CsGy4G021530.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G021530.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Polynucleotidyl transferase ribonuclease H-like superfamily protein
Location	Chr4 : 28180994 .. 28184205 (-)
Sequence length	1427

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAATTTAAAACTAAAGTTCAAATTTAAGCCGTTGATGAATAAAAATAAAATAATTTTGGGTAATAGCCCTCGAATTTGCTGCTCCAGAATTCGACCACTCTAACGTCCGTCGTCTTCCCCGGCTCCGGTCGACCGTCGGAGTGTGTACGTCATCCACTCACTTCCCTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCTTAAGTTTTCATCATTCTACTCAATCCCATGTCATCCTCTGCTTCCCGTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTTTCCCCTTATCCCACGAACCATCTTCTTCAGCTTCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACTCATGGCAGGTGCACAATGGTATTTTTCAATTCTGGTTTTAGTTGTAGCATGCGCGTTTTTCGAATGCTTTTATGTTTTATTTTCTCCCATTTTGTGAAATGATTGAAGATTCTACTTGACTGTGGATGCTAAGTTGTTGGTTTGGCGTTGTACACCACTTGTTCGACGATATTCCTCACAGAGCTTTTGCTCGTTTTTGCTGCGTGTTAAGCTGTCTAGTAGTTGATTTTTTATTAGGGACTCCATAATTTGAGAATTAGACGGGTAAGGTAATGGACATATCGTTTTAATTCTAAAATTGGATAATCTGTATCCCATCTGAACAAAATAGGAAATATTGGAATTCTATAAAAGTTTACGAATGTACAACCATTTTTCACATTTGATCAGGCTCTTGTCTTATGTTGTGTGTTCAGATGGTTTTCATGGATTTCCCCAGCTGAAATTTCGCAGAAAAATTTAGATATTTATTGTCTTATGTTGTGTAGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAACCATATGCGAACTCAGGACTTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTAAATGCCAAGACGATGGGTGTGACAGGTTTTTTCCACAGGTTCTACATGCTTCTTTATAACGTGCTCATTTTTGCTATTGGTTATGCATCAATTTCTTTTTTCACTTGGCAGATTGTGTATTTTATGCATTTCTATATTTCCCCGTTACCTGTTTTTCTTCTTAATAGACAATATAATCTCAAAGAGAATATAGAAGGAATTACCTGAGTATCCGCACTAATATATTAGATACTGATGCCTTACTACCCCTTTACCTTACATTTCTGATGGGCATATGAGTAATATAAGTATGGATGAGAGATGTCATTGATCGGCTTGTTATGTTTGTAACCCAATCATGCAAAATGATTTAACTTTCAAGAATCTCAACAAGTTCTTTGGGTAATTAAGAACAAGACATTTATATTTTTTCCTTTTTTGTTGCCATGTTTGCTGACGATTGCTTTAAATTCTTCCTCAGGTTTGTTAGGCCATCAAGAATGAGTGAACAGAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGGTAGGCTTCTAGTCTTGTATGGGGAAGGCTTTATAATGTTTGACATTATTGTGAATTCATTTTGTTCTGAATTATTGATCAACCGTCAATCAAGGCCATGATAGACTTTTGGATGTATTTCACAATCTGATTGCATGACGTATTGATGTACATGTCCAATGCTAATTTGATAGGACAAGCTTTTCTGCAGTATGTTGACACCTCCTGTTAATATTCTACTGTAACTTTTCTTTACTAGCTGATAGTTCCATATTATAATTCACAGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATTCAACAGTTCGAGGATTGGCTGGTTCAGCATCAGCTATGGAGAAAGGAACTGGGCGGTGTTCTTGATCGAGCGGCATTTGTGACATGGCAAGCCTCATTTTCTTGATCTACTTTTATTTTCCTTCCTAAATTGTTCATTTCTTTATATTGTTAATGTGGTATGTCTATCAGGAGTTTGCCCAGCAACCACTAGGTCTTTTCACCCTTTTATAACGTTAAGTTTTGATTATCTAATGATTTATTCTCTCTTTACTTCTACCAGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAGCGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACACAAAAAAGGTACAACAATCCTGTCAAAATAACAGATCGTAGCATCTTGAGTGGCTTTATTATTCTGTTGTCAAGAGAGAAACACATTATTTTACTTTTAGGAGTCAGAATTATGAAATCAATCTGCTGCTGATCGTTTCACTTTTCTTCAACTGCTTGTATAGATTATATCACAAGCATTGCAAAACACAATACATTGGTTTAGAATGATCAAAACAGAGTTCAACATTCATTATTCCACACGGGAAAGACTTGAATGAAAATGATGTTCTTTGTCATACTTACACATAACATAATAATGATTAATGTAATTGATTGCTTTAGGTGGCTATAGTTCGCTACACTCCATAATTTGTTTAGTTTCTCTAAGATCAGATCTTACACGACCAATTATTGATGAAGTTGTTTACTTTGGATGGTAATTGGTAGGCAACGGGAATGGCGACAATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGTATAGATGATACAAAGAATATCGTGAGAGTGTTGCAGAGAATGGTTGGTGATGGAGCACATTTGCAAGTCACTGCACGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAGTGATGGCTGTCTTCAGCAAGTTATCTTCCATATTTGTCTGGATGATCTATGGAATGGATAAGTCTTTAAAATAGATACTTCGATCTCATGAATTGTAGATGAATCTGTCAATTCAGTTCTGATGTGTTTCAAGTGTTGAAATTTGACCAGATGAAATATGTTGCAATTCTAAATTTGAAGTTTAGAGGTTTCATTTGAAATATCATTAAAAGAAAATCGTATTCTCAAATGTGTTTAACTAATGAATTATTAAACATATATATATTATATGTACCAGATTGCTTAGATTTTAAAGAAT

