CsGy3G021500.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATAGAAATTATTTTCTTTTTCTTTTTTTAAAAAAAGCTTTTGTCATATCCCTACCTCAACTATATATATGAATACAACCAAATCCTTATTCCTTATTACACAACCATTTCTTTTCCCAAACTAAGAAAAATTAGAACCCTTTCCTCTTAGTTCTTTTTTTTTCATTTCCCATCAACATTTTATTCATACCCCAAAAGTTTGAATACCCAGAACTTAATTTGCATTATTATTATTATTATTATTTCTTATTGAGGTAGAAATAATAATAATAATATATATAACTGTAAATATTAATGGGGCTTAAAGATATTGGAGCCTCACTTCCACCAGGGTTTCGATTTTATCCAAGTGATGAAGAATTGGTTTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGTACTCTTGTGGAGATCGATTTGCATACATGTGAGCCATGGCAGCTTCCTGGTACGTTTTTATATTTATATTTCTTGTTTTTTTTTTTTATAATGTAATGTTCAAAAACTTTACCTTTATATAAGTTATTGATTCAAAATAATATGAATATATTATTCTTGGGATCATCTTACTTTTGAAGAGAAGACATGAAAAGAAAGTGATGACTTTAGAGTGGTTTTTTTTTTTTTTTTTTGGGTTATTTGTTCAATAATTACTTTTTATAATCCACTTTTGATATTTGTTTTAGTATATATATTTTTTATAATAATAATGAGTTTCTACAAGTTCTTCATGCACACATATCTTAATTAGCTATTAATAATGTAGGTTTGATTAATGTTTATTAAAAAGCTGAACTTTTTGCATGGTTGGTGAGAACTTGTACTTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGTTGAAAAAAGAAAAGAAAGAAGAAAAGGCTTTTGATTCTTTTGTGTAAAATTTACAAATTAAAACAGAAAATATATGAGAGTTCTGCCTCACAAAGTGGTTTTTATATATTATTGAGCAAAAATCGATCTAATTTTTTGTGTTTTAATTGGTATTACCTTGTCTGTTTGGTGTTTCTTGTTCGTCTGTTTTTTGTAATTTAATTTTGTGATAAATTGGCTAAACCTTGATGTTAAGTGTTTTAATTAAGGCAGAGGAGGATCGAGTTTGGGTTTGCTCTCTTTAATTATCTCTCTTCCACATTAAATATTCTAAGGATCTTTAATTTCTTTCTCCCTCTCCCTCTCCCTCTCCCTCTCTCTCTCTCTCTGTGGTCTCATACAAACATGCATACATTCATGTGAAAACCTTGTCTTTCACCATTTCTTTTTAAAAGATCGAATTCTACATTAATTAAAAAATGTCAATGTAATTAAATAATTAGATACAAAGAAAGAGAAAATAAGGGATCAAAATTGAGAATTTTTTTGTATCAAAATACAAGGAAATATAATATATAAGCTTGGGTGAGTACTAATTGAGGTAGCTTCAACTTATAGAACAAGTCTCATTAATTATTGTTACTCTCTCCAAAGCTGAGAAATATATTCTCCAAAATCTCAATCATTTCAGCTTTCGATACTTCTATCATTCTTCTTTGACTTCATTTCTTTAATTAATTACTTTTCTTTCTTCTACTTCTCTGCACCAATTATATATATCAAATCTTTCTTTCATGCAAAGTATCTATATCTATTATATTTTTAATTTTCTTTCAATCATATCAATTATATAATTTCTAGTATTTGGATTCATACATTTTTCTTTCTCATCCAATCCGATCTAATTTTGTTGTTTATGATCACCAACTAATGTAAATCATTACATTGCTAATCATAAACAAAAATACATTTGAGTCTTTCTTTAAAACACAATGATAATTATTGTAATTTAATATGAAAAAATGACTTTTTTTAATTAATTATTTGATTTAATTAGCAGCCAAACATACTAACAATCAATAATATCAAATCATAGGTGTCATTTTCTTATTCTCTTTCCCCTTCCCCCTCCTTAGTTTCCTTTCTCTTCCATAAATTATTCACAACTTAAATGGAATGAGTTCAATCATATATGGCTAATGAAAACGAAAGATTAATTTAACTAATCAATTTCTTCTCTTTGAAATTTAAGAGGTGGCAAAGTTGAACAGCAATGAGTGGTATTTCTTCAGTTTCAGAGATCGAAAATACGCGACAGGCTTTCGGACCAATCGTGCAACGACATGTGGATATTGGAAAGCGACAGGAAAGGATCGGACGGTGGTGGATCCATCGACAGGGGATATCGTAGGAATGAGAAAAACTTTGGTGTTTTATAAAAATAGAGCTCCAAATGGAATCAAAACTGGATGGATTATGCATGAATTTCGGCTCGAGGCCCCTCATAGGCCCCCAAAGGTTGAATTTTTCATACTTTTCTTTTAAATTTTAATTATCCATTGTTTAGGCCATTTAGACACAAATCCTATGGTGTGAGCACATACACACAATAAAATAAAATATGGTTATTTTTTTAGTCCTTCAATTTGAAAATATTTATATTCATGTGCCCTTAAAGGATAACAACACAAAAGTTGGTGTCTTTTTCCACTTTGGTCATATTCACTTACATAGAGAATAGAAGAGAGATCTCAATTTGATGAACCTTTATTGGTTTATAAATAGTTGCATTAGTAGAGAATATATAATAATATAAATATATATTTTTAAAATTTTTGTTCTTATTTAAAATTAGAAGATACTATTATTATAACGTGCTTTGTTTTGTTTTTGTAAAAGAGAAACTTAGAATCAAAATAACTATGAATGTTATTATTTAAAGTAATGATACAAATAAAAAGTAAAGATAATTTGGAATTATCTCTCTTTTTATTTTTTTCAGTTATAATTGGTTTTATTCAATACATTTTCTGCTTTTGTGTTACATCCATTCACAGATAAAAATTTAATTTCTTAGTCTTTATTTCTTAATATTGTCATTTTCTTTTCCTTCCAAGTTTGAAACTTTTCCTTTTCATTTTAATGTCAGTGAGTTTAATTTTGTGTATTCCATTATAAAGCAGTTACACTCCAAATATAATCACTACTTGAACCATACTTTTTTAATAAAGAAATTAAAAAGAAAAGAAAACTAATTATCATCTCTCTTTTTAAGAATTCCATTCAAGTATAACTTTTCAATTTTGTACTTAAAGCTCTTTTTAACTTTTTTTTTTTCTTTTCTTTTTTAACAATATGAACAGTCAGATTTTTACATGTTCTTCACTTCATTATATAGCTTTTATGCATTGATTTAACAAGAAAATGAATAAACTTTATGTGGGTACAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAGAAGGGGAAGCAAGAAGAGTACAACACCAAACTGATCAATCAACATTTTACGTTTGGAAACTTCGAGCGTGTTCCATCCGTCATCATCCGAGCTCCATCTCCCCTTCCAAGTGACCCGAGCCAGACCACAACGATGCCTTGTGGCTACAATGTTGATATTGATATCACATCATTATCGCCCTCAATGGCTCCCCATAGCCACACAGGCAGTTGTTCTTTTCTCCATCTCCTTCAACTTCCTCGAGACAAAGATGACAACAACAATAATAATAATCCCAAAACTGATCAAATTTTCTGCCCCAAAAATAATGAATCTGATTATGGGGCTTTGTGGGACATGGATTTAGAAGAACATACATTTCAAGATGGCGTGGGATCGAACTTGGATCAAATGGCATTCGACGACGTTGATAGCAGCTTGGTTTTTCTCTAAAAGTTTGTGTGTACTATGCTAAGGCAGATGACTGTATCTGCTACATTGCACATTTCAATATAGGTTTGTTTGTTGATGTATAGTTTATATACTTGTATGATGTATTTGCATTTAGGAGAGTTATTGGGATATTTTGTTGTGTGTTTTCAACAACACACTTAGATTTCATTTTTTTCTTCTTTTTCTTCTTTGGTCTTGTATAGAAAATTAGTCAAATCTGTAATAAATATATTTTAGTTTAAGTGCATATTGTTTGTGGATGTAATAAATTTGTGGTTTTTGATACCACAAATATAGAAATGTTGCATTTTGTGCATGTGATTATAAACAGGATCTGTGTGCCCCTTAAAGCTTAAGGAGATTCATTTGAATCATAATAATTCAAGGGGGAAAAATAGAGGAAGGAGAAATAATGTTAAAAGTTCCTAAGA TATAGAAATTATTTTCTTTTTCTTTTTTTAAAAAAAGCTTTTGTCATATCCCTACCTCAACTATATATATGAATACAACCAAATCCTTATTCCTTATTACACAACCATTTCTTTTCCCAAACTAAGAAAAATTAGAACCCTTTCCTCTTAGTTCTTTTTTTTTCATTTCCCATCAACATTTTATTCATACCCCAAAAGTTTGAATACCCAGAACTTAATTTGCATTATTATTATTATTATTATTTCTTATTGAGGTAGAAATAATAATAATAATATATATAACTGTAAATATTAATGGGGCTTAAAGATATTGGAGCCTCACTTCCACCAGGGTTTCGATTTTATCCAAGTGATGAAGAATTGGTTTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGTACTCTTGTGGAGATCGATTTGCATACATGTGAGCCATGGCAGCTTCCTGAGGTGGCAAAGTTGAACAGCAATGAGTGGTATTTCTTCAGTTTCAGAGATCGAAAATACGCGACAGGCTTTCGGACCAATCGTGCAACGACATGTGGATATTGGAAAGCGACAGGAAAGGATCGGACGGTGGTGGATCCATCGACAGGGGATATCGTAGGAATGAGAAAAACTTTGGTGTTTTATAAAAATAGAGCTCCAAATGGAATCAAAACTGGATGGATTATGCATGAATTTCGGCTCGAGGCCCCTCATAGGCCCCCAAAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAGAAGGGGAAGCAAGAAGAGTACAACACCAAACTGATCAATCAACATTTTACGTTTGGAAACTTCGAGCGTGTTCCATCCGTCATCATCCGAGCTCCATCTCCCCTTCCAAGTGACCCGAGCCAGACCACAACGATGCCTTGTGGCTACAATGTTGATATTGATATCACATCATTATCGCCCTCAATGGCTCCCCATAGCCACACAGGCAGTTGTTCTTTTCTCCATCTCCTTCAACTTCCTCGAGACAAAGATGACAACAACAATAATAATAATCCCAAAACTGATCAAATTTTCTGCCCCAAAAATAATGAATCTGATTATGGGGCTTTGTGGGACATGGATTTAGAAGAACATACATTTCAAGATGGCGTGGGATCGAACTTGGATCAAATGGCATTCGACGACGTTGATAGCAGCTTGGTTTTTCTCTAAAAGTTTGTGTGTACTATGCTAAGGCAGATGACTGTATCTGCTACATTGCACATTTCAATATAGGTTTGTTTGTTGATGTATAGTTTATATACTTGTATGATGTATTTGCATTTAGGAGAGTTATTGGGATATTTTGTTGTGTGTTTTCAACAACACACTTAGATTTCATTTTTTTCTTCTTTTTCTTCTTTGGTCTTGTATAGAAAATTAGTCAAATCTGTAATAAATATATTTTAGTTTAAGTGCATATTGTTTGTGGATGTAATAAATTTGTGGTTTTTGATACCACAAATATAGAAATGTTGCATTTTGTGCATGTGATTATAAACAGGATCTGTGTGCCCCTTAAAGCTTAAGGAGATTCATTTGAATCATAATAATTCAAGGGGGAAAAATAGAGGAAGGAGAAATAATGTTAAAAGTTCCTAAGA ATGGGGCTTAAAGATATTGGAGCCTCACTTCCACCAGGGTTTCGATTTTATCCAAGTGATGAAGAATTGGTTTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGTACTCTTGTGGAGATCGATTTGCATACATGTGAGCCATGGCAGCTTCCTGAGGTGGCAAAGTTGAACAGCAATGAGTGGTATTTCTTCAGTTTCAGAGATCGAAAATACGCGACAGGCTTTCGGACCAATCGTGCAACGACATGTGGATATTGGAAAGCGACAGGAAAGGATCGGACGGTGGTGGATCCATCGACAGGGGATATCGTAGGAATGAGAAAAACTTTGGTGTTTTATAAAAATAGAGCTCCAAATGGAATCAAAACTGGATGGATTATGCATGAATTTCGGCTCGAGGCCCCTCATAGGCCCCCAAAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAGAAGGGGAAGCAAGAAGAGTACAACACCAAACTGATCAATCAACATTTTACGTTTGGAAACTTCGAGCGTGTTCCATCCGTCATCATCCGAGCTCCATCTCCCCTTCCAAGTGACCCGAGCCAGACCACAACGATGCCTTGTGGCTACAATGTTGATATTGATATCACATCATTATCGCCCTCAATGGCTCCCCATAGCCACACAGGCAGTTGTTCTTTTCTCCATCTCCTTCAACTTCCTCGAGACAAAGATGACAACAACAATAATAATAATCCCAAAACTGATCAAATTTTCTGCCCCAAAAATAATGAATCTGATTATGGGGCTTTGTGGGACATGGATTTAGAAGAACATACATTTCAAGATGGCGTGGGATCGAACTTGGATCAAATGGCATTCGACGACGTTGATAGCAGCTTGGTTTTTCTCTAA MGLKDIGASLPPGFRFYPSDEELVCHYLYKKIMNEQVLKGTLVEIDLHTCEPWQLPEVAKLNSNEWYFFSFRDRKYATGFRTNRATTCGYWKATGKDRTVVDPSTGDIVGMRKTLVFYKNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQHFTFGNFERVPSVIIRAPSPLPSDPSQTTTMPCGYNVDIDITSLSPSMAPHSHTGSCSFLHLLQLPRDKDDNNNNNNPKTDQIFCPKNNESDYGALWDMDLEEHTFQDGVGSNLDQMAFDDVDSSLVFL
BLAST of CsGy3G021500.1 vs. NCBI nr
Match: XP_004152054.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3 [Cucumis sativus] >KGN57897.1 hypothetical protein Csa_3G379740 [Cucumis sativus]) HSP 1 Score: 533.9 bits (1374), Expect = 3.5e-148 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. NCBI nr
Match: XP_008447414.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo]) HSP 1 Score: 501.9 bits (1291), Expect = 1.5e-138 Identity = 287/307 (93.49%), Postives = 289/307 (94.14%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. NCBI nr
Match: XP_023554678.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127 Identity = 228/299 (76.25%), Postives = 240/299 (80.27%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. NCBI nr
Match: XP_022963542.1 (NAC domain-containing protein 21/22-like [Cucurbita moschata]) HSP 1 Score: 461.8 bits (1187), Expect = 1.7e-126 Identity = 226/299 (75.59%), Postives = 239/299 (79.93%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. NCBI nr
Match: XP_022967434.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita maxima]) HSP 1 Score: 461.5 bits (1186), Expect = 2.2e-126 Identity = 227/299 (75.92%), Postives = 239/299 (79.93%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TAIR10
Match: AT4G28530.1 (NAC domain containing protein 74) HSP 1 Score: 274.2 bits (700), Expect = 9.2e-74 Identity = 127/174 (72.99%), Postives = 141/174 (81.03%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TAIR10
Match: AT1G76420.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 205.7 bits (522), Expect = 4.0e-53 Identity = 94/167 (56.29%), Postives = 118/167 (70.66%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TAIR10
Match: AT1G56010.2 (NAC domain containing protein 1) HSP 1 Score: 205.3 bits (521), Expect = 5.2e-53 Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TAIR10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 201.1 bits (510), Expect = 9.9e-52 Identity = 101/209 (48.33%), Postives = 123/209 (58.85%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TAIR10
Match: AT3G12977.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 198.0 bits (502), Expect = 8.4e-51 Identity = 87/156 (55.77%), Postives = 113/156 (72.44%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. Swiss-Prot
Match: sp|Q9S851|NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 7.2e-52 Identity = 94/167 (56.29%), Postives = 118/167 (70.66%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. Swiss-Prot
Match: sp|Q84TE6|NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana OX=3702 GN=NAC021 PE=1 SV=2) HSP 1 Score: 205.3 bits (521), Expect = 9.4e-52 Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. Swiss-Prot
Match: sp|O04017|NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.8e-50 Identity = 101/209 (48.33%), Postives = 123/209 (58.85%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. Swiss-Prot
Match: sp|Q9FLJ2|NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 4.9e-48 Identity = 87/153 (56.86%), Postives = 111/153 (72.55%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. Swiss-Prot
Match: sp|Q9FKA0|NAC92_ARATH (NAC domain-containing protein 92 OS=Arabidopsis thaliana OX=3702 GN=NAC92 PE=1 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.4e-47 Identity = 86/153 (56.21%), Postives = 106/153 (69.28%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TrEMBL
Match: tr|A0A0A0LB56|A0A0A0LB56_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379740 PE=4 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 2.3e-148 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TrEMBL
Match: tr|A0A1S3BIA3|A0A1S3BIA3_CUCME (protein CUP-SHAPED COTYLEDON 3-like OS=Cucumis melo OX=3656 GN=LOC103489866 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 9.9e-139 Identity = 287/307 (93.49%), Postives = 289/307 (94.14%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TrEMBL
Match: tr|A0A0B2SVP1|A0A0B2SVP1_GLYSO (NAC domain-containing protein 21/22 OS=Glycine soja OX=3848 GN=glysoja_025297 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 4.8e-93 Identity = 221/303 (72.94%), Postives = 245/303 (80.86%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TrEMBL
Match: tr|M5W1G4|M5W1G4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G221900 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 8.2e-93 Identity = 176/298 (59.06%), Postives = 198/298 (66.44%), Query Frame = 0
BLAST of CsGy3G021500.1 vs. TrEMBL
Match: tr|I1L8E7|I1L8E7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100783645 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 2.4e-92 Identity = 208/301 (69.10%), Postives = 231/301 (76.74%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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