CsGy5G004160.1 (mRNA) Cucumber (Gy14) v2

NameCsGy5G004160.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr5 : 2773855 .. 2776503 (+)
Sequence length504
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCGATCGATCCCAATGATAAATATTTTGCAAACTTCCACCTGTTTGCTGCCCCGTTTCGGTTCAGAATTTTGTTGTTGAAAGAAATAGTATCAAATTTCACATTGATAAGACTGAGAAACTGGTTACCTGGGTGTGTAAGGAAGAGCAAAACAATGGAGATGTAAGTGATTGACACTGTTCATCGGTGGCTGATGGAAGCCAAATCTTGCAGAGAAAGAGAAGAGAAGCATCAATTTTAGAATCATGCTGTTCTAAAGTAAAATATAAGAACTAAAAGTAGAGTTGAAAGCAGAACTGTGAAGCATTTAGTATTTCATGTCAGTAGTAAAAAGAAGGTTTAAATACTAATATACTCTTAAAATCCTAATAACATTCCTAATCTTGTCCCAATGTCATTCCTATATCAATACCTTTCAAAGAAATCCAAATCAGAACAACTCATGAATTCAACTCTGGAATTTCATTGGAGCCAAAGTTTCTCAGTGTCATCCACACCCCTTCCCCTTGGAAAGAAGCCTCTAGTTTTCATTACCTGTTATGCTGAATCAGATTCCAAGAAATGCCTGGAAACTATCTTTACATGTGATGTGAAATTTCTTTTATTCAAGTTTGTTAACTCACTTTCTACCTCCTGATCATTAACTGAACCAAGACTCCTTTTTCTTTGCCCAAAGTCTATTGACCAGAAGATAATCTTCTCTTCAGGTATCGATCCTATATCCGTTCTGCTGAACAGAAAGGCGATCTATCTCTGATTCTCCATCATGCCATGTAGGAAATGAAACTAAGATATCCTTTCGCACTAGACAAAGTTTGTAGTAGAACTTGAACAACAAAACTCGCAGGAATTCACAATTACAGTACATTATTCATCACTTGGTCCACCTTGGAAGAAAGAACTAAGTTGCGATCAGGTACTATGCCCTTAAAGTAGCTTTTCAACACTAATAGAAGTGTTCACAATGAATTATCATAAGGTAATGCAAACATTAACAATTTTTATAAGTTTCCACAATAATATGTTGCAAGCACAAACCAGCCCAAGTGGGGATATTATAAACCAAACATATGAAAGGATTGAGAATGTGAGACATTGTTAATTCATTGAAATCCATGTTTTCTTTAGTTTTACCCTGCTTTAGCATTTGAATGAAGAGTACACAATACAAACACCGTTTACTTGCTGAAGACTAGCAACATAATGGTTTTGAAGAGTGGTTATCATTCAGTGTACCTGTGCTTTAATTGAGGTGAATCTTGGGATAGAAGTGTCTGCCCCACCTCCAACATGTGACTTACTGCTAAAAATAATCCACACAGAAATAAGCAAGTCATTATCAGAATTAGCAAGCAGACCAAAGATTTAAAAATGCAATCTCTGTGGGAGGCAGTAGGAGGATCTAAGTCATTTACTGTGGAGTGTCATTTCACAAACTGCCTTTGGGATTGTTGGTGGAGTTCTTTTGAGGTTAGTGGGGCTCGTATCAGGGATGGGTGTTGTTAGTTGGAGAAGATGGTTTTGCATTTGCTCCCCGAGGAAGGGAAAAATGTTGTGACAAGAGAGTTCCTTTGCTATTTTGTGGGTACTTGGTTGGAGCCTAATAGCAGAGTTTTAAGGGATATGGAGAAATCTAGAGAGGACGTCTGCGAGCTTTAATGCTTCTGGTTGGGAGCTGGTCACTAGACCGTTTTGTAGTTATGATACCAGCCTTATTCCTTTGAATTTGAGTCTCTTTTCGTAGTTAGTGTTGAACTCATGTTTTTCAGGCTTGTTTTTTGTAATCCATTGTATTCTTTCATTTTTTTGAATGAAAGTTCAGTTTCTTAACAAACAAAAGAAAACCCTTGTGTTTTAGAAGGTGCGACTCTAGTCTAGATCCATGACACATATATAACACCTGGGTTTTTTTTCCTTCAGAAAGAAAGGAAGAAATTTGCTTGCATATCTAATCTTTACTATTTTCTCAAAACGGGAATGTCAAGACCACGTTGAGCATTATGGCCTACTCATTTTCGTGCAGTTTTTTTCCCACCCCAAGGCTAGCTTTGAGAATGAGAGGGTTCAAAAATGGAGGTCGAAGGAAGGAGAGAATATGGTAAGGTTTAATGCAGACAAAAAGGTACCAATAGATTTTATCAATTATATCATGCAACTATATCTCTTGCTTTTCAAGGACTTGTTCCCCCACCCATTGCCTCCCCCTGTCCCTTTCGTTAAACAAAAAACCATAAATGAATTGCATTTAACAATGGTTACATTACCAAGTGAGTAATCTTCAGCTCTTCTCTGGAGATTCCTAACTGTGGGAATGTGCTCCTTGGGAATTACCAAGAAATGCCTACAAAATGGCAATCCGAAGTAAGAATGTTTTATAGATGCCTTTAATAACAGAAGATCAATTGCATCTAACATTTTTGTGGTGGAAATTGCTAGTGCATCCTAATACAAATCAAAGGATTGAAAATGAGTTGACCAATTCTTGTAAATGACTCGAACAGAAGAAACACAAACGATTGAAAAATGAGAGTCAAATCAAAAGATGACAATGAACCCACTATTTCTTTGTTTCTTAGTACGTGATGCATATATCTCTTTCCAGATTTTACAGAATCCACAATGGCAATTGACACTCACCATTTAG

