CsGy3G039170.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G039170.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Leucine-rich repeat protein kinase family protein
Location	Chr3 : 36885778 .. 36890052 (+)
Sequence length	1277

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGCTTTCCCAAGTCGTCTATCAAGTCCACGTTTGGGCTTATTAATTGGTTTACTTATACGACGACCTTGACCTCACAACGCTTTGCCTACCAGAAATTACATAGAAAAAGCTTTCATTTAGTTTCTATCTCTTGATCTTTGTTTTACATCCAAATCAAAACCCTTCGATACAACTTGTCGAAACATGAAAGACAGCCTCGTATTACCCGCAGTTTTCTCGTCGGCGATTCGGAAATTAATTGCCCCGAAATCTCGGTCCCTTCTGGTGGAGGTGAAACTGCGCCGTTTTTCATACGTCGAGTTGGTGAAGATGACTAATAACTTCCAGCGACGCATTGGTAAGGGAGGATTTGGAAACATCTACCATGGAGAACTCGACGGCGCTCCGGTCGCCGTCAAGTTATATCGGAACGAAAATCCATCGGTTGCCGCCCAATTTGAAAGCGAGGTCAGCCGTATATATGTTTACACTGCTTTAATACTTTTTCTTCTGTTTCATTTAGGTTTTAGTCCTTAATTGAGATTTAATTTCCTTTCGTTTCTTCAAAATTTCCTAATTACTTGGGTGTTGTTGGTTCACTATTTATCTTATTGTTTTTTTTAAGAAAGTCTTTCAAAGTTACGTGGACGGACGACTATTTAGCAATAATAATTAAGGATATAACAACGTTTTAAAAAAATTGCAAATATAACAAAACTATCACTGATACACTTGTATCGCTCATAGATTTCATATGATATATCAGTGATAGACCAATATTTGCAACATGGTCTATCAGTGATAGACTTATATCAAGAATTTGACAAATTTTGCTATATTTGCAAATTTTTTAAAATTATGCTATATACTTAATTAATTTGAATTTAATTGTTAAATTTGCAACTATCCCATATATAAATGGTGTGAATCTCTAAAATTTTGTCACGTTATATTATATATTATTTAATCAAGTTTTCAAAAATTAAACCAGAATTTTAAAAACTAAAAAATAATGGAAAGCATGATAAGAAATTGCAAGAAAGTGAACAAAACGGTTATTTATCGAGTGGATTTTGACGCCCCTAAATTCGAATCAAATAATTTACTGAATCACACAATAAGAACTAAGAACTAGTCTTAGTGGCAAATTCGAGTCAAACACGTGAAGCATGTAAATATTCTATAGCAAATTGTTACCAACTTAGGAAGATATATACTACTTAATATAATCAAAAGCATTCACAATAAAGTTTACATATATAATCATCCCAATCAAAATTTGAACTATCAATATATTAAATTTAATTCATATCTCACGAAGGCGTGAATTTAAGAGATTGCAACAAACTCAAACTAAGAGAGAGTACCTTAGTCTCACTCATCCGCACGTCGAATGAGGAGGAAATGTTCGAGTGCATAAAACTAGACTAAAAACCTTAAAAGTTTGAGAGAAATTACATGTATTACATTTAGAATGGTTAGACTGGAAGTTCCAATGACTTAGGTGGTAGAAATATCTTTTTTAAATTCATGATGGTATCACAGTGCTGGCGAGACTATGGGTGCGTTAGGGTCAAAGTACCGCATTGTTGTGTACTGTATTTTGCAGACAGTAATGCTACTGCCTTACCACGCCACACATAACGTTGTAGGCGTTGCAAGACCTATTTTCTTTGCTCTTTGCCTCAGTTGATGGCACTTGAATTAGTTTTTGCCGAATTAAAACTTTAAGTCGACATCAACATCCAATTATACCCTTGAATTATTTGAAACCTATAAAATATCCAAATAAGAAGATAAAGTAATGGAACGATCCAAACATGAATTTGGTGTTTAATTACTCTCAAGATTCCAATTAATTTAAAAAAAAACACTTTTAAAATAATTGTTTTAAGTTGTTGAAACTTGGCTGAGACTTTTAAAACATGGGTAGAAAGATCATGTATAGTAAAATGAGAAATTTAGATGAAGATGAAGAATAGGTATGTTTAGAGGTCCTTTAATTCAATTTTAAAAATTAAATAAAGAAAAAACAAAATAGTTAGAAAATGAGTCATACTCTCACTTATATTTAATTAAGGAAGGTACTAAATTAAAGTTTGCCATTAAACAAAAAGTCATTAATTATATTAATCCTAAAAAGAGTTTGAATTGAAACTTGTTAAACAAATATTGAAGTGTACTAGAGTGTTTATATAATTATATTTATCACCTATTAAAATCCTTTGAATTTGATTGATGATATATTTTATGTGGTATTGTTGGTAAAGGTGTTATGTGCTCCTAAAAATGGATGTAATGTTATTTCACTACAACAAAATTTGATCTTTAATGTCAGTTTAAAACCGACATTAATGGTCTTTAGTGTCAGTTGGCAGCTGACATCTATGCTAGCGTTATTAAAGGTTTTTAATGTCATTTTTGCTTTGATGTCGGTTTAAAAACAACATCAAAAGCTTCATTAATGTCGGTTTAAAAATGACATTGAAAAATTCTTTTTATTTAATATTGATTTTTATTTCACTTATTTGACATTTTTTATTATAAATTTTAAGTTCATCCATAAGGTCAAATACATTGAATACATGACTCATCCACCTAAACACGTGTGTTCATCAATTTATCCCAAATCATAGGTTAATCTTCTCAACAAAGTTTATCACAAAAATTTGATCAAAGTGTTCGGATATTGCGACGAATCTACAAAATCCGCGTTGGTTTTTGAGTTCATGGCAAATGGAGACTTGAGGAAGAATCTTACAGGTTCAACTCGTATATTATCACTTTAGTTAATTTATTCAAATAATTCAATTGATCAATAACATGACTTCGTTCTATCATTTGTGTTGAGCTTTTTAATACAGGGAGTGGTTGTTCAAGTAAATTAACATGGGAACGAAGACTTAGAATCGCCATCGATATGGCAAAAGCTTTGGATTATCTACATGATGGCTGCGAGCCACCGATCATTCACAGAAATTTCAACAGTTCAAACATTTTATTGTCCAAAAATTTTGAAGTGAGGCTTTCTGACTTTGTTTTGGCCGTCAACTTTAATCCATCTCATGAGGGTGAATCTCATATGTCCAACGTTACTATTACTGGTACTCTAGGATACATGGACCCACAGTAAGATGCCAAAATCAACCTTAATATATAATATCTTTTTTTAGTGGAGAGAGATCTAATCTTCGACATCTAGAAAAGAAGATATCAATTATCATTGGGTTAAATTCATTTTGACGTCAAAACAACCTTAAATAACATTCTATTTTAGTTTATAAACCTTTCCTTCATCTAAATTTTGACTTTTGACAAATGTTTTTAAAGTTCAACCATGTTTTAAGAGAAAGTTTGTAGCACTTTGAGTGATGTGCAACATTTTAAATAGCGGTTCATTTTGGTTTTTATCATTTTTATTTTTAGTGTATAAACACTAATTTCTATATTGCAACAAATTTCTTTATTTTGTCTGTAAAAAAATTTCCAGTTGTTAGAGGAAAAAAAAACTTTTTCAAAGATATTTGTTTAGTTTCCAAAATTTGGCTAGCTTGGTTTTCGAAAACATTAGGGAAAAGTGAATAATAAAACAAAAAAATATTTAATTACCAATATGAAAGTAAAGTTTATAAGCTTATTTTTTATATGTATAAAAGAAATGAATGGACTTGCTACTTACCCCTCGTGGGTAGTTCTGTTTTACGTCTGGTGAGGTTTTGGAATTTTCACAGGTATTTGACAACAGGAATGTTGAGTACATGGGCAGATGTGTATGGATTTGGAGCTGTTTTAATGGAGATAATTGCAGGAAGACCAGCATACCAATATGGTGAGGATGGAGTTTTAACTCAATGGGTTAGCTCAATGTTTGGTAATGGGGAAATTGGAAGGATTATGGATCCAAAGTTGGAAGGAGATTTTGATGTAAACTCAGTGATGGAAGCACTAAATATTGCATTTGCTTGTTTATCTTGCAACTCCAATGATCGACCAACCATGGGTGAAGTGGTAACAAAACTTAAACTTTGCTTGCAAATGGAAACAGCTCGATTGGGTACACTCATTGAAGATTATTGAATCTCTTCACCTACTTTGATAGAATATTATATGATTGTATAACGTACATTAGCACTATCTCGTCATTGATTCTTGTTGCAAAATGACTGTCTCCTGATTGATTTGATTTCAAGTTGGTCTTTAATTGAATTTCAGCAACATGAACTTCATTTGAGGTTTTCTAGAACCTTGTTGTCTCCTTCACGGTTAGTTTCTTATGATGGCCATTTATTTCA

