CsGy5G010390.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy5G010390.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr5 : 10628718 .. 10632178 (-)
Sequence length729
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAGTGTGCTTACCTTGATCAGACTCTCCTCCTCAACACTTCAAAATTCCCCTCCTCCTCCTCATGTCAATCATCCCTCTCCTCCTCCTCTTACCCAACATCCTTGGGTGACGTGTGATTGCAGCCAACATGTAAGCCGCTGATAACGTGTATAAATATCGTTATTATAATCTCTTTTACTAGAATAATGAGATCAAAACACATAAGAAGAGGATGAAAACGCGTGTCTTATGAGTTGTAAACACATAAGTATTTATAAATACGTCTTACATAAGCATTATGCATGTTTTATGTGATTGTCATGTCTAAACGCAAGATGAGTAGAAAGAAAGAAACTAGTTAATCGAAGGGGACATCTCGCGCAAATGCTACATGATGGGAATTCATTTGGAGATTAACATCTCCAGACGAGAAACCATGTCATCTTGAGAGGAAAGTTCACTAGAGGACAAAAATGGTAGTTGGAATTGATGTGACTTCGTAAGGCTGCAATCGACGCTAACAATCTCAGAAGAATAAAAGTTTCCCATTGAAAGCTGCCTATAAAAAGACTTCATCCCCACCAAGCAAAGTAAGCTTGTATAGGCTAGAAGAAAGGTTTGAATGGACCATAAAAGAGAGTCTAGATGAACCATAAGTGTAAAGAGTTTTTTTTTTCTTCTTCTTCTTCGATCATGCTCTAAGTGAGAGCTTAGAGTCTGAGTGATAGAGAACCTTGTACCCATTTTCCCTAACTTGTAACAACTATCATTCTCTTTTTACTTTCCACTTTTGTATTTCTATGTAATATATGTGTTCATATTGTACAATGGCCTAAAGCCTACATTTTGTGATATATTGCATTATTATACACTTTCAATCCATCATGTCTTCACTCTTCTTCATCCAATGTGTTATTTGTAATTTAGATGTGTGCTAAGTTCTTGATAAGAATTTTTGCTTATAAGTCTTATCGCGTTAGTCGAGCTATTCACACAACCTAGCGAGCGTAAGTCGTCAACTATCCGAGAGGGAAAGTAGCAAGGACCTAACTAACGCAAGATCATTTCTAGCATTTGTATCCTAGTAGGAGAACAAGTGTGGACGTGGACACTAAAAGGTTGTTGTCCTTAATCACAAAATCCTACACGATTTATAAGTGATCTCTTCTAGATATATCTCAACACCTAATCATGCTTAGTCATATGGATCCTAGAAAGCAATTATGTGTGGTGTATAATGACTTCGAGAGAAGCAAGCCTTAATCAAAAGTATGGTTTAGTAAGTTATATTGCATCAAAGTTATCGCCCTACTTAATTGCATGATAATGCATAGACATCTATTCCTTCATTTCTTTAGTACTAGTCAGTTTGTATTACCATTTCGCTATCATATTTCCTCTTTACAGACTCTCGAAGCCTAGTTTAGTACTTTAGCTTATTCTAACAATTCTTACATTTGTTATTCTTTAATTCTTTTATACCGTCTAGATAATAGATGATAAGTAATTCCTACATCTAATGTCTTGAATCAACTCCATGTGTTCGAACCTGGGTCATCCAAGTAAATCTACTGTTTTGCTTGCACTTGGACAAGAAGTAGGAAAACTTATACTGAACAAGGACTCAGTAACTATGCAATAAAGAGGTACGTAGTGACTACTTCGCATGCAGTGATCAAGACTAATGACTTAACCCGTATAATTAATTGTGTAATTAACCATCCCTGAGTCTGAGCCAAACTCAACACAACAGAGTTTGAAACCAACAACCAATCACATCAAAGGGAGATTAGATCGGATGGAGGATTCTTTACAACGAATGGAGTCGTCTATGTTGTTCGTGTTAGTCAAGTTATCGATCATAAGGGAGCTTCTAATGGTATTGGTTAAGGTACTATTATTATTCACGTGGAACATTTTATTGTTTTTGTCTTAACTATGTATTAGTCCTTACTTATGTTTCTACTGCTTCCTTAATAAGGTAAGGTAGTTGACTCTCAACCATACTATGGTGGTGGTGAAGGTTTATCTTTTAACACACTAGAGAGTCAGACTTTGGTTGGAGACGCATTCGTGGATGTTTTCACTTCAACCATAGATGACAAACTCGTTGATGAGGAGACGAGAACATCCGTCAGTGATAACCCCAAAGATGGTATCATACCCATTGACGTACCATCGAAGGGTGAGGATATGCCACCATTGCCGCCCCAACCATTGCCTCCCCAACCCTTGCTAGAGTCAAAGGACGAGGTAAGTGGTTTCAAACTTTGCATTTCTTTATATGGTGATTTTAGCAATAATAGAACTAACCAACAAACTGAATTATGAATTATACAGCCTTTAGTTTTTTCGGATGTTGTACCTAAGAAAGGGATAACAAAGAAGACAGGTATACCATAAGAATTGCGGTCACCATTTTTTGAACACGGACAAGGGGCTAAGAGAAGAAAGAGGGTGCACCCTATAATATAGTATGCAATATCCTCGTGAAGTCCAATATGCAATTCTTGGTATACCTCGTGGAACCTCAGAGAGCTACAGAGTTGTGGAAGACAGTTAGATCCTCGAGGGTGTTTCCGTGATTATGAACCTCCTAACTCCACAGACATTCATGGATGACGACGTATATATGTACTTCAAAATTGGTACATTTTCCATTATGTATGTCATCATCTGACACTAATTACTTGCTTCTCTCTGTTTGCAGACGATGAACACATTTTTCCTATTCACCTAGAAGAAGTTACAGGTCAATGACGATCCCTCAATATGTTTAAACAACTTTTGGTTGAATTTTTATTCTCAACTTGTTAATAATTTGTGTTTCGGTTCACCCTATGTTGTAGAATTTCTTAAGTCATAACCCATGTCTATACAAGGAGATTGAGAGGGACACTCACCTTGTTGACGTTCAGTACACCTGAGTTAAAGATGCTACTATATTGAAATATGTGATGAACGAGTTACAAAATTATGACAAGGCATGGATGGACATGGACTTCATATACCTGCCTTAAGACTCTATCACGAGAAATAAGCACATGGAATGTCTATTCAAAACCAAAACAAAGAAGTTTAAGTCAACCAGCAAGGTCAGCTACAACTTCACAGTTTGGACAATAACATATAGCTAGCACACTAGGAAACCTTTGTGAAATAAATATGGAAGATATCATTGGGGACAATGTTTGGTTGAAGCAAATATTTGTTATCCGTGCAAGCAACTTGGACATTTTAAAAGGAATTTTCCTCAATTAAAGTTTGATTTGCAAACGGATTCACAAGTTCAATCACAGACTGTTAATCAACTAAAAGCAATAACAGATGGAGGAGAAGGAACGAGCGATGTCAAGCAAAAAGGAGTTGTGGGTAGACCACAACAACAAGGAAAGATGTATGCTCTAGGTCAACGGAAAGTGGAAGAGACACCGAACACATTACTGGTAAGTTTTTTATTTGAGTATTTTTTTTAA

