CsGy3G020900.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTGTGGTAAATTAAGGGAGACATCTATATTATATAAGTTTGATATCAAGTTTTTTATTATAAAAAAATTCCAAAGACTAATAAACAAAATAGCCAATTTTAAAGAATCGTAGAGATATATAGATGACATTGTTTATCTTTACAAACTCATATTAGATTTATTATCTAAACCTAGGTTTGTTTTCCTTGTCAAGTTGTATAAGAGCCACACTAATAGAAAAATAGTTTTACGTATATCTTTATTGAGAGGAAGACTTTTAAGTGGTTTGAAAAACAAGGCTATTGAGAACGTATTATGTCTCAAGCAGATAATGTAATATTATTATGAAGGTATATGAAAAGGGTTCGTAGTCAACATGAACGTGGCCAAACCAATTGAATATAACATTTGCTCCTATTGGATTTACTAAAAGTTACTTTTTCTTTATTAACTCCAATTCTTGGATTATAAAGTTTTGCTTTTTAAATTTTTTTATTGGTAGGTATCCCGGCAGAAGTAAAGACAAGGCTACTTGTGGATGAACCTAACAAAGCAGTAATATTTGAATGTGTTGAAGGAGATCTATTAAAAGACTTTGAAATGTTCCAAGTGAAAGTTGAAGTTAGAGATGGTGGTAAAAATGGTGTTAGCTCAGTTAAATGGTCAGTGGGATTTATGAAGGCAAATGAAGATGTGGCTCCACCACATAACTATCTCCAATTTGGAGTGAAAGTGTGCAAAGGCCTTGATGCTTACCTTTCCAAACAAATAATGAACTAA ATGGATTGTGGTATCCCGGCAGAAGTAAAGACAAGGCTACTTGTGGATGAACCTAACAAAGCAGTAATATTTGAATGTGTTGAAGGAGATCTATTAAAAGACTTTGAAATGTTCCAAGTGAAAGTTGAAGTTAGAGATGGTGGTAAAAATGGTGTTAGCTCAGTTAAATGGTCAGTGGGATTTATGAAGGCAAATGAAGATGTGGCTCCACCACATAACTATCTCCAATTTGGAGTGAAAGTGTGCAAAGGCCTTGATGCTTACCTTTCCAAACAAATAATGAACTAA ATGGATTGTGGTATCCCGGCAGAAGTAAAGACAAGGCTACTTGTGGATGAACCTAACAAAGCAGTAATATTTGAATGTGTTGAAGGAGATCTATTAAAAGACTTTGAAATGTTCCAAGTGAAAGTTGAAGTTAGAGATGGTGGTAAAAATGGTGTTAGCTCAGTTAAATGGTCAGTGGGATTTATGAAGGCAAATGAAGATGTGGCTCCACCACATAACTATCTCCAATTTGGAGTGAAAGTGTGCAAAGGCCTTGATGCTTACCTTTCCAAACAAATAATGAACTAA MDCGIPAEVKTRLLVDEPNKAVIFECVEGDLLKDFEMFQVKVEVRDGGKNGVSSVKWSVGFMKANEDVAPPHNYLQFGVKVCKGLDAYLSKQIMN
BLAST of CsGy3G020900.1 vs. NCBI nr
Match: XP_011651403.1 (PREDICTED: major latex protein 15-like [Cucumis sativus]) HSP 1 Score: 194.5 bits (493), Expect = 1.6e-46 Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. NCBI nr
Match: XP_008457056.1 (PREDICTED: major latex protein 15-like [Cucumis melo]) HSP 1 Score: 194.5 bits (493), Expect = 1.6e-46 Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. NCBI nr
Match: KGN57828.1 (hypothetical protein Csa_3G334350 [Cucumis sativus]) HSP 1 Score: 192.6 bits (488), Expect = 6.2e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. NCBI nr
Match: XP_022143410.1 (kirola-like [Momordica charantia]) HSP 1 Score: 153.3 bits (386), Expect = 4.2e-34 Identity = 69/89 (77.53%), Postives = 80/89 (89.89%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. NCBI nr
Match: XP_022143318.1 (LOW QUALITY PROTEIN: major latex protein 149-like [Momordica charantia]) HSP 1 Score: 137.1 bits (344), Expect = 3.1e-29 Identity = 60/94 (63.83%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TAIR10
Match: AT1G70850.1 (MLP-like protein 34) HSP 1 Score: 59.3 bits (142), Expect = 1.5e-09 Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TAIR10
Match: AT1G70830.1 (MLP-like protein 28) HSP 1 Score: 57.0 bits (136), Expect = 7.3e-09 Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TAIR10
Match: AT1G70840.1 (MLP-like protein 31) HSP 1 Score: 56.6 bits (135), Expect = 9.6e-09 Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TAIR10
Match: AT1G23120.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 54.3 bits (129), Expect = 4.8e-08 Identity = 27/82 (32.93%), Postives = 47/82 (57.32%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TAIR10
Match: AT5G28010.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 53.9 bits (128), Expect = 6.2e-08 Identity = 28/83 (33.73%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. Swiss-Prot
Match: sp|Q9SSK7|MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-08 Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. Swiss-Prot
Match: sp|Q9SSK9|MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-07 Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. Swiss-Prot
Match: sp|Q941R6|MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-07 Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. Swiss-Prot
Match: sp|Q06394|ML146_PAPSO (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.1e-04 Identity = 22/86 (25.58%), Postives = 39/86 (45.35%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TrEMBL
Match: tr|A0A1S3C5B3|A0A1S3C5B3_CUCME (major latex protein 15-like OS=Cucumis melo OX=3656 GN=LOC103496826 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.1e-46 Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TrEMBL
Match: tr|A0A0A0L7P3|A0A0A0L7P3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G334350 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 4.1e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TrEMBL
Match: tr|A0A0A0LA17|A0A0A0LA17_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G321300 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-27 Identity = 57/87 (65.52%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TrEMBL
Match: tr|A0A1S3CQL5|A0A1S3CQL5_CUCME (MLP-like protein 28 OS=Cucumis melo OX=3656 GN=LOC103503185 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 6.1e-26 Identity = 54/86 (62.79%), Postives = 71/86 (82.56%), Query Frame = 0
BLAST of CsGy3G020900.1 vs. TrEMBL
Match: tr|A0A0A0L7N6|A0A0A0L7N6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G331330 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 8.0e-26 Identity = 53/86 (61.63%), Postives = 71/86 (82.56%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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