mRNA sequence

TGGAGCTTTCCCAAGTCGTCTATCAAGTCCACGTTTGGGCTTATTAATTGGTTTACTTATACGACGACCTTGACCTCACAACGCTTTGCCTACCAGAAATTACATAGAAAAAGCTTTCATTTAGTTTCTATCTCTTGATCTTTGTTTTACATCCAAATCAAAACCCTTCGATACAACTTGTCGAAACATGAAAGACAGCCTCGTATTACCCGCAGTTTTCTCGTCGGCGATTCGGAAATTAATTGCCCCGAAATCTCGGTCCCTTCTGGTGGAGGTGAAACTGCGCCGTTTTTCATACGTCGAGTTGGTGAAGATGACTAATAACTTCCAGCGACGCATTGGTAAGGGAGGATTTGGAAACATCTACCATGGAGAACTCGACGGCGCTCCGGTCGCCGTCAAGTTATATCGGAACGAAAATCCATCGGTTGCCGCCCAATTTGAAAGCGAGGGAGTGGTTGTTCAAGTAAATTAACATGGGAACGAAGACTTAGAATCGCCATCGATATGGCAAAAGCTTTGGATTATCTACATGATGGCTGCGAGCCACCGATCATTCACAGAAATTTCAACAGTTCAAACATTTTATTGTCCAAAAATTTTGAAGTGAGGCTTTCTGACTTTGTTTTGGCCGTCAACTTTAATCCATCTCATGAGGGTGAATCTCATATGTCCAACGTTACTATTACTGGTACTCTAGGATACATGGACCCACAGTATTTGACAACAGGAATGTTGAGTACATGGGCAGATGTGTATGGATTTGGAGCTGTTTTAATGGAGATAATTGCAGGAAGACCAGCATACCAATATGGTGAGGATGGAGTTTTAACTCAATGGGTTAGCTCAATGTTTGGTAATGGGGAAATTGGAAGGATTATGGATCCAAAGTTGGAAGGAGATTTTGATGTAAACTCAGTGATGGAAGCACTAAATATTGCATTTGCTTGTTTATCTTGCAACTCCAATGATCGACCAACCATGGGTGAAGTGGTAACAAAACTTAAACTTTGCTTGCAAATGGAAACAGCTCGATTGGGTACACTCATTGAAGATTATTGAATCTCTTCACCTACTTTGATAGAATATTATATGATTGTATAACGTACATTAGCACTATCTCGTCATTGATTCTTGTTGCAAAATGACTGTCTCCTGATTGATTTGATTTCAAGTTGGTCTTTAATTGAATTTCAGCAACATGAACTTCATTTGAGGTTTTCTAGAACCTTGTTGTCTCCTTCACGGTTAGTTTCTTATGATGGCCATTTATTTCA

Coding sequence (CDS)

ATGAAAGACAGCCTCGTATTACCCGCAGTTTTCTCGTCGGCGATTCGGAAATTAATTGCCCCGAAATCTCGGTCCCTTCTGGTGGAGGTGAAACTGCGCCGTTTTTCATACGTCGAGTTGGTGAAGATGACTAATAACTTCCAGCGACGCATTGGTAAGGGAGGATTTGGAAACATCTACCATGGAGAACTCGACGGCGCTCCGGTCGCCGTCAAGTTATATCGGAACGAAAATCCATCGGTTGCCGCCCAATTTGAAAGCGAGGGAGTGGTTGTTCAAGTAAATTAA

Protein sequence

MKDSLVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGAPVAVKLYRNENPSVAAQFESEGVVVQVN

Homology

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BLAST of CsGy3G039170.1 vs. NCBI nr
Match: XP_004146864.1 (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Cucumis sativus] >KGN59855.1 hypothetical protein Csa_3G850600 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 8.6e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MKDSLVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIY 60
          MKDSLVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIY
Sbjct: 1  MKDSLVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIY 60

Query: 61 HGELDGAPVAVKLYRNENPSVAAQFESE 89
          HGELDGAPVAVKLYRNENPSVAAQFESE
Sbjct: 61 HGELDGAPVAVKLYRNENPSVAAQFESE 88

[Close]

BLAST of CsGy3G039170.1 vs. NCBI nr
Match: XP_022148124.1 (probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Momordica charantia])

HSP 1 Score: 84.3 bits (207), Expect = 2.4e-13
Identity = 40/73 (54.79%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 16  RKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGAPVAVKLYR 75
           R+ +A  SR + VEVK RRFS+ ++VKMT++F+R IG+GGFG ++HG LD APVAVK+Y 
Sbjct: 132 RRKLAQNSRLVPVEVKRRRFSHPQIVKMTHDFRRVIGRGGFGTVFHGHLDDAPVAVKMYC 191

Query: 76  NENPSVAAQFESE 89
           N N +V   F++E
Sbjct: 192 NRNRNVHPGFQTE 204

[Close]

BLAST of CsGy3G039170.1 vs. NCBI nr
Match: XP_022955772.1 (probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Cucurbita moschata])

HSP 1 Score: 82.8 bits (203), Expect = 6.9e-13
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 1  MKDSLVLPAVFSS------------------AIRKLIAPKSRSLLVEVKLRRFSYVELVK 60
          MKD +V+P + S+                  A RKLIA K  S+ VE+K RRFSY E+VK
Sbjct: 1  MKDDVVVPVLASAVGLLGALLIALALFWVIKACRKLIAQKYESVPVEMKPRRFSYEEVVK 60

Query: 61 MTNNFQRRIGKGGFGNIYHGELDGAPVAVKLYR 76
          MT+NF R IG+GGFG++Y G+++G PVAVK++R
Sbjct: 61 MTHNFHRVIGRGGFGSVYQGQINGVPVAVKVHR 93

[Close]

BLAST of CsGy3G039170.1 vs. NCBI nr
Match: XP_022714522.1 (LRR receptor-like serine/threonine-protein kinase IOS1 [Durio zibethinus])

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 5   LVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGEL 64
           L+ PA+  SA+R++I    R    E+K R+F+Y E+ ++TN+F R IGKGGFG +YHG L
Sbjct: 632 LIEPALMLSAVREMIVDSRRPYQNELKNRQFTYSEVQRITNSFARVIGKGGFGTVYHGCL 691

Query: 65  DGAPVAVKLYRNENPSVAAQFESE 89
               VAVK+    +     QFE+E
Sbjct: 692 GDTEVAVKMLSKSSSQGYKQFEAE 715

[Close]

BLAST of CsGy3G039170.1 vs. NCBI nr
Match: XP_006306715.1 (probable LRR receptor-like serine/threonine-protein kinase At1g51860 isoform X1 [Capsella rubella] >EOA39613.1 hypothetical protein CARUB_v10008240mg [Capsella rubella])

HSP 1 Score: 70.5 bits (171), Expect = 3.5e-09
Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 8   PAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGA 67
           P+V +  +R      + S++   K R+ +Y E++KMTNNF+R +GKGGFG +YHG LDGA
Sbjct: 582 PSVAADIVRSETRSSNPSIM--TKERKITYPEVLKMTNNFERVLGKGGFGTVYHGNLDGA 641

Query: 68  PVAVKLYRNENPSVAAQFESE 89
            VAVK+  + +     +F++E
Sbjct: 642 QVAVKMLSHSSAQGYKEFKAE 660

[Close]

BLAST of CsGy3G039170.1 vs. TAIR10
Match: AT1G51860.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 68.9 bits (167), Expect = 1.9e-12
Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 5   LVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGEL 64
           LV P +  S  R      S +  +  + R+ +Y E++KMTNNF+R +GKGGFG +YHG L
Sbjct: 550 LVTPGIVKSETR------SSNPSIITRERKITYPEVLKMTNNFERVLGKGGFGTVYHGNL 609

Query: 65  DGAPVAVKLYRNENPSVAAQFESE 89
           DGA VAVK+  + +     +F++E
Sbjct: 610 DGAEVAVKMLSHSSAQGYKEFKAE 627

[Close]

