CsGy6G008860.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTTAGATTTATTTGGGTTTGAATCAATAGCTATTATCTACATATACATATAAATAGTGGATCCACTTTTTACTATATGTTCAAAATCTTCAAAATGTAATTGATCTTTTTTTCTTCTTTCTATTACAAAAGAGTCATTGAATTAAACCTTAGGCTTGCATCTAATTTAACCAAATTTAAGGAAAGGTTTTTTATTCTAATTATATGTTCAACTACCAAGTGGTTGTTAGTCATATTTTTGCAGTTATAATAATTTAGATGTTAGTTTATTGTCGTTTATCCTTCCTCTACCATTGTTAAACAAAGATATTTTATCATTTTACTAAGATCTATAATGTTCGACACTCGTTAAAATTTTGGAAGGCTATCTAAAGACAGACCATTAGGTTGTATATAGAAAAATAATAATGTAGAATGTGATTTTGTATTATTGGAATTAGATTTTTTATGTGTTGACATGACTATGAACATTTATCACCATCCTTTTTGTAATTTTTTTTATCTAGCTAGTTGTATGGTTCGAGCATTCATGTAACATCAATCAATTTTCGTGTGGGATGTTCCAATGTTAAACAAGAAACTAATTCTTCTTATCTTTTTTGTCTTCGTTCATAAAGTTTTTCTAATTCTTTAGGGATCACATGGTTATCATTCATGTATATTTGATTGATTAAATACACTTTGATATGTTTGAAGTCTTACTTATACACTTGATGTACTATTGACATATACTTATAAACTTGATTCATATATTTGATAATGATTCGCTTGACTGATATGCTTTAACAATATACTGTTGATATACTTGATAATGATACACTGAGTTATATCATTCATATACTTAATAATATTATGATAAATTGCATAAAATTTGAAAATAAATGAAAATCACATAGTAAGTATATCAACCAACTTATACATATAATATAAATATATCACAACACTGGTATACAAAACTAAGACAAAGTAAAATCAAAATAAAATCAATTTAAAAGAATAGAACAAAATCATTTGAAATCAGATTCAACTCAAAATACACATCGAAAAAAGTAAAAAAAAATCACAAATAAAATTAAATTACTCTGATCAACAATCATTATATTTCACATTACAACTAGTGTACTATTGATATTCTAAAATCAAGATTAAGACATAAAGAACAAATAATTCTTCTCGTATAAGAATAAATAAATAATTAGGGCCTTAAAAAGTGAGATAATAAATAAATAATGAGTAAGACATTAAAATGAAAAAAAGAAATAAGCGATTGAATGATAGTTTAGGAATAATAACAAATTTAAAATAGAGAGTTTTTTATAAATGAAAATTTTGTCATATTTACAAAATTCTAAAACAACGTGCTATGTTTGTTATATCATATTATCAAAATACTACCCTATACAGTTTTTCTAGATATTTTATCATAATTATTTAGTTAAACGTTGAATTCTTAAATAAAAATATAATAATTACTAATTTCATAATTCTAAATTAAATAACTAACTTATAAAAGCAAACATATGATAATGGAAAATATTTTAAACATATCAAAACCATAGTTGGATACCCAAACATATATTTAATTATTTAATTGTTTAAAATTCAAATGTGCTTAAATCTTTTTTTTTTTTCTAAAATCATTAACTCACTGTGAATGACTCTGAAATGGTACCCTAAATCTTGTTATAAATTAAATTGTTTACCCAAATAAAATTTTCTCGTAAAAAAAAGTTTTTCAATTAAACAAAACTTTAGATGAAAAAACTTAAAAAGTACAGGAAAAAAAGGAACAATTAAACACTAAGAAGTTCATACTTCTCCATAAAAGAAAGTAAACTTAACACACAAATGCAAATAAAAAGTGCAAAAACATAAAATTCTCTCCACTAATCTTGTTTATTACATAATATACGATCATGTGGAGTTTGACACAATAAAACAACAAAGTCTTTCCTGGCCACAGCTTCTTGATCAAATCTTCTTCTCTTCAACTTCATAATTGTAACTGTAGCAATTAAGGCCAGTGTATATCCCATCATCACGTTCTTCAGTCTTCACAGCTCTATCGCAGTAAACATCTCGTTGCATGTACGAGAAGGGGATGTCACACTTACCCTTGGTAGCTATCAAACTCACTTTCACGTAAGTATTCGGTGGCATGATGGTTTCGTACGACGACTCTTTGGACGTCTTCTTGGTCAAAGTTTCTCCCCAAGAATAGGATCCCGAAATCTCTCCAGAAACAATAATGCCTGCAGATGTAATTAATGGAATCCCATCACTAAATTCTAATCCAAAACCAAGTTTCATCTCAAGTGTATTGTTCCAAGTAGTAGTTACTTCATTAGTATAAGGGAGACTCAAGGTTTGAGTAAGGTATCCACTTGTGTCATTTGTAGCATCTTGAGTGGCGGCCACTTCAAAAAACAAAAAATTGAGCACTTCATTGTTATAGAAAAAACATTAGATTAAAGAAAATATATAACACATTTCTTTCAACCATACAACTAAAATCACAAAGATTGAAAATAACATACAAATTAGGTTCAACAATCCTATTTTGGTTATTGATCATTGTTCGAACAAATAATATAATAGATTTAAGAGATTCAAATACATATAATACGGTAGAATTATAAGCATACACTAAAATTTTAAAATTAGTCTAAAAAAAACACCCCATTTAACTCAAACTCAAATCAACTCAAGAATATTCATCCACCAAAACTTGGGTTTGTAATATATTTGGAAGTTTGTGCAATAATTAGTCTACAAAAAATAATTAGAATAGGAACATCTTTGTTATAACTTATTGCACATCAATAATTTAATTCCATAACCTTCTAAAGTTTCTTTTCATACCAAAAATGTCCAAACTCTACTGGAAGCAACACGATGAGCGAGCGTCATTCGTTCAAGCAAGGGACAAAGACAACACGTTCGAGGGGCTTTCCGACCATATCATGCCACCGAATGCACTGCATCTGAGAGACCAAGCGCCAACGACCGATAATATTTTATGAATATTTTTAGCTAAAATATGTAAAAAAAACAGTAAACGGTGGCAAAAAAATTCTCATTTTTTAGTACTTGATTCTTTTACATTGCTTAGCTCCCATAAAAAACTTTCATAAAAATCTGAGCATTGGAAGATAGGTTTGACATCCCTCCACCTCGCTCCTTGCACGGCCTAGGGGCTTGGTGATTGGAACGTTGACCGTAGCCACATATGGGTGTCGTCACGCCTAATGTTTTATGTTCTTCTATTGTTAATATATATAGAAGAAGAAAGAAATACAAAATTTTGAACCATAGAGAAACTTTAAGGTGAAAGAAGCTGTTCTTTCAAGAGAGATTTATAATGTTCAATACAGACTTTCAGATGGGAGAATATATGGAGAGAGTAAAGGCTGTGGATTTTCAAGGAGCCATGAATGGGAGCGATGAAGTGAATACAGTGAAGTTTAAGTTTTCTTATGAGGAAGAAAGTCAGTGTTGGAGCTCAACAGTTGGAATGAAATTGGCTTATTCAATGACAATAGAAGCTGGAATTCCATTCATTATGAAGACAAATATTGTAATATCAGGGGATATTTCAGATTCTTACACATGGGGACAAACCAATAAGAAATCAACTCCTAAAACATCTTCATATTCACTTGAAGTACAGCCAAGAACTTCAGTCAAAATGAATGCCATGGTAACCAAAGGATATTGTGATGTTCCATTCTCATACACTCAACGTGATGTTCTTGTCAATGGACAAACAGTACTTACAGATCATGATGATGGTTTATTCACAGGACTTAGTTGCTACAACTTCCACTATCAATCTGAAAATGTTAAATCCTTATCCACTTTACCATCTAATTAA ATGGGCTTAGATTTATTTGGTTATAATAATTTAGATGTTACAATTAAGGCCAGTGTATATCCCATCATCACGTTCTTCAGTCTTCACAGCTCTATCGCAGTAAACATCTCGTTGCATGTACGAGAAGGGGATGTCACACTTACCCTTGGTAGCTATCAAACTCACTTTCACGTAAGTATTCGGTGGCATGATGGTTTCGTACGACGACTCTTTGGACGTCTTCTTGGTCAAAGTTTCTCCCCAAGAATAGGATCCCGAAATCTCTCCAGAAACAATAATGCCTGCAGATGAGCCATGAATGGGAGCGATGAAGTGAATACAGTGAAGTTTAAGTTTTCTTATGAGGAAGAAAGTCAGTGTTGGAGCTCAACAGTTGGAATGAAATTGGCTTATTCAATGACAATAGAAGCTGGAATTCCATTCATTATGAAGACAAATATTGTAATATCAGGGGATATTTCAGATTCTTACACATGGGGACAAACCAATAAGAAATCAACTCCTAAAACATCTTCATATTCACTTGAAGTACAGCCAAGAACTTCAGTCAAAATGAATGCCATGGTAACCAAAGGATATTGTGATGTTCCATTCTCATACACTCAACGTGATGTTCTTGTCAATGGACAAACAGTACTTACAGATCATGATGATGGTTTATTCACAGGACTTAGTTGCTACAACTTCCACTATCAATCTGAAAATGTTAAATCCTTATCCACTTTACCATCTAATTAA ATGAATGGGAGCGATGAAGTGAATACAGTGAAGTTTAAGTTTTCTTATGAGGAAGAAAGTCAGTGTTGGAGCTCAACAGTTGGAATGAAATTGGCTTATTCAATGACAATAGAAGCTGGAATTCCATTCATTATGAAGACAAATATTGTAATATCAGGGGATATTTCAGATTCTTACACATGGGGACAAACCAATAAGAAATCAACTCCTAAAACATCTTCATATTCACTTGAAGTACAGCCAAGAACTTCAGTCAAAATGAATGCCATGGTAACCAAAGGATATTGTGATGTTCCATTCTCATACACTCAACGTGATGTTCTTGTCAATGGACAAACAGTACTTACAGATCATGATGATGGTTTATTCACAGGACTTAGTTGCTACAACTTCCACTATCAATCTGAAAATGTTAAATCCTTATCCACTTTACCATCTAATTAA MNGSDEVNTVKFKFSYEEESQCWSSTVGMKLAYSMTIEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVKMNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVKSLSTLPSN
BLAST of CsGy6G008860.1 vs. NCBI nr
