CsGy3G032980.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy3G032980.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 32068409 .. 32068723 (+)
Sequence length315
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTGGTTGCCGGAGACGTTGAAGCGGGTGAGTTGGGCTCCGGTGACGTCGAACTTGAGCTTATTGGGACGGAATACGAGCCAAAATACCAAGACAGCTACACCAAGGACGACGACTATGGCGATGAGGAACTTGAGAAAGGTGGTGAGAAGGCAGCAGGCGCAGCCTCGGCCGTGGCCGTGGCGATGGTAGGTCTTTGCCGGAGGAGGGACGGCAGGGCCGTAAAAGGCGCCGTTGAGATGGGGTTGTTTGTCAGCCATATAATGTGTATATATGTTTTGGTGAAAAAGAGAGAGAATGATATCAAATGA

mRNA sequence

ATGGAGTTGGTTGCCGGAGACGTTGAAGCGGGTGAGTTGGGCTCCGGTGACGTCGAACTTGAGCTTATTGGGACGGAATACGAGCCAAAATACCAAGACAGCTACACCAAGGACGACGACTATGGCGATGAGGAACTTGAGAAAGGTGGTGAGAAGGCAGCAGGCGCAGCCTCGGCCGTGGCCGTGGCGATGGTAGGTCTTTGCCGGAGGAGGGACGGCAGGGCCGTAAAAGGCGCCGTTGAGATGGGGTTGTTTGTCAGCCATATAATGTGTATATATGTTTTGGTGAAAAAGAGAGAGAATGATATCAAATGA

Coding sequence (CDS)

ATGGAGTTGGTTGCCGGAGACGTTGAAGCGGGTGAGTTGGGCTCCGGTGACGTCGAACTTGAGCTTATTGGGACGGAATACGAGCCAAAATACCAAGACAGCTACACCAAGGACGACGACTATGGCGATGAGGAACTTGAGAAAGGTGGTGAGAAGGCAGCAGGCGCAGCCTCGGCCGTGGCCGTGGCGATGGTAGGTCTTTGCCGGAGGAGGGACGGCAGGGCCGTAAAAGGCGCCGTTGAGATGGGGTTGTTTGTCAGCCATATAATGTGTATATATGTTTTGGTGAAAAAGAGAGAGAATGATATCAAATGA

Protein sequence

MELVAGDVEAGELGSGDVELELIGTEYEPKYQDSYTKDDDYGDEELEKGGEKAAGAASAVAVAMVGLCRRRDGRAVKGAVEMGLFVSHIMCIYVLVKKRENDIK
Homology
[Close]
BLAST of CsGy3G032980.1 vs. NCBI nr
Match: KGN59197.1 (hypothetical protein Csa_3G779015 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 5.0e-49
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MELVAGDVEAGELGSGDVELELIGTEYEPKYQDSYTKDDDYGDEELEKGGEKAAGAASAV 60
           MELVAGDVEAGELGSGDVELELIGTEYEPKYQDSYTKDDDYGDEELEKGGEKAAGAASAV
Sbjct: 1   MELVAGDVEAGELGSGDVELELIGTEYEPKYQDSYTKDDDYGDEELEKGGEKAAGAASAV 60

Query: 61  AVAMVGLCRRRDGRAVKGAVEMGLFVSHIMCIYVLVKKRENDIK 105
           AVAMVGLCRRRDGRAVKGAVEMGLFVSHIMCIYVLVKKRENDIK
Sbjct: 61  AVAMVGLCRRRDGRAVKGAVEMGLFVSHIMCIYVLVKKRENDIK 104

[Close]
BLAST of CsGy3G032980.1 vs. TrEMBL
Match: tr|A0A0A0LER2|A0A0A0LER2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G779015 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.3e-49
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MELVAGDVEAGELGSGDVELELIGTEYEPKYQDSYTKDDDYGDEELEKGGEKAAGAASAV 60
           MELVAGDVEAGELGSGDVELELIGTEYEPKYQDSYTKDDDYGDEELEKGGEKAAGAASAV
Sbjct: 1   MELVAGDVEAGELGSGDVELELIGTEYEPKYQDSYTKDDDYGDEELEKGGEKAAGAASAV 60

Query: 61  AVAMVGLCRRRDGRAVKGAVEMGLFVSHIMCIYVLVKKRENDIK 105
           AVAMVGLCRRRDGRAVKGAVEMGLFVSHIMCIYVLVKKRENDIK
Sbjct: 61  AVAMVGLCRRRDGRAVKGAVEMGLFVSHIMCIYVLVKKRENDIK 104

The following BLAST results are available for this feature:
BLAST of CsGy3G032980.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59197.15.0e-49100.00hypothetical protein Csa_3G779015 [Cucumis sativus][more]
BLAST of CsGy3G032980.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G032980.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G032980.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LER2|A0A0A0LER2_CUCSA3.3e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G779015 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy3G032980CsGy3G032980gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G032980.1.exon.1CsGy3G032980.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G032980.1.CDS.1CsGy3G032980.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy3G032980.1CsGy3G032980.1-proteinpolypeptide