CsGy4G000840.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCGATTCAACACACCACCATCAACACTAATGGCATCAAAATGCATATTGCCTCAATAGGCAATGGCCCCGTCGTTCTTCTTCTTCATGGCTTCCCCGAGCTGTGGTACTCATGGCGCCACCAGCTTCTCTACCTTTCCTCCGTCGGGTATCGAGCCATCGCGCCGGACCTCCGAGGCTATGGCGACACGGACTCCCCTGGATCGCATACTTCCTACACCGCCCTCCATATTGTCGGCGATTTGATTGGGGCTTTGGATGAGCTTGGGATTGAGAAGGTGTTTCTTGTAGGCCATGATTGGGGGGCGATCATTGCTTGGTACTTTTGCTTGTTCAGGCCTGAAAGAATCAAAGCCTTGGTGAATCTGAGCGTCCAGTTCTTCCCTAGAAATCCGGCTATTTCTTTCATCCAGCGTTTCAGAGCTGCGTATGGTGATGATTTCTATATGTGCAGGTTTCAGGTGAATCTGAACTTTGATTAATTTCTAACTATGGATTTAATTAGGGATATTCCCTTCTGATTCTGCTCCTAATTTCGATTAATGTCTATGCTTGTATTTTAGTTGCTTATTAGTTGGATGAATGATGTTATCAATTTGCTTAGTTTTGGTTTTCTGGTGTGTAGATTGACTCTGTTCAGTCTCACTCAGACGCACAATCGAAGTTGCAAAATACCGATTGTGTTCAATTAAAGTACTGTTGATGAATCAAAGCTTAAAAGATTGTGTTCTTAACATGTTCATTGTAAAGTTCTTTATAGTTTTTTGGCTGTTTAACTGTTGTATCTTACCATTCTCCCATGTAAATGATTGCAAAATGTCCTGAGAAAGACTTTGATAGAAGTTACTGAGTTCATTTAATTGGAAGATTCCTTCTTGCTAATACATTCAATTAACAAATAATACTGAAACAATTTTCACCTTTTTTTGTGGTTCTCTCTTAATTCATCAAGTTGCTGATTAGAGGGATAGCCCCATCTAAATTTTGTTTGATTCTCTGTTTTGATCAACAATTTTCTCCAAGTTGGAAAGCCATGTCGAGCTTTTCTGAGTGTAAAGTCTTTCTATCGAACAAGAAAGCTGAAATTATAGCAATTATTGGTTTGGACCTTTTCTTTTTTTACTAATAAAACAATTTTTCATATCATTTATGTAATCGTAGGGGATGCTCATGTAACCAGGAAAAATACAAATGAAGTGGCTGTGGTTTCTAGAAATTCATGGCATCTAAAACATGTGTAGACTGATTTCTAATAGGTTCCAGGAGAGGCGGAAGCAGATTTTGCCTGCATTGACACTGCTCAACTGTTCAAGACAACACTGTCTACTAGAAGTACAGAGGCACCTTGTTTGCCTAAAGAATACGGATTTCGCGCCATCCCACCGCCAGAAAACCTTCCTTCTTGGTTGACAGAAGAAGATATCAACTATTATGCTGCCAAATTCAAGGAGACAGGCTTCACTGGAGCATTGAACTACTATCGCGCTTTTGACTTGTAAGTCACGTTTGTTTACATCCGAGTTCGACGTTAATATTATTAGATAACATGAGGTTTCAACTAAAGAACAATTGGTAACAGAAAAGTAATATATCTTATAAACATTTTGAGACCTTTTGATTTTTCCAACTTCCAATCCTCAACACATGACTCCGTCTGACACACTTTTCTGTGTTTCATTTTCAACAACCGTTTCGTGTTTTGACATTGAATAGTTGTTTTATTCGCATTTTCATAGCAAGAAACTGTTGAGTGGTGAATTGTTTCTGTTTTTCCTCACTTCGGAATGCATTTCGTTAGCTGTATCTTGTGGAAGGCTATGGAGTTTAATGGATGTTTTGTTGCACAACTTGGGAGCTTACGGCGCCATGGACGGGAGTGCAGATTCAGGTACCCGTGAAATTCATTGTAGGCGATTTGGATATAACTTACCATTTTAAAGGAGCCAAGGAATATATCCACGATGGCGGGTTCAAAAGGGACGTGCCATTGCTGGAGGAAGTAGTAATAGTGAAAAATGCTGGCCACTTTGTCCATGAAGAAAAGCCACATGAAATCAATACTCACATTCATGACTTCATCAAGAAATTTTGAACAACATTTCCATTGCCAACTCATGTTAATTTCTGTTGGTGGGTCTTGAAACTTTTGATACTTTCAGCTTGTTTATCATTTTGTTAAGCCTTCGGAAAGCAAGCAGGAGCAGGAACAGTCAATTGTGTGTGTTTGGAATATTTTTCTTAATTTATAGTTAAACAATGGGATTTTGAATTTCTCAATACTAAATTTTCATCTCTATTTTTCAAATTATTAATCAACTTCTATACTAACTTTTCAACTTTTACATTTTAGCATAGATAGGTCTCCACTAAATTGTTTAATCATAATTTGTCATTTTTGTCATGTAAAAATTCTTTACTCAAATATTTTAATTCACTTTTTATGTAATGTGATAGTACAATTCATAAAGATTACATCTAAGATGGATCCGAGTATACCTTTATAAAATAATAGAACTTCTACGTGTTTTAACTCATTGGTATTGTATTTTTTATGATGTTGCAAAGAAAAAAAAGGGTCAAAATTAAAATTTTAGTCTTAAATTTTACAAGGTAATAACACATTTGAATAAAGAAAAATTGTTTCAAATTTTAAAAGAAAAATCTAATTTTGATGTAAATCTTAATTGCATTCATTGTATAAACTAATTTGAATAAAGAAAAATGGTTTCAAACCTAAACATAATTTTAAATCATTATGGCTTAACTTTGGTGCATTAGAAGTTTTAATTAATTCATTTATATTATATCAATAATCACTGAAAAATCCAATATATATATCAATAATCATTAAAAATCTAATTCAAATTTAACATCAATGAATCAACATTTATATATATATATATATCAATTACTTTATGAAAAAACAATATATATCAATGGCATGATAAAACATTTTCTTTTTTTAAGAAATGGAATTCATTAGGGAGAAAGTGGGATGAGTTTTGATCCATAGAATTGTTGTGTTCTATTTTTAGGTCACGAAACTAAACGTAAACAAATTAAGCTGAATAATCGGACAATGTGTGTCTAA