CsGy6G004100.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G004100.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Putative mitochondrial acidic protein MAM33-like
Location	Chr6 : 3808347 .. 3817781 (-)
Sequence length	2050

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCAAAATCGGAGGAAAATGTTGAAGAAAATGATGGCCGCCTCTGCGGTGGCCCTCCGGAGTGGCACTCGGCCGTCTCTCATGTTCACTTGCCGCCATTCCACCTCCGCATCCTCCGCCGTCAACTCCTTCCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCACCAGAATGGCGGCTCCTCCAGTATGATTTCCATGCTCTGTTCTCTCTTTTCAATCATTAAACCCTAGAATTAGGGTTTTAAGCTACGGGAATGTAGTTTTTTTCTTTTCTTTCTCTTACTTAGCTACTTGATTTTTATTGCAGAAAGTGAGCCCTCCTTCTTCCTTTTCTATCATAGTAGGCGCATTAGACGGCAATGGACCGGTGCTTACTAAGAACTACGGGAAAGAAGAGATTAACATTTCGGTTATGCGATTGGCTAATATTGTTCGGGGAGGTGGTGGAGGCGACGACGATGATGAAATTAACCAGTTGTTTCTGCATGTGACTGTATCGAAGCTGGAGCAGAAGGATAATTTGCATTTTCTTTGTGGGTTGTATCCTGATGCCTTAGGTATTCATTCCGTTTCGATGAGACCGAAAGCCGAATCTTCGGGGTCGGGGTTTCTCGTTGTTCCGTCCAGCTATAATGGTCCTACATTCGAGTAAGTTCAATGTCTTTTAATTATTCAGCCTCAATTATATTGAAGTTTGTTGTCTCATGTTGTAGTTTTTGGTGGTGGTTCATCAATTAAAGAAATGCTTGTACTTTAGATCCTGTCTTAATTTTTAATGTTATCAACTAAACTAACAAAAACAGAATCAGATAAAGTAATCAAAGGAGAAAGGTATGAATTAAGATTTAATTGAAGGTTATGGAGTTCAAGTTCTGTTGCCGAGTACAATTTACTGCCAAATAACTTGTAACTTGAACTGAACAGGAACAACACAACCCAATTGGTAATGAAATATTCTGATTTCTGGATGTGAGTTCGGTTCATAGGTTATAAGTATTCAGTTAATTTTTCTTAAGTAATTATTGTTTATTGCCTAAATGCTTATCATTTTAGTCTCCAGTGTTTGAATCTTCATTTGCAGCTACCTATTTTGTTCCTTCACTTGCAGGCTGCACCCACTGATTCTTTGGCTACAAAATTAGACTTTGTTTTTCACTCCCACAACTGATTTAATTTCTTCTCTTGCAGTTGATTTAATCCCTCATATCATGCTAGTCACTCACTTGAGATGCTTGCATCCTAGTACCTAGCATCATAGCATAGTGCAAATTTGCAGATTTTAATAAGTTATTAGTACCTTTTGGTTTGGTTGTATGGTGTTGTTCTATAATCCTTTTTATTTTCTTTTTGTGAAAGCCATCTCTGGTTAAAAGGTTTTGCTCGTAGAAACCTGTTTGGCTGTTCATCTTAATTGGTTTAGATATGGTATCTAAGGATCATGATAGTAGTTTTTCTTTTCACTGTGTATATGTTCGTTTCTATGAACCCAAGTGGGATTGCGATGTTTTCGGCCTTAGATGTTCATATACTGATGATCTATGCCAAATTACTGGAGATGGCAAAACACGCCATAAGAAAACTTACACTTAAACTTTTCCTTGGATGACAGAGATCTGGATGAGAAAATGCGAGATATGTTTCACAATTATATAGAAGAGCGAGGTGTGAATGAGTCCCTCTTTCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAAATCTTTTGCGGTGGTTCAGATCAGTTGGCACATTCATCTACGAGCCCAAGAATGGTAAAAAGGATTGATAGTTAACTGGATAGAAAAACTGTTAGTCTGGATGCTTTGATTTTGTGGAATTCAGGGTTCCATCTTCAAAATTGGTTATAGGTGGTGTATCAGGTAAATGGTCCATTTCACTTTAGTTATACAATTTTGTAAGCCCTTTACGTGATGATATATCCCTTCTTGATAAGCCATGGTGTTGTTTTTCAAATGTGATTAGATTAACGTTGAATTTGAGCAACCAACGTTGCTTTGTTTGAAACTTTATTTCTCTTATGACCCATGGTTTATGTGCCGCTAATGTAGCGGCTTGTCGAGCATTTGACAAACTCACACCATCCATGTCAAATGGGATTTGTCTCGTGGACACACAAGCAATCCAACCTGTAAGGTTTCCTTTTCTTGAGTTGCTTTTGAAACTTTTAGCATTATTTTCTCTTGATCAATCAAATTTTCTAAGGAAGTGAATAGTTTTGACCTGCATTTACTTATTTATAAATGAATGTGGACATTTGTTGATGCTGACATTCAACATCCGTTCTTAATACTTTGAAGTTTATTTAATTTTAATCTCTATATGGTCATTCTAATTGTAAATGTATTAGCCACCTATTTTTATCCTACATATTTATTTTATTTTTTAAAAAATAATAATAGTAATAATAGCTAAGATTTAAAATTTTTTAAAAGCTAAAAGTTTTGTAATAATATAAAATGAAAATAAAATCTTAACGAGCATATCTATTATTTTAGAAAAAAATAAGAAAATAAATTTATTTTACATAAAATCACATAATATCTCATTCAATTTCTTCTTTTCTAATTTGGGGTACTCTCCATCGTGACCTTTGGTCATTTGAGAAAGGAGTTTTATTTACTCGTTTTATTGTTTTTTCTAAGGAATCTAATTCTACTATGAAGAAAAGCTTAGTTGGATGTTGCATTTGGTGGGGATTTATTTCCAAGATTCACACCTCATACAACTATTTCCTTTGGAATTTCAATCTTTATTTATTTTATTCTTTGTTTTAAGTAAGGAAAATCTTATTGTTTTTTCTTACTATTTGTTTTTTTTTTACTTATCATCATTCTTTTTTTAAAAAACCTTTAGCATTTTTCTTCTCCCTAAAAATCACAGAGAGTAAGAAAGAGGCAGAAGGAAAATGATTGTATTTTTTATTTTGTGTTATTATCTTTTTCGTCTTGACCCTTGAGCTTTATTGTCTTTTTTCTATCTTTTTTAGTCTTGACCCTTGACCTTTATTATCTTCTCTAAAAGTAGAGAGAAAGGACGACGGATAAAGAAAATTTTATAAATATTACCGTTGTTGTTATTATTATTTAGGGTGGGCGGCAGCAATTTTATTTACTTATTTATTTATCATTTTCTTTTTTTTCCTTTCTTCCTTTTTCCCGTATTATTTTTTACTATTATTATGTTCTCATTTTTTCCTTTTCTTTTCAACCGTTAATACATCGACATTGTGGACTTTGTCACATTTTGAACATGTTTGACTTAACTTCTACTATAGAAGAATATCATGCACTTATTAGCCTACACATAGGAAATAAGCGTTATATTTATGATCGAAAATTTGACTCTACAACGGTCGCTATCAAAGTTTATGGGTGACATTCATGCATCTGAGATAAAAAACAAATGAAGACAACAGAATGGAGGAATTGTATTCCCATCATTTACTTCGTCAATATGGAAGAAGAGTTTGTTTCTCATCCTTGGAATAGATCAAGGAGTAAAGCTTGTTACCCTAATCATGGCAGAGACTTTCAGATCATTAATTCATTGTCGAATTCAAGGCAAAGGAAAATTATTCAGGTGTACTCCTATGCTTTTTATTTGGATTTATAGTATTCTAATAATTTTTGATATTCTCAGATAAAATTTTGTGGAATAAGGTAAGAAATACTATTAGAGGATTCAATTATGGCATTAGGATCCAAATATTCCAAAATTTGGAGTTTGGATGTAGTTTTTCATCCTTTTAAACGACAGTGGAAGTAGTTTGGGTGCCTACAATTCCCTTGACATATCATTGTGGGAAATTGACTTTTATCTCACTATTGAGTCAATTAGGAGCATTGCTTACTCGCATCTTTTGATACTACGTCAATTGTGGTCAAAACAATTCACCACAGTTGTATGTAGGCTAGAGAATTGAGACTTTCTCATGAGTTAGATTTGGAAAATAACAAAATTCATGAAGCAATTGAGACATCGAAATTCATATAGAAAATGAAGGGTTTGACATTTTGAGAGTACTACGGAAGAGTATGATAATTGGAGAGCATCTAGAGGTTAAAGTTAGTACTATGTTAGAGGTTAAAGTTAGTACTATGTTAGAGGTTAAAGTTAGTACTATGTTAGAGGTTAAAGTTAATGCTATGTTAGAATCCTTAGTTCCAAACATACTATCGAAAAAAAATCATGACAATAGAAAAAGAGATTTGAAGCGGTTAAGAGAAATAAATTGTGTTTTGTTAATAGAAAACAAGAAGCTTGGAGAATAAGTCAAGAGATTGGTCTAACAAGTGGTTAGTGCTAAAAGAGATTTAGACGAAGCAAAACGAAAACAATCAAAGCTAGAGAAGAATAATGATTCTTTGAACACCAAGGTAATCTAAATGAGAAAAAAGAATAAGAGATTATTGAGGAATATTGTTGACTTTCATGAAGAGACAATAGCTATAAAGTATGCATTACAGATTTGAAATAGGAAATAGATAGATTGAATGAGATTACTATAAAATTCCAAAACGCACTACATGAACAAATCACATCTCAAAAGATCGTTGTGGTAGTTGAGAGTTTACAACAATTAGCTAAAGAATGCAACTCCCAACTTATGGAAGTGGAAAGCAAAAACAAATTTCTTCAAGAAGTCAGTCAACAATTTCGAAGGTCAGTTGCTAATATGTCATAAGACAATGGAGGTCACAACAGATGACTACGCTCAATTAGAAGAAAAATATCAAGAAATGTTAGAATTCATGACATGGAGGGACGAGTACGACATAATGAGACACAAGTATGATGGTGCTAGAGGTTAGATGGAACAATAAGTTGATAAATTATGACAAATGGAGAGCATGACAAATCAATTCTTAGTGCAAGCTATGACACTTAGACATGCATTATACCTACACTCTACAACAATAGATATTTGTCTCGTTTTTTAGGATCTATAGGGCAATAGTTTAGGTGTCTTGGATGCTACTATTAGGTGTTGGAGTCATGTATTTTGCATTGTACTTTCACTTTAAAAGTAAATTAAGTCTGGTCTCTGTCATTTTACATTCATTTAATCCTTTTTTAAATAAAAATATTCTACTTCTTCCTCTTCTTTCTTATCTTCTCTCTGGGTGATTGAATCATTATTCTCTTTTTAAAAGATAAAAGATCAAAACTTGCAAAATAGCTTGAGGTTCACCTCTTCAACATCTTTATTAGACAATAAGAAAGGCTAAAATAGGATGAATAAACCAATGATCAGGTTTAAGCAGTTTGTCAAGACGTCGAAGGATTGAAAGATCAATTGACAAAGGTCCTATAACTGTTCACTTTTAAATGAAGAAAGAGTGCTGTGGGGTCTTATCACAAGTGGAAGTTGATCTGAACCAGCTACTAGAGGACATGTTTGCATACCCTTCGTGTTTTACTCTTCAAAGGTCGTCTAGTCCACGTATGGCAGATAGGACATATCCTACATCCTTTCTCACGCAAAATGCTAACTCGACCTCATAGTAGGCAACCCACATGAGTGATTCCATATCTACTCCAATTATAGGAAGTGATAAGAAAGTTTCAGAAGATCGGGGTAGTAGAAGAAATTAGAGTTTCTAGAAGAAAGATTGCACGCGGTTGAAGGTGTAGACATGTATGAGGGTGTTGACGCAACACAACTATGTTTGATATCAAATATGGTGATCCCTCCCAAATTCAAGATTCTAGATTTTGAGAAATACAATGGAACTATGTGCCCCAAAAGTCATCTAGTTATGTATTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTTTTTGTTCATGGTTTCCAAGACAGCTTAGTTGGTTTGGTTTCTCGCTGGTACAAGCAATTGGATGGTTTGTAAGTGCATAAATGGAAGGATTTCATCGATTCATTCTTGAAATAACATAAGTACAACATTGATATTACACTTAATCATCTGGATCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAGTATGCACAACGATGGAGAAAGTTAGCTGCACAAGGGCAACCTCCCCTGATCAACAAAGAATGTCATGCTCATAAATACTTTTCAGGCCTCATATTATGATAGAATGGTTGGAAGTGTCTCGACTAATTTCTCAAACATTGTAACCATTGTGGTGAGGATCAAATTTAGAGTGAAGAATGGAAGGATCACTGATCCTGCTTCAGAGACAAGAAGGATGATGACCCCATAGAAAAAAATTATTTGTTAACACTTTTTCCTCTTATAGCAGTGAGCAGTTCTAGGACCTTTGCCAATTGACCTTTCAATCTTCAATATCTTGAAAAATTGCTTGAACTTGATCATTGGTTTGTTCATCCATTATTCTAGTTTTTCTTCTTGTCCAATATGGATGATGAGAAGGTGAACCTTAAGCTATTTTGCAAGTTTTGATCTATCATGTTTTAAAAAAAGAATAATGATTCAATCAGCAAAAGAGAAAATAAGAAAGAAGAGGGATAGTAGAATACTTTTATTTCAAATAGGATTTAATGTATGTAAAATGACAGAGACCAGACTTAGTTTACCTTTAAAATGAAAAGCACATGCAAAATACACGACTCTAATACATAATGGTAGCATCCATGATGTTCAAGGTATTGTTTATGATTTCTAGAAAACGAGACAATTCTTTGTTGGTGTCGTGTGTGGGTATAATGCCTTGTCGGAGAGTCATAGTTTTCATTGAGAATTGTTTTGTCATCCTTGTCATTTGTCTTAATTTCTCAACTCATTGTTCCGTCTGACCTCTAGCACCATCATACTTGCGTCTTATTATATTGTACTCATGCCTCCATATTATGAAATATATAGACATTTATTGATATTTTTCTTTTAATCGACCGTAGTCATCTATTGTGACATTTATTGATTGTGACATATCAACAATTGACATTCCAAACTATTGATTGCTTATTGAAAGTTTTGTTTTGCTTTCTGCTCCCATAAGCTGGGACTTGTATTTTTTAACTGATTGTTGTAAATCCTCGATCACCACACCGTTCTTTTGAGATGTTGTGGCTTGTTCATGTAGTGTATTTTGGAATTCTATAGCAATTCCATTCAATCTTTCTATTTCTTGTTTTAAATATGTAATGCATACATTTTTAGCTGTCTCTTCATGGAAGTCACAATGTTCCTTAATAATCTTTTTTTTTTTCTCATTTGACTTGCCTTAGTGTTTATAGAATCGTTATTTTTTTCCAGTTCTGATTGCTTTCGTTTCGTCTCGTCCAAATCTCTTTTAGCACTAACAACTTACTAAACCATCACTTGACTTCTTCTCTCAACTTGTCATTCTCTATTGCCAAAACACAATTCATTTCTCTTAATTGCTTCAAATTTTTTTCTTTATTATCATGATTTTTCTTTAATACAATGCTTGGAACTAAGGATTCTGACATAGTACTAACTTCAATCTCATCTTTAGATGCTCTCCAATTATCATACTATTTTGTAGTACTTTCACAATGTCGCAAACTCTTGATTTTTCTTTACGAATTTTCATCTCTCAATTGCTTCATAAATTTTTTTATTTGCTAAGTCAGATTCATATGAGAATTTTTAATTCTCTAGCCCACATACAACTGACGTGAACTGTTTTAACCATGATTAGTACCAAAAGAGGAGACTAGGCGATCCCCCAATGGCTCTAGTGGGATAAAAGTCAATTTTTCACAATGGTATGTCAAAGGACTTGTAGGCATCCAATGAGCTTTTTGGAACATTGAAATCAAATTTTGGAACATTTGGATCCTAGTATGCACTATTGAATTCTCTATTAGTGTTTCTTGTATTATTCCATAGACTACTGAATTTTAGAGGATAACCAACATTATTAAGATACCTTAGATGATTAGAAATCCAAATAAAAAGTATAGATGCACATTTGAAGAATTTTCCTTTGCCTTGGATTTGACAATGATTGAGCAATATGAAAGTCTGCCATGATTGGGATAACGGGGTTTACGCCTCATTCTATTCCAACAAAAATCTTAATCACTTCTTCTGCATACCCTTTAATTTTGGGAAAAATAATTGTTTCGTAGATACATGACGCAACGATAGACAACAAACCCCTCTTCCCTGATAGACAACCACACACAAGATTGATGAGATAATTGATGGGAATATAATTTCTACCTTCTTTTATTTTCATTTGTTTCTTTATCTCATATGCATGAATGCCATCCATAAACTTTGATAGTGATCGTTGTAGAGTCAAACTTTCAATCAGACTAATAAGTGTATGTTATTCTTCTATAGTAGGAGTCAAGTCAAACAAGTTGAATGCTCCAATATAGGGTCCTAAAAATGTGACAAATTTTGCAATGTTGATGTATTAAGGTTGTGTATAAGACATCACCTAACCTATGCTTTTTAAAACTCTGCTCTATGCTTTGGCATTAAGCTTTGTTGTAAACCTTTTAACTCTTCCAGGTTATTGTTGACGAATTCCAGCTAACAAGGCTTTGGATGTGGAGAAAATTTCTTTGACCAAACTTTTATTGACTCTAGTTGAAACTGTTTCGACCGCTGAGATACATCCTCCTACGAGTCTTCATTAGGAATCAATTGGGCAAATACCTCAGACGCGAGAGCAGGACAAGGTATATCTAAGGATGAGATTAGATGTAAATATCGAATACGAGAAAGAAAATAATCAAATAATCCAATGGTTCAAACAAACTTTTTAACAAAATTCATATAGAAAAATAAGATTTTTTTTAATGTCTTATTTCAATACAAGTTAAATTCATTTAATTGATTACAATGTATCGAGAAAAAAAGATTCTTTAGAGGATCACGAATCATTACAACCTCTTTAAATATATCATAGTCTAGTCTTAGTCTTTGAATAAACAATTTATGAAATATAGTTTAATTTTGAACTTTGAATAAACCTAAAAAAATTTAACTTTAAATGAAAATTTTAAAAATAATTAAAAGAAATTTTAAGAAGGATTTCAAAATGACTTTGATTTAAGTTAAATTATTTTTTAAAACAAGCAAAATAAAATAATTATGTCGCTTTCCTAAAAGAAGATAATGGTAAAGGTTTGAAAAAAATAATGATAAGTAAAAAAGAGCAAATAATTAAAGAAAACAATAAGATTTTTTAATACTATTTTTCTCTACTTTTCTAAAAGGTGGCAAAAAAAAAAAATTAAGGATTGAGATCGGAGAGAAATCACTATTGCATGAGATGTTGATCACTGGAATAAAATTTTAAAATTTTTACAAAATAAAGAATAAATGAAAACTTACCATTTCGTAAGATTCTTTCTAAATAATTTTTTCTCTCCATCTAAATACCACAAATTAGAAAAATTCAATATGAGATGAGATATCATGTGATTTTGTGTAAAAT

mRNA sequence

CCGCAAAATCGGAGGAAAATGTTGAAGAAAATGATGGCCGCCTCTGCGGTGGCCCTCCGGAGTGGCACTCGGCCGTCTCTCATGTTCACTTGCCGCCATTCCACCTCCGCATCCTCCGCCGTCAACTCCTTCCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCACCAGAATGGCGGCTCCTCCAAAAGTGAGCCCTCCTTCTTCCTTTTCTATCATAGTAGGCGCATTAGACGGCAATGGACCGGTGCTTACTAAGAACTACGGGAAAGAAGAGATTAACATTTCGGTTATGCGATTGGCTAATATTGTTCGGGGAGGTGGTGGAGGCGACGACGATGATGAAATTAACCAGTTGTTTCTGCATGTGACTGTATCGAAGCTGGAGCAGAAGGATAATTTGCATTTTCTTTGTGGGTTGTATCCTGATGCCTTAGGTATTCATTCCGTTTCGATGAGACCGAAAGCCGAATCTTCGGGGTCGGGGTTTCTCGTTGTTCCGTCCAGCTATAATGGTCCTACATTCGAGAACAACACAACCCAATTGGTAATGAAATATTCTGATTTCTGGATAGATCTGGATGAGAAAATGCGAGATATGTTTCACAATTATATAGAAGAGCGAGGTGTGAATGAGTCCCTCTTTCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAAATCTTTTGCGGTGGTTCAGATCAGTTGGCACATTCATCTACGAGCCCAAGAATGGTAAAAAGGATTGATAGTTAACTGGATAGAAAAACTGTTAGTCTGGATGCTTTGATTTTGTGGAATTCAGGGTTCCATCTTCAAAATTGGTTATAGGTGGTGTATCAGGTAAATGGTCCATTTCACTTTAGTTATACAATTTTGTAAGCCCTTTACGTGATGATATATCCCTTCTTGATAAGCCATGGTGTTGTTTTTCAAATGTGATTAGATTAACGTTGAATTTGAGCAACCAACGTTGCTTTGTTTGAAACTTTATTTCTCTTATGACCCATGGTTTATGTGCCGCTAATGTAGCGGCTTGTCGAGCATTTGACAAACTCACACCATCCATGTCAAATGGGATTTGTCTCGTGGACACACAAGCAATCCAACCTGTTATTGTTGACGAATTCCAGCTAACAAGGCTTTGGATGTGGAGAAAATTTCTTTGACCAAACTTTTATTGACTCTAGTTGAAACTGTTTCGACCGCTGAGATACATCCTCCTACGAGTCTTCATTAGGAATCAATTGGGCAAATACCTCAGACGCGAGAGCAGGACAAGGTATATCTAAGGATGAGATTAGATGTAAATATCGAATACGAGAAAGAAAATAATCAAATAATCCAATGGTTCAAACAAACTTTTTAACAAAATTCATATAGAAAAATAAGATTTTTTTTAATGTCTTATTTCAATACAAGTTAAATTCATTTAATTGATTACAATGTATCGAGAAAAAAAGATTCTTTAGAGGATCACGAATCATTACAACCTCTTTAAATATATCATAGTCTAGTCTTAGTCTTTGAATAAACAATTTATGAAATATAGTTTAATTTTGAACTTTGAATAAACCTAAAAAAATTTAACTTTAAATGAAAATTTTAAAAATAATTAAAAGAAATTTTAAGAAGGATTTCAAAATGACTTTGATTTAAGTTAAATTATTTTTTAAAACAAGCAAAATAAAATAATTATGTCGCTTTCCTAAAAGAAGATAATGGTAAAGGTTTGAAAAAAATAATGATAAGTAAAAAAGAGCAAATAATTAAAGAAAACAATAAGATTTTTTAATACTATTTTTCTCTACTTTTCTAAAAGGTGGCAAAAAAAAAAAATTAAGGATTGAGATCGGAGAGAAATCACTATTGCATGAGATGTTGATCACTGGAATAAAATTTTAAAATTTTTACAAAATAAAGAATAAATGAAAACTTACCATTTCGTAAGATTCTTTCTAAATAATTTTTTCTCTCCATCTAAATACCACAAATTAGAAAAATTCAATATGAGATGAGATATCATGTGATTTTGTGTAAAAT

