CsGy6G008960.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G008960.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	putative lipid-binding protein At4g00165
Location	Chr6 : 7425490 .. 7426390 (+)
Sequence length	477

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCAAATTTGTGAAGGTATTGGCTCTTGTAGTCTTGTTGAATATCATAGCTTTGGCTTGTGTTTCATCTGTCAAACCGAGTTGCCCTCCGAAGGTTCGACCATCACCTGCTACCACTCCGGCAACGCAGGCGAAGTGCCCGAAAGATACACTAAAGTTTGGGGTTTGTGGGAGCTGGCTTGGGCTGATATCCGAGCAGATTGGAGCAAAACCAAGCAAGAAATGTTGTAGTTTGTTGACGGGATTGGCCGATCTCGAAGCTGCATTGTGCTTGTGCACTGCGTTGAAAGCGAATGTGCTGGGTGTTGTTAGCCTCGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGAAAAAGTATTCCACAAGGCTTTGTCTGTCCTTAAATTAGAGAGATTAAGTTCATGTTGTTTGTCTCATGTTAACTTGTTGTTTGATTGTAATCTTTGATTAAGTAAAAATCTTGAGCGTTTTGTATTTATATTTTACTTTGGTTTTTTTTTTTTTTTTTTGTATGGTATAAATTTATTTTTGACAACCTATGGAGTGAGAAACTAAACCTAGCTCTAAACCTTAATGACACAATTGAACTATATATGTTTATCATTTTTCTACGTGTGTAATGATATTGTTTTTAGCTTTTCTCAAGTGTAGATAGGACAAACAAATCAAAGCTATCACTGCTAAATGATAATGTGAATGAAAATATAATCCTCAAGATTAATAAGTATTTGTAACAAATAGTGTTTCAATGCCATCATTCGAATTTTAGGCTTTAATCAAAATTTATTCTAAGTTTTGCAATATATCTCATTCATTATTTTCCATTTTTTCACATATAATTTTTCCTCAAGATTCAAACAGAAGTGCATATACATGGAAAACGTATAG

mRNA sequence

ATGGAGCTCAAATTTGTGAAGGTATTGGCTCTTGTAGTCTTGTTGAATATCATAGCTTTGGCTTGTGTTTCATCTGTCAAACCGAGTTGCCCTCCGAAGGTTCGACCATCACCTGCTACCACTCCGGCAACGCAGGCGAAGTGCCCGAAAGATACACTAAAGTTTGGGGTTTGTGGGAGCTGGCTTGGGCTGATATCCGAGCAGATTGGAGCAAAACCAAGCAAGAAATGTTGTAGTTTGTTGACGGGATTGGCCGATCTCGAAGCTGCATTGTGCTTGTGCACTGCGTTGAAAGCGAATGTGCTGGGTGTTGTTAGCCTCGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGAAAAAATAGGACAAACAAATCAAAGCTATCACTGCTAAATGATAATGTGAATGAAAATATAATCCTCAAGATTAATAAATTCAAACAGAAGTGCATATACATGGAAAACGTATAG

Coding sequence (CDS)

ATGGAGCTCAAATTTGTGAAGGTATTGGCTCTTGTAGTCTTGTTGAATATCATAGCTTTGGCTTGTGTTTCATCTGTCAAACCGAGTTGCCCTCCGAAGGTTCGACCATCACCTGCTACCACTCCGGCAACGCAGGCGAAGTGCCCGAAAGATACACTAAAGTTTGGGGTTTGTGGGAGCTGGCTTGGGCTGATATCCGAGCAGATTGGAGCAAAACCAAGCAAGAAATGTTGTAGTTTGTTGACGGGATTGGCCGATCTCGAAGCTGCATTGTGCTTGTGCACTGCGTTGAAAGCGAATGTGCTGGGTGTTGTTAGCCTCGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGAAAAAATAGGACAAACAAATCAAAGCTATCACTGCTAAATGATAATGTGAATGAAAATATAATCCTCAAGATTAATAAATTCAAACAGAAGTGCATATACATGGAAAACGTATAG

Protein sequence

MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKNRTNKSKLSLLNDNVNENIILKINKFKQKCIYMENV

Homology

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BLAST of CsGy6G008960.1 vs. NCBI nr
Match: XP_004140487.1 (PREDICTED: putative lipid-binding protein At4g00165 [Cucumis sativus] >KGN46569.1 proline-rich protein DC2.15 [Cucumis sativus])

HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKN 124
           GK+
Sbjct: 121 GKS 123

[Close]

BLAST of CsGy6G008960.1 vs. NCBI nr
Match: XP_008458132.1 (PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo])

