CsGy3G025990.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAAAAAGGGAAAAAAAGGAAGTGTTGTAGGTGAGATAGATTTGTCAGAAGTGGAGAAGATTTCAAAACAAAAATCATGTAGAAACAAACCCCACATATATTATGCCTCTTTATATATGTTGATGAACTTCATTTCGTCCTCCACTGCAAAAGAAAAGGATCGAAGGTAATAAGAAGAAAAATTGAGTTGGCAGTAATTATTAGATTAAGAAGATAGGGATGAAGAGCAAAGTGCTAATAATTGGAGGAACAGGTTACTTGGGAAAGAGATTGGTTAAGGCAAGTTTAAAATTAGGGCATGAAACATATGTTTTACAAAGGCAAGAAATTGGAGTTGATCATATTGAGAAAGTTGAGCTTCTTTTATCATTCAAGAAAAAAGGAGCTCATTTGATTTGTGGTTCTTTTAATGACCATAATACTCTTGTTAAAGCTATTAAGCTTGTAGATGTTGTTATTTCTTCTATTTCTGGTGTTCATATTAGATCTCATCATATTCTTCTTCAACTCAACCTTGTTCGTGCAATTAAAGAAGCTGGAAATGTTAAGGTACCCTAATATATGTATGCTCTTATTTCTCATTCATTCAAAGTCATATAAGTGATCCCTTAGAGGAATTATTAACGGTATATATAATAACATCTTTTCTGCTTTTAGGTTTATGCAACATTTTCTTTTAACTATTTGATTTTTAGTTGTTTGCTTTTTTATTATTTTAAACCTATCATATCTCGTTTTTATTCTTAAGCTTTAGTTCGATACATTTTGGGAGTGTTTTTAAAGTCAAGTCAAATTTTGAAATCGGAAAAAGAAAGTAGTTCTTAGACTTTATATGTGGTTATAATAGAATACGAAAGAAATAGACTTCATGTTAGTAAAGTTATATATTTTAAAGTTCAACTTTTGAAAGCTTAAATTTAACGTTAAATAGTGATGAAATTAATGAAACTTAATTAATTATATTTTTTTTTTACTTCTTTTAAATTAAGCATAATTAATTATAATTATTTTTACTTTATCTAAATTAATTAATAAACATTAATACTAAAATTAAATAGGAGTATTTAGTGAAAAAAATTAAGTTCAAATGTATAAATATTGAAATTTAAAGATCAGTTTTTTTTTTTAAATTCTCACATAAAAAGATAAACTTGTAACATTGTAATAGACTAAAATTCAAATCACACTCAAAACTTAATAATTAAGGTCTTATTAACCATTTTCTTTGCATTCAATTCTTTGTCAAATTTTCCAAAACAAAAGAAAATTTTTAAAAGTTACTTTATATATGAACTATAAAATTTGTTGTAAGTTGTAAATATTTTATAAAATTTGCTATTTTTGAAAATTTTCTTAAATTTATTTCAATCAAACTACACTTATACTTGGCTTTTAAGTTTTTTTAGTGATGATTTGTATCAAATAAAGATGAAAGTAAGAAGGGAAAAAAATCATAATAAACAAATTTTTCAGCTAAAATTATCATATAAAGATTAAATATTTAGTTTAATCTCAATTATTATTAATTTATTAATTTAAATATAATTCCTTTAATTATTAATTTACAATATTACTTTACACTATATTATATATGCGTATGTGTTTTAATCTTTTTTTTTAAGCATACATGTTCTAATTTTAGTTAAACTAAAGTGAATTTCTTACATGAGTTTAATATTATTTAACGTATGTATATGATTCTAATTTTTAACTAATTTTCTTTTATTATTTTTCAAACCCTAATGCACGAAAATAGTTTTCTTTTACTGACAGACATTTTTAAAACCCTAATGAAGAAATTCTTTGGCTAGTATTTTCGAACCCTAATTAATAAACTGTCTTCACGTCATAGGCGGATCTATTAAGGAGCTAGAAGGACACGTGTTCCCTCACATTCCCAATTTTTGTATTTTAATATTAGTTTTAAAGTGTCAAATTATAATATATCTTAAAAAATGTGTTTTTGGTAAGTAGTTGTGCCCCTTGAAATCCTAACGTCTTGGGTTCAAAACTCATCCACCATAGGCCACTACTTCACATGTTAGATGTTGGTAATAAAAATGTGTATATGGACCAAAGGATACTAACCTATTCATCAAAGATTTTAGATTAAGTGAAATTTGAAGAATGAGTAAAATAAGATTTATTTACAGAGATTTTTGCCGTCTGAGTTTGGGACGGATCCGGCAAGAATGGAGGATGCAATGGAGCCAGGAAGAGTAACATTTGATGATAAAATGGTGGTGAGGAAAGCCATTGAAGAGGCTAAAATTCCCTTTACTTATATCTCAGCCAATTGTTTTGCTGGTTACTTTCTCGGTGGTTTGTGTCAACCTGGTTCAATCCTTCCTTCCAAAGATCATGTTCTTCTCCTTGGAGATGGCAATCAAAAAGGTTATACATACATATACAATCAAAAATGTTACTTCTAACTTTAAACTTGATAGGTATGAACCTTATTGAATTGTGGTGAATAATATAATTGGTGACAGCAATATATGTGGATGAAGATGACATTGCAATGTACACAATGAAGAGCATAGATGACTGTCGAACTCTTAACAAAACAGTGTACATTAGGCCACCCAAAAACATTTTATCACAAAGAGAAGTTGTTGAGATTTGGGAGAAATTAATTGGAAAACAGCTAATCAAAACCTCCATCTCTTCCCAAGAATTTCTAGCTAATATGAAAGGTTAGCTCCATTCATTACATATATATATTACTTATTCTTGATTTTTTTTCCCTATACATACATATACATACATATATATGTTTTGCTATAGCATTTTACTCCCTAATGGTTTAAGTGTTTGTCAATTAAAATATGCCTGTAATCTTAAAATTTTCAATTTAGTTCCATAGGTTTAATATTTGTCAATAAGGATATCAATCAAACTAAAAGATATTATAAACTAAGCACTATCTCCCATTGACGCAAACCTACATACTATCTTTCTTTCTTGAGGTTAAAAACATTCAATTTCCATCTTTGCAATTGTACTTAAAAAATAACATATTCTCACTATGCATGATAATATTATTGGATGCATTATTTGTTATGATCGAGACAATTTTAACATTGATAAAAAGGAAGTGTATTGAAACTTTTTAAATTAAAACTCGTATAATACTTTGTTTAGAAAGAAAAAAAAAGTGTTTTTATTCACTGGGTTTTTTTATCAAGCATAATTAATTATAATTCTTTTTAAAATTTTGTTAAAACAAAAGGTGAGTGTTTCAAAAATCTTCATTAAAAATGTAAACCTTCCAAGTGAGATAAAACTCAAATTTAAGAATAAACTTGAAATATTTAAAACTTTTAAACTAAATAAAAATGGGTAAATGGTAATGAATAGCAAATTCTAGATATAATAATAAAGTGTATAGTAACATTTTAAAAAATTGCAAATATAGAAAAGTCTATAAATGATATATTTATATCGTTGATAGACTTATATAGTCTATCAGTCATAGACCATAATTGATAGACAACGAAGTCTATCTCCAATCAATTTGGTTTTATTTGTAAATTTTTTTCAATTGTGTTATAAATGTTAAATATTTTTATTCTAATTACTATATTTCAAGAGTTCTCAATAAAAATCAAACTCAAAACGTAAAAGGATAAAAAGTGACTTTTGAAACCTAACAAACTTAGCTTAAACCCCATACAAAAAAGTATAATTTTTCTTTTTTAAAAAAATAATATATTAATATAATTTATATAGACACATTAGAGACTAATATATATATATATATATATATTTAGTATTGTAGTATTGAAGTTAGAGGTTTGATTCCTTCCAATTATATTTCATGTAAAATTTTGAATTTTGATGATTGTATATTAATTTTTTTTTTTTTTGTTGAGAAAAGATCAAGACTATGCAGCGCAAGTTGGGTTAAGTCATTATTATCATGTATGCTATGAGGGTTGTCTTGCAAACTTCGAAATAGGAAAAGATGGTGAAGAAGCTTGCAATCTCTATCCAGAAGTTGACTACACAACTGTGGAGGAATACATGAAACGTTACCTTTAATTTAAAGTCCCATTCTAAAATAAAGTCATTTACGCTTCTCAATTCACCAATGTCCTAAAGTCATATGTTCCTTTGGCCCTAATCTCTGGTGTATGACTATGTTTGAACTTTCAACCAATTGCATTGACAGAATAATAGTGTTGAAGTCTATCTCTTCCTCTTTAACTCAAGCTCTCATTTATTTATTTGTTTAACTATGATACATCTTTTTAATTATTTATTATGTCTTTTTCTACAGAAAGATTATAATCTTTAACCTCTTAATAAAAAATATAAAAATTTAAATCGATTAAAACATTGACCTAACTCAACTAATACATATCTTTTTCTTTCTCTTTATCTCACAAAAATAGGATTTACATATAAAAAATTATAAAATTATACTTTTGGCTTTGGTATTTGATTGGTTAACTTTTTTATATAAATAAAGTATCAAACTAAATTTACGAACGTAAAGAAATGCACGTGAAAATGAAATGACAGGATTAACCAAAACCAAAAGCAATAACCAAAAACACTATTTAAATCTAAAACTTATATGAATGAATCCAATAAATACAGCATCTCTTTTTTTCTTTTTTCTTTTTCCT AAAAGAAAAAGGGAAAAAAAGGAAGTGTTGTAGGTGAGATAGATTTGTCAGAAGTGGAGAAGATTTCAAAACAAAAATCATGTAGAAACAAACCCCACATATATTATGCCTCTTTATATATGTTGATGAACTTCATTTCGTCCTCCACTGCAAAAGAAAAGGATCGAAGGTAATAAGAAGAAAAATTGAGTTGGCAGTAATTATTAGATTAAGAAGATAGGGATGAAGAGCAAAGTGCTAATAATTGGAGGAACAGGTTACTTGGGAAAGAGATTGGTTAAGGCAAGTTTAAAATTAGGGCATGAAACATATGTTTTACAAAGGCAAGAAATTGGAGTTGATCATATTGAGAAAGTTGAGCTTCTTTTATCATTCAAGAAAAAAGGAGCTCATTTGATTTGTGGTTCTTTTAATGACCATAATACTCTTGTTAAAGCTATTAAGCTTGTAGATGTTGTTATTTCTTCTATTTCTGGTGTTCATATTAGATCTCATCATATTCTTCTTCAACTCAACCTTGTTCGTGCAATTAAAGAAGCTGGAAATGTTAAGAGATTTTTGCCGTCTGAGTTTGGGACGGATCCGGCAAGAATGGAGGATGCAATGGAGCCAGGAAGAGTAACATTTGATGATAAAATGGTGGTGAGGAAAGCCATTGAAGAGGCTAAAATTCCCTTTACTTATATCTCAGCCAATTGTTTTGCTGGTTACTTTCTCGGTGGTTTGTGTCAACCTGGTTCAATCCTTCCTTCCAAAGATCATGTTCTTCTCCTTGGAGATGGCAATCAAAAAGCAATATATGTGGATGAAGATGACATTGCAATGTACACAATGAAGAGCATAGATGACTGTCGAACTCTTAACAAAACAGTGTACATTAGGCCACCCAAAAACATTTTATCACAAAGAGAAGTTGTTGAGATTTGGGAGAAATTAATTGGAAAACAGCTAATCAAAACCTCCATCTCTTCCCAAGAATTTCTAGCTAATATGAAAGATCAAGACTATGCAGCGCAAGTTGGGTTAAGTCATTATTATCATGTATGCTATGAGGGTTGTCTTGCAAACTTCGAAATAGGAAAAGATGGTGAAGAAGCTTGCAATCTCTATCCAGAAGTTGACTACACAACTGTGGAGGAATACATGAAACGTTACCTTTAATTTAAAGTCCCATTCTAAAATAAAGTCATTTACGCTTCTCAATTCACCAATGTCCTAAAGTCATATGTTCCTTTGGCCCTAATCTCTGGTGTATGACTATGTTTGAACTTTCAACCAATTGCATTGACAGAATAATAGTGTTGAAGTCTATCTCTTCCTCTTTAACTCAAGCTCTCATTTATTTATTTGTTTAACTATGATACATCTTTTTAATTATTTATTATGTCTTTTTCTACAGAAAGATTATAATCTTTAACCTCTTAATAAAAAATATAAAAATTTAAATCGATTAAAACATTGACCTAACTCAACTAATACATATCTTTTTCTTTCTCTTTATCTCACAAAAATAGGATTTACATATAAAAAATTATAAAATTATACTTTTGGCTTTGGTATTTGATTGGTTAACTTTTTTATATAAATAAAGTATCAAACTAAATTTACGAACGTAAAGAAATGCACGTGAAAATGAAATGACAGGATTAACCAAAACCAAAAGCAATAACCAAAAACACTATTTAAATCTAAAACTTATATGAATGAATCCAATAAATACAGCATCTCTTTTTTTCTTTTTTCTTTTTCCT ATGAAGAGCAAAGTGCTAATAATTGGAGGAACAGGTTACTTGGGAAAGAGATTGGTTAAGGCAAGTTTAAAATTAGGGCATGAAACATATGTTTTACAAAGGCAAGAAATTGGAGTTGATCATATTGAGAAAGTTGAGCTTCTTTTATCATTCAAGAAAAAAGGAGCTCATTTGATTTGTGGTTCTTTTAATGACCATAATACTCTTGTTAAAGCTATTAAGCTTGTAGATGTTGTTATTTCTTCTATTTCTGGTGTTCATATTAGATCTCATCATATTCTTCTTCAACTCAACCTTGTTCGTGCAATTAAAGAAGCTGGAAATGTTAAGAGATTTTTGCCGTCTGAGTTTGGGACGGATCCGGCAAGAATGGAGGATGCAATGGAGCCAGGAAGAGTAACATTTGATGATAAAATGGTGGTGAGGAAAGCCATTGAAGAGGCTAAAATTCCCTTTACTTATATCTCAGCCAATTGTTTTGCTGGTTACTTTCTCGGTGGTTTGTGTCAACCTGGTTCAATCCTTCCTTCCAAAGATCATGTTCTTCTCCTTGGAGATGGCAATCAAAAAGCAATATATGTGGATGAAGATGACATTGCAATGTACACAATGAAGAGCATAGATGACTGTCGAACTCTTAACAAAACAGTGTACATTAGGCCACCCAAAAACATTTTATCACAAAGAGAAGTTGTTGAGATTTGGGAGAAATTAATTGGAAAACAGCTAATCAAAACCTCCATCTCTTCCCAAGAATTTCTAGCTAATATGAAAGATCAAGACTATGCAGCGCAAGTTGGGTTAAGTCATTATTATCATGTATGCTATGAGGGTTGTCTTGCAAACTTCGAAATAGGAAAAGATGGTGAAGAAGCTTGCAATCTCTATCCAGAAGTTGACTACACAACTGTGGAGGAATACATGAAACGTTACCTTTAA MKSKVLIIGGTGYLGKRLVKASLKLGHETYVLQRQEIGVDHIEKVELLLSFKKKGAHLICGSFNDHNTLVKAIKLVDVVISSISGVHIRSHHILLQLNLVRAIKEAGNVKRFLPSEFGTDPARMEDAMEPGRVTFDDKMVVRKAIEEAKIPFTYISANCFAGYFLGGLCQPGSILPSKDHVLLLGDGNQKAIYVDEDDIAMYTMKSIDDCRTLNKTVYIRPPKNILSQREVVEIWEKLIGKQLIKTSISSQEFLANMKDQDYAAQVGLSHYYHVCYEGCLANFEIGKDGEEACNLYPEVDYTTVEEYMKRYL
BLAST of CsGy3G025990.1 vs. NCBI nr
