120

Query: 145 T-PLPLAFGELVKLQELRL----------------------------------------- 204
           T P+P     L  L+ L L                                         
Sbjct: 121 TGPIPSRLSSLKSLKILTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 205 ------------------------------------------------------------ 264
                                                                       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

[Close]

BLAST of CsGy6G013250.1 vs. NCBI nr
Match: XP_022970864.1 (protein TOO MANY MOUTHS-like [Cucurbita maxima])

HSP 1 Score: 134.8 bits (338), Expect = 4.2e-28
Identity = 66/83 (79.52%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 1  MYCFFFLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSW 60
          MYCFF LLL LFSPI AN LAP SMLPFE ETLFKIM+SMS+DQNWR+SYPNPCQPGSSW
Sbjct: 1  MYCFFVLLLPLFSPIFANKLAPNSMLPFEAETLFKIMESMSSDQNWRVSYPNPCQPGSSW 60

Query: 61 PGLECKSSFINNTNLFHVSRLDF 84
          PGLECK++   N  L HVSRLDF
Sbjct: 61 PGLECKAA-PTNLALLHVSRLDF 82

[Close]

BLAST of CsGy6G013250.1 vs. NCBI nr
Match: XP_023512766.1 (protein TOO MANY MOUTHS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.7 bits (335), Expect = 9.4e-28
Identity = 181/410 (44.15%), Postives = 201/410 (49.02%), Query Frame = 0


Query: 1   MYCFF-------FLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNP 60
           M CFF        LLL LFS   AN  AP SMLPFE ETLFKIM+S+S+DQNWRLS+PNP
Sbjct: 1   MLCFFPHSLFLLLLLLPLFSLPSANVAAPNSMLPFEAETLFKIMESLSSDQNWRLSHPNP 60

Query: 61  CQPGSSWPGLECKSSFINNTNLFHVSRLDFEGLEKLQNLQYFIMDDNP-MQTPLPLAFGE 120
           CQPG+SWPGLEC S+  NN++L HVSRLDF  L    +LQ      NP +  P+P     
Sbjct: 61  CQPGASWPGLECISA-PNNSHLLHVSRLDFAFLN--SSLQQLSFRSNPALVGPIPPRLSS 120

Query: 121 LVKLQELRLA-------------------------------------------------- 180
           L  L+ L L+                                                  
Sbjct: 121 LKYLKILTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ----------------------------------SCGYSGIXXXXXXXXXXXXXXXXXXX 258
                                                    XXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

[Close]

BLAST of CsGy6G013250.1 vs. TAIR10
Match: AT2G42800.1 (receptor like protein 29)

HSP 1 Score: 89.0 bits (219), Expect = 4.8e-18
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 4  FFFLLLS-LFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPG 63
          FFFLL++ LF  +   N    SM P E ETLFKIM+SMS+DQ WR S+PNPC PGSSWPG
Sbjct: 15 FFFLLITPLF--LCQENRVSASMPPSESETLFKIMESMSSDQQWRQSHPNPCAPGSSWPG 74

Query: 64 LECKSSFINNTNLFHVSRLDF 84
          +ECK+      +L HVSRLDF
Sbjct: 75 IECKT---GPDHLSHVSRLDF 90

HSP 2 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 0


Query: 187 RLGKNLDLTGNPSLCFSPSEAITAQKLGVTVCG---SKENGSFIQPSNKSLP-----RSS 246
           RLGKNLDL+GN  LC +P +  +  K GV VCG   S   G  +  S K        RS 
Sbjct: 382 RLGKNLDLSGNRGLCLNPEDEFSVVKTGVDVCGKNVSSGGGLSVHSSKKKSQASRYYRSC 441

Query: 247 FCCNP-FAFAICLLLH 254
           F  N  F FA+ L LH
Sbjct: 442 FFANALFPFALFLGLH 457

[Close]