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 2   ELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSW 61
           ELKFVK+LALVVLLNIIALACVSS KPSCPPKVRPSPATTP TQAKCPKDTLKFGVCGSW
Sbjct: 3   ELKFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSW 62

Query: 62  LGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG 121
           LGLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG
Sbjct: 63  LGLISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG 122

Query: 122 KN 124
           K+
Sbjct: 123 KS 124

[Close]

BLAST of CsGy6G008960.1 vs. NCBI nr
Match: XP_022964428.1 (putative lipid-binding protein At4g00165 [Cucurbita moschata])

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           M L+  K LALV LLNIIALACVSS KP C PKV+PSPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKN 124
           GK+
Sbjct: 121 GKS 123

[Close]

BLAST of CsGy6G008960.1 vs. NCBI nr
Match: XP_023000073.1 (putative lipid-binding protein At4g00165 [Cucurbita maxima])

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 103/123 (83.74%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           M L+  K LALV LLN+IALACVSS KP C PKV+PSPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNVIALACVSSAKPGCSPKVQPSPATTPTAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKN 124
           GK+
Sbjct: 121 GKS 123

[Close]

BLAST of CsGy6G008960.1 vs. NCBI nr
Match: XP_023514898.1 (putative lipid-binding protein At4g00165 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           M L+  K LALV LLNIIALACVSS KP C PKV+PSPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKN 124
           GK+
Sbjct: 121 GKS 123

[Close]

BLAST of CsGy6G008960.1 vs. TAIR10
Match: AT4G00165.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 6.2e-29
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 4   KFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLG 63
           K ++ L +++LLNI        V P    K  P P    AT  KCP+DTLKFGVCGSWLG
Sbjct: 5   KALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKN 123
           L+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NSCGKN
Sbjct: 65  LVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKN 121

[Close]

BLAST of CsGy6G008960.1 vs. TAIR10
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-20
Identity = 47/75 (62.67%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 48  CPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSL 107
           CP DTLK GVC   LGL++  +G+ P   CC+LL GLA+LEAA+CLCTALKANVLG ++L
Sbjct: 52  CPTDTLKLGVCADLLGLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLG-INL 111

Query: 108 DVPIALSLVVNSCGK 123
           +VPI L+L++N CGK
Sbjct: 112 NVPIDLTLLLNYCGK 125

[Close]

BLAST of CsGy6G008960.1 vs. TAIR10
Match: AT4G12520.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 5.3e-20
Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 48  CPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVS 107
           CPKDTLK GVC + L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA VLG ++
Sbjct: 46  CPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-IN 105

Query: 108 LDVPIALSLVVNSCGK 123
           L+VP++LSL++N CGK
Sbjct: 106 LNVPVSLSLLLNVCGK 120

[Close]

BLAST of CsGy6G008960.1 vs. TAIR10
Match: AT4G12510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 5.3e-20
Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 48  CPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVS 107
           CPKDTLK GVC + L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA VLG ++
Sbjct: 46  CPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-IN 105

Query: 108 LDVPIALSLVVNSCGK 123
           L+VP++LSL++N CGK
Sbjct: 106 LNVPVSLSLLLNVCGK 120

[Close]

BLAST of CsGy6G008960.1 vs. TAIR10
Match: AT1G12090.1 (extensin-like protein)

HSP 1 Score: 94.0 bits (232), Expect = 9.0e-20
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 47  KCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVV 106
           KCPKDTLK GVC + L GL+   +G  P + CCSL+ GLAD+EAA+CLCTALKAN+LG +
Sbjct: 54  KCPKDTLKLGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILG-I 113

Query: 107 SLDVPIALSLVVNSCGK 123
           +L++PI+LSL++N C K
Sbjct: 114 NLNLPISLSLLLNVCSK 129

[Close]

BLAST of CsGy6G008960.1 vs. Swiss-Prot
Match: sp|Q8RW93|LBP65_ARATH (Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g00165 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 4   KFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLG 63
           K ++ L +++LLNI        V P    K  P P    AT  KCP+DTLKFGVCGSWLG
Sbjct: 5   KALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKN 123
           L+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NSCGKN
Sbjct: 65  LVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKN 121

[Close]

BLAST of CsGy6G008960.1 vs. Swiss-Prot
Match: sp|Q9S7I2|AIR1_ARATH (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-18
Identity = 42/83 (50.60%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 41  TPATQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN 100
           T AT   CPK++++ G C + L L+   +G  P K CCSL+ GLADLEAA+CLCTA+KA+
Sbjct: 21  TSATTGTCPKNSIEIGTCVTVLNLVDLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKAS 80

Query: 101 VLGVVSLDVPIALSLVVNSCGKN 124
           +LG+V++++PI LS+++N C +N
Sbjct: 81  ILGIVNINLPINLSVLLNVCSRN 103

[Close]

