CsGy3G021650.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCCTCTTACTTTTCGTTTTCCGATTCAGATTTCTCGACGGATTCTTCATTCGGATCAACTGAATCATCGTTCTCATGGACTGATTTTTTATCAATCCACAGTGCGCTAGAAAACTCAATCGGAATCGAAGAGTTTCTCGGGAAACAAAAATTGGATTCGGAATCGAAAATCGTAGTGAAAGAAGAAATCGAAGTTAACTCGATCGATTTTAAGGAGGAGAAACAGAGGAAGACGACGGAGAAGAGTTACAGAGGTGTGAGACGGCGGCCATGGGGTAAATACGCGGCGGAGATTAGGGATTCAACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGACAGCGCTGAAGCTGCTGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAACAATGGCGGTGTTGAATTTTCCGGTGGAAATGGTGAGGGAATCATTACAGGATATTGAGTATGAATTGGAAGAGGGATGTTCGCCGGTGGTAGCCTTGAAGAGGAAACACTCAATGAGAAGGAAGTCGGTGGCGGCGGCGACGGCGGCGGTGGCGGTGGAGAAGAAGAAGATGAAGAAAAAGAACAATGTGGTGATTTTGGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGTTAAGTTCATGTGAGAGTACAAGTCCTTTTTAA ATGGAATCCTCTTACTTTTCGTTTTCCGATTCAGATTTCTCGACGGATTCTTCATTCGGATCAACTGAATCATCGTTCTCATGGACTGATTTTTTATCAATCCACAGTGCGCTAGAAAACTCAATCGGAATCGAAGAGTTTCTCGGGAAACAAAAATTGGATTCGGAATCGAAAATCGTAGTGAAAGAAGAAATCGAAGTTAACTCGATCGATTTTAAGGAGGAGAAACAGAGGAAGACGACGGAGAAGAGTTACAGAGGTGTGAGACGGCGGCCATGGGGTAAATACGCGGCGGAGATTAGGGATTCAACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGACAGCGCTGAAGCTGCTGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAACAATGGCGGTGTTGAATTTTCCGGTGGAAATGGTGAGGGAATCATTACAGGATATTGAGTATGAATTGGAAGAGGGATGTTCGCCGGTGGTAGCCTTGAAGAGGAAACACTCAATGAGAAGGAAGTCGGTGGCGGCGGCGACGGCGGCGGTGGCGGTGGAGAAGAAGAAGATGAAGAAAAAGAACAATGTGGTGATTTTGGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGTTAAGTTCATGTGAGAGTACAAGTCCTTTTTAA ATGGAATCCTCTTACTTTTCGTTTTCCGATTCAGATTTCTCGACGGATTCTTCATTCGGATCAACTGAATCATCGTTCTCATGGACTGATTTTTTATCAATCCACAGTGCGCTAGAAAACTCAATCGGAATCGAAGAGTTTCTCGGGAAACAAAAATTGGATTCGGAATCGAAAATCGTAGTGAAAGAAGAAATCGAAGTTAACTCGATCGATTTTAAGGAGGAGAAACAGAGGAAGACGACGGAGAAGAGTTACAGAGGTGTGAGACGGCGGCCATGGGGTAAATACGCGGCGGAGATTAGGGATTCAACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGACAGCGCTGAAGCTGCTGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAACAATGGCGGTGTTGAATTTTCCGGTGGAAATGGTGAGGGAATCATTACAGGATATTGAGTATGAATTGGAAGAGGGATGTTCGCCGGTGGTAGCCTTGAAGAGGAAACACTCAATGAGAAGGAAGTCGGTGGCGGCGGCGACGGCGGCGGTGGCGGTGGAGAAGAAGAAGATGAAGAAAAAGAACAATGTGGTGATTTTGGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGTTAAGTTCATGTGAGAGTACAAGTCCTTTTTAA MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGIEEFLGKQKLDSESKIVVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAAATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSSCESTSPF
BLAST of CsGy3G021650.1 vs. NCBI nr
Match: XP_004151982.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis sativus] >KGN57915.1 hypothetical protein Csa_3G389850 [Cucumis sativus]) HSP 1 Score: 322.8 bits (826), Expect = 9.3e-85 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. NCBI nr
Match: XP_008447432.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo]) HSP 1 Score: 290.4 bits (742), Expect = 5.1e-75 Identity = 191/224 (85.27%), Postives = 197/224 (87.95%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. NCBI nr
Match: XP_023534089.1 (ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 256.1 bits (653), Expect = 1.1e-64 Identity = 171/224 (76.34%), Postives = 184/224 (82.14%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. NCBI nr
Match: XP_022146006.1 (ethylene-responsive transcription factor 1B-like [Momordica charantia]) HSP 1 Score: 253.1 bits (645), Expect = 9.1e-64 Identity = 169/223 (75.78%), Postives = 181/223 (81.17%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. NCBI nr
Match: XP_022963816.1 (ethylene-responsive transcription factor 1B-like [Cucurbita moschata]) HSP 1 Score: 244.6 bits (623), Expect = 3.2e-61 Identity = 172/223 (77.13%), Postives = 179/223 (80.27%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TAIR10
Match: AT3G23240.1 (ethylene response factor 1) HSP 1 Score: 152.5 bits (384), Expect = 3.0e-37 Identity = 89/178 (50.00%), Postives = 112/178 (62.92%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TAIR10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15) HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33 Identity = 72/116 (62.07%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TAIR10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59) HSP 1 Score: 137.1 bits (344), Expect = 1.3e-32 Identity = 71/112 (63.39%), Postives = 92/112 (82.14%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TAIR10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 104.8 bits (260), Expect = 7.2e-23 Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TAIR10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 104.4 bits (259), Expect = 9.5e-23 Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. Swiss-Prot
Match: sp|Q8LDC8|ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2) HSP 1 Score: 152.5 bits (384), Expect = 5.5e-36 Identity = 89/178 (50.00%), Postives = 112/178 (62.92%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. Swiss-Prot
Match: sp|Q8VYM0|ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.1e-32 Identity = 72/116 (62.07%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. Swiss-Prot
Match: sp|Q9LND1|ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.4e-31 Identity = 71/112 (63.39%), Postives = 92/112 (82.14%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. Swiss-Prot
Match: sp|O04681|PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.4e-23 Identity = 52/68 (76.47%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. Swiss-Prot
Match: sp|Q9LSX0|ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21 Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TrEMBL
Match: tr|A0A0A0L7G2|A0A0A0L7G2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G389850 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 6.2e-85 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TrEMBL
Match: tr|A0A1S3BHE9|A0A1S3BHE9_CUCME (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103489880 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 3.4e-75 Identity = 191/224 (85.27%), Postives = 197/224 (87.95%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TrEMBL
Match: tr|A0A2N9IRW2|A0A2N9IRW2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54745 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.8e-43 Identity = 108/174 (62.07%), Postives = 122/174 (70.11%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TrEMBL
Match: tr|A0A2P4MMG2|A0A2P4MMG2_QUESU (Ethylene-responsive transcription factor 1b OS=Quercus suber OX=58331 GN=CFP56_24964 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 5.5e-41 Identity = 120/171 (70.18%), Postives = 137/171 (80.12%), Query Frame = 0
BLAST of CsGy3G021650.1 vs. TrEMBL
Match: tr|A0A2I4F661|A0A2I4F661_9ROSI (ethylene-responsive transcription factor 1B-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108995921 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40 Identity = 105/165 (63.64%), Postives = 115/165 (69.70%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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