mRNA sequence

ATGAATCCGATCGATCCCAATGATAAATATTTTGCAAACTTCCACCTGTTTGCTGCCCCGTTTCGGTTCAGAATTTTGTTGTTGAAAGAAATAGTATCAAATTTCACATTGATAAGACTGAGAAACTGGTTACCTGGGTGTGTAAGGAAGAGCAAAACAATGGAGATAAAGAAAGGAAGAAATTTGCTTGCATATCTAATCTTTACTATTTTCTCAAAACGGGAATGTCAAGACCACGTTGAGCATTATGGCCTACTCATTTTCGTGCAGTTTTTTTCCCACCCCAAGGCTAGCTTTGAGAATGAGAGGGTTCAAAAATGGAGGTCGAAGGAAGGAGAGAATATGGACTTGTTCCCCCACCCATTGCCTCCCCCTGTCCCTTTCGTTAAACAAAAAACCATAAATGAATTGCATTTAACAATGGTTACATTACCAATACGTGATGCATATATCTCTTTCCAGATTTTACAGAATCCACAATGGCAATTGACACTCACCATTTAG

Coding sequence (CDS)

ATGAATCCGATCGATCCCAATGATAAATATTTTGCAAACTTCCACCTGTTTGCTGCCCCGTTTCGGTTCAGAATTTTGTTGTTGAAAGAAATAGTATCAAATTTCACATTGATAAGACTGAGAAACTGGTTACCTGGGTGTGTAAGGAAGAGCAAAACAATGGAGATAAAGAAAGGAAGAAATTTGCTTGCATATCTAATCTTTACTATTTTCTCAAAACGGGAATGTCAAGACCACGTTGAGCATTATGGCCTACTCATTTTCGTGCAGTTTTTTTCCCACCCCAAGGCTAGCTTTGAGAATGAGAGGGTTCAAAAATGGAGGTCGAAGGAAGGAGAGAATATGGACTTGTTCCCCCACCCATTGCCTCCCCCTGTCCCTTTCGTTAAACAAAAAACCATAAATGAATTGCATTTAACAATGGTTACATTACCAATACGTGATGCATATATCTCTTTCCAGATTTTACAGAATCCACAATGGCAATTGACACTCACCATTTAG

Protein sequence

MNPIDPNDKYFANFHLFAAPFRFRILLLKEIVSNFTLIRLRNWLPGCVRKSKTMEIKKGRNLLAYLIFTIFSKRECQDHVEHYGLLIFVQFFSHPKASFENERVQKWRSKEGENMDLFPHPLPPPVPFVKQKTINELHLTMVTLPIRDAYISFQILQNPQWQLTLTI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy5G004160CsGy5G004160gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy5G004160.1CsGy5G004160.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy5G004160.1.exon.1CsGy5G004160.1.exon.1exon
CsGy5G004160.1.exon.2CsGy5G004160.1.exon.2exon
CsGy5G004160.1.exon.3CsGy5G004160.1.exon.3exon
CsGy5G004160.1.exon.4CsGy5G004160.1.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy5G004160.1.CDS.1CsGy5G004160.1.CDS.1CDS
CsGy5G004160.1.CDS.2CsGy5G004160.1.CDS.2CDS
CsGy5G004160.1.CDS.3CsGy5G004160.1.CDS.3CDS
CsGy5G004160.1.CDS.4CsGy5G004160.1.CDS.4CDS