BLAST of CsGy6G008960.1 vs. Swiss-Prot
Match: sp|Q01595|CCDP_MAIZE (Cortical cell-delineating protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-17
Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 9   LALVVLLNIIALACVSSVKPSCPPKVRPSPATTPA----TQAKCPKDTLKFGVCGSWLGL 68
           +AL + L+++  A     +P+C   V P+P   P     +  +CP D LK  VC   LGL
Sbjct: 5   VALFLALSLLFAATAHGCEPNCSGPVVPTPPVVPTPSSHSHGRCPIDALKLKVCAKVLGL 64

Query: 69  ISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 123
           +  ++G    ++CC LL GL DL+AALCLCTA+KANVLG + L+VP++L+ ++N+CG+
Sbjct: 65  V--KVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLG-IHLNVPLSLNFILNNCGR 119

[Close]

BLAST of CsGy6G008960.1 vs. Swiss-Prot
Match: sp|P14009|14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.8e-17
Identity = 59/126 (46.83%), Postives = 76/126 (60.32%), Query Frame = 0


Query: 9   LALVVLLNIIALACVSSVKPSCP-------PKVRPSPATTPATQAKCPKDTLKFGVCGSW 68
           +AL   LNI+  A VSS +  CP                      KCP+D LK GVC   
Sbjct: 9   VALFFTLNILFFALVSSTE-KCPDPYXXXXXXXXXXXXXXXXXAGKCPRDALKLGVCADV 68

Query: 69  LGLI-SEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 127
           L L+ +  IG+ P+  CCSLL GL +LEAA+CLCTA+KAN+LG  +L++PIALSLV+N+C
Sbjct: 69  LNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILG-KNLNLPIALSLVLNNC 128

[Close]

BLAST of CsGy6G008960.1 vs. Swiss-Prot
Match: sp|Q9SU34|ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.9e-17
Identity = 44/86 (51.16%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 38  PATTPATQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTA 97
           P  TP +   CP D L+ GVC + L GL++ Q+G    + CCSL+ GL DL+AA+CLCTA
Sbjct: 89  PPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTA 148

Query: 98  LKANVLGVVSLDVPIALSLVVNSCGK 123
           L+ANVLG ++L+VPI+LS+++N C +
Sbjct: 149 LRANVLG-INLNVPISLSVLLNVCNR 173

[Close]

BLAST of CsGy6G008960.1 vs. TrEMBL
Match: tr|A0A0A0KCL7|A0A0A0KCL7_CUCSA (Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_6G109650 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.0e-57
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKN 124
           GK+
Sbjct: 121 GKS 123

[Close]

BLAST of CsGy6G008960.1 vs. TrEMBL
Match: tr|A0A1S3C8D8|A0A1S3C8D8_CUCME (putative lipid-binding protein At4g00165 OS=Cucumis melo OX=3656 GN=LOC103497659 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 2   ELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSW 61
           ELKFVK+LALVVLLNIIALACVSS KPSCPPKVRPSPATTP TQAKCPKDTLKFGVCGSW
Sbjct: 3   ELKFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSW 62

Query: 62  LGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG 121
           LGLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG
Sbjct: 63  LGLISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG 122

Query: 122 KN 124
           K+
Sbjct: 123 KS 124

[Close]

BLAST of CsGy6G008960.1 vs. TrEMBL
Match: tr|A0A2P5CLG1|A0A2P5CLG1_9ROSA (HMW glutenin OS=Trema orientalis OX=63057 GN=TorRG33x02_280640 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37
Identity = 78/116 (67.24%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 7   KVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLGLIS 66
           K +AL ++ N++   CV+S K  CPPK+ PSPA  P TQ KCPKDTLKFGVCGSWLGL++
Sbjct: 7   KSIALFIVFNLMLFNCVTSNKVPCPPKITPSPAPVPKTQGKCPKDTLKFGVCGSWLGLVT 66

Query: 67  EQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 123
           E +G KPSK+CC+L+ GLADLEAALCLCTA+KANVLGV+ + VPIA+SL+VN+CGK
Sbjct: 67  EVVGTKPSKECCTLIKGLADLEAALCLCTAIKANVLGVIKVKVPIAVSLLVNACGK 122

[Close]

BLAST of CsGy6G008960.1 vs. TrEMBL
Match: tr|A0A2P5BES0|A0A2P5BES0_PARAD (HMW glutenin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_245410 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36
Identity = 78/117 (66.67%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 6   VKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLGLI 65
           +K +AL ++ N++   CV+S    CPPK  PSPA  P TQ KCPKDTLKFGVCGSWLGL+
Sbjct: 6   LKSIALFIVFNLMLFNCVTSNNVPCPPKGAPSPAPVPKTQGKCPKDTLKFGVCGSWLGLV 65