mRNA sequence

ATGATGAGTGTGCTTACCTTGATCAGACTCTCCTCCTCAACACTTCAAAATTCCCCTCCTCCTCCTCATGTAGTTGACTCTCAACCATACTATGGTGGTGGTGAAGGTTTATCTTTTAACACACTAGAGAGTCAGACTTTGGTTGGAGACGCATTCGTGGATGTTTTCACTTCAACCATAGATGACAAACTCGTTGATGAGGAGACGAGAACATCCGTCAGTGATAACCCCAAAGATGGTATCATACCCATTGACGTACCATCGAAGGGTGAGGATATGCCACCATTGCCGCCCCAACCATTGCCTCCCCAACCCTTGCTAGAGTCAAAGGACGAGCCTTTAGTTTTTTCGGATGTTGTACCTAAGAAAGGGATAACAAAGAAGACAGAGAAGAAAGAGGGTGCACCCTATAATATAGTATGCAATATCCTCGTGAAGTCCAATATGCAATTCTTGGTATACCTCGTGGAACCTCAGAGAGCTACAGAGTTGTGGAAGACAGTTAGATCCTCGAGGTTTGATTTGCAAACGGATTCACAAGTTCAATCACAGACTGTTAATCAACTAAAAGCAATAACAGATGGAGGAGAAGGAACGAGCGATGTCAAGCAAAAAGGAGTTGTGGGTAGACCACAACAACAAGGAAAGATGTATGCTCTAGGTCAACGGAAAGTGGAAGAGACACCGAACACATTACTGGTAAGTTTTTTATTTGAGTATTTTTTTTAA