BLAST of CsGy3G039170.1 vs. TAIR10
Match: AT3G46350.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 67.8 bits (164), Expect = 4.2e-12
Identity = 32/83 (38.55%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 7   LPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDG 66
           +P   ++ +  +++       +E+K ++FSY E++KMTNNFQR +G+GGFG +YHG+LD 
Sbjct: 526 IPPSPTTPLENVMSTSISETSIEMKRKKFSYSEVMKMTNNFQRALGEGGFGTVYHGDLDS 585

Query: 67  A-PVAVKLYRNENPSVAAQFESE 89
           +  VAVKL    +     +F++E
Sbjct: 586 SQQVAVKLLSQSSTQGYKEFKAE 608

[Close]

BLAST of CsGy3G039170.1 vs. TAIR10
Match: AT1G51890.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 66.6 bits (161), Expect = 9.3e-12
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 8   PAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGA 67
           P  F++   K  A  S S ++  K R+F+Y E++KMT NF+R +GKGGFG +YHG LD  
Sbjct: 534 PRSFTTGTVKSDARSSSSSII-TKERKFTYSEVLKMTKNFERVLGKGGFGTVYHGNLDDT 593

Query: 68  PVAVKLYRNENPSVAAQFESE 89
            VAVK+  + +     +F++E
Sbjct: 594 QVAVKMLSHSSAQGYKEFKAE 613

[Close]

BLAST of CsGy3G039170.1 vs. TAIR10
Match: AT5G59660.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11
Identity = 30/64 (46.88%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 31  KLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGA-PVAVKLYRNENPSVAAQFESEG 90
           K +RF+Y+E++KMTNNFQR +GKGGFG +YHG + G+  VAVK+    +     QF++E 
Sbjct: 496 KSKRFTYLEVIKMTNNFQRVLGKGGFGMVYHGTVKGSDQVAVKVLSQSSTQGYKQFKAEA 555

Query: 91  VVVQ 94
           ++ +
Sbjct: 556 LIYE 559

[Close]

BLAST of CsGy3G039170.1 vs. TAIR10
Match: AT1G51820.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 64.7 bits (156), Expect = 3.5e-11
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 21  PKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGA-PVAVKLYRNENP 80
           P+S    +  K RRFSY ++V MTNNFQR +GKGGFG +YHG ++G   VAVK+  + + 
Sbjct: 554 PRSSEPAIVTKNRRFSYSQVVIMTNNFQRILGKGGFGMVYHGFVNGTEQVAVKILSHSSS 613

Query: 81  SVAAQFESE 89
               QF++E
Sbjct: 614 QGYKQFKAE 622

[Close]

BLAST of CsGy3G039170.1 vs. Swiss-Prot
Match: sp|C0LGG4|Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana OX=3702 GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 3.4e-11
Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 5   LVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGEL 64
           LV P +  S  R      S +  +  + R+ +Y E++KMTNNF+R +GKGGFG +YHG L
Sbjct: 550 LVTPGIVKSETR------SSNPSIITRERKITYPEVLKMTNNFERVLGKGGFGTVYHGNL 609

Query: 65  DGAPVAVKLYRNENPSVAAQFESE 89
           DGA VAVK+  + +     +F++E
Sbjct: 610 DGAEVAVKMLSHSSAQGYKEFKAE 627

[Close]

BLAST of CsGy3G039170.1 vs. Swiss-Prot
Match: sp|C0LGG6|Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana OX=3702 GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 1.7e-10
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 8   PAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGA 67
           P  F++   K  A  S S ++  K R+F+Y E++KMT NF+R +GKGGFG +YHG LD  
Sbjct: 534 PRSFTTGTVKSDARSSSSSII-TKERKFTYSEVLKMTKNFERVLGKGGFGTVYHGNLDDT 593

Query: 68  PVAVKLYRNENPSVAAQFESE 89
            VAVK+  + +     +F++E
Sbjct: 594 QVAVKMLSHSSAQGYKEFKAE 613

[Close]

BLAST of CsGy3G039170.1 vs. Swiss-Prot
Match: sp|C0LGG3|Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana OX=3702 GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.4e-10
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 21  PKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGA-PVAVKLYRNENP 80
           P+S    +  K RRFSY ++V MTNNFQR +GKGGFG +YHG ++G   VAVK+  + + 
Sbjct: 554 PRSSEPAIVTKNRRFSYSQVVIMTNNFQRILGKGGFGMVYHGFVNGTEQVAVKILSHSSS 613