mRNA sequence

AAAAAAATTTAAAACTAAAGTTCAAATTTAAGCCGTTGATGAATAAAAATAAAATAATTTTGGGTAATAGCCCTCGAATTTGCTGCTCCAGAATTCGACCACTCTAACGTCCGTCGTCTTCCCCGGCTCCGGTCGACCGTCGGAGTGTGTACGTCATCCACTCACTTCCCTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCTTAAGTTTTCATCATTCTACTCAATCCCATGTCATCCTCTGCTTCCCGTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTTTCCCCTTATCCCACGAACCATCTTCTTCAGCTTCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACTCATGGCAGGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAACCATATGCGAACTCAGGACTTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTAAATGCCAAGACGATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAGAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATTCAACAGTTCGAGGATTGGCTGGTTCAGCATCAGCTATGGAGAAAGGAACTGGGCGGTGTTCTTGATCGAGCGGCATTTGTCCCACATCAATGTAGCGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACACAAAAAAGGCAACGGGAATGGCGACAATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGTATAGATGATACAAAGAATATCGTGAGAGTGTTGCAGAGAATGGTTGGTGATGGAGCACATTTGCAAGTCACTGCACGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAGTGATGGCTGTCTTCAGCAAGTTATCTTCCATATTTGTCTGGATGATCTATGGAATGGATAAGTCTTTAAAATAGATACTTCGATCTCATGAATTGTAGATGAATCTGTCAATTCAGTTCTGATGTGTTTCAAGTGTTGAAATTTGACCAGATGAAATATGTTGCAATTCTAAATTTGAAGTTTAGAGGTTTCATTTGAAATATCATTAAAAGAAAATCGTATTCTCAAATGTGTTTAACTAATGAATTATTAAACATATATATATTATATGTACCAGATTGCTTAGATTTTAAAGAAT

Coding sequence (CDS)

