CsGy4G013230.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCCACTGCTTTCCATTCCCATCTCTTCTTCTTCTTCTTCTTTTTCTTCTTACCCCTTCTTTTACCGTTGCTCAGGCAACAAGCCCAAATATAACTTTACGCAAATCTCTCACTGCTCGTTCTAGCGATTCCTTCTGGTCCTCTGCTTCTGGTGATTTTGCTTTCGGTTTTCGTCAAGCTGTAGGGGGAGACTATTTGTTAGCAATTTGGTTCAACAAAATTGATGAAAAAACCGTCGTTTGGTCTGCTAATCGGGATAAATTGGCGCCGGGGGGTTCCACCGTTGTACTTACAACAAGTGGTCAACTCATCCTCAACAACCCTGCCGGCAAGCAAATCTGGTCTTCAACTTCTACGGCTCCTAATAAGTCTGTTTCCTCTGCGGTCCTTCTTGATAATGGAAATTTCATTCTCGCTGCTAACGATTCTGAAATTGTTTGGCAAAGCTTCGATGACCCAACCGATACGATTTTACCGTCACAGATTCTTAAGAAGGGAAACAAACTGGTTGCTTCTTATTCAGAAACGAATTACTCAAGTGGGAGATTTGAATTTTATATGCAAACTGATGGGAATCTTTTGCTTTATATAAGAAATTTTCCTTACGATGCAATAAGTAACTATTACTGGTCAACTGACACTGTGAACTTCGGCTTTCAAGTCGTCTTCAACCTCTCTGGTTCTATTGTTCTCATCGATGAGAATAAAGCCATTCTCAACACTCTCTCATCAAATAATCCCACAGCTCAAAGTTTCTACCAGCGAGCAATTTTGGAACATGATGGGGTTTTCAGACATTATATTTACCCAAGGGGTGGCACTGGAAGAAATTCATCTTGGCCTAAAGCTTGGTCGATATCGAAATCCATTCCTTCCAACATCTGTATGACAATTGGTCAAAGTTCGGACGGTGGAGTTTGTGGGTTCAATAGCTACTGCAAGCTTGGGGATGATCAAAAGCCATTTTGCAGTTGTCCAGAAGGGTATGTCTTGTTTGATCCAAATGATGTAACACAAAGTTGTAAACCCAATTTTGTTCCTCAAAGCTGTGCGTTTCCTGAACTTGATGACTTTGATTTTGTTTCTTTGGACAATTCGGATTGGCCGCAATCTGATTACGGTGATTACGGCCATAACATACCAGTCAATGAAGATTGGTGCAGAAACGAATGTTTAAACGATTGTTTTTGTGTAGCAGCCACTTTTAGAGATGGGAATTGTTGGAAGAAGAAGTTCCCACTTTCATTTGGGAGAATGGATTATAGCGTGGGAGGAAAAGCTCTTATCAAAGTCAGGAGACGCAATTCAACTCTGCAATCTCGAAATCTTGACAAGAATTGCAATAACGAAACTAAGATAATCATTGGATCAATTTTGTTAGGAAGCTTATTCCTTAATATCCTCTTATTGCTACTCACTTTATTGATCGGCTGTCGATTCAGCAAAAGGAAATTAAAGTTTAATGGAGGAGACCCTTTCATTTTAGGTGTGAATCTAAGAGCTTTTAGCTATGAAGAGCTGAACAAAGCCACTAAGGAATTCAGAGATCAACTGGGAAGTGGTGCATTTGCTACTGTTTATAAAGGGACTCTTGGTTCTGTTGATGACAACAACTTGGTGGCAGTTAAAAAGTTGGAGAATATAGTGAGTGAAGGATCAGGAGAGAATGAATTTAAAGCCGAAGTACGTAAGTGCTATTGCTCGAACAAACCATAAGAATTTGGTTAAGTTAGTAGGTTTTTGTAACGAAGGAGAACACAGAATGTTGGTTTATGAGTTCATGGAAAACGGGTCTCTTGCAAATTTTGTTTTTAAGCCTTCAAAACCTACCTGGTATACAAGAATTCAGCTTGTTTTAGGAATTGCAAGAGGGTTAAGTTACTTACATGAAGAGTGCAGTACTCAGATCATTCATTGTGATATCAAGCCACAAAACATCCTTCTTGATGATAGATATGGTGCAAAAATTTCAGATTTTGGATTGGCTAAACTTCTGAAGAAAGATCAAACACGAACGACGACCGCAATTAGAGGAACAAAAGGGTATGTGGCTCCTGAATGGTTTAGAAGCTTGCCAATTACAGTGAAGGTTGATGTTTATAGCTTTGGGATAATGTTATTGGAGATGATCTGTTGTAGAAAGAATTTTGAAATGGAAACAGAAGATGAAGATGAAAGGATACTGAGTGATTGGGCTTATGATTGTATGAATGAAGGGAAAATGGAGAAGTTGATAAGAGAAGATGAAGAAGGAAGGAGTGATATGAAGAGAGTGGAGAGATTTGTTAAGATTGGAATATGGTGTATTCAGGAGGATCCATCGCTAAGGCCATCCATGAAGAAAGTGATACAAATGCTTGAAGGTGTAGTTGAAGTTTCAACTCCTCCCGATCCATCTTCATTTATCAGTGCTATTAATTAAGGAATAGCATTGTCTCTTTCCCTTCTTCCATTGTTATGTATAATCCAATGTCTCAGCTGCATCATCATATAGTCACATACATCTTACTATCTGGCATTAGGTAAAATTTGCAATTGCCAAATTATTTCTATGTAATTTTAAATTGAGATTAACTAATTTGTGATCTTTATCTAATTGTTGGATTGTATTTAAAAAAAAGTTAAGGAGGTTGGCTAGAAGTAAATGGAAGAGTTTATTGAAAAGTTGAGCTAACTCATCTCATGTCTCCTTACAATTTATTATTCTTATTTGACTGTATCTCATAACATTTAATTGAAGAACCCAAGTTGACTACAAATTTCAAGTCTTTCAACTGTCCCATTTTTCTCCCATTAATAATTCCTTCATCATTCCTTTAAATTTACATTTAGCATTTAGATTAGACCACCCCACACTTGGACAAGACTAGAGTTTGAAATATTGACGACGATGAAAGTATCAAGGTCACGAATTTATGAAAATAATCACATAGATGAAAAGTTCGATAAAAAATTATGAAAATTGTTATAATTTGTTAATGAAACTTAGACGGTAATTTAGTTAGACTATAGTGAACGTTTTTAATAATTTTAATCTAAGTAAGATTATTTATATATTTACCATCAAAGAAAATTGGGTGTACTTTTATCACAATTTTTTTTTGCTATTTTTGTATTTTTTTAAAAAACAGTTGTAAGACGTAG ATGGCTTCCCACTGCTTTCCATTCCCATCTCTTCTTCTTCTTCTTCTTTTTCTTCTTACCCCTTCTTTTACCGTTGCTCAGGCAACAAGCCCAAATATAACTTTACGCAAATCTCTCACTGCTCGTTCTAGCGATTCCTTCTGGTCCTCTGCTTCTGGTGATTTTGCTTTCGGTTTTCGTCAAGCTGTAGGGGGAGACTATTTGTTAGCAATTTGGTTCAACAAAATTGATGAAAAAACCGTCGTTTGGTCTGCTAATCGGGATAAATTGGCGCCGGGGGGTTCCACCGTTGTACTTACAACAAGTGGTCAACTCATCCTCAACAACCCTGCCGGCAAGCAAATCTGGTCTTCAACTTCTACGGCTCCTAATAAGTCTGTTTCCTCTGCGGTCCTTCTTGATAATGGAAATTTCATTCTCGCTGCTAACGATTCTGAAATTGTTTGGCAAAGCTTCGATGACCCAACCGATACGATTTTACCGTCACAGATTCTTAAGAAGGGAAACAAACTGGTTGCTTCTTATTCAGAAACGAATTACTCAAGTGGGAGATTTGAATTTTATATGCAAACTGATGGGAATCTTTTGCTTTATATAAGAAATTTTCCTTACGATGCAATAAGTAACTATTACTGGTCAACTGACACTGTGAACTTCGGCTTTCAAGTCGTCTTCAACCTCTCTGGTTCTATTGTTCTCATCGATGAGAATAAAGCCATTCTCAACACTCTCTCATCAAATAATCCCACAGCTCAAAGTTTCTACCAGCGAGCAATTTTGGAACATGATGGGGTTTTCAGACATTATATTTACCCAAGGGGTGGCACTGGAAGAAATTCATCTTGGCCTAAAGCTTGTTGTAAGACGTAG ATGGCTTCCCACTGCTTTCCATTCCCATCTCTTCTTCTTCTTCTTCTTTTTCTTCTTACCCCTTCTTTTACCGTTGCTCAGGCAACAAGCCCAAATATAACTTTACGCAAATCTCTCACTGCTCGTTCTAGCGATTCCTTCTGGTCCTCTGCTTCTGGTGATTTTGCTTTCGGTTTTCGTCAAGCTGTAGGGGGAGACTATTTGTTAGCAATTTGGTTCAACAAAATTGATGAAAAAACCGTCGTTTGGTCTGCTAATCGGGATAAATTGGCGCCGGGGGGTTCCACCGTTGTACTTACAACAAGTGGTCAACTCATCCTCAACAACCCTGCCGGCAAGCAAATCTGGTCTTCAACTTCTACGGCTCCTAATAAGTCTGTTTCCTCTGCGGTCCTTCTTGATAATGGAAATTTCATTCTCGCTGCTAACGATTCTGAAATTGTTTGGCAAAGCTTCGATGACCCAACCGATACGATTTTACCGTCACAGATTCTTAAGAAGGGAAACAAACTGGTTGCTTCTTATTCAGAAACGAATTACTCAAGTGGGAGATTTGAATTTTATATGCAAACTGATGGGAATCTTTTGCTTTATATAAGAAATTTTCCTTACGATGCAATAAGTAACTATTACTGGTCAACTGACACTGTGAACTTCGGCTTTCAAGTCGTCTTCAACCTCTCTGGTTCTATTGTTCTCATCGATGAGAATAAAGCCATTCTCAACACTCTCTCATCAAATAATCCCACAGCTCAAAGTTTCTACCAGCGAGCAATTTTGGAACATGATGGGGTTTTCAGACATTATATTTACCCAAGGGGTGGCACTGGAAGAAATTCATCTTGGCCTAAAGCTTGTTGTAAGACGTAG MASHCFPFPSLLLLLLFLLTPSFTVAQATSPNITLRKSLTARSSDSFWSSASGDFAFGFRQAVGGDYLLAIWFNKIDEKTVVWSANRDKLAPGGSTVVLTTSGQLILNNPAGKQIWSSTSTAPNKSVSSAVLLDNGNFILAANDSEIVWQSFDDPTDTILPSQILKKGNKLVASYSETNYSSGRFEFYMQTDGNLLLYIRNFPYDAISNYYWSTDTVNFGFQVVFNLSGSIVLIDENKAILNTLSSNNPTAQSFYQRAILEHDGVFRHYIYPRGGTGRNSSWPKACCKT