Query: 81  SVAAQFESE 89
               QF++E
Sbjct: 614 QGYKQFKAE 622

[Close]

BLAST of CsGy3G039170.1 vs. Swiss-Prot
Match: sp|Q9FZB1|Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana OX=3702 GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.3e-10
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 31  KLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGAPVAVKLYRNENPSVAAQFESE 89
           K RR +Y E++KMTNNF+R +GKGGFG +YHG L+   VAVK+  + +     +F++E
Sbjct: 552 KERRITYPEVLKMTNNFERVLGKGGFGTVYHGNLEDTQVAVKMLSHSSAQGYKEFKAE 609

[Close]

BLAST of CsGy3G039170.1 vs. Swiss-Prot
Match: sp|O64483|SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana OX=3702 GN=SIRK PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-09
Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 33  RRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGAPVAVKLYRNENPSVAAQFESE 89
           R F Y E+V +TNNF+R IGKGGFG +YHG ++G  VAVK+   E+     +F +E
Sbjct: 562 RYFKYSEVVNITNNFERVIGKGGFGKVYHGVINGEQVAVKVLSEESAQGYKEFRAE 617

[Close]

BLAST of CsGy3G039170.1 vs. TrEMBL
Match: tr|A0A0A0LCW9|A0A0A0LCW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G850600 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.7e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MKDSLVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIY 60
          MKDSLVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIY
Sbjct: 1  MKDSLVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIY 60

Query: 61 HGELDGAPVAVKLYRNENPSVAAQFESE 89
          HGELDGAPVAVKLYRNENPSVAAQFESE
Sbjct: 61 HGELDGAPVAVKLYRNENPSVAAQFESE 88

[Close]

BLAST of CsGy3G039170.1 vs. TrEMBL
Match: tr|R0IQU7|R0IQU7_9BRAS (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10008240mg PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.3e-09
Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 8   PAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGA 67
           P+V +  +R      + S++   K R+ +Y E++KMTNNF+R +GKGGFG +YHG LDGA
Sbjct: 582 PSVAADIVRSETRSSNPSIM--TKERKITYPEVLKMTNNFERVLGKGGFGTVYHGNLDGA 641

Query: 68  PVAVKLYRNENPSVAAQFESE 89
            VAVK+  + +     +F++E
Sbjct: 642 QVAVKMLSHSSAQGYKEFKAE 660

[Close]

BLAST of CsGy3G039170.1 vs. TrEMBL
Match: tr|A0A078I724|A0A078I724_BRANA (BnaA05g15180D protein (Fragment) OS=Brassica napus OX=3708 GN=BnaA05g15180D PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-09
Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 8   PAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGELDGA 67
           P+V +S  +    P + S++   K RR +Y E+++MTNNFQR +GKGGFG +YHG+LD A
Sbjct: 550 PSVTTSLGKSETRPSNPSII--TKDRRITYPEVLRMTNNFQRVLGKGGFGTVYHGDLDDA 609

Query: 68  PVAVKLYRNENPSVAAQFESE 89
            VAVK+  + +     +F++E
Sbjct: 610 QVAVKMLSHSSAQGYKEFKAE 628

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BLAST of CsGy3G039170.1 vs. TrEMBL
Match: tr|A0A2H5PWK6|A0A2H5PWK6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_171960 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-09
Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 5    LVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGEL 64
            L L A+  +  R+  A K +  L E++ R+FSY +++K+TNNF+R +G+GGFG +YHG L
Sbjct: 1923 LALLAILQNLRRRKQAGKKKGSL-ELENRKFSYFDVLKITNNFERVLGRGGFGTVYHGYL 1982

Query: 65   DGAPVAVKLYRNENPSVAAQFESEGVVVQV 95
            +   VAVK+  + +     QF++E +VV V
Sbjct: 1983 NDEQVAVKMLSSSSVQGYKQFQAEYLVVTV 2011