BLAST of CsGy6G013250.1 vs. Swiss-Prot
Match: sp|Q9SJH6|RLP29_ARATH (Receptor like protein 29 OS=Arabidopsis thaliana OX=3702 GN=RLP29 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.7e-17
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 4  FFFLLLS-LFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPG 63
          FFFLL++ LF  +   N    SM P E ETLFKIM+SMS+DQ WR S+PNPC PGSSWPG
Sbjct: 15 FFFLLITPLF--LCQENRVSASMPPSESETLFKIMESMSSDQQWRQSHPNPCAPGSSWPG 74

Query: 64 LECKSSFINNTNLFHVSRLDF 84
          +ECK+      +L HVSRLDF
Sbjct: 75 IECKT---GPDHLSHVSRLDF 90

HSP 2 Score: 50.1 bits (118), Expect = 4.5e-05
Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 0


Query: 187 RLGKNLDLTGNPSLCFSPSEAITAQKLGVTVCG---SKENGSFIQPSNKSLP-----RSS 246
           RLGKNLDL+GN  LC +P +  +  K GV VCG   S   G  +  S K        RS 
Sbjct: 382 RLGKNLDLSGNRGLCLNPEDEFSVVKTGVDVCGKNVSSGGGLSVHSSKKKSQASRYYRSC 441

Query: 247 FCCNP-FAFAICLLLH 254
           F  N  F FA+ L LH
Sbjct: 442 FFANALFPFALFLGLH 457

[Close]

BLAST of CsGy6G013250.1 vs. TrEMBL
Match: tr|A0A1S3C2P2|A0A1S3C2P2_CUCME (protein TOO MANY MOUTHS OS=Cucumis melo OX=3656 GN=LOC103496332 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50
Identity = 215/445 (48.31%), Postives = 222/445 (49.89%), Query Frame = 0


Query: 1   MYCFFFLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSW 60
           MYCF FLLLSLFSPILANNLAPISMLPFELETLFKIMDSMS+DQNWRLS+PNPCQPGSSW
Sbjct: 1   MYCFSFLLLSLFSPILANNLAPISMLPFELETLFKIMDSMSSDQNWRLSHPNPCQPGSSW 60

Query: 61  PGLECKSSFINNTNLFHVSRLDF---------------------EGLEKL---------- 120
           PGLECKSS INNTN FHVSRLDF                       L  L          
Sbjct: 61  PGLECKSSLINNTNFFHVSRLDFGTYPYPSCKPTAIFPSFIFDLPHLHSLFFFNCFTHTN 120

Query: 121 ----------QNLQYFIMDDNPMQT-PLPLAFGELVKLQELRL----------------- 180
                      +LQ   +  NP  T P+P     L  L+ L L                 
Sbjct: 121 TTLSISPFSNSSLQQLSLRSNPALTGPIPSRLSSLKSLKILTLXXXXXXXXXXXXXXXXX 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ------------------------------------------------------------ 260
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

[Close]

BLAST of CsGy6G013250.1 vs. TrEMBL
Match: tr|A0A0A0KGZ9|A0A0A0KGZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169860 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.0e-47
Identity = 206/425 (48.47%), Postives = 210/425 (49.41%), Query Frame = 0


Query: 25  MLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLFHVSRLDF- 84
           MLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLFHVSRLDF 
Sbjct: 1   MLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLFHVSRLDFG 60

Query: 85  --------------------EGLEKL--------------------QNLQYFIMDDNPMQ 144
                                 L  L                     +LQ   +  NP  
Sbjct: 61  TYPYPSCKPTAIFPSFIFDLPHLHSLFFFNCFTQTNTTLSISPFSNSSLQQLSLRSNPAL 120

Query: 145 T-PLPLAFGELVKLQELRL----------------------------------------- 204
           T P+P     L  L+ L L                                         
Sbjct: 121 TGPIPSRLSSLKSLKILTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 205 ------------------------------------------------------------ 264
                                                                       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

[Close]

BLAST of CsGy6G013250.1 vs. TrEMBL
Match: tr|A0A1R3IMT5|A0A1R3IMT5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_11103 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.5e-16
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 18 NNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLFH 77
          +N  P +M P E ETLFKIM+SMS+DQ WR+SYPNPC+P SSWPG+ECK     + N  H
Sbjct: 35 DNSQPTAMAPSEAETLFKIMESMSSDQTWRVSYPNPCKPDSSWPGIECKPGL--SDNFLH 94