ATGGATGCGATTCAACACACCACCATCAACACTAATGGCATCAAAATGCATATTGCCTCAATAGGCAATGGCCCCGTCGTTCTTCTTCTTCATGGCTTCCCCGAGCTGTGGTACTCATGGCGCCACCAGCTTCTCTACCTTTCCTCCGTCGGGTATCGAGCCATCGCGCCGGACCTCCGAGGCTATGGCGACACGGACTCCCCTGGATCGCATACTTCCTACACCGCCCTCCATATTGTCGGCGATTTGATTGGGGCTTTGGATGAGCTTGGGATTGAGAAGGTGTTTCTTGTAGGCCATGATTGGGGGGCGATCATTGCTTGGTACTTTTGCTTGTTCAGGCCTGAAAGAATCAAAGCCTTGGTGAATCTGAGCGTCCAGTTCTTCCCTAGAAATCCGGCTATTTCTTTCATCCAGCGTTTCAGAGCTGCGTATGGTGATGATTTCTATATGTGCAGGTTTCAGTTGCTTATTAGTTGGATGAATGATGTTATCAATTTGCTTAGTTTTGGTTTTCTGGTTCCAGGAGAGGCGGAAGCAGATTTTGCCTGCATTGACACTGCTCAACTGTTCAAGACAACACTGTCTACTAGAACTGTATCTTGTGGAAGGCTATGGAGTTTAATGGATGTTTTGTTGCACAACTTGGGAGCTTACGGCGCCATGGACGGGAGTGCAGATTCAGGTCACGAAACTAAACGTAAACAAATTAAGCTGAATAATCGGACAATGTGTGTCTAA ATGGATGCGATTCAACACACCACCATCAACACTAATGGCATCAAAATGCATATTGCCTCAATAGGCAATGGCCCCGTCGTTCTTCTTCTTCATGGCTTCCCCGAGCTGTGGTACTCATGGCGCCACCAGCTTCTCTACCTTTCCTCCGTCGGGTATCGAGCCATCGCGCCGGACCTCCGAGGCTATGGCGACACGGACTCCCCTGGATCGCATACTTCCTACACCGCCCTCCATATTGTCGGCGATTTGATTGGGGCTTTGGATGAGCTTGGGATTGAGAAGGTGTTTCTTGTAGGCCATGATTGGGGGGCGATCATTGCTTGGTACTTTTGCTTGTTCAGGCCTGAAAGAATCAAAGCCTTGGTGAATCTGAGCGTCCAGTTCTTCCCTAGAAATCCGGCTATTTCTTTCATCCAGCGTTTCAGAGCTGCGTATGGTGATGATTTCTATATGTGCAGGTTTCAGTTGCTTATTAGTTGGATGAATGATGTTATCAATTTGCTTAGTTTTGGTTTTCTGGTTCCAGGAGAGGCGGAAGCAGATTTTGCCTGCATTGACACTGCTCAACTGTTCAAGACAACACTGTCTACTAGAACTGTATCTTGTGGAAGGCTATGGAGTTTAATGGATGTTTTGTTGCACAACTTGGGAGCTTACGGCGCCATGGACGGGAGTGCAGATTCAGGTCACGAAACTAAACGTAAACAAATTAAGCTGAATAATCGGACAATGTGTGTCTAA MDAIQHTTINTNGIKMHIASIGNGPVVLLLHGFPELWYSWRHQLLYLSSVGYRAIAPDLRGYGDTDSPGSHTSYTALHIVGDLIGALDELGIEKVFLVGHDWGAIIAWYFCLFRPERIKALVNLSVQFFPRNPAISFIQRFRAAYGDDFYMCRFQLLISWMNDVINLLSFGFLVPGEAEADFACIDTAQLFKTTLSTRTVSCGRLWSLMDVLLHNLGAYGAMDGSADSGHETKRKQIKLNNRTMCV
BLAST of CsGy4G000840.1 vs. NCBI nr
Match: XP_004152242.1 (PREDICTED: bifunctional epoxide hydrolase 2-like isoform X1 [Cucumis sativus] >KGN52825.1 hypothetical protein Csa_4G001920 [Cucumis sativus]) HSP 1 Score: 369.4 bits (947), Expect = 9.5e-99 Identity = 180/199 (90.45%), Postives = 181/199 (90.95%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. NCBI nr
Match: XP_011652941.1 (PREDICTED: bifunctional epoxide hydrolase 2-like isoform X2 [Cucumis sativus]) HSP 1 Score: 369.4 bits (947), Expect = 9.5e-99 Identity = 180/199 (90.45%), Postives = 181/199 (90.95%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. NCBI nr
Match: XP_008454322.1 (PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis melo]) HSP 1 Score: 361.3 bits (926), Expect = 2.6e-96 Identity = 175/199 (87.94%), Postives = 178/199 (89.45%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. NCBI nr
Match: XP_022934346.1 (uncharacterized protein LOC111441539 [Cucurbita moschata]) HSP 1 Score: 350.5 bits (898), Expect = 4.6e-93 Identity = 169/199 (84.92%), Postives = 174/199 (87.44%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. NCBI nr
Match: XP_022984062.1 (uncharacterized protein LOC111482485 [Cucurbita maxima]) HSP 1 Score: 350.5 bits (898), Expect = 4.6e-93 Identity = 168/199 (84.42%), Postives = 175/199 (87.94%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TAIR10
Match: AT4G02340.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 258.8 bits (660), Expect = 3.3e-69 Identity = 115/198 (58.08%), Postives = 148/198 (74.75%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TAIR10
Match: AT3G05600.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 217.6 bits (553), Expect = 8.4e-57 Identity = 105/204 (51.47%), Postives = 133/204 (65.20%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TAIR10