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BLAST of CsGy3G039170.1 vs. TrEMBL
Match: tr|A0A2H5PVQ2|A0A2H5PVQ2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_171960 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-09
Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 5    LVLPAVFSSAIRKLIAPKSRSLLVEVKLRRFSYVELVKMTNNFQRRIGKGGFGNIYHGEL 64
            L L A+  +  R+  A K +  L E++ R+FSY +++K+TNNF+R +G+GGFG +YHG L
Sbjct: 1871 LALLAILQNLRRRKQAGKKKGSL-ELENRKFSYFDVLKITNNFERVLGRGGFGTVYHGYL 1930

Query: 65   DGAPVAVKLYRNENPSVAAQFESEGVVVQV 95
            +   VAVK+  + +     QF++E +VV V
Sbjct: 1931 NDEQVAVKMLSSSSVQGYKQFQAEYLVVTV 1959

The following BLAST results are available for this feature:

BLAST of CsGy3G039170.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146864.1	8.6e-40	100.00	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51880 ...	[more]
XP_022148124.1	2.4e-13	54.79	probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Momordica ...	[more]
XP_022955772.1	6.9e-13	48.39	probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Cucurbita ...	[more]
XP_022714522.1	1.2e-09	44.05	LRR receptor-like serine/threonine-protein kinase IOS1 [Durio zibethinus]	[more]
XP_006306715.1	3.5e-09	41.98	probable LRR receptor-like serine/threonine-protein kinase At1g51860 isoform X1 ...	[more]

BLAST of CsGy3G039170.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G51860.1	1.9e-12	41.67	Leucine-rich repeat protein kinase family protein	[more]
AT3G46350.1	4.2e-12	38.55	Leucine-rich repeat protein kinase family protein	[more]
AT1G51890.1	9.3e-12	41.98	Leucine-rich repeat protein kinase family protein	[more]
AT5G59660.1	1.2e-11	46.88	Leucine-rich repeat protein kinase family protein	[more]
AT1G51820.1	3.5e-11	47.83	Leucine-rich repeat protein kinase family protein	[more]

BLAST of CsGy3G039170.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|C0LGG4\|Y1518_ARATH	3.4e-11	41.67	Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidop...	[more]
sp\|C0LGG6\|Y5189_ARATH	1.7e-10	41.98	Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana OX=3...	[more]
sp\|C0LGG3\|Y5182_ARATH	6.4e-10	47.83	Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidop...	[more]
sp\|Q9FZB1\|Y5188_ARATH	8.3e-10	48.28	Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidop...	[more]
sp\|O64483\|SIRK_ARATH	2.4e-09	50.00	Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis ...	[more]

BLAST of CsGy3G039170.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LCW9\|A0A0A0LCW9_CUCSA	5.7e-40	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G850600 PE=4 SV=1	[more]
tr\|R0IQU7\|R0IQU7_9BRAS	2.3e-09	41.98	Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10008240mg PE=4 S...	[more]
tr\|A0A078I724\|A0A078I724_BRANA	3.1e-09	43.21	BnaA05g15180D protein (Fragment) OS=Brassica napus OX=3708 GN=BnaA05g15180D PE=4...	[more]
tr\|A0A2H5PWK6\|A0A2H5PWK6_CITUN	5.2e-09	41.11	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_171960 PE=4 SV=1	[more]
tr\|A0A2H5PVQ2\|A0A2H5PVQ2_CITUN	5.2e-09	41.11	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_171960 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf
IPR017441	Protein_kinase_ATP_BS

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004672	protein kinase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G039170	CsGy3G039170	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G039170.1	CsGy3G039170.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G039170.1.five_prime_UTR.1	CsGy3G039170.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G039170.1.exon.1	CsGy3G039170.1.exon.1	exon
CsGy3G039170.1.exon.2	CsGy3G039170.1.exon.2	exon
CsGy3G039170.1.exon.3	CsGy3G039170.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G039170.1.CDS.1	CsGy3G039170.1.CDS.1	CDS
CsGy3G039170.1.CDS.2	CsGy3G039170.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G039170.1.three_prime_UTR.1	CsGy3G039170.1.three_prime_UTR.1	three_prime_UTR
CsGy3G039170.1.three_prime_UTR.2	CsGy3G039170.1.three_prime_UTR.2	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.200.20		coord: 19..94 e-value: 6.5E-13 score: 50.6
None	No IPR available	PANTHER	PTHR27003:SF44	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE MEE39-RELATED	coord: 26..88
None	No IPR available	PANTHER	PTHR27003	FAMILY NOT NAMED	coord: 26..88
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 51..72
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	coord: 25..91