Query: 66  SEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 123
           +E +G KPSK+CC+L+ GLADLEAALCLCTA+KANVLGVV + VPIA+SL+VN+CGK
Sbjct: 66  TEVVGTKPSKECCTLIKGLADLEAALCLCTAIKANVLGVVKVKVPIAVSLLVNACGK 122

[Close]

BLAST of CsGy6G008960.1 vs. TrEMBL
Match: tr|M5X1J3|M5X1J3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G139600 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 9.2e-35
Identity = 77/115 (66.96%), Postives = 94/115 (81.74%), Query Frame = 0


Query: 7   KVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLGLIS 66
           + + L +L NII L+ VSS K  CPP    SPA+ P  Q KCP+DTLKFGVCGSWLGL++
Sbjct: 7   QAVVLFILFNIICLSLVSSNKVPCPPTSPSSPASVPKKQDKCPRDTLKFGVCGSWLGLVT 66

Query: 67  EQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG 122
           E IG KPSK+CC+L+ GLADLEAALCLCTA+KANVLG+V L+VP+ALSL+VN+CG
Sbjct: 67  EVIGTKPSKECCTLIKGLADLEAALCLCTAIKANVLGIVKLEVPVALSLLVNACG 121

The following BLAST results are available for this feature:

BLAST of CsGy6G008960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140487.1	1.5e-57	99.19	PREDICTED: putative lipid-binding protein At4g00165 [Cucumis sativus] >KGN46569....	[more]
XP_008458132.1	1.9e-55	95.90	PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo]	[more]
XP_022964428.1	1.1e-47	84.55	putative lipid-binding protein At4g00165 [Cucurbita moschata]	[more]
XP_023000073.1	1.1e-47	83.74	putative lipid-binding protein At4g00165 [Cucurbita maxima]	[more]
XP_023514898.1	1.1e-47	84.55	putative lipid-binding protein At4g00165 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G008960.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00165.1	6.2e-29	55.83	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G45180.1	1.4e-20	62.67	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12520.1	5.3e-20	64.47	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12510.1	5.3e-20	64.47	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G12090.1	9.0e-20	61.04	extensin-like protein	[more]

BLAST of CsGy6G008960.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RW93\|LBP65_ARATH	1.1e-27	55.83	Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g...	[more]
sp\|Q9S7I2\|AIR1_ARATH	3.6e-18	50.60	Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2...	[more]
sp\|Q01595\|CCDP_MAIZE	4.0e-17	42.37	Cortical cell-delineating protein OS=Zea mays OX=4577 PE=2 SV=1	[more]
sp\|P14009\|14KD_DAUCA	6.8e-17	46.83	14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1	[more]
sp\|Q9SU34\|ERLL2_ARATH	8.9e-17	51.16	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]

BLAST of CsGy6G008960.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCL7\|A0A0A0KCL7_CUCSA	1.0e-57	99.19	Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_6G109650 PE=4 SV=1	[more]
tr\|A0A1S3C8D8\|A0A1S3C8D8_CUCME	1.2e-55	95.90	putative lipid-binding protein At4g00165 OS=Cucumis melo OX=3656 GN=LOC103497659...	[more]
tr\|A0A2P5CLG1\|A0A2P5CLG1_9ROSA	2.0e-37	67.24	HMW glutenin OS=Trema orientalis OX=63057 GN=TorRG33x02_280640 PE=4 SV=1	[more]
tr\|A0A2P5BES0\|A0A2P5BES0_PARAD	3.7e-36	66.67	HMW glutenin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_245410 PE=4 SV=1	[more]
tr\|M5X1J3\|M5X1J3_PRUPE	9.2e-35	66.96	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G139600 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR027923	Hydrophob_seed
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy6G008960	CsGy6G008960	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G008960.1.CDS.1	CsGy6G008960.1.CDS.1	CDS
CsGy6G008960.1.CDS.2	CsGy6G008960.1.CDS.2	CDS
CsGy6G008960.1.CDS.3	CsGy6G008960.1.CDS.3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy6G008960.1	CsGy6G008960.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 48..120 e-value: 0.0058 score: 25.8
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 42..132 e-value: 2.1E-20 score: 74.2
None	No IPR available	PANTHER	PTHR31731:SF28	SUBFAMILY NOT NAMED	coord: 2..124
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 2..124
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..22 score: 6.0
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 47..125 e-value: 1.6E-22 score: 79.4
IPR027923	Hydrophobic seed protein	CDD	cd01958	HPS_like	coord: 46..123 e-value: 6.25518E-25 score: 92.0064
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 51..124