CsGy4G017640.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy4G017640.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr4 : 22774654 .. 22778452 (+)
Sequence length2079
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAACATATTGGAGATGCGTTAATAATTTTTGAGATGATAAATGAGAAGGATATTTTCTCGTGGAACTCGATTATATCAGTTCATGAACAATGTGGTGATCATGATGGTACCTTGAGGCTTTTTGATAAGATGTTAGGTTCTGGGATTCTACCAGATTTGGTAACCATCACAACTGTGCTTCCAGCTTGCTCTCATTTGGCTGCGCTCATGCACGGTAGAGAAATTCATGGATACATGATCATTAATGGACTTGGAAAGGATGATGAAAATGGAGCTGTAGATAATTTACTTGTAAGTAATGCTGTTATGGATATGTATGCAAAATGCGGTAGTATGAACAATGCCCTCAAGATTTTTGATTCAATGAGCAAAAAGGACGTGGCATCATGGAATATCATGATTATGGGTTATGGTATGCATGGTTATGCTTTGGAGGCATTGGGTATGTTTTCTCAAATGTGTGAGGCTGAATTTAAGCCAAATGAAGTTACGCTTGTTGGAGTTCTATCAGCATGCAATCATGCAGGCTTTGTGTCTCATGGGCGTTTGTTTTTAGCTCAGATGGAATCTACATTTGGTGTTATTCCAACTATTGAGCATTATACGTGTGTAATTGATATGCTTGGTCGAGCTGGGCATTTAGAGGACGCGTATGAGATCGTGCAGAAAATGCCTATTCAAGCCAATCCCGTTGTTTGGAGGGCTTTATTGGGAGCATGTCGACTTCATGGGAATGCAGAGTTGGCAGAAATTGCAGCACGACAAGTACTGCAACTAGAACCAGAGCATTGTGGGAGTTATGTATTGATGTCCAATGTTTATGGAGTTATAGGTCGATACGAAGAGGTGTTGGAGGTTAGAAAAACGATGAAGGAACAAAATGTCAAGAAGACACCTGGTTGTAGTTGGATTGAACTCAAGGATGGGGTGCATGTTTTCCGTACTGGAGATAGGACACATTCAGAATTGAATGCATTGACTAATCAACTATGTGATATTGGATTCATTTTAGATGAAGTTTTGAATTTATATTGAGATATGGTAACATGTACGATTGCATTAACCTCTCTTTTTCCAAAGATTGACGAGTAACAAGCATCAAAACTTGTACATTGATGAACTTACTTCGTCTTTTTGACAAGAGCGATTGGTAATCAAGCGGCAAAACTGGGTAATTGTAATAACCTTTTTCTTTGAAATGTGAGTCATTGATTAATTGATGCCTTCAGACAAATATCTTTGATTGCCTATCTCCTTGGTATTCATTTTACAAAAGAATGGGAGAGAAGAAAAGGAAAAAAACCCTCTCTCATTTACTTACGTGTTATAATTTCTCTCGCTCCTTGCTTGGTCACTTCTACATTTTTCTTCAAAGTGCAAGTACGTTCTTTTCCATCTCCCTGACTCAATGAGATCTCTCCAGTGCAAAGTTTCTTAGTTGAGTACAGTTTATCTTCAAGGATATGAATGAGTCACTGACAGAACTGATGGTCAGAGGTGGTGCCTTTTTGTGGCTATTTGCATTCATCCTCTCTCAACTATGGCCTTGTTCATATTGCTACACTCTTGCTTTTCTTTAAAGTTCTTTTCTTGAATCTCTTGGAATTACGAGGAGATTTTATTTGCATTATGATTGAGATATGCAAAGAGCCATTGTCATTGCCATTGCTTAATGCCGATCTCAAGAAGCTTTAGGAGGTATCTAATCGATCATTGGATCTTTTTAGCAGAAGATCTGTTGTAAGCTTTCCTTCCTTCCATTCACTTCACTTTCCGAAGTACATGGCCTCAGTGGTTACATCTCTCTACAATTTCGTTTCTCATTGTTAATCCTGGCAACACTCCCATTACTCCACTAATGATTATGAAAAACAAATTCGTTGTTTTATTGACAATTAAAATCCTTATATGCACTAGTTTGGGTGATTGCTCTTTAGATCTTGTTTATTATAATTTGCGATATAAAATCTTTTTGCTAGGGTCTATTACAGTTCTTGACAAACATATGCATTAGTTTTTGTGAAGTACATGGCGCCACTTGAATACTCCAACTTTGTAGATAAGTGGTTGCATCACTGAAATAAGAGAATAATTGGTACTAACGTTTCTCTCCTCTGCAATTGTAGGCTTGAAATGGTTTTATGAGATTTGAACAGGCATCAAGAATACAGGCAAGAAGTGGGAGTTGATAAAGGTTATTATCCTATTAGTATTTCTGATATATTTAATGATGATGTTCAATGTTTAAGTAATCAAAATGTTTTGATGCTCAATTAATTTATCAAGAAAGCATTGGGGAGAGTTGGGGATGTTGTAGGATTATTATTATTTGGTGTTTGTTGCAACTGTTCGTCTGTTCCTTTTAAATTATATCATTTTACGAATTTGTTATTATTACTTGTCTGTGTGAATTGAATTCTTTTTTCCTGGAATACTAAAAAATGTTATAGACCACTATAGCGGGGTCTTGTGGTCATTGAGACTAAGAGAAAAAAGAAAAAAAATAAAGGGCTTATAGCTTAGTAGAATTGCAAGTTTACTCGAGATTTCTATCACAAATTCCCTTAGTAACCAAATGCATTAGGATCAAGCGGATGTCCCATAAGATTACTGGAGGTATACATTGTTACATAATATTAAATTCAGATGGTTGGTTGTAATAATGAAAAGGTATTAGACGTTTGTACAGCTCATTTATCTCAGTTGCTTATAAAAAAATTTAAAATAAAATTGTTACGACTTTGTTCTGTAGTTCTTGTAGATTCGTTACGTGATGAAGGCCCTTGGACATGTAATATTCATTTGATTGTTCAATGAATAGAAATCTATGGAGAACATGTTTATGTTACTTTGATTATTATTTTGAATCTTTCTAAAGCTAGTCTATAAACAAGAGTTATATATATGCGACTGTGACCATCTTTTCAGATCAGATTCCAGTGACAATTTGTTACGCATTGTACCCTGCGATCTTCGAGTCTTTAGTCCTTGATCGTCTTTAGCCTTCACAAGCTCCTTGTAGCTTAAATACATCATTTTTCTATCATCATGGAGCTCTCTTTTCAAACATCTCGAAGAGGGCACTATTACAGTTTAAGAAGGTATGTTTCCACTCATTCTTATGTCGAAACCTGTTAATCACATGATTATTACAATAATTATTTTATAGTCTTATTGTCACATATTTGTATCATTCATCCATCAAAACTGTTTGTTGTTTCTTTTTTTTTTTTTGAAGGATAGAGTCTCGCTATTATTAATATTGAATAATAGGGAGACAAATCTTAATGTACATGAGGGTTATACAAAAAGTAATAAAGGGGAGGGGGATTAGCAGGCACACCCGAGCATCTCAATTAGGTTGATACCCCCCCTCACTACATCCAAAAAACGAAAATAAAACCCTTATACGAGGTTTATAATCTCATTACAAGGTAAAACTGTCTGTCCATTGTTTCTTTTAATAGATTTTGTTTCTTTGCAATTGTATTCATGAGAGATTTGTTTTCGATTATGAGATTTCTATTAGCAGATGAAGCAAATTGTTAAGGAAGGATTTTCATTTTATTCCGGTGCTTGTGTTGTTTTGTTTATTTGATCTTGTTTTTTTTAGTCACTTTTATGGTTCTTCAATCTTGTTCATTCTTCTTCAACCTCAATTGATTATATTTTCTGACATTAGAAGTAATTATAACAGAATTTATAATTGTTTCCAACTTTTTTTTTCAGTACATGGAGGTGGAAAAGTTCTAACTTCATACCTCTTTGTTGCTAAAAACATATTATATGCTAGTTGA