Coding sequence (CDS)

ATGATGAGTGTGCTTACCTTGATCAGACTCTCCTCCTCAACACTTCAAAATTCCCCTCCTCCTCCTCATGTAGTTGACTCTCAACCATACTATGGTGGTGGTGAAGGTTTATCTTTTAACACACTAGAGAGTCAGACTTTGGTTGGAGACGCATTCGTGGATGTTTTCACTTCAACCATAGATGACAAACTCGTTGATGAGGAGACGAGAACATCCGTCAGTGATAACCCCAAAGATGGTATCATACCCATTGACGTACCATCGAAGGGTGAGGATATGCCACCATTGCCGCCCCAACCATTGCCTCCCCAACCCTTGCTAGAGTCAAAGGACGAGCCTTTAGTTTTTTCGGATGTTGTACCTAAGAAAGGGATAACAAAGAAGACAGAGAAGAAAGAGGGTGCACCCTATAATATAGTATGCAATATCCTCGTGAAGTCCAATATGCAATTCTTGGTATACCTCGTGGAACCTCAGAGAGCTACAGAGTTGTGGAAGACAGTTAGATCCTCGAGGTTTGATTTGCAAACGGATTCACAAGTTCAATCACAGACTGTTAATCAACTAAAAGCAATAACAGATGGAGGAGAAGGAACGAGCGATGTCAAGCAAAAAGGAGTTGTGGGTAGACCACAACAACAAGGAAAGATGTATGCTCTAGGTCAACGGAAAGTGGAAGAGACACCGAACACATTACTGGTAAGTTTTTTATTTGAGTATTTTTTTTAA

Protein sequence

MMSVLTLIRLSSSTLQNSPPPPHVVDSQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDVPSKGEDMPPLPPQPLPPQPLLESKDEPLVFSDVVPKKGITKKTEKKEGAPYNIVCNILVKSNMQFLVYLVEPQRATELWKTVRSSRFDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKGVVGRPQQQGKMYALGQRKVEETPNTLLVSFLFEYFF
Homology
[Close]
BLAST of CsGy5G010390.1 vs. NCBI nr
Match: KGN49555.1 (hypothetical protein Csa_5G001020 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 5.7e-96
Identity = 198/208 (95.19%), Postives = 198/208 (95.19%), Query Frame = 0 

Query: 27  SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDV 86
           SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDV
Sbjct: 207 SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDV 266

Query: 87  PSKGEDMPPLPPXXXXXXXXLESKDEPLVFSDVVPKKGITKKTEKKEGAPYNIVCNILVK 146
           PSKGEDMPPLPPXXXXXXXXLESKDEPLVFSDVVPKKGITKKT          VCNILVK
Sbjct: 267 PSKGEDMPPLPPXXXXXXXXLESKDEPLVFSDVVPKKGITKKT----------VCNILVK 326

Query: 147 SNMQFLVYLVEPQRATELWKTVRSSRFDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKG 206
           SNMQFLVYLVEPQRATELWKTVRSSRFDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKG
Sbjct: 327 SNMQFLVYLVEPQRATELWKTVRSSRFDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKG 386

Query: 207 VVGRPQQQGKMYALGQRKVEETPNTLLV 235
           VVGRPQQQGKMYALGQRKVEETPNTLLV
Sbjct: 387 VVGRPQQQGKMYALGQRKVEETPNTLLV 404

[Close]
BLAST of CsGy5G010390.1 vs. NCBI nr
Match: KGN57968.1 (hypothetical protein Csa_3G415130 [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-08
Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 0 

Query: 53  VDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDVPSKGEDMPPLPPXXXXXXXXLESKDE 112
           +DV T   D++  D+ET TSVSDNPK GII IDVPS+GED+ PLPP        LE KDE
Sbjct: 22  LDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDVRPLPP-----QPMLEPKDE 81