Match: XP_011651690.1 (PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2-like [Cucumis sativus] >KGN58400.1 hypothetical protein Csa_3G636980 [Cucumis sativus]) HSP 1 Score: 628.6 bits (1620), Expect = 1.1e-176 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. NCBI nr
Match: XP_008460436.1 (PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2-like [Cucumis melo]) HSP 1 Score: 593.6 bits (1529), Expect = 3.9e-166 Identity = 297/312 (95.19%), Postives = 303/312 (97.12%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. NCBI nr
Match: XP_022156026.1 (bifunctional pinoresinol-lariciresinol reductase 2-like [Momordica charantia]) HSP 1 Score: 547.7 bits (1410), Expect = 2.5e-152 Identity = 272/312 (87.18%), Postives = 292/312 (93.59%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. NCBI nr
Match: XP_022963982.1 (bifunctional pinoresinol-lariciresinol reductase 2-like [Cucurbita moschata]) HSP 1 Score: 546.6 bits (1407), Expect = 5.5e-152 Identity = 270/311 (86.82%), Postives = 293/311 (94.21%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. NCBI nr
Match: XP_023554706.1 (bifunctional pinoresinol-lariciresinol reductase 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 545.0 bits (1403), Expect = 1.6e-151 Identity = 269/311 (86.50%), Postives = 293/311 (94.21%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TAIR10
Match: AT1G32100.1 (pinoresinol reductase 1) HSP 1 Score: 388.7 bits (997), Expect = 3.5e-108 Identity = 187/311 (60.13%), Postives = 246/311 (79.10%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TAIR10
Match: AT4G13660.1 (pinoresinol reductase 2) HSP 1 Score: 375.9 bits (964), Expect = 2.3e-104 Identity = 185/311 (59.49%), Postives = 240/311 (77.17%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TAIR10
Match: AT1G75280.1 (NmrA-like negative transcriptional regulator family protein) HSP 1 Score: 261.9 bits (668), Expect = 4.9e-70 Identity = 149/313 (47.60%), Postives = 196/313 (62.62%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TAIR10
Match: AT1G75290.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 257.3 bits (656), Expect = 1.2e-68 Identity = 143/313 (45.69%), Postives = 196/313 (62.62%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TAIR10
Match: AT1G75300.1 (NmrA-like negative transcriptional regulator family protein) HSP 1 Score: 246.5 bits (628), Expect = 2.1e-65 Identity = 146/327 (44.65%), Postives = 198/327 (60.55%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. Swiss-Prot
Match: sp|E6Y2X0|PILR2_LINUS (Bifunctional pinoresinol-lariciresinol reductase 2 OS=Linum usitatissimum OX=4006 GN=PLR_Lu2 PE=1 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 1.3e-141 Identity = 251/311 (80.71%), Postives = 275/311 (88.42%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. Swiss-Prot