ATGTTTCTGAGAGCTTCGCTGCTTAAGTTTTCATCATTCTACTCAATCCCATGTCATCCTCTGCTTCCCGTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTTTCCCCTTATCCCACGAACCATCTTCTTCAGCTTCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACTCATGGCAGGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAACCATATGCGAACTCAGGACTTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTAAATGCCAAGACGATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAGAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATTCAACAGTTCGAGGATTGGCTGGTTCAGCATCAGCTATGGAGAAAGGAACTGGGCGGTGTTCTTGATCGAGCGGCATTTGTCCCACATCAATGTAGCGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACACAAAAAAGGCAACGGGAATGGCGACAATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGTATAGATGATACAAAGAATATCGTGAGAGTGTTGCAGAGAATGGTTGGTGATGGAGCACATTTGCAAGTCACTGCACGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAG

Protein sequence

MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVPHQCSVSKMKLPDYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQVTARRNPKSPQHVKFLFENRI

Homology

[Close]

BLAST of CsGy4G021530.1 vs. NCBI nr
Match: XP_004146041.1 (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus] >KGN55096.1 hypothetical protein Csa_4G628930 [Cucumis sativus])

HSP 1 Score: 644.4 bits (1661), Expect = 2.0e-181
Identity = 314/325 (96.62%), Postives = 314/325 (96.62%), Query Frame = 0


Query: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60
           MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF
Sbjct: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120
           PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF-----------VPHQCSVSKMKLP 240
           DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF           VPHQCSVSKMKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
Sbjct: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQVTARRNPKSPQHVKFLFENRI 315
           AHLQVTARRNPKSPQHVKFLFENRI
Sbjct: 301 AHLQVTARRNPKSPQHVKFLFENRI 325

[Close]

BLAST of CsGy4G021530.1 vs. NCBI nr
Match: XP_008463707.1 (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis melo])

HSP 1 Score: 583.9 bits (1504), Expect = 3.1e-163
Identity = 288/325 (88.62%), Postives = 292/325 (89.85%), Query Frame = 0


Query: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60
           MFLRASLLK SSFYSIPCHPLLPVSLSSSICSSPRTP              PSSSA S+F
Sbjct: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPXXXXXXXXXXXXXXPSSSAPSQF 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120
           PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQD DYFLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF-----------VPHQCSVSKMKLP 240
           DTAILY DVIQQFEDWLVQHQLWRKE GGVLDRAAF           VPHQC+VSKMKLP
Sbjct: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGDG
Sbjct: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQVTARRNPKSPQHVKFLFENRI 315
           AHLQ+TARRNPKSPQ VKFLFENRI
Sbjct: 301 AHLQITARRNPKSPQQVKFLFENRI 325

[Close]

BLAST of CsGy4G021530.1 vs. NCBI nr
Match: XP_022935722.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita moschata])

HSP 1 Score: 565.8 bits (1457), Expect = 8.9e-158
Identity = 273/325 (84.00%), Postives = 289/325 (88.92%), Query Frame = 0


Query: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60
           MF+RA LLK SSFYSIPCH L+P+ LSS+ICSSPRTP SIRCHS+ P +H+PSSSA SE 
Sbjct: 1   MFVRAPLLKVSSFYSIPCHSLVPLYLSSAICSSPRTPLSIRCHSSLPTAHDPSSSAPSES 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD ++FLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF-----------VPHQCSVSKMKLP 240
           DTAILYKDVIQQFEDWLV+HQLWRKELGGVLDRAAF           VPHQCSVS MKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGM TMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

Query: 301 AHLQVTARRNPKSPQHVKFLFENRI 315
           AHLQ+TARRNP SPQHVKF FENRI
Sbjct: 301 AHLQITARRNPNSPQHVKFRFENRI 325

[Close]

BLAST of CsGy4G021530.1 vs. NCBI nr
Match: XP_022976542.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxima])

HSP 1 Score: 565.1 bits (1455), Expect = 1.5e-157
Identity = 272/325 (83.69%), Postives = 290/325 (89.23%), Query Frame = 0


Query: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60
           MF+RA LLK SSFYSIPCH L+P+SLSS+ICSSPRTP +IRCHS+ P +HEPSSSA SE 
Sbjct: 1   MFVRAPLLKVSSFYSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD ++FLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF-----------VPHQCSVSKMKLP 240
           DTAILYKDVIQQFEDWLV+HQ+WRK+LGGVLDRAAF           VPHQCSVS MKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