mRNA sequence

GCAAACATATTGGAGATGCGTTAATAATTTTTGAGATGATAAATGAGAAGGATATTTTCTCGTGGAACTCGATTATATCAGTTCATGAACAATGTGGTGATCATGATGGTACCTTGAGGCTTTTTGATAAGATGTTAGGTTCTGGGATTCTACCAGATTTGGTAACCATCACAACTGTGCTTCCAGCTTGCTCTCATTTGGCTGCGCTCATGCACGGTAGAGAAATTCATGGATACATGATCATTAATGGACTTGGAAAGGATGATGAAAATGGAGCTGTAGATAATTTACTTGTAAGTAATGCTGTTATGGATATGTATGCAAAATGCGGTAGTATGAACAATGCCCTCAAGATTTTTGATTCAATGAGCAAAAAGGACGTGGCATCATGGAATATCATGATTATGGGTTATGGTATGCATGGTTATGCTTTGGAGGCATTGGGTATGTTTTCTCAAATGTGTGAGGCTGAATTTAAGCCAAATGAAGTTACGCTTGTTGGAGTTCTATCAGCATGCAATCATGCAGGCTTTGTGTCTCATGGGCGTTTGTTTTTAGCTCAGATGGAATCTACATTTGGTGTTATTCCAACTATTGAGCATTATACGTGTGTAATTGATATGCTTGGTCGAGCTGGGCATTTAGAGGACGCGTATGAGATCGTGCAGAAAATGCCTATTCAAGCCAATCCCGTTGTTTGGAGGGCTTTATTGGGAGCATGTCGACTTCATGGGAATGCAGAGTTGGCAGAAATTGCAGCACGACAAGTACTGCAACTAGAACCAGAGCATTGTGGGAGTTATGTATTGATGTCCAATGTTTATGGAGTTATAGGTCGATACGAAGAGGTGTTGGAGGTTAGAAAAACGATGAAGGAACAAAATGTCAAGAAGACACCTGGTTGTAGTTGGATTGAACTCAAGGATGGGGTGCATGTTTTCCGTACTGGAGATAGGACACATTCAGAATTGAATGCATTGACTAATCAACTATGTGATATTGGATTCATTTTAGATGAAGTTTTGAATTTATATTGAGATATGGTAACATGTACGATTGCATTAACCTCTCTTTTTCCAAAGATTGACGAGTAACAAGCATCAAAACTTGTACATTGATGAACTTACTTCGTCTTTTTGACAAGAGCGATTGGTAATCAAGCGGCAAAACTGGGTAATTGTAATAACCTTTTTCTTTGAAATGTGAGTCATTGATTAATTGATGCCTTCAGACAAATATCTTTGATTGCCTATCTCCTTGGTATTCATTTTACAAAAGAATGGGAGAGAAGAAAAGGAAAAAAACCCTCTCTCATTTACTTACGTGTTATAATTTCTCTCGCTCCTTGCTTGGTCACTTCTACATTTTTCTTCAAAGTGCAAGTACGTTCTTTTCCATCTCCCTGACTCAATGAGATCTCTCCAGTGCAAAGTTTCTTAGTTGAGTACAGTTTATCTTCAAGGATATGAATGAGTCACTGACAGAACTGATGGTCAGAGGTGGTGCCTTTTTGTGGCTATTTGCATTCATCCTCTCTCAACTATGGCCTTGTTCATATTGCTACACTCTTGCTTTTCTTTAAAGTTCTTTTCTTGAATCTCTTGGAATTACGAGGAGATTTTATTTGCATTATGATTGAGATATGCAAAGAGCCATTGTCATTGCCATTGCTTAATGCCGATCTCAAGAAGCTTTAGGAGGTATCTAATCGATCATTGGATCTTTTTAGCAGAAGATCTGTTGCATCAAGAATACAGGCAAGAAGTGGGAGTTGATAAAGCTCATTTATCTCAGTTGCTTATAAAAAAATTTAAAATAAAATTGTTACGACTTTGTTCTGTAGTTCTTGTAGATTCGTTACGTGATGAAGGCCCTTGGACATCTCCTTGTAGCTTAAATACATCATTTTTCTATCATCATGGAGCTCTCTTTTCAAACATCTCGAAGAGGGCACTATTACAGTTTAAGAAGATGAAGCAAATTGTTAAGGAAGGATTTTCATTTTATTCCGTACATGGAGGTGGAAAAGTTCTAACTTCATACCTCTTTGTTGCTAAAAACATATTATATGCTAGTTGA

Coding sequence (CDS)

ATGCCGATCTCAAGAAGCTTTAGGAGGTATCTAATCGATCATTGGATCTTTTTAGCAGAAGATCTGTTGCATCAAGAATACAGGCAAGAAGTGGGAGTTGATAAAGCTCATTTATCTCAGTTGCTTATAAAAAAATTTAAAATAAAATTGTTACGACTTTGTTCTGTAGTTCTTGTAGATTCGTTACGTGATGAAGGCCCTTGGACATCTCCTTGTAGCTTAAATACATCATTTTTCTATCATCATGGAGCTCTCTTTTCAAACATCTCGAAGAGGGCACTATTACAGTTTAAGAAGATGAAGCAAATTGTTAAGGAAGGATTTTCATTTTATTCCGTACATGGAGGTGGAAAAGTTCTAACTTCATACCTCTTTGTTGCTAAAAACATATTATATGCTAGTTGA

Protein sequence

MPISRSFRRYLIDHWIFLAEDLLHQEYRQEVGVDKAHLSQLLIKKFKIKLLRLCSVVLVDSLRDEGPWTSPCSLNTSFFYHHGALFSNISKRALLQFKKMKQIVKEGFSFYSVHGGGKVLTSYLFVAKNILYAS
Homology
The following BLAST results are available for this feature:
BLAST of CsGy4G017640.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy4G017640.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G017640.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G017640.1 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy4G017640CsGy4G017640gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy4G017640.1CsGy4G017640.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy4G017640.1.five_prime_UTR.1CsGy4G017640.1.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy4G017640.1.exon.1CsGy4G017640.1.exon.1exon
CsGy4G017640.1.exon.2CsGy4G017640.1.exon.2exon
CsGy4G017640.1.exon.3CsGy4G017640.1.exon.3exon
CsGy4G017640.1.exon.4CsGy4G017640.1.exon.4exon
CsGy4G017640.1.exon.5CsGy4G017640.1.exon.5exon
CsGy4G017640.1.exon.6CsGy4G017640.1.exon.6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy4G017640.1.CDS.1CsGy4G017640.1.CDS.1CDS
CsGy4G017640.1.CDS.2CsGy4G017640.1.CDS.2CDS
CsGy4G017640.1.CDS.3CsGy4G017640.1.CDS.3CDS
CsGy4G017640.1.CDS.4CsGy4G017640.1.CDS.4CDS
CsGy4G017640.1.CDS.5CsGy4G017640.1.CDS.5CDS
CsGy4G017640.1.CDS.6CsGy4G017640.1.CDS.6CDS