Query: 113 ----------PLVFSDVVPKKGITKKTEKKEGAPYNI 140
                     PLVF DV+ K    ++T +K G P+ +
Sbjct: 82  SIEFDVEVISPLVFPDVILK----ERTTRKRGIPWKL 109

[Close]
BLAST of CsGy5G010390.1 vs. NCBI nr
Match: KGN66861.1 (hypothetical protein Csa_1G701370 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 8.4e-07
Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 27  SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGII 83
           SQ  YGGGEGLSFN  E +  V D F+DV T  IDD+ VD++TRTS+S++  DGI+
Sbjct: 101 SQQCYGGGEGLSFNASEVENRVDDVFMDVPTPNIDDQHVDDKTRTSISEDLGDGIV 156

[Close]
BLAST of CsGy5G010390.1 vs. NCBI nr
Match: XP_016901625.1 (PREDICTED: uncharacterized protein LOC107991320 [Cucumis melo])

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-05
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 172 RFDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKGVVGRPQQQGKMYALGQRKVEETPNT 231
           R  ++ D  V+S T+ Q +  T  GEGTS  +QKGVVGRP QQGK+YA+ Q++ E+ P+ 
Sbjct: 323 RVVVRRDQGVESHTIEQPRISTTVGEGTSGARQKGVVGRPGQQGKVYAMTQQEAEDAPDV 382

Query: 232 LLVSFL 238
           +  + L
Sbjct: 383 ITGTIL 388

[Close]
BLAST of CsGy5G010390.1 vs. NCBI nr
Match: XP_008450207.1 (PREDICTED: uncharacterized protein LOC103491868 [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 6.0e-05
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 27  SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPID 86
           SQ  YGGGEG SFN  +   LV D FVD     ID++ ++EE  TS+S++P+DGI  +D
Sbjct: 52  SQQCYGGGEGTSFNASKVGNLVDDVFVDFSAPIIDNQTINEEMGTSISEDPEDGIYHMD 110

[Close]
BLAST of CsGy5G010390.1 vs. TrEMBL
Match: tr|A0A0A0KIM1|A0A0A0KIM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 3.8e-96
Identity = 198/208 (95.19%), Postives = 198/208 (95.19%), Query Frame = 0 

Query: 27  SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDV 86
           SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDV
Sbjct: 207 SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDV 266

Query: 87  PSKGEDMPPLPPXXXXXXXXLESKDEPLVFSDVVPKKGITKKTEKKEGAPYNIVCNILVK 146
           PSKGEDMPPLPPXXXXXXXXLESKDEPLVFSDVVPKKGITKKT          VCNILVK
Sbjct: 267 PSKGEDMPPLPPXXXXXXXXLESKDEPLVFSDVVPKKGITKKT----------VCNILVK 326

Query: 147 SNMQFLVYLVEPQRATELWKTVRSSRFDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKG 206
           SNMQFLVYLVEPQRATELWKTVRSSRFDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKG
Sbjct: 327 SNMQFLVYLVEPQRATELWKTVRSSRFDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKG 386

Query: 207 VVGRPQQQGKMYALGQRKVEETPNTLLV 235
           VVGRPQQQGKMYALGQRKVEETPNTLLV
Sbjct: 387 VVGRPQQQGKMYALGQRKVEETPNTLLV 404

[Close]
BLAST of CsGy5G010390.1 vs. TrEMBL
Match: tr|A0A0A0L860|A0A0A0L860_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415130 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-08
Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 0 

Query: 53  VDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDVPSKGEDMPPLPPXXXXXXXXLESKDE 112
           +DV T   D++  D+ET TSVSDNPK GII IDVPS+GED+ PLPP        LE KDE
Sbjct: 22  LDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDVRPLPP-----QPMLEPKDE 81

Query: 113 ----------PLVFSDVVPKKGITKKTEKKEGAPYNI 140
                     PLVF DV+ K    ++T +K G P+ +
Sbjct: 82  SIEFDVEVISPLVFPDVILK----ERTTRKRGIPWKL 109