BLAST of CsGy4G013230.1 vs. NCBI nr
Match: KGN54147.1 (hypothetical protein Csa_4G289650 [Cucumis sativus]) HSP 1 Score: 559.7 bits (1441), Expect = 5.8e-156 Identity = 280/285 (98.25%), Postives = 282/285 (98.95%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. NCBI nr
Match: KGN54150.1 (hypothetical protein Csa_4G290170 [Cucumis sativus]) HSP 1 Score: 510.0 bits (1312), Expect = 5.3e-141 Identity = 258/285 (90.53%), Postives = 267/285 (93.68%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. NCBI nr
Match: XP_011653581.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Cucumis sativus]) HSP 1 Score: 510.0 bits (1312), Expect = 5.3e-141 Identity = 258/285 (90.53%), Postives = 267/285 (93.68%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. NCBI nr
Match: XP_008449746.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 [Cucumis melo]) HSP 1 Score: 480.7 bits (1236), Expect = 3.5e-132 Identity = 244/285 (85.61%), Postives = 257/285 (90.18%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. NCBI nr
Match: XP_011654366.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1, partial [Cucumis sativus]) HSP 1 Score: 440.7 bits (1132), Expect = 4.0e-120 Identity = 223/285 (78.25%), Postives = 248/285 (87.02%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TAIR10
Match: AT5G60900.1 (receptor-like protein kinase 1) HSP 1 Score: 148.7 bits (374), Expect = 5.6e-36 Identity = 97/250 (38.80%), Postives = 140/250 (56.00%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TAIR10
Match: AT2G41890.1 (curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein) HSP 1 Score: 85.9 bits (211), Expect = 4.5e-17 Identity = 82/271 (30.26%), Postives = 124/271 (45.76%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TAIR10
Match: AT3G12000.1 (S-locus related protein SLR1, putative (S1)) HSP 1 Score: 84.0 bits (206), Expect = 1.7e-16 Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TAIR10
Match: AT1G65790.1 (receptor kinase 1) HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16 Identity = 66/189 (34.92%), Postives = 103/189 (54.50%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TAIR10
Match: AT4G21380.1 (receptor kinase 3) HSP 1 Score: 82.8 bits (203), Expect = 3.8e-16 Identity = 58/192 (30.21%), Postives = 102/192 (53.12%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. Swiss-Prot
Match: sp|Q25AG3|LERK3_ORYSI (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK3 PE=3 SV=2) HSP 1 Score: 186.0 bits (471), Expect = 5.8e-46 Identity = 114/292 (39.04%), Postives = 161/292 (55.14%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. Swiss-Prot