Match: XP_008458669.1 (PREDICTED: uncharacterized protein LOC103497997 [Cucumis melo]) HSP 1 Score: 247.3 bits (630), Expect = 3.3e-62 Identity = 121/148 (81.76%), Postives = 134/148 (90.54%), Query Frame = 0
BLAST of CsGy6G008860.1 vs. NCBI nr
Match: KGN46563.1 (hypothetical protein Csa_6G108610 [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34 Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of CsGy6G008860.1 vs. NCBI nr
Match: XP_023521953.1 (uncharacterized protein LOC111785802 [Cucurbita pepo subsp. pepo] >XP_023544074.1 uncharacterized protein LOC111803768 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 131.7 bits (330), Expect = 2.0e-27 Identity = 62/136 (45.59%), Postives = 88/136 (64.71%), Query Frame = 0
BLAST of CsGy6G008860.1 vs. NCBI nr
Match: XP_023543607.1 (natterin-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 131.7 bits (330), Expect = 2.0e-27 Identity = 62/136 (45.59%), Postives = 88/136 (64.71%), Query Frame = 0
BLAST of CsGy6G008860.1 vs. NCBI nr
Match: XP_022967680.1 (uncharacterized protein LOC111467133 [Cucurbita maxima]) HSP 1 Score: 131.3 bits (329), Expect = 2.6e-27 Identity = 61/136 (44.85%), Postives = 88/136 (64.71%), Query Frame = 0
BLAST of CsGy6G008860.1 vs. TrEMBL
Match: tr|A0A1S3C8I1|A0A1S3C8I1_CUCME (uncharacterized protein LOC103497997 OS=Cucumis melo OX=3656 GN=LOC103497997 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 2.2e-62 Identity = 121/148 (81.76%), Postives = 134/148 (90.54%), Query Frame = 0
BLAST of CsGy6G008860.1 vs. TrEMBL
Match: tr|A0A0A0KAR2|A0A0A0KAR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108610 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34 Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of CsGy6G008860.1 vs. TrEMBL
Match: tr|A0A1S3C8E4|A0A1S3C8E4_CUCME (uncharacterized protein LOC103497999 OS=Cucumis melo OX=3656 GN=LOC103497999 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.6e-27 Identity = 56/123 (45.53%), Postives = 83/123 (67.48%), Query Frame = 0
BLAST of CsGy6G008860.1 vs. TrEMBL
Match: tr|A0A2R6R6R8|A0A2R6R6R8_ACTCH (Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10740 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.3e-26 Identity = 58/140 (41.43%), Postives = 87/140 (62.14%), Query Frame = 0
BLAST of CsGy6G008860.1 vs. TrEMBL
Match: tr|A0A2P6QKP7|A0A2P6QKP7_ROSCH (Putative aerolysin, Agglutinin domain, aerolysin-like toxin, beta complex domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0072501 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.8e-25 Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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