Query: 301 AHLQVTARRNPKSPQHVKFLFENRI 315
           AHLQ+TARRNP SPQHVKF FENRI
Sbjct: 301 AHLQITARRNPNSPQHVKFHFENRI 325

[Close]

BLAST of CsGy4G021530.1 vs. NCBI nr
Match: XP_023535410.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564.7 bits (1454), Expect = 2.0e-157
Identity = 271/325 (83.38%), Postives = 290/325 (89.23%), Query Frame = 0


Query: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60
           MF+RA LLK SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+ P +HEPSSSA SE 
Sbjct: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLH+KKFNHDISRELQVDVA S HMRTQD ++FLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF-----------VPHQCSVSKMKLP 240
           DTAILYKDVIQQFEDWLV+HQLWRKELGGVLDRAAF           VPHQCSVS MKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGMATMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

Query: 301 AHLQVTARRNPKSPQHVKFLFENRI 315
           AHLQ+TARRNP SPQ VKF FENRI
Sbjct: 301 AHLQITARRNPNSPQQVKFRFENRI 325

[Close]

BLAST of CsGy4G021530.1 vs. TAIR10
Match: AT3G15140.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 342.4 bits (877), Expect = 2.9e-94
Identity = 156/259 (60.23%), Postives = 202/259 (77.99%), Query Frame = 0


Query: 67  RWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLVLDLEGK 126
           RWRP CLY+THG+CT MDDP H++ FNHD S+EL+V  A     ++Q+F++FLV+DLEGK
Sbjct: 78  RWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFNFFLVIDLEGK 137

Query: 127 VEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILY 186
           VEI+EFP+++V+AKTM V   FHRFVRP++MSEQ IN+YIEGKYG+ GVDRVWHDTAI +
Sbjct: 138 VEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVDRVWHDTAIPF 197

Query: 187 KDVIQQFEDWLVQHQLWRKELGGVLDRAAFV-----------PHQCSVSKMKLPDYFMEW 246
           K V+++FE WL +H LW K+    L+ AAFV           P QC VS + LP YFMEW
Sbjct: 198 KQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSNINLPPYFMEW 257

Query: 247 INIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQVT 306
           IN+KDVYLNFY ++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM+ +GA L++T
Sbjct: 258 INLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRMLSEGAVLKLT 317

Query: 307 ARRNPKSPQHVKFLFENRI 315
           ARR+  + ++V+FLF+NRI
Sbjct: 318 ARRSKSNMRNVEFLFKNRI 336

[Close]

BLAST of CsGy4G021530.1 vs. Swiss-Prot
Match: sp|Q8W566|Y3514_ARATH (Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana OX=3702 GN=At3g15140 PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 5.2e-93
Identity = 156/259 (60.23%), Postives = 202/259 (77.99%), Query Frame = 0


Query: 67  RWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLVLDLEGK 126
           RWRP CLY+THG+CT MDDP H++ FNHD S+EL+V  A     ++Q+F++FLV+DLEGK
Sbjct: 78  RWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFNFFLVIDLEGK 137

Query: 127 VEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILY 186
           VEI+EFP+++V+AKTM V   FHRFVRP++MSEQ IN+YIEGKYG+ GVDRVWHDTAI +
Sbjct: 138 VEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVDRVWHDTAIPF 197

Query: 187 KDVIQQFEDWLVQHQLWRKELGGVLDRAAFV-----------PHQCSVSKMKLPDYFMEW 246
           K V+++FE WL +H LW K+    L+ AAFV           P QC VS + LP YFMEW
Sbjct: 198 KQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSNINLPPYFMEW 257

Query: 247 INIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQVT 306
           IN+KDVYLNFY ++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM+ +GA L++T
Sbjct: 258 INLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRMLSEGAVLKLT 317

Query: 307 ARRNPKSPQHVKFLFENRI 315
           ARR+  + ++V+FLF+NRI
Sbjct: 318 ARRSKSNMRNVEFLFKNRI 336

[Close]