Match: sp|A2XQD3|LERK2_ORYSI (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK2 PE=2 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.7e-45 Identity = 110/281 (39.15%), Postives = 156/281 (55.52%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. Swiss-Prot
Match: sp|Q0JEU6|LERK3_ORYSJ (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK3 PE=3 SV=2) HSP 1 Score: 183.3 bits (464), Expect = 3.7e-45 Identity = 113/292 (38.70%), Postives = 160/292 (54.79%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. Swiss-Prot
Match: sp|Q7FAZ3|LERK1_ORYSJ (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK1 PE=2 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 4.6e-43 Identity = 117/276 (42.39%), Postives = 159/276 (57.61%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. Swiss-Prot
Match: sp|A0A075F7E9|LERK1_ORYSI (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK1 PE=1 SV=2) HSP 1 Score: 172.6 bits (436), Expect = 6.6e-42 Identity = 116/276 (42.03%), Postives = 156/276 (56.52%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TrEMBL
Match: tr|A0A0A0L0M2|A0A0A0L0M2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G289650 PE=4 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 3.9e-156 Identity = 280/285 (98.25%), Postives = 282/285 (98.95%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TrEMBL
Match: tr|A0A0A0KWZ6|A0A0A0KWZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G290170 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 3.5e-141 Identity = 258/285 (90.53%), Postives = 267/285 (93.68%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TrEMBL
Match: tr|A0A1S3BNP5|A0A1S3BNP5_CUCME (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Cucumis melo OX=3656 GN=LOC103491537 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 2.3e-132 Identity = 244/285 (85.61%), Postives = 257/285 (90.18%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TrEMBL
Match: tr|A0A0A0KX82|A0A0A0KX82_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G290150 PE=4 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 1.0e-116 Identity = 218/285 (76.49%), Postives = 244/285 (85.61%), Query Frame = 0
BLAST of CsGy4G013230.1 vs. TrEMBL
Match: tr|B9RI66|B9RI66_RICCO (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis OX=3988 GN=RCOM_1576610 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 5.5e-78 Identity = 151/278 (54.32%), Postives = 193/278 (69.42%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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