CsGy3G019670.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATATGCTCTAATCCCAACCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTTTTATTTATTTTTTTTAATTAAGGTCATAATCCCTCTAATTAATTTTTTATTTATCTGTTTCAATCCTGATTGTTCAAGAAATAATTCAATTTAATTGAAGTTTTTTCTTGAAGGGGTGTGAGAATTAAATGGGGAAGAAAGGAACGGGCTGGTTCTCCACTGTGAAGAAAGTCTTCAAATCCAACAACACTCCTTCTTCCAAGGACTACTCACCTCACTCATTGCTCAACAAGGTTTCTTTTTTTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTTTCATTTTTTTGATAAATTAATTATTGACTAGTCTATATATCTCATCATCAAGAAAAACATACTTAGGTACATCATCTTAACTCATCTAAATATTAAAAAAAAAGAAAAATAATAAGTTGTCATATAACCAACTTTTATTTTGGTCATGGATGGAAATACACGTAGAGATTAAGGTAGTTTGAGTGGTAGGGTTAGTTTAAAATTAATTAGTACATAAAGAATTAATTAGTACATAGAGATTTATGTGGCCCAACGTACCCTAGTTAATAGGTAATGTACATTGGGAAATTTTGGCAACCTTGGGATTTGTATTTTAGAACTGAATTACTCACTTTTCATGGTTCATTAGTGTGATAGATAAGCATATAGATTGAGAGTGTCTTTTAGTAGTTGGGGTTTGTGCTTTTCTTTTGCTTGAAGAAAAAGATGAAATAACTTGATTGTAGATGAAGAAAAAGCCATTTTGAGAATAAAGGGCAATGAGAATAGAGAAGAATAATATATAATGAATTAAAATAGAAAATTGATTTATTTATATATTGAAATTTACAGCCATGCATGAATAAGAGAGAAGGGAAGGAAAAAAAATTAATGAAGTTAGTGTGGTTTTGGTCCCCCATTGGGTAAGAAGGACCAAAATGTAAATCATATAACATTTTTATATTTTTGTGTTTTGTCTCATAAACCTTCTTAAGCTTTATATCTATCACTATCATTTATCTTCACCCATCATGTGCATGTTGGTGCTAGATCTCCATCATCTTTCATATACATTTTGTCTCTTTTCTTTCAACCAATTTTGTGTTACATGTATATATAAATAAGTGTCTTTGATGAATGATGTTCTGTTTTTTTTTTCTCCCTTTCTATTATCATAATTTGTTTTCTTCAATCAAGTTTGGTAAAAAAAAATATACATGGGAGAAAAATGTAGAATACGTTAATAAGAATCTCATTTTCTAGAATGAAAATTCATATTAATTATTATTCTAATAAACGTGAACATGATTTAATTGATATAAAATATTTGAATTTTAGAAGTTTATGATTTCCACACCATGCATGTGTTGAAAACATCTAGAAGCCTTTCTTGAATTAGTATATGCATAATGATATAAATGTGTAAACTAAGTTTTTTTTTAGAATTGTGTTGAAATACGTAAATTATAAATAAATACCTTGTTTCTAGAAGTGTCCTGTAATTTGTTTAGGTTCAAAAATTGTTGTAAGAGAAAATCTTTAGGTAAGAAATATAATCAAGAAAATGTTTAGAATAATATTTATAAAATTCAAAAAGAGCATTAAAAAGTTATTTTTATTTGAACTATGTCTATAAATAAAAATTGTGGCACCATATATGAGCCAAGCAAACAAAGCAAGAAAGTTGGGCAAACTTCTTAAGTAAAAAGTGAGAGAGTTTTGAGAGTGAAAAAGTACATATTCTCTCTAAAGTATCCATTATGATCTTATCTTTTATCTTAACTAGTACATTCTTAATAAAAATTATTTTCTTCTAATTGGTTCTCTTTCTTTCTTGTGGGTAAATTTTCTCAACGCATTCATGATTCTTTTAAAATGTTTAGATAAAAATAATAAACTACATATATATTTTTTTTGAGGTATTGGTGATAAATTATTTAACGAAACTATAACTATAATATTTTAATTAAAACTCTTTCATGTTGGTCTAAAAGTGTAATTTATATCGATAAAATCTTATATGAACAAAATTTTGCAGAAGGAAAGTGCGAATCTGGAAAAATGGCAGCACAATGCTCCAGAAGTCATATCATTTGAACAATTTCCAACAGAAATTTCGACAGAAATAACGAACGATGAGAGCGTTCAATCGACACCAAAGATTATTGAAGGTCGAGATCATGCTATTGTCGTTGCAGCAGCAACTGCGGCGGCTGCAGAAGCTGCAGTTGCCGCTGCTGAGGCAGCAGCAAAAGTAGTTCGCTTGGCTGGTTATGGATGGCAATCTAGAGAAGATAGAGCAGCAACTCTTATTCAAGCTTATTATAGAGGCTACTTGGTATGTGTGATGATGAGATTTTTTCAATTTAATTTGAACTTTTTAATTAAGAAACAATTGGTTCATTACCTCCTAACATAAAATTTTTATATTTATCTTTTAAGAAGATGACTTATACTCTTTAAAACTTTAAATGCGTTGAAACTTCAAATTCCCTTACATTCTCATGCAAGTATGTGTTATATGTTGTTGGTTATAGGCTCGACGAGCTCTTCGTGCTTTAAAGGGACTGGTAAGATTGCAAGCGTTGGTCCGAGGCCACAATGTTCGAAAGCAAGCACAAATGACAATGCGTTGCATGCAAGCTCTGGTGCGAGTGCAAGCAAGAGTCCGTGCTCGTAGGTTGCAATTGGCCAACCAAAATTATAATAAAAGAATTGTAGAACAAGATAATGATAACGAAGATGAAGAAGAAAAGCTATTGCAAAACAAATTAAAGAAGTATGAGATGGAAAGTTGGGATGGTAGGGTTTTAAGTGTAGAGAAAATCAAAGAAAATTCTTCGAGAAAACGTGATGCTTTAATGAAAAGGGAAAGGGCTCTTGCTTATGCATATTCATATCAGGTTTGTCTCCAGACATATATATGTTTTTCTTTTCCTTTTTCTTCATTTGAACTTTTTTGATATCTTAAACAAGTTATATTTTGATAGCAGCAACATCAAAGAAGACAAGATGAAGAAGGAGTTTTACAATTGGGTGAAGATGTGAATGATTTAGGGTTTAGGCATGAGAAGGGCGAATATGGTTGGAATTGGCTTGAGCATTGGATGTCTTCTCAACCATATAATAATGTTCGTCAATCCACAACACGTGAGTCTTATATCACACCTACCACCGTCACCACAGCCACAGACGACATGTCAGAGAAGACGGTTGAAATGGATCCAACTCAACTAAATTTGGACTCTTTCGACCTAGGACAAGTAGGCGGCCCATACTCATCTCGACAATCGATTTCAAAAAATGTTCCAAGTTACATGGCTTCAACCCAATCTGCTAAGGCCAAGGTAAGAAACCAAGGCGTGGTAAAACATCAAGGACCAAAATGGAACAAAGCAATGAGAAGAGGATCGGTATTTGGGTCGGGTTGTGACTCATCGAGTTCAGGTGGAGGAACGATGACGTACCAAGGTCAAAGAAGCCCAATCCCAATGAACAATGGGCCTCGCTTGTCTCCTATACACGTAATGGGCTGTGGCCCAGACTACCCAGGAGGTGAAGATTGGGCCCTTCCACCCCTTGGTGTCAATAGTCGTTGGAGAGCTGGTTTTGCTTGAATCACTTTCATTTCCAATCCCTTGTATGTTTAATAACTGAATTATCGAACTTTGCCTGTTCATACATTTCTATTTATTAACTTCAGAAATTGTGTTAAATCCACCTTATATACTTTTTAAAAAATGTCCCAAATACCTTTTATCTTTTTTCATTTCTCAAATAACTTTGTTCTTATTATTATTTTTTCATTTTGACAATGGGCAAACAAGTTGTTTTCTTTTTAACATCATTTACTGATGATACAAATAAATTGTTTT AATATGCTCTAATCCCAACCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTTTTATTTATTTTTTTTAATTAAGGTCATAATCCCTCTAATTAATTTTTTATTTATCTGTTTCAATCCTGATTGTTCAAGAAATAATTCAATTTAATTGAAGTTTTTTCTTGAAGGGGTGTGAGAATTAAATGGGGAAGAAAGGAACGGGCTGGTTCTCCACTGTGAAGAAAGTCTTCAAATCCAACAACACTCCTTCTTCCAAGGACTACTCACCTCACTCATTGCTCAACAAGAAGGAAAGTGCGAATCTGGAAAAATGGCAGCACAATGCTCCAGAAGTCATATCATTTGAACAATTTCCAACAGAAATTTCGACAGAAATAACGAACGATGAGAGCGTTCAATCGACACCAAAGATTATTGAAGGTCGAGATCATGCTATTGTCGTTGCAGCAGCAACTGCGGCGGCTGCAGAAGCTGCAGTTGCCGCTGCTGAGGCAGCAGCAAAAGTAGTTCGCTTGGCTGGTTATGGATGGCAATCTAGAGAAGATAGAGCAGCAACTCTTATTCAAGCTTATTATAGAGGCTACTTGGCTCGACGAGCTCTTCGTGCTTTAAAGGGACTGGTAAGATTGCAAGCGTTGGTCCGAGGCCACAATGTTCGAAAGCAAGCACAAATGACAATGCGTTGCATGCAAGCTCTGGTGCGAGTGCAAGCAAGAGTCCGTGCTCGTAGGTTGCAATTGGCCAACCAAAATTATAATAAAAGAATTGTAGAACAAGATAATGATAACGAAGATGAAGAAGAAAAGCTATTGCAAAACAAATTAAAGAAGTATGAGATGGAAAGTTGGGATGGTAGGGTTTTAAGTGTAGAGAAAATCAAAGAAAATTCTTCGAGAAAACGTGATGCTTTAATGAAAAGGGAAAGGGCTCTTGCTTATGCATATTCATATCAGCAACATCAAAGAAGACAAGATGAAGAAGGAGTTTTACAATTGGGTGAAGATGTGAATGATTTAGGGTTTAGGCATGAGAAGGGCGAATATGGTTGGAATTGGCTTGAGCATTGGATGTCTTCTCAACCATATAATAATGTTCGTCAATCCACAACACGTGAGTCTTATATCACACCTACCACCGTCACCACAGCCACAGACGACATGTCAGAGAAGACGGTTGAAATGGATCCAACTCAACTAAATTTGGACTCTTTCGACCTAGGACAAGTAGGCGGCCCATACTCATCTCGACAATCGATTTCAAAAAATGTTCCAAGTTACATGGCTTCAACCCAATCTGCTAAGGCCAAGGTAAGAAACCAAGGCGTGGTAAAACATCAAGGACCAAAATGGAACAAAGCAATGAGAAGAGGATCGGTATTTGGGTCGGGTTGTGACTCATCGAGTTCAGGTGGAGGAACGATGACGTACCAAGGTCAAAGAAGCCCAATCCCAATGAACAATGGGCCTCGCTTGTCTCCTATACACGTAATGGGCTGTGGCCCAGACTACCCAGGAGGTGAAGATTGGGCCCTTCCACCCCTTGGTGTCAATAGTCGTTGGAGAGCTGGTTTTGCTTGAATCACTTTCATTTCCAATCCCTTGTATGTTTAATAACTGAATTATCGAACTTTGCCTGTTCATACATTTCTATTTATTAACTTCAGAAATTGTGTTAAATCCACCTTATATACTTTTTAAAAAATGTCCCAAATACCTTTTATCTTTTTTCATTTCTCAAATAACTTTGTTCTTATTATTATTTTTTCATTTTGACAATGGGCAAACAAGTTGTTTTCTTTTTAACATCATTTACTGATGATACAAATAAATTGTTTT ATGGGGAAGAAAGGAACGGGCTGGTTCTCCACTGTGAAGAAAGTCTTCAAATCCAACAACACTCCTTCTTCCAAGGACTACTCACCTCACTCATTGCTCAACAAGAAGGAAAGTGCGAATCTGGAAAAATGGCAGCACAATGCTCCAGAAGTCATATCATTTGAACAATTTCCAACAGAAATTTCGACAGAAATAACGAACGATGAGAGCGTTCAATCGACACCAAAGATTATTGAAGGTCGAGATCATGCTATTGTCGTTGCAGCAGCAACTGCGGCGGCTGCAGAAGCTGCAGTTGCCGCTGCTGAGGCAGCAGCAAAAGTAGTTCGCTTGGCTGGTTATGGATGGCAATCTAGAGAAGATAGAGCAGCAACTCTTATTCAAGCTTATTATAGAGGCTACTTGGCTCGACGAGCTCTTCGTGCTTTAAAGGGACTGGTAAGATTGCAAGCGTTGGTCCGAGGCCACAATGTTCGAAAGCAAGCACAAATGACAATGCGTTGCATGCAAGCTCTGGTGCGAGTGCAAGCAAGAGTCCGTGCTCGTAGGTTGCAATTGGCCAACCAAAATTATAATAAAAGAATTGTAGAACAAGATAATGATAACGAAGATGAAGAAGAAAAGCTATTGCAAAACAAATTAAAGAAGTATGAGATGGAAAGTTGGGATGGTAGGGTTTTAAGTGTAGAGAAAATCAAAGAAAATTCTTCGAGAAAACGTGATGCTTTAATGAAAAGGGAAAGGGCTCTTGCTTATGCATATTCATATCAGCAACATCAAAGAAGACAAGATGAAGAAGGAGTTTTACAATTGGGTGAAGATGTGAATGATTTAGGGTTTAGGCATGAGAAGGGCGAATATGGTTGGAATTGGCTTGAGCATTGGATGTCTTCTCAACCATATAATAATGTTCGTCAATCCACAACACGTGAGTCTTATATCACACCTACCACCGTCACCACAGCCACAGACGACATGTCAGAGAAGACGGTTGAAATGGATCCAACTCAACTAAATTTGGACTCTTTCGACCTAGGACAAGTAGGCGGCCCATACTCATCTCGACAATCGATTTCAAAAAATGTTCCAAGTTACATGGCTTCAACCCAATCTGCTAAGGCCAAGGTAAGAAACCAAGGCGTGGTAAAACATCAAGGACCAAAATGGAACAAAGCAATGAGAAGAGGATCGGTATTTGGGTCGGGTTGTGACTCATCGAGTTCAGGTGGAGGAACGATGACGTACCAAGGTCAAAGAAGCCCAATCCCAATGAACAATGGGCCTCGCTTGTCTCCTATACACGTAATGGGCTGTGGCCCAGACTACCCAGGAGGTGAAGATTGGGCCCTTCCACCCCTTGGTGTCAATAGTCGTTGGAGAGCTGGTTTTGCTTGA MGKKGTGWFSTVKKVFKSNNTPSSKDYSPHSLLNKKESANLEKWQHNAPEVISFEQFPTEISTEITNDESVQSTPKIIEGRDHAIVVAAATAAAAEAAVAAAEAAAKVVRLAGYGWQSREDRAATLIQAYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLANQNYNKRIVEQDNDNEDEEEKLLQNKLKKYEMESWDGRVLSVEKIKENSSRKRDALMKRERALAYAYSYQQHQRRQDEEGVLQLGEDVNDLGFRHEKGEYGWNWLEHWMSSQPYNNVRQSTTRESYITPTTVTTATDDMSEKTVEMDPTQLNLDSFDLGQVGGPYSSRQSISKNVPSYMASTQSAKAKVRNQGVVKHQGPKWNKAMRRGSVFGSGCDSSSSGGGTMTYQGQRSPIPMNNGPRLSPIHVMGCGPDYPGGEDWALPPLGVNSRWRAGFA
BLAST of CsGy3G019670.1 vs. NCBI nr
Match: XP_011651324.1 (PREDICTED: protein IQ-DOMAIN 1 isoform X2 [Cucumis sativus] >KGN57664.1 hypothetical protein Csa_3G239280 [Cucumis sativus]) HSP 1 Score: 757.3 bits (1954), Expect = 3.1e-215 Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. NCBI nr
Match: XP_011651321.1 (PREDICTED: protein IQ-DOMAIN 1 isoform X1 [Cucumis sativus] >XP_004146268.2 PREDICTED: protein IQ-DOMAIN 1 isoform X1 [Cucumis sativus] >XP_011651322.1 PREDICTED: protein IQ-DOMAIN 1 isoform X1 [Cucumis sativus] >XP_011651323.1 PREDICTED: protein IQ-DOMAIN 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 745.3 bits (1923), Expect = 1.2e-211 Identity = 461/465 (99.14%), Postives = 461/465 (99.14%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. NCBI nr
Match: XP_008466830.1 (PREDICTED: protein IQ-DOMAIN 1 [Cucumis melo] >ADN33745.1 hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 613.6 bits (1581), Expect = 5.5e-172 Identity = 407/471 (86.41%), Postives = 421/471 (89.38%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. NCBI nr
Match: XP_022923032.1 (protein IQ-DOMAIN 1-like [Cucurbita moschata]) HSP 1 Score: 518.1 bits (1333), Expect = 3.1e-143 Identity = 359/468 (76.71%), Postives = 394/468 (84.19%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. NCBI nr
Match: XP_022984502.1 (protein IQ-DOMAIN 1-like [Cucurbita maxima] >XP_022984503.1 protein IQ-DOMAIN 1-like [Cucurbita maxima] >XP_022984504.1 protein IQ-DOMAIN 1-like [Cucurbita maxima]) HSP 1 Score: 512.3 bits (1318), Expect = 1.7e-141 Identity = 359/469 (76.55%), Postives = 391/469 (83.37%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TAIR10
Match: AT3G49260.3 (IQ-domain 21) HSP 1 Score: 174.1 bits (440), Expect = 2.0e-43 Identity = 222/467 (47.54%), Postives = 264/467 (56.53%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TAIR10
Match: AT4G00820.1 (IQ-domain 17) HSP 1 Score: 72.4 bits (176), Expect = 8.3e-13 Identity = 68/228 (29.82%), Postives = 101/228 (44.30%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TAIR10
Match: AT1G01110.2 (IQ-domain 18) HSP 1 Score: 70.5 bits (171), Expect = 3.1e-12 Identity = 63/230 (27.39%), Postives = 102/230 (44.35%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TAIR10
Match: AT2G26180.1 (IQ-domain 6) HSP 1 Score: 69.7 bits (169), Expect = 5.3e-12 Identity = 82/199 (41.21%), Postives = 107/199 (53.77%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TAIR10
Match: AT5G03040.1 (IQ-domain 2) HSP 1 Score: 69.7 bits (169), Expect = 5.3e-12 Identity = 79/308 (25.65%), Postives = 120/308 (38.96%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. Swiss-Prot
Match: sp|Q8L4D8|IQD31_ARATH (Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana OX=3702 GN=IQD31 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 6.5e-07 Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. Swiss-Prot
Match: sp|Q9SF32|IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana OX=3702 GN=IQD1 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 3.0e-04 Identity = 45/202 (22.28%), Postives = 81/202 (40.10%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. Swiss-Prot
Match: sp|Q8LPG9|IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana OX=3702 GN=IQD14 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.9e-04 Identity = 72/293 (24.57%), Postives = 111/293 (37.88%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TrEMBL
Match: tr|A0A0A0L9K6|A0A0A0L9K6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239280 PE=4 SV=1) HSP 1 Score: 757.3 bits (1954), Expect = 2.0e-215 Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TrEMBL
Match: tr|A0A1S3CS59|A0A1S3CS59_CUCME (protein IQ-DOMAIN 1 OS=Cucumis melo OX=3656 GN=LOC103504142 PE=4 SV=1) HSP 1 Score: 613.6 bits (1581), Expect = 3.6e-172 Identity = 407/471 (86.41%), Postives = 421/471 (89.38%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TrEMBL
Match: tr|E5GBA3|E5GBA3_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 613.6 bits (1581), Expect = 3.6e-172 Identity = 407/471 (86.41%), Postives = 421/471 (89.38%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TrEMBL
Match: tr|A0A2N9IVU4|A0A2N9IVU4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56135 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 9.2e-83 Identity = 259/468 (55.34%), Postives = 306/468 (65.38%), Query Frame = 0
BLAST of CsGy3G019670.1 vs. TrEMBL
Match: tr|A0A2K1XGC5|A0A2K1XGC5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G012500v3 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.5e-80 Identity = 264/481 (54.89%), Postives = 311/481 (64.66%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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