BLAST of CsGy4G021530.1 vs. Swiss-Prot
Match: sp|Q5FVR4|ERI1_RAT (3'-5' exoribonuclease 1 OS=Rattus norvegicus OX=10116 GN=Eri1 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.2e-22
Identity = 61/200 (30.50%), Postives = 103/200 (51.50%), Query Frame = 0


Query: 115 FDYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINE 174
           +DY  ++D E             EIIEFPV+L+N  ++ +   F ++VRP   S+  ++E
Sbjct: 123 YDYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQ--LSE 182

Query: 175 YIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWRKE-----LGGVLDRAAFVPH 234
           +     G  G+ +   D A  +  V+++  +W+   +L  K        G  D + F+  
Sbjct: 183 FC---IGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNI 242

Query: 235 QCSVSKMKLPDYFMEWINIKDVYLNFY--TKKATGMATMMRQLEMPLVGSHHLGIDDTKN 294
           QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+DD+KN
Sbjct: 243 QCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKN 302

Query: 295 IVRVLQRMVGDGAHLQVTAR 298
           I R+  RM+ DG  L++  +
Sbjct: 303 IARIAVRMLQDGCELRINEK 317

[Close]

BLAST of CsGy4G021530.1 vs. Swiss-Prot
Match: sp|Q7TMF2|ERI1_MOUSE (3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-21
Identity = 61/200 (30.50%), Postives = 102/200 (51.00%), Query Frame = 0


Query: 115 FDYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINE 174
           +DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      +++E
Sbjct: 123 YDYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPE--VNAQLSE 182

Query: 175 YIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWRKE-----LGGVLDRAAFVPH 234
           +     G  G+ +   D A  +  V+++  +W+   +L  K        G  D + F+  
Sbjct: 183 FC---IGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSI 242

Query: 235 QCSVSKMKLPDYFMEWINIKDVYLNFY--TKKATGMATMMRQLEMPLVGSHHLGIDDTKN 294
           QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+DD+KN
Sbjct: 243 QCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKN 302

Query: 295 IVRVLQRMVGDGAHLQVTAR 298
           I R+  RM+ DG  L++  +
Sbjct: 303 IARIAVRMLQDGCELRINEK 317

[Close]

BLAST of CsGy4G021530.1 vs. Swiss-Prot
Match: sp|Q8IV48|ERI1_HUMAN (3'-5' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=ERI1 PE=1 SV=3)

HSP 1 Score: 103.6 bits (257), Expect = 4.1e-21
Identity = 60/200 (30.00%), Postives = 101/200 (50.50%), Query Frame = 0


Query: 115 FDYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINE 174
           +DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      ++++
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE--INTQLSD 186

Query: 175 YIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWRKE-----LGGVLDRAAFVPH 234
           +        G+ +   D A  +  V+++  DW+   +L  K        G  D + F+  
Sbjct: 187 FC---ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNI 246

Query: 235 QCSVSKMKLPDYFMEWINIKDVYLNFY--TKKATGMATMMRQLEMPLVGSHHLGIDDTKN 294
           QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+DD+KN
Sbjct: 247 QCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKN 306

Query: 295 IVRVLQRMVGDGAHLQVTAR 298
           I R+  RM+ DG  L++  +
Sbjct: 307 IARIAVRMLQDGCELRINEK 321

[Close]

BLAST of CsGy4G021530.1 vs. Swiss-Prot
Match: sp|A6QLH5|ERI3_BOVIN (ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 53/202 (26.24%), Postives = 95/202 (47.03%), Query Frame = 0


Query: 113 QDFDYFLVLDLEGKV--------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINE 172
           Q + YFLVLD E           EIIEFP++ +N +TM +   FH +V+P  +   ++  
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 200

Query: 173 YIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWRKELGGVL------DRAAFVP 232
           +        G+ +   D     + V+++ ++W+ +  L    +  +       D    +P
Sbjct: 201 FCT---ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 260