[Close]
BLAST of CsGy5G010390.1 vs. TrEMBL
Match: tr|A0A0A0M3R6|A0A0A0M3R6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701370 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.6e-07
Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 27  SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGII 83
           SQ  YGGGEGLSFN  E +  V D F+DV T  IDD+ VD++TRTS+S++  DGI+
Sbjct: 101 SQQCYGGGEGLSFNASEVENRVDDVFMDVPTPNIDDQHVDDKTRTSISEDLGDGIV 156

[Close]
BLAST of CsGy5G010390.1 vs. TrEMBL
Match: tr|A0A1S4E0X6|A0A1S4E0X6_CUCME (uncharacterized protein LOC107991320 OS=Cucumis melo OX=3656 GN=LOC107991320 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 8.1e-06
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 172 RFDLQTDSQVQSQTVNQLKAITDGGEGTSDVKQKGVVGRPQQQGKMYALGQRKVEETPNT 231
           R  ++ D  V+S T+ Q +  T  GEGTS  +QKGVVGRP QQGK+YA+ Q++ E+ P+ 
Sbjct: 323 RVVVRRDQGVESHTIEQPRISTTVGEGTSGARQKGVVGRPGQQGKVYAMTQQEAEDAPDV 382

Query: 232 LLVSFL 238
           +  + L
Sbjct: 383 ITGTIL 388

[Close]
BLAST of CsGy5G010390.1 vs. TrEMBL
Match: tr|A0A1S3BN49|A0A1S3BN49_CUCME (uncharacterized protein LOC103491868 OS=Cucumis melo OX=3656 GN=LOC103491868 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.0e-05
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 27  SQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDDKLVDEETRTSVSDNPKDGIIPID 86
           SQ  YGGGEG SFN  +   LV D FVD     ID++ ++EE  TS+S++P+DGI  +D
Sbjct: 52  SQQCYGGGEGTSFNASKVGNLVDDVFVDFSAPIIDNQTINEEMGTSISEDPEDGIYHMD 110

The following BLAST results are available for this feature:
BLAST of CsGy5G010390.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49555.15.7e-9695.19hypothetical protein Csa_5G001020 [Cucumis sativus][more]
KGN57968.12.6e-0847.42hypothetical protein Csa_3G415130 [Cucumis sativus][more]
KGN66861.18.4e-0757.14hypothetical protein Csa_1G701370 [Cucumis sativus][more]
XP_016901625.11.2e-0545.45PREDICTED: uncharacterized protein LOC107991320 [Cucumis melo][more]
XP_008450207.16.0e-0549.15PREDICTED: uncharacterized protein LOC103491868 [Cucumis melo][more]
BLAST of CsGy5G010390.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy5G010390.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy5G010390.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KIM1|A0A0A0KIM1_CUCSA3.8e-9695.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1[more]
tr|A0A0A0L860|A0A0A0L860_CUCSA1.7e-0847.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415130 PE=4 SV=1[more]
tr|A0A0A0M3R6|A0A0A0M3R6_CUCSA5.6e-0757.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701370 PE=4 SV=1[more]
tr|A0A1S4E0X6|A0A1S4E0X6_CUCME8.1e-0645.45uncharacterized protein LOC107991320 OS=Cucumis melo OX=3656 GN=LOC107991320 PE=... [more]
tr|A0A1S3BN49|A0A1S3BN49_CUCME4.0e-0549.15uncharacterized protein LOC103491868 OS=Cucumis melo OX=3656 GN=LOC103491868 PE=... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy5G010390CsGy5G010390gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy5G010390.1CsGy5G010390.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy5G010390.1.CDS.5CsGy5G010390.1.CDS.5CDS
CsGy5G010390.1.CDS.4CsGy5G010390.1.CDS.4CDS
CsGy5G010390.1.CDS.3CsGy5G010390.1.CDS.3CDS
CsGy5G010390.1.CDS.2CsGy5G010390.1.CDS.2CDS
CsGy5G010390.1.CDS.1CsGy5G010390.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy5G010390.1.exon.5CsGy5G010390.1.exon.5exon
CsGy5G010390.1.exon.4CsGy5G010390.1.exon.4exon
CsGy5G010390.1.exon.3CsGy5G010390.1.exon.3exon
CsGy5G010390.1.exon.2CsGy5G010390.1.exon.2exon
CsGy5G010390.1.exon.1CsGy5G010390.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..98