Query: 78 VSRLDF 84
          VSRLDF
Sbjct: 95 VSRLDF 98

[Close]

BLAST of CsGy6G013250.1 vs. TrEMBL
Match: tr|V4UAU0|V4UAU0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10018355mg PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.3e-16
Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 17  ANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLF 76
           A    P  MLP E ETLFKIMDSMS+DQ+WR+SY NPC+PGSSWPG+ECK     N    
Sbjct: 66  AKKQPPNGMLPSEAETLFKIMDSMSSDQSWRVSYSNPCKPGSSWPGIECKQ---GNDGYL 125

Query: 77  HVSRLDF 84
           HV+RLDF
Sbjct: 126 HVTRLDF 129

[Close]

BLAST of CsGy6G013250.1 vs. TrEMBL
Match: tr|A0A2H5QVP7|A0A2H5QVP7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_265850 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.3e-16
Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 17  ANNLAPISMLPFELETLFKIMDSMSTDQNWRLSYPNPCQPGSSWPGLECKSSFINNTNLF 76
           A    P  MLP E ETLFKIMDSMS+DQ+WR+SY NPC+PGSSWPG+ECK     N    
Sbjct: 62  AKKQPPNGMLPSEAETLFKIMDSMSSDQSWRVSYSNPCKPGSSWPGIECKQ---GNDGYL 121

Query: 77  HVSRLDF 84
           HV+RLDF
Sbjct: 122 HVTRLDF 125

The following BLAST results are available for this feature:

BLAST of CsGy6G013250.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143187.1	7.1e-60	51.22	PREDICTED: protein TOO MANY MOUTHS [Cucumis sativus]	[more]
XP_008456382.1	2.3e-50	48.31	PREDICTED: protein TOO MANY MOUTHS [Cucumis melo]	[more]
KGN47021.1	9.1e-47	48.47	hypothetical protein Csa_6G169860 [Cucumis sativus]	[more]
XP_022970864.1	4.2e-28	79.52	protein TOO MANY MOUTHS-like [Cucurbita maxima]	[more]
XP_023512766.1	9.4e-28	44.15	protein TOO MANY MOUTHS-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G013250.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42800.1	4.8e-18	60.49	receptor like protein 29	[more]

BLAST of CsGy6G013250.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJH6\|RLP29_ARATH	8.7e-17	60.49	Receptor like protein 29 OS=Arabidopsis thaliana OX=3702 GN=RLP29 PE=2 SV=1	[more]

BLAST of CsGy6G013250.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C2P2\|A0A1S3C2P2_CUCME	1.5e-50	48.31	protein TOO MANY MOUTHS OS=Cucumis melo OX=3656 GN=LOC103496332 PE=4 SV=1	[more]
tr\|A0A0A0KGZ9\|A0A0A0KGZ9_CUCSA	6.0e-47	48.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169860 PE=4 SV=1	[more]
tr\|A0A1R3IMT5\|A0A1R3IMT5_COCAP	5.5e-16	63.64	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_11103 PE=4 ...	[more]
tr\|V4UAU0\|V4UAU0_9ROSI	9.3e-16	64.18	Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10018...	[more]
tr\|A0A2H5QVP7\|A0A2H5QVP7_CITUN	9.3e-16	64.18	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_265850 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy6G013250	CsGy6G013250	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G013250.1.CDS.2	CsGy6G013250.1.CDS.2	CDS
CsGy6G013250.1.CDS.1	CsGy6G013250.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G013250.1.exon.2	CsGy6G013250.1.exon.2	exon
CsGy6G013250.1.exon.1	CsGy6G013250.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy6G013250.1	CsGy6G013250.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 28..219 e-value: 1.4E-30 score: 108.1
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 115..174 e-value: 2.5E-8 score: 33.5
None	No IPR available	PANTHER	PTHR45183:SF3	SUBFAMILY NOT NAMED	coord: 84..259 coord: 9..83
None	No IPR available	PANTHER	PTHR45183	FAMILY NOT NAMED	coord: 84..259 coord: 9..83
None	No IPR available	SUPERFAMILY	SSF52058	L domain-like	coord: 77..219