Query: 233 HQCSVSKMKLPDYFMEWINIKDVY---LNFYTKKATGMATMMRQLEMPLVGSHHLGIDDT 292
            QC    + + DYF +WIN+K  Y   +  + K   G+  M + L +  +G  H GIDD 
Sbjct: 261 GQCQYLGLPVADYFKQWINLKKAYSFAMGCWPK--NGLLDMNKGLSLQHIGRPHSGIDDC 320

Query: 293 KNIVRVLQRMVGDGAHLQVTAR 298
           KNI  +++ +   G   + T++
Sbjct: 321 KNIANIMKTLAYRGFIFKQTSK 335

[Close]

BLAST of CsGy4G021530.1 vs. TrEMBL
Match: tr|A0A0A0L4N2|A0A0A0L4N2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628930 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 1.3e-181
Identity = 314/325 (96.62%), Postives = 314/325 (96.62%), Query Frame = 0


Query: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60
           MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF
Sbjct: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120
           PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF-----------VPHQCSVSKMKLP 240
           DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF           VPHQCSVSKMKLP
Sbjct: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
Sbjct: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQVTARRNPKSPQHVKFLFENRI 315
           AHLQVTARRNPKSPQHVKFLFENRI
Sbjct: 301 AHLQVTARRNPKSPQHVKFLFENRI 325

[Close]

BLAST of CsGy4G021530.1 vs. TrEMBL
Match: tr|A0A1S3CJV9|A0A1S3CJV9_CUCME (uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501789 PE=4 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 2.1e-163
Identity = 288/325 (88.62%), Postives = 292/325 (89.85%), Query Frame = 0


Query: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60
           MFLRASLLK SSFYSIPCHPLLPVSLSSSICSSPRTP              PSSSA S+F
Sbjct: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPXXXXXXXXXXXXXXPSSSAPSQF 60

Query: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120
           PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQD DYFLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF-----------VPHQCSVSKMKLP 240
           DTAILY DVIQQFEDWLVQHQLWRKE GGVLDRAAF           VPHQC+VSKMKLP
Sbjct: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240

Query: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300
           DYFMEWINIKDVYLNFY KKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGDG
Sbjct: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300

Query: 301 AHLQVTARRNPKSPQHVKFLFENRI 315
           AHLQ+TARRNPKSPQ VKFLFENRI
Sbjct: 301 AHLQITARRNPKSPQQVKFLFENRI 325

[Close]

BLAST of CsGy4G021530.1 vs. TrEMBL
Match: tr|A0A1S3CJW2|A0A1S3CJW2_CUCME (uncharacterized exonuclease domain-containing protein At3g15140 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501789 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.9e-125
Identity = 223/243 (91.77%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 83  MDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTM 142
           MDDPLHIKKFNHDISRELQVDVARSNHMRTQD DYFLVLDLEGKVEIIEFPVILVNAKTM
Sbjct: 1   MDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTM 60

Query: 143 GVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQL 202
           GVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY DVIQQFEDWLVQHQL
Sbjct: 61  GVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWHDTAILYNDVIQQFEDWLVQHQL 120

Query: 203 WRKELGGVLDRAAF-----------VPHQCSVSKMKLPDYFMEWINIKDVYLNFYTKKAT 262
           WRKE GGVLDRAAF           VPHQC+VSKMKLPDYFMEWINIKDVYLNFY KKAT
Sbjct: 121 WRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKAT 180

Query: 263 GMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQVTARRNPKSPQHVKFLFE 315
           GMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGDGAHLQ+TARRNPKSPQ VKFLFE
Sbjct: 181 GMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQITARRNPKSPQQVKFLFE 240

[Close]

BLAST of CsGy4G021530.1 vs. TrEMBL
Match: tr|A0A2P4LWJ6|A0A2P4LWJ6_QUESU (Putative exonuclease domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_65631 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 5.6e-108
Identity = 186/279 (66.67%), Postives = 225/279 (80.65%), Query Frame = 0