Match: sp|B5KRH5|PILR1_LINCY (Bifunctional pinoresinol-lariciresinol reductase OS=Linum corymbulosum OX=480358 GN=PLR_Lc1 PE=1 SV=1) HSP 1 Score: 499.2 bits (1284), Expect = 3.3e-140 Identity = 246/310 (79.35%), Postives = 277/310 (89.35%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. Swiss-Prot
Match: sp|Q4R0I0|PILR1_LINAL (Bifunctional pinoresinol-lariciresinol reductase OS=Linum album OX=191219 GN=PLR1 PE=1 SV=1) HSP 1 Score: 487.6 bits (1254), Expect = 1.0e-136 Identity = 236/310 (76.13%), Postives = 275/310 (88.71%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. Swiss-Prot
Match: sp|P93143|PILR1_FORIN (Bifunctional pinoresinol-lariciresinol reductase OS=Forsythia intermedia OX=55183 GN=PLR_Fi1 PE=1 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 6.5e-128 Identity = 230/312 (73.72%), Postives = 272/312 (87.18%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. Swiss-Prot
Match: sp|P52581|IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus OX=3870 PE=2 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 5.3e-122 Identity = 208/311 (66.88%), Postives = 265/311 (85.21%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TrEMBL
Match: tr|A0A0A0L8W5|A0A0A0L8W5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G636980 PE=4 SV=1) HSP 1 Score: 628.6 bits (1620), Expect = 7.3e-177 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TrEMBL
Match: tr|A0A1S3CCK4|A0A1S3CCK4_CUCME (bifunctional pinoresinol-lariciresinol reductase 2-like OS=Cucumis melo OX=3656 GN=LOC103499245 PE=4 SV=1) HSP 1 Score: 593.6 bits (1529), Expect = 2.6e-166 Identity = 297/312 (95.19%), Postives = 303/312 (97.12%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TrEMBL
Match: tr|A0A0D2R6R4|A0A0D2R6R4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G179800 PE=4 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 1.1e-145 Identity = 261/312 (83.65%), Postives = 285/312 (91.35%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TrEMBL
Match: tr|A0A1R3JF45|A0A1R3JF45_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16878 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 9.7e-145 Identity = 260/312 (83.33%), Postives = 285/312 (91.35%), Query Frame = 0
BLAST of CsGy3G025990.1 vs. TrEMBL
Match: tr|A0A1R3IZ71|A0A1R3IZ71_COCAP (NmrA-like protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_08735 PE=4 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 1.3e-144 Identity = 259/312 (83.01%), Postives = 286/312 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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