Match: AT4G15955.3 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 216.1 bits (549), Expect = 2.4e-56 Identity = 102/163 (62.58%), Postives = 124/163 (76.07%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TAIR10
Match: AT2G26740.1 (soluble epoxide hydrolase) HSP 1 Score: 212.6 bits (540), Expect = 2.7e-55 Identity = 105/203 (51.72%), Postives = 137/203 (67.49%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TAIR10
Match: AT2G26750.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 206.5 bits (524), Expect = 1.9e-53 Identity = 100/202 (49.50%), Postives = 138/202 (68.32%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. Swiss-Prot
Match: sp|P34913|HYES_HUMAN (Bifunctional epoxide hydrolase 2 OS=Homo sapiens OX=9606 GN=EPHX2 PE=1 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 4.4e-31 Identity = 52/130 (40.00%), Postives = 85/130 (65.38%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. Swiss-Prot
Match: sp|I6YGS0|EPHA_MYCTU (Epoxide hydrolase A OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ephA PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 9.9e-31 Identity = 65/158 (41.14%), Postives = 94/158 (59.49%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. Swiss-Prot
Match: sp|Q6Q2C2|HYES_PIG (Bifunctional epoxide hydrolase 2 OS=Sus scrofa OX=9823 GN=EPHX2 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 6.4e-30 Identity = 50/131 (38.17%), Postives = 86/131 (65.65%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. Swiss-Prot
Match: sp|P80299|HYES_RAT (Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.4e-29 Identity = 50/131 (38.17%), Postives = 83/131 (63.36%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. Swiss-Prot
Match: sp|P95276|EPHB_MYCTO (Epoxide hydrolase B OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1988 PE=1 SV=2) HSP 1 Score: 129.0 bits (323), Expect = 7.1e-29 Identity = 58/130 (44.62%), Postives = 78/130 (60.00%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TrEMBL
Match: tr|A0A0A0KT70|A0A0A0KT70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001920 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 6.3e-99 Identity = 180/199 (90.45%), Postives = 181/199 (90.95%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TrEMBL
Match: tr|A0A1S3BZJ8|A0A1S3BZJ8_CUCME (bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494757 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.7e-96 Identity = 175/199 (87.94%), Postives = 178/199 (89.45%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TrEMBL
Match: tr|A0A0A0KY86|A0A0A0KY86_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001830 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 2.6e-84 Identity = 152/199 (76.38%), Postives = 165/199 (82.91%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TrEMBL
Match: tr|A0A1S3BXV2|A0A1S3BXV2_CUCME (bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494764 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 4.5e-81 Identity = 150/204 (73.53%), Postives = 162/204 (79.41%), Query Frame = 0
BLAST of CsGy4G000840.1 vs. TrEMBL
Match: tr|A0A2I4HN70|A0A2I4HN70_9ROSI (bifunctional epoxide hydrolase 2-like OS=Juglans regia OX=51240 GN=LOC109019700 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 4.1e-74 Identity = 132/196 (67.35%), Postives = 152/196 (77.55%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
|