Query: 49  SHEPSS--SASSEFPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVAR 108
           +H PSS  +  S    V+ NRW+P CLY+T G+CT MDD +H++KFNHD SR+L+V++A 
Sbjct: 15  AHNPSSPPTVPSHSHKVSKNRWKPMCLYYTQGKCTKMDDAIHLEKFNHDCSRDLEVNIAE 74

Query: 109 SNHMRTQDFDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYI 168
             H+R+Q+ D+FLVLDLEG+VEI+EFPV+++NAKTM V  FFHRFVRPS MSEQRINEYI
Sbjct: 75  LKHIRSQNLDFFLVLDLEGRVEILEFPVLMINAKTMDVMDFFHRFVRPSEMSEQRINEYI 134

Query: 169 EGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVP-------- 228
           EGKYGKFGVDRVWHDTAI + +V+QQFE WL QH LW KELGG L++AAFV         
Sbjct: 135 EGKYGKFGVDRVWHDTAIPFTEVLQQFEVWLAQHHLWEKELGGRLNQAAFVTCGNWDLKT 194

Query: 229 ---HQCSVSKMKLPDYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDT 288
               QC VSKMKLP YFMEWIN+KDVYLNFY ++ATGM TMM++L +PLVGSHHLGIDDT
Sbjct: 195 KVLQQCKVSKMKLPPYFMEWINLKDVYLNFYKRRATGMMTMMKELRIPLVGSHHLGIDDT 254

Query: 289 KNIVRVLQRMVGDGAHLQVTARRNPKSPQHVKFLFENRI 315
           KNI RVLQ M+ DGA LQ+TARRN  SP++V+FLF+NRI
Sbjct: 255 KNIARVLQHMLADGALLQITARRNSDSPENVEFLFKNRI 293

[Close]

BLAST of CsGy4G021530.1 vs. TrEMBL
Match: tr|A0A2N9G3G7|A0A2N9G3G7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22024 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.2e-107
Identity = 195/324 (60.19%), Postives = 239/324 (73.77%), Query Frame = 0


Query: 4   RASLLKFSSFYSIPCHPLLPVSLSSSICSSP--RTPFSIRCHSAFPLSHEPSSSASSEFP 63
           RA+L   SSF       LLP+SLS    S P  R        S    +HEP    +    
Sbjct: 7   RATLSWVSSFRPSSLSHLLPISLSPQTHSLPPMRASHLFASLSTTTTAHEPPFPPTVPSY 66

Query: 64  DVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLVL 123
             ++NRW+P CLY+T G+CT MDD  H++KFNHD SR+L+V++A   H+R+Q+ D+FLVL
Sbjct: 67  KGSNNRWKPMCLYYTQGKCTKMDDAFHLEKFNHDCSRDLEVNIAELKHIRSQNLDFFLVL 126

Query: 124 DLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHD 183
           DLEGKVEI+EFPV+++NAKT+ V  FFHRFVRPS MSEQRINEYIEGKYGKFGVDRVWHD
Sbjct: 127 DLEGKVEILEFPVLMINAKTLDVMDFFHRFVRPSEMSEQRINEYIEGKYGKFGVDRVWHD 186

Query: 184 TAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAF-----------VPHQCSVSKMKLPD 243
           TAI +K+V+ QFE WL QH LW KELGG L++AAF           VP QC VS MKLP 
Sbjct: 187 TAIPFKEVLHQFEVWLAQHHLWEKELGGHLNQAAFVTCGNWDLKTKVPQQCKVSNMKLPP 246

Query: 244 YFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGA 303
           YF+EWIN+KDVYLNFY ++ATGM TMM++L +P +GSHHLGIDDTKNI RVLQ M+ DGA
Sbjct: 247 YFLEWINLKDVYLNFYKRRATGMMTMMKELCIPSLGSHHLGIDDTKNIARVLQHMLADGA 306

Query: 304 HLQVTARRNPKSPQHVKFLFENRI 315
            +Q+TARRN  SP++V+FLF+NRI
Sbjct: 307 LIQITARRNSDSPENVEFLFKNRI 330

The following BLAST results are available for this feature:

BLAST of CsGy4G021530.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146041.1	2.0e-181	96.62	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo...	[more]
XP_008463707.1	3.1e-163	88.62	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo...	[more]
XP_022935722.1	8.9e-158	84.00	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita mosch...	[more]
XP_022976542.1	1.5e-157	83.69	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxim...	[more]
XP_023535410.1	2.0e-157	83.38	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita pepo ...	[more]

BLAST of CsGy4G021530.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15140.1	2.9e-94	60.23	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of CsGy4G021530.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W566\|Y3514_ARATH	5.2e-93	60.23	Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis t...	[more]
sp\|Q5FVR4\|ERI1_RAT	8.2e-22	30.50	3'-5' exoribonuclease 1 OS=Rattus norvegicus OX=10116 GN=Eri1 PE=2 SV=1	[more]
sp\|Q7TMF2\|ERI1_MOUSE	1.8e-21	30.50	3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2	[more]
sp\|Q8IV48\|ERI1_HUMAN	4.1e-21	30.00	3'-5' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=ERI1 PE=1 SV=3	[more]
sp\|A6QLH5\|ERI3_BOVIN	1.5e-15	26.24	ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1	[more]

BLAST of CsGy4G021530.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L4N2\|A0A0A0L4N2_CUCSA	1.3e-181	96.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628930 PE=4 SV=1	[more]
tr\|A0A1S3CJV9\|A0A1S3CJV9_CUCME	2.1e-163	88.62	uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 OS=Cu...	[more]
tr\|A0A1S3CJW2\|A0A1S3CJW2_CUCME	2.9e-125	91.77	uncharacterized exonuclease domain-containing protein At3g15140 isoform X2 OS=Cu...	[more]
tr\|A0A2P4LWJ6\|A0A2P4LWJ6_QUESU	5.6e-108	66.67	Putative exonuclease domain-containing protein OS=Quercus suber OX=58331 GN=CFP5...	[more]
tr\|A0A2N9G3G7\|A0A2N9G3G7_FAGSY	1.2e-107	60.19	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22024 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR036397	RNaseH_sf
IPR013520	Exonuclease_RNaseT/DNA_pol3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0016740	transferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy4G021530	CsGy4G021530	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G021530.1.five_prime_UTR.1	CsGy4G021530.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G021530.1.exon.6	CsGy4G021530.1.exon.6	exon
CsGy4G021530.1.exon.5	CsGy4G021530.1.exon.5	exon
CsGy4G021530.1.exon.4	CsGy4G021530.1.exon.4	exon
CsGy4G021530.1.exon.3	CsGy4G021530.1.exon.3	exon
CsGy4G021530.1.exon.2	CsGy4G021530.1.exon.2	exon
CsGy4G021530.1.exon.1	CsGy4G021530.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G021530.1.CDS.6	CsGy4G021530.1.CDS.6	CDS
CsGy4G021530.1.CDS.5	CsGy4G021530.1.CDS.5	CDS
CsGy4G021530.1.CDS.4	CsGy4G021530.1.CDS.4	CDS
CsGy4G021530.1.CDS.3	CsGy4G021530.1.CDS.3	CDS
CsGy4G021530.1.CDS.2	CsGy4G021530.1.CDS.2	CDS
CsGy4G021530.1.CDS.1	CsGy4G021530.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G021530.1.three_prime_UTR.1	CsGy4G021530.1.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy4G021530.1	CsGy4G021530.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 122..282 e-value: 6.5E-7 score: 29.9
IPR036397	Ribonuclease H superfamily	GENE3D	G3DSA:3.30.420.10		coord: 105..313 e-value: 1.5E-44 score: 154.1
None	No IPR available	PANTHER	PTHR23044	3'-5' EXONUCLEASE ERI1-RELATED	coord: 54..313
None	No IPR available	PANTHER	PTHR23044:SF52	ERI1 EXORIBONUCLEASE 3	coord: 54..313
None	No IPR available	CDD	cd06133	ERI-1_3'hExo_like	coord: 118..285 e-value: 4.55512E-41 score: 141.589
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 113..293