Coding sequence (CDS)

ATGTTGAAGAAAATGATGGCCGCCTCTGCGGTGGCCCTCCGGAGTGGCACTCGGCCGTCTCTCATGTTCACTTGCCGCCATTCCACCTCCGCATCCTCCGCCGTCAACTCCTTCCTCCTCCGCTCCCTCAAAGAACACTATCTCGAGATCACCAGAATGGCGGCTCCTCCAAAAGTGAGCCCTCCTTCTTCCTTTTCTATCATAGTAGGCGCATTAGACGGCAATGGACCGGTGCTTACTAAGAACTACGGGAAAGAAGAGATTAACATTTCGGTTATGCGATTGGCTAATATTGTTCGGGGAGGTGGTGGAGGCGACGACGATGATGAAATTAACCAGTTGTTTCTGCATGTGACTGTATCGAAGCTGGAGCAGAAGGATAATTTGCATTTTCTTTGTGGGTTGTATCCTGATGCCTTAGGTATTCATTCCGTTTCGATGAGACCGAAAGCCGAATCTTCGGGGTCGGGGTTTCTCGTTGTTCCGTCCAGCTATAATGGTCCTACATTCGAGAACAACACAACCCAATTGGTAATGAAATATTCTGATTTCTGGATAGATCTGGATGAGAAAATGCGAGATATGTTTCACAATTATATAGAAGAGCGAGGTGTGAATGAGTCCCTCTTTCCATTTCTTCAAGCATGGCTTTATGTGAAAGAACATCGAAATCTTTTGCGGTGGTTCAGATCAGTTGGCACATTCATCTACGAGCCCAAGAATGGTAAAAAGGATTGA

Protein sequence

MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVSPPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRGGGGGDDDDEINQLFLHVTVSKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMKYSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPKNGKKD

Homology

[Close]

BLAST of CsGy6G004100.1 vs. NCBI nr
Match: XP_004140916.1 (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus] >KGN46057.1 hypothetical protein Csa_6G046350 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 5.0e-116
Identity = 230/245 (93.88%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS
Sbjct: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120
           PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV
Sbjct: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120

Query: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMK 180
           SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFE         
Sbjct: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFE--------- 180

Query: 181 YSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 240
                 DLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK
Sbjct: 181 ------DLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 230

Query: 241 NGKKD 246
           NGKKD
Sbjct: 241 NGKKD 230

[Close]

BLAST of CsGy6G004100.1 vs. NCBI nr
Match: XP_008456624.1 (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo])

HSP 1 Score: 401.0 bits (1029), Expect = 2.9e-108
Identity = 213/245 (86.94%), Postives = 222/245 (90.61%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           ML K+MAA+AVALRSG+RPSLM TCRHSTSASSAVNSFLLRSLKEHYLEITRM APPKVS
Sbjct: 1   MLNKLMAATAVALRSGSRPSLMVTCRHSTSASSAVNSFLLRSLKEHYLEITRMPAPPKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120
           PPSSFSII GALDG+GPVLTKNYGKEE+NISVMRL+NIVR XXXXXXXXXINQLFLHV+V
Sbjct: 61  PPSSFSIITGALDGHGPVLTKNYGKEEVNISVMRLSNIVRGXXXXXXXXXINQLFLHVSV 120

Query: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMK 180
           SK EQKD LHFLCGLYPDALGIHSVSMRPK ESSGSGFL+VPSSYNGPTFE         
Sbjct: 121 SKPEQKDTLHFLCGLYPDALGIHSVSMRPKGESSGSGFLLVPSSYNGPTFE--------- 180

Query: 181 YSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 240
                 DLDEKMRDMFHNYI+ERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK
Sbjct: 181 ------DLDEKMRDMFHNYIDERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 230

Query: 241 NGKKD 246
           NGKKD
Sbjct: 241 NGKKD 230

[Close]

BLAST of CsGy6G004100.1 vs. NCBI nr
Match: XP_022938797.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata])

HSP 1 Score: 354.4 bits (908), Expect = 3.2e-94
Identity = 183/245 (74.69%), Postives = 199/245 (81.22%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           MLKK+ A +AVALR   RPSLM TCRHSTS S+AVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120
           PPSSFSII GALDGNGPVLT++YG EEIN+SVMRLANIV           INQLFLH+TV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMK 180
           SK EQ+++LHFLCGLYPDALGIHSVSMRPKAES  SGFLVVPS YNGP FE         
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAES--SGFLVVPSGYNGPVFE--------- 180

Query: 181 YSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 240
                 DLDEKMRD+FHNYIEERG+NESLFPFLQAWLYVKEHRNL+RWFRSVG+FI E K
Sbjct: 181 ------DLDEKMRDVFHNYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINERK 228

Query: 241 NGKKD 246
           N K+D
Sbjct: 241 NAKED 228

[Close]

BLAST of CsGy6G004100.1 vs. NCBI nr
Match: XP_023549717.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.7 bits (901), Expect = 2.1e-93
Identity = 182/245 (74.29%), Postives = 197/245 (80.41%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           MLKK+ A +AVALR   RPSLM TCR STS S+AVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120
           PPSSFSII GALDGNGPVLT++YG EEIN+SVMRLANIV           INQLFLH+TV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHLTV 120

Query: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMK 180
           SK EQ+++LHFLCGLYPDALGIHSVSMRPKAES  SGFLVVPS YNGP FE         
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAES--SGFLVVPSGYNGPVFE--------- 180

Query: 181 YSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 240
                 DLDEKMRD+ HNYIEERG+NESLFPFLQAWLYVKEHRNL+RWFRSVG+FI EPK
Sbjct: 181 ------DLDEKMRDVLHNYIEERGINESLFPFLQAWLYVKEHRNLMRWFRSVGSFINEPK 228

Query: 241 NGKKD 246
           N K D
Sbjct: 241 NAKVD 228

[Close]

BLAST of CsGy6G004100.1 vs. NCBI nr
Match: XP_022992760.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima])

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 181/245 (73.88%), Postives = 198/245 (80.82%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           MLKK+ A +AVALR   RPSLM TCRHST+ S+AVNS LLRSLKEHYLEI+RM  PPKVS
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120
           PPSSFSII GALDGNGPVLT++YG EEIN+SVMRLANIV           INQLFLHVTV
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDEINQLFLHVTV 120

Query: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMK 180
           SK EQ+++LHFLCGLYPDALGIHSVSMRPKAES  SGFLVVPS YNGP FE         
Sbjct: 121 SKPEQRESLHFLCGLYPDALGIHSVSMRPKAES--SGFLVVPSGYNGPVFE--------- 180

Query: 181 YSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 240
                 DLDEKMRD+ HNYIEERG+N+SLF FLQAWLYVKEHRNL+RWFRSVG+FI EPK
Sbjct: 181 ------DLDEKMRDVLHNYIEERGINQSLFSFLQAWLYVKEHRNLMRWFRSVGSFINEPK 228

Query: 241 NGKKD 246
           N K+D
Sbjct: 241 NAKED 228

[Close]

BLAST of CsGy6G004100.1 vs. TAIR10
Match: AT4G32605.1 (Mitochondrial glycoprotein family protein)

HSP 1 Score: 245.7 bits (626), Expect = 2.9e-65
Identity = 129/212 (60.85%), Postives = 154/212 (72.64%), Query Frame = 0


Query: 28  STSASSAVNSFLLRSLKEHYLEITRMAAPPKVSPPSSFSIIVGALDGN-GPVLTKNYGKE 87
           S + S+AV+S LLRSLKEHYLE+++M  PPKVSPPS F I+ G+L+G+ G VL K+ G E
Sbjct: 29  SANVSAAVDSMLLRSLKEHYLEVSKMTPPPKVSPPSPFEIVKGSLEGSTGAVLKKSVGNE 88

Query: 88  EINISVMRLANIVRXXXXXXXXXXINQLFLHVTVSKLEQKDNLHFLCGLYPDALGIHSVS 147
           EIN+ VMRLA+             INQLFLHV VSK  Q D+LHFLCGLYPDALGIHSVS
Sbjct: 89  EINLFVMRLAH----GGDEEDDGGINQLFLHVAVSKPNQPDSLHFLCGLYPDALGIHSVS 148

Query: 148 MRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMKYSDFWIDLDEKMRDMFHNYIEERGVN 207
           MRPK E+        P+ Y GP+FE               +LDEKMRD+FH ++EERGVN
Sbjct: 149 MRPKLEALEMS--DDPTQYTGPSFE---------------ELDEKMRDVFHGFLEERGVN 208

Query: 208 ESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYE 239
           ESLFPFLQAWLYVK+HRNLLRWF+SVGTF++E
Sbjct: 209 ESLFPFLQAWLYVKDHRNLLRWFKSVGTFVHE 219

[Close]

BLAST of CsGy6G004100.1 vs. TAIR10
Match: AT1G80720.1 (Mitochondrial glycoprotein family protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-11
Identity = 49/184 (26.63%), Postives = 83/184 (45.11%), Query Frame = 0


Query: 57  PKVSPPSSFS-IIVGALDGNGPV-LTKNYG-KEEINI-SVMRLANIVRXXXXXXXXXXIN 116
           P + PP+SF    V    G   + L +N+G KE+I I + M   ++            I 
Sbjct: 26  PPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDIKIEATMFDRSVPTSKSTKTEPEYIL 85

Query: 117 QLFLHVTVSKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFEN 176
            +   V +SK    + L  +C  +PD + I  + +R        G    PSSY GP FE 
Sbjct: 86  HITFIVNISKAGATEALEIMCSAWPDTIEISKLCIR-------RGINTSPSSYGGPEFE- 145

Query: 177 NTTQLVMKYSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSV 236
                         +LD++++D  + ++EERG+++ L  FL  ++  K     +RW  SV
Sbjct: 146 --------------ELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWMESV 187

[Close]

BLAST of CsGy6G004100.1 vs. TAIR10
Match: AT3G55605.1 (Mitochondrial glycoprotein family protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 38/123 (30.89%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 116 LHVTVSKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTT 175
           L VTV+K +   +L F C  +PD + I  +S+    +SS         +Y+GP F+    
Sbjct: 157 LVVTVTK-KSGLSLEFSCTAFPDEIVIDGLSVNRPDDSSEEQL-----TYDGPDFQ---- 216

Query: 176 QLVMKYSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTF 235
                      +LDE MR  FH ++E RG+  S   FL  ++  K+ R  L W + + TF
Sbjct: 217 -----------ELDENMRKSFHKFLETRGIKASATDFLYEYMMKKDSREYLLWLKKLKTF 258

Query: 236 IYE 239
           + E
Sbjct: 277 VQE 258

[Close]

BLAST of CsGy6G004100.1 vs. TAIR10
Match: AT5G05990.1 (Mitochondrial glycoprotein family protein)

HSP 1 Score: 55.5 bits (132), Expect = 5.5e-08
Identity = 37/121 (30.58%), Postives = 56/121 (46.28%), Query Frame = 0


Query: 116 LHVTVSKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTT 175
           L VT+SK +   +L F C  +PD + I  + +    + S         +Y GP+F     
Sbjct: 158 LLVTLSK-KTGPSLEFRCTAFPDRIAIKDMWVTFPDDPSKDEL-----AYEGPSFR---- 217

Query: 176 QLVMKYSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTF 235
                       LDEK+R  FH YIE RG+  S+  FL  ++  K+ R  L W +S+  F
Sbjct: 218 -----------VLDEKLRKAFHRYIEIRGIKPSMINFLHEYMINKDSREHLLWLKSLKNF 257

Query: 236 I 237
           +
Sbjct: 278 V 257

[Close]

BLAST of CsGy6G004100.1 vs. TAIR10
Match: AT1G15870.1 (Mitochondrial glycoprotein family protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 29/125 (23.20%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 116 LHVT----VSKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFE 175
           LH+T    +SK    + L  +C  +PD + I    +R  +++S       P++Y GP F+
Sbjct: 138 LHITFIVNISK-GDGETLEIMCSAWPDTIQITKFFVRKSSQNS-------PNAYIGPEFQ 197

Query: 176 NNTTQLVMKYSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRS 235
                          +++++++D  + ++EERG+++ L  FL  ++  K+    +RW  +
Sbjct: 198 ---------------EMEDELQDSVYRFLEERGISDDLAEFLHQYMKNKDKAEYIRWMET 239

Query: 236 VGTFI 237
           V +++
Sbjct: 258 VKSYV 239

[Close]

BLAST of CsGy6G004100.1 vs. Swiss-Prot
Match: sp|O94675|MAM33_SCHPO (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-04
Identity = 19/50 (38.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 187 DLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFI 237
           +LD +++D+FH+Y+EER ++ESL  F+ ++   KE +  + W  SV  F+
Sbjct: 219 ELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQFL 268

[Close]

BLAST of CsGy6G004100.1 vs. TrEMBL
Match: tr|A0A0A0KCG3|A0A0A0KCG3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 3.3e-116
Identity = 230/245 (93.88%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS
Sbjct: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120
           PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV
Sbjct: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120

Query: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMK 180
           SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFE         
Sbjct: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFE--------- 180

Query: 181 YSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 240
                 DLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK
Sbjct: 181 ------DLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 230

Query: 241 NGKKD 246
           NGKKD
Sbjct: 241 NGKKD 230

[Close]

BLAST of CsGy6G004100.1 vs. TrEMBL
Match: tr|A0A1S3C3N7|A0A1S3C3N7_CUCME (uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496527 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 2.0e-108
Identity = 213/245 (86.94%), Postives = 222/245 (90.61%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           ML K+MAA+AVALRSG+RPSLM TCRHSTSASSAVNSFLLRSLKEHYLEITRM APPKVS
Sbjct: 1   MLNKLMAATAVALRSGSRPSLMVTCRHSTSASSAVNSFLLRSLKEHYLEITRMPAPPKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120
           PPSSFSII GALDG+GPVLTKNYGKEE+NISVMRL+NIVR XXXXXXXXXINQLFLHV+V
Sbjct: 61  PPSSFSIITGALDGHGPVLTKNYGKEEVNISVMRLSNIVRGXXXXXXXXXINQLFLHVSV 120

Query: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMK 180
           SK EQKD LHFLCGLYPDALGIHSVSMRPK ESSGSGFL+VPSSYNGPTFE         
Sbjct: 121 SKPEQKDTLHFLCGLYPDALGIHSVSMRPKGESSGSGFLLVPSSYNGPTFE--------- 180

Query: 181 YSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 240
                 DLDEKMRDMFHNYI+ERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK
Sbjct: 181 ------DLDEKMRDMFHNYIDERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 230

Query: 241 NGKKD 246
           NGKKD
Sbjct: 241 NGKKD 230

[Close]

BLAST of CsGy6G004100.1 vs. TrEMBL
Match: tr|A0A2I4DIV9|A0A2I4DIV9_9ROSI (uncharacterized protein At2g39795, mitochondrial OS=Juglans regia OX=51240 GN=LOC108980574 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.0e-72
Identity = 150/245 (61.22%), Postives = 181/245 (73.88%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           M +K++AA+  ++     P     CRHST+ SSAVNS LLRSLK+HYLE+++M+ P KVS
Sbjct: 1   MWRKVLAAATGSVLH--HPWRTIACRHSTNVSSAVNSMLLRSLKDHYLEVSKMSPPTKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYG-KEEINISVMRLANIV-RXXXXXXXXXXINQLFLHV 120
           PPS F+I+ GALDG+GPVL ++YG  EEI+ISVMRLANI+            INQLFLHV
Sbjct: 61  PPSPFTIVKGALDGSGPVLKRSYGDHEEISISVMRLANIIPGGAGEDDGDDSINQLFLHV 120

Query: 121 TVSKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLV 180
            VSK  Q+D+LH LCGLYPDALGIHS+SMRPKAES  SGFL++PS Y GP FE       
Sbjct: 121 DVSKPGQQDSLHLLCGLYPDALGIHSISMRPKAES--SGFLILPSQYTGPVFE------- 180

Query: 181 MKYSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYE 240
                   DLDE+MRD  H+YIEERG+NE LFPFLQAWLYVK+HRNL+RWF+SVGTFI E
Sbjct: 181 --------DLDERMRDALHSYIEERGINEDLFPFLQAWLYVKDHRNLMRWFKSVGTFINE 226

Query: 241 PKNGK 244
            K+ K
Sbjct: 241 NKSAK 226

[Close]

BLAST of CsGy6G004100.1 vs. TrEMBL
Match: tr|A0A0V0HIJ0|A0A0V0HIJ0_SOLCH (Putative mitochondrial acidic protein MAM33-like OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.1e-71
Identity = 139/242 (57.44%), Postives = 175/242 (72.31%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           ML+K +A +  AL+   +P     CR S+  SSAVNS +LRSLK+HYLE+++M  PPKVS
Sbjct: 1   MLRKALAFAGSALQQQHQPWRTIACRRSSGVSSAVNSIILRSLKDHYLEVSKMTPPPKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120
           PPS F+++ GALD  GPVL + +G EEI+ISVMRLANI+           INQLFLHV +
Sbjct: 61  PPSPFTVVKGALDHGGPVLRRTHGNEEISISVMRLANIIAGGIGDEEEDGINQLFLHVDI 120

Query: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMK 180
           SK  QK++LHFLCGLYPDALGIHSVS+R K ES  SGFL VP++Y GP F+         
Sbjct: 121 SKPGQKESLHFLCGLYPDALGIHSVSLRSKTES--SGFLAVPTNYGGPVFQ--------- 180

Query: 181 YSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 240
                 D+DEKMRD  H++IEERG+NESLFPFLQAWLYVK+HRNL+RWF++VG+ + + K
Sbjct: 181 ------DIDEKMRDALHSFIEERGINESLFPFLQAWLYVKDHRNLMRWFKTVGSLVNDRK 225

Query: 241 NG 243
            G
Sbjct: 241 QG 225

[Close]

BLAST of CsGy6G004100.1 vs. TrEMBL
Match: tr|M0ZKB7|M0ZKB7_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102595664 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.1e-71
Identity = 139/242 (57.44%), Postives = 175/242 (72.31%), Query Frame = 0


Query: 1   MLKKMMAASAVALRSGTRPSLMFTCRHSTSASSAVNSFLLRSLKEHYLEITRMAAPPKVS 60
           ML+K +A +  AL+   +P     CR S+  SSAVNS +LRSLK+HYLE+++M  PPKVS
Sbjct: 1   MLRKALAFAGSALQQQHQPWRTIACRRSSGVSSAVNSIILRSLKDHYLEVSKMTPPPKVS 60

Query: 61  PPSSFSIIVGALDGNGPVLTKNYGKEEINISVMRLANIVRXXXXXXXXXXINQLFLHVTV 120
           PPS F+++ GALD  GPVL + +G EEI+ISVMRLANI+           INQLFLHV +
Sbjct: 61  PPSPFTVVKGALDHGGPVLRRTHGNEEISISVMRLANIIAGGIGDEEEDGINQLFLHVDI 120

Query: 121 SKLEQKDNLHFLCGLYPDALGIHSVSMRPKAESSGSGFLVVPSSYNGPTFENNTTQLVMK 180
           SK  QK++LHFLCGLYPDALGIHSVS+R K ES  SGFL VP++Y GP F+         
Sbjct: 121 SKPGQKESLHFLCGLYPDALGIHSVSLRSKTES--SGFLAVPTNYGGPVFQ--------- 180

Query: 181 YSDFWIDLDEKMRDMFHNYIEERGVNESLFPFLQAWLYVKEHRNLLRWFRSVGTFIYEPK 240
                 D+DEKMRD  H++IEERG+NESLFPFLQAWLYVK+HRNL+RWF++VG+ + + K
Sbjct: 181 ------DIDEKMRDALHSFIEERGINESLFPFLQAWLYVKDHRNLMRWFKTVGSLVNDRK 225

Query: 241 NG 243
            G
Sbjct: 241 QG 225

The following BLAST results are available for this feature:

BLAST of CsGy6G004100.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140916.1	5.0e-116	93.88	PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus] >K...	[more]
XP_008456624.1	2.9e-108	86.94	PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo]	[more]
XP_022938797.1	3.2e-94	74.69	uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata]	[more]
XP_023549717.1	2.1e-93	74.29	uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022992760.1	2.7e-93	73.88	uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima]	[more]

BLAST of CsGy6G004100.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32605.1	2.9e-65	60.85	Mitochondrial glycoprotein family protein	[more]
AT1G80720.1	2.4e-11	26.63	Mitochondrial glycoprotein family protein	[more]
AT3G55605.1	1.7e-09	30.89	Mitochondrial glycoprotein family protein	[more]
AT5G05990.1	5.5e-08	30.58	Mitochondrial glycoprotein family protein	[more]
AT1G15870.1	1.2e-07	23.20	Mitochondrial glycoprotein family protein	[more]

BLAST of CsGy6G004100.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O94675\|MAM33_SCHPO	2.1e-04	38.00	Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of CsGy6G004100.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCG3\|A0A0A0KCG3_CUCSA	3.3e-116	93.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046350 PE=4 SV=1	[more]
tr\|A0A1S3C3N7\|A0A1S3C3N7_CUCME	2.0e-108	86.94	uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A2I4DIV9\|A0A2I4DIV9_9ROSI	1.0e-72	61.22	uncharacterized protein At2g39795, mitochondrial OS=Juglans regia OX=51240 GN=LO...	[more]
tr\|A0A0V0HIJ0\|A0A0V0HIJ0_SOLCH	1.1e-71	57.44	Putative mitochondrial acidic protein MAM33-like OS=Solanum chacoense OX=4108 PE...	[more]
tr\|M0ZKB7\|M0ZKB7_SOLTU	1.1e-71	57.44	Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102595664 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005759	mitochondrial matrix

Vocabulary: **INTERPRO**
Term	Definition
IPR003428	MAM33
IPR036561	MAM33_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy6G004100	CsGy6G004100	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy6G004100.1	CsGy6G004100.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G004100.1.five_prime_UTR.1	CsGy6G004100.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G004100.1.exon.5	CsGy6G004100.1.exon.5	exon
CsGy6G004100.1.exon.4	CsGy6G004100.1.exon.4	exon
CsGy6G004100.1.exon.3	CsGy6G004100.1.exon.3	exon
CsGy6G004100.1.exon.2	CsGy6G004100.1.exon.2	exon
CsGy6G004100.1.exon.1	CsGy6G004100.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G004100.1.CDS.4	CsGy6G004100.1.CDS.4	CDS
CsGy6G004100.1.CDS.3	CsGy6G004100.1.CDS.3	CDS
CsGy6G004100.1.CDS.2	CsGy6G004100.1.CDS.2	CDS
CsGy6G004100.1.CDS.1	CsGy6G004100.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G004100.1.three_prime_UTR.2	CsGy6G004100.1.three_prime_UTR.2	three_prime_UTR
CsGy6G004100.1.three_prime_UTR.1	CsGy6G004100.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036561	Mitochondrial glycoprotein superfamily	GENE3D	G3DSA:3.10.280.10		coord: 34..236 e-value: 1.4E-20 score: 75.9
IPR036561	Mitochondrial glycoprotein superfamily	SUPERFAMILY	SSF54529	Mitochondrial glycoprotein MAM33-like	coord: 41..236
IPR003428	Mitochondrial glycoprotein	PFAM	PF02330	MAM33	coord: 78..236 e-value: 3.8E-16 score: 59.6
None	No IPR available	PANTHER	PTHR31365:SF2	SUBFAMILY NOT NAMED	coord: 1..240
None	No IPR available	PANTHER	PTHR31365	FAMILY NOT